TCONS_00025708 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025708
Unique NameTCONS_00025708
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3273

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025708 ID=TCONS_00025708|Name=TCONS_00025708|organism=Clytia hemisphaerica|type=transcript|length=3273bp
cggggggtaaatttgctctgtccgggggtaatttggggtgtccggggggt
cagcagatgcttgtccggggggtaaaacctattgtccgggggggcaaaag
tcaccctgttcggggggtaaatcactaaaaattgttatatcctccacccc
ccatgtacaatttttttctgaaagagcccAATTTGAGATAAGTTGGTGGC
TATAATATTCATGTTTATTCACTATCGTAGAAATAATTATTGAGATGTTA
GATAAATCATATCgtgaagtacacgttttttataggaacatccaaaattt
ttgaaggatgttcttaacttctttagttttaagcctaaaaatgttcttaa
catgttcttattttcaccattttttgagcatttttgtccattttcctaag
aaactgGGTATTCTAGAgtcccaaagccttaaaatgttcttaacttgttc
ttaacatttttgccatcgaagccttatgttctgatatattttgtttttct
aagaaaacgTGATTCGTACAGTACGATAAGACTGAAACAGAAAAACTTTC
AACAAAGCTTTCCAGCTCATGTTCAGCACTTCTATTTTAAGTTAGTAAAA
TGTTTgatctttttgtttcttttctttttcattttgacaACAACAAacga
aacaaacaaaacaaaatgaaagaacAGATGTTTCAATATTGTGATGGTGA
ACTTTCAATATGGTTGAAATATGCTGTTGTTGGTGGGTGTATGAAGAATG
CTTTTTAGCCGCAAGGGCATCGGATTTCTTTTCAAGACATTGATATTTTT
GGTGATAACAAGCATTTTGTTTGGTGTATGGAAAGAACCctcttttcaac
atctctttcGAAGACAAATCAAAGTAACCAATCAACTAGCTGGACATGTT
GATGGTGGATCAACCGAACTGCAATCGGCAGAACATCCAGATGAAGGCGA
AAACGAGGTCCAAGAAGACAATATACAAACGATCTCAAAATGTGCTTTCA
ATTCCTTGGATGTGAACCAACCTCGTCCAAACATCTCATCATCTCAAACA
ACCAAATGTCGTTCTATAATCCCAACAGAGGAGGAGTGCTTACATGCTGA
ATATCAGTATGGTGTCACTAAAAAGACTTCCCCGATGTTCTCCACCTGTC
GGCCTTTCAACAACTACCAAACCATTGCTGATTTATGCcgtttcaaaaaa
gaaaatgaccgATATCGAGTCATTTGTGACGTCAAACCATGCAATGGAGG
TACAATCCGAATCGGTTTCTTTCAACGAGAGACCGGATTCATCAAGTTTT
CCACGGCAGATAattataaagcaaaaagtaagcTGGAAAAAGCGATTTGG
AGTATATATAACGTTCACAAAtcgaaagtgaatttttgtttgTTAGCTTG
CTTCAGTGATCCGAACTTCATCAAACAAGCTGTTGTTTTTCCTCCGAGAC
TATTGAAACGAAAAGTGGGACCCAAGCCTCCAGACCATGACAACAAAATC
AATATAAATATCCTGCTATTAGACTCTGTCTCTAGACAACATTTTTATCG
AAAGCTACCAGCTACTGCCGAGGCTATACGTGAAATTAAGGTAACCAAAG
AGAGCAAAATATACGATTTCGAGTTCTTTCAAAGTATAGCACCTAGAACG
TTCCCAAATGTACGTGCTTTATTTAGTGGCAAAGTAGACATCGACGCAAA
CGACGAGGAACTAGACTATCATCTTGAGAACCTTACCGGATATTTTCGTA
ATCTTGGTTATCAAAATATCTTACAAGAAGATAGCTGTTGGTTCGACGTT
TGGGGTTCTCTagtcacaaacaacaaacataTGGAAAATGTTTCTCAAAA
CTGGAAATCGATCCGTGAAAAAATAGACCAGTTACCGATCGATAGCTTAG
GAGTTAGTCATCTCTCTTGTGAAGCTTTTCAACAATATGGGAAAACAAAT
CAATTTAACAATCCACCAAAAGTATGCTATAACGGTTATCTATTGCCATC
CTATTATTTGAACTTGACATTTGAATACTTTCGAGAGATTGAATCTAGTC
CTTTTCGTTCAACTTcgaaacctgttttcatgtaCACTCATTTGAATACA
GCGCACGAGTCGACAGGAAAACGTGTCGCCCAGATGGATTACCTGCTAGC
AGGCTATGTTCGTAAAATGAACGCGTTGGAAAACACATGGACGATCATTT
TATCCGACCACGGACCTAAAACGACGAAATATGCTCAACAACATTTAGCA
GGACGCCTAGAAATAGGTCATGCTGCAATGTTTTTGATCGTTCCACGGAA
AGTTCAGGATTTTCTTGGGGTTGAACGTTTAAAAGCTTTGGAAATTAACC
AAAAGATTTTATCAAGTCATCTAGATTTGCATCATGCTTTGAAAACTCTG
TATTCGAAATCTGCTGGCGGATTGCTTAGACTTTTACCAAATAACCGTTT
TTGTGGCCATGTCCCTATGTACTCTTTTATGAATTGTTTGTGTAACGGTG
GCACGAAAATTCGAACACAATCTGAACCTTTCCATTGGATAGCTGAATAC
GTTATTGGTTACCTGAATGAACTCATGACGCGGTCGTTACTCTCCGCTGG
CACGAAGAACGGTTATCAAAATTGTGAGCGGTTGATTGGGAGTAGGTTTA
ATAAGATACGTGAGAAGGAAGTACTGAAGGACTACAGGTATTTCGTTATG
GACGTTTTAGTTCATAAATATCGCGGTGAAGAAATTTTCGAAATTGTAGT
TCGCATTCGTAAAATCTCTTTTACAATCGAAATCGTAAAATGGCGTCGTG
TCAGtatttatcaacatttttctaaaTGCTGTGATCACGCAGTTGATATT
CAGTTATGTGTTTGTCGCAAAGAGAGTTTGGGCGCCCAAAACCCTGGTCG
TGATGTCTCAAGACAGTTATCGATTGCTAGTTTCGGTGTGACCACGGAAT
CTGCATTTTTGGATTCTAAATGTTTATTGTTGATGAAACGTgagaaatcg
aatgtttttcgGACGTACGAAATTACAAATATGTGTTACGATCGTATCTA
TCATACAAACTTTACAATCGATGATAAATTGAATATACGATCTACAGTAA
GTGTTCCCATTTCAACGGTCGTTCGTCCATGGTTTATACATTACATCACT
ACAATTTCATTGGATGAAGAGAATGTCAACCCTCAAGAAACGATTgcatt
caaaattgaaaatttgtagcAGTTgtattttttgtatattttgaatataa
aaatttgaacaaaaatgttACAT
Run BLAST on NCBI

protein sequence of TCONS_00025708-protein

>TCONS_00025708-protein ID=TCONS_00025708-protein|Name=TCONS_00025708-protein|organism=Clytia hemisphaerica|type=polypeptide|length=823bp
MLFSRKGIGFLFKTLIFLVITSILFGVWKEPSFQHLFRRQIKVTNQLAGH
VDGGSTELQSAEHPDEGENEVQEDNIQTISKCAFNSLDVNQPRPNISSSQ
TTKCRSIIPTEEECLHAEYQYGVTKKTSPMFSTCRPFNNYQTIADLCRFK
KENDRYRVICDVKPCNGGTIRIGFFQRETGFIKFSTADNYKAKSKLEKAI
WSIYNVHKSKVNFCLLACFSDPNFIKQAVVFPPRLLKRKVGPKPPDHDNK
ININILLLDSVSRQHFYRKLPATAEAIREIKVTKESKIYDFEFFQSIAPR
TFPNVRALFSGKVDIDANDEELDYHLENLTGYFRNLGYQNILQEDSCWFD
VWGSLVTNNKHMENVSQNWKSIREKIDQLPIDSLGVSHLSCEAFQQYGKT
NQFNNPPKVCYNGYLLPSYYLNLTFEYFREIESSPFRSTSKPVFMYTHLN
TAHESTGKRVAQMDYLLAGYVRKMNALENTWTIILSDHGPKTTKYAQQHL
AGRLEIGHAAMFLIVPRKVQDFLGVERLKALEINQKILSSHLDLHHALKT
LYSKSAGGLLRLLPNNRFCGHVPMYSFMNCLCNGGTKIRTQSEPFHWIAE
YVIGYLNELMTRSLLSAGTKNGYQNCERLIGSRFNKIREKEVLKDYRYFV
MDVLVHKYRGEEIFEIVVRIRKISFTIEIVKWRRVSIYQHFSKCCDHAVD
IQLCVCRKESLGAQNPGRDVSRQLSIASFGVTTESAFLDSKCLLLMKREK
SNVFRTYEITNMCYDRIYHTNFTIDDKLNIRSTVSVPISTVVRPWFIHYI
TTISLDEENVNPQETIAFKIENL
Run BLAST on NCBI

transcript from alignment at sc0000543:80264..85170-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025708 ID=TCONS_00025708|Name=TCONS_00025708|organism=Clytia hemisphaerica|type=transcript|length=4907bp|location=Sequence derived from alignment at sc0000543:80264..85170- (Clytia hemisphaerica)
CGGGGGGTAAATTTGCTCTGTCCGGGGGTAATTTGGGGTGTCCGGGGGGT
CAGCAGATGCTTGTCCGGGGGGTAAAACCTATTGTCCGGGGGGGCAAAAG
TCACCCTGTTCGGGGGGTAAATCACTAAAAATTGTTATATCCTCCACCCC
CCATGTACAATTTTTTTCTGAAAGAGCCCAATTTGAGATAAGTTGGTGGC
TATAATATTCATGTTTATTCACTATCGTAGAAATAATTATTGAGATGTTA
GATAAATCATATCGTGAAGTACACGTTTTTTATAGGAACATCCAAAATTT
TTGAAGGATGTTCTTAACTTCTTTAGTTTTAAGCCTAAAAATGTTCTTAA
CATGTTCTTATTTTCACCATTTTTTGAGCATTTTTGTCCATTTTCCTAAG
AAACTGGGTATTCTAGAGTCCCAAAGCCTTAAAATGTTCTTAACTTGTTC
TTAACATTTTTGCCATCGAAGCCTTATGTTCTGATATATTTTGTTTTTCT
AAGAAAACGTGATTCGTACAGTACGATAAGACTGAAACAGAAAAACTTTC
AACAAAGCTTTCCAGCTCATGTTCAGCACTTCTATTTTAAGTTAGTAAAA
TGTTTGATCTTTTTGTTTCTTTTCTTTTTCATTTTGACAACAACAAACGA
AACAAACAAAACAAAATGAAAGAACAGATGTTTCAATATTGTGATGGTGA
ACTTTCAATATGGTTGAAATATGCTGTTGTTGGTGGGTGTATGAAGAATG
CTTTTTAGCCGCAAGGGCATCGTAAGTTTGCTTTTATCGTCTTTTTATTA
TGGTTTTTAGGAATTTGAGTGGAAAAATATCTGGTACTCGAGTAATTCAA
TAAACTCTTCTACGCCATTATTCAAATGCTAATATTTTAACCTAGTCAAA
TGATTTGAAACTTTAAAGGTTTTGTTTTCAAATAAGAGTGATATAGTTTG
CTTACTCCTAGATTTTAATTTACAAGCTTTTTGATATTGAATTGACACGG
ATGTTGAGCAAGATTGGTCAGAAAGAGGAAAAGAAAAACATATTTTGTTC
ATATCAGCACAATATAACAATAGGCAGACATTGTCCTTATATGAAATATG
TGTCTGGTATGAAACGGGAACACTTATGTGAAAATAAACCCTTTAAGGGC
GAAATTTCAGAAGAAATAAGGAGTGAAAAAGCATTACTCTCACCACGTGT
TCTTCAAAATTCGTTAGCTGTCCATATTCTATTCTCAATAAAGATTTCAT
TTTTCCTACAGGGATTTCTTTTCAAGACATTGATATTTTTGGTGATAACA
AGCATTTTGTTTGGTGTATGGAAAGAACCCTCTTTTCAACATCTCTTTCG
AAGACAAATCAAAGTAACCAATCAACTAGCTGGACATGTTGATGGTGGAT
CAACCGAACTGCAATCGGCAGAACATCCAGATGAAGGCGAAAACGGTAAG
GATAACAATAATGGCAGACTTGTAGTGAGTAGCTATTCGTTGTTTTGAAC
TGGAATCAGTTTTCATCAATGAAAGTAGTGGGTCTTACCACCATGCATCC
TTAACACCCTGCTGAAAAGTGTTTTGGATTGGAACACAATCCATTGCGCA
GATATCAAAACTGAACACTACGTACCAATGTTTTGTATGATCTCCCGGAG
GGGGGGGGGGGGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGGGGGGGGGTACTCCAGGTAAGTGACCTACCGGACGTGCGGCCCTTA
AGGGTAGGTTTTTTTGGACTTTGGAAAGTGCACTGTAAGGGTTGATTTGT
GAACAAGTGGGAAAAAGTGCACTGTAAGGGTTTAAAATTTGAGAAAATAC
CAAATCTTGAGGTAAAATTTGAGAAATTAAAAAAAAATCTGCCCTGAAAA
GGGCAAAAAAATTTGGAAAAATTGCACTATAAGGGTCGGTTTTTAGCAAA
GTTTTTCCTGCACTGTAAGGGTCCGATTTTAAAGACCTGATTTTTGGCCG
AACGTACGGTCGTTTTCAAAATCGAGTGCCCCCCCCCCCCCCCGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAAAAAGTCTCTGTAATTCGAATGTTTCTCTA
ATTCGAAGAGAATTATCGATCCCTTGAAGATCGAATTAGAGAGAGTCGAC
TGCATGACGAAAAGAAATTTACTTTAGTACAACAAGTTTTACATTATTAG
GGTGAGCTGTGACTTTTGTCTCTATACTTAGATGCAATGAAAAGTATTCT
GACGTGTCCTTTATTTCCAATTTCCAATTTCTCTTACAGAGGTCCAAGAA
GACAATATACAAACGATCTCAAAATGTGCTTTCAATTCCTTGGATGTGAA
CCAACCTCGTCCAAACATCTCATCATCTCAAACAACCAAATGTCGTTCTA
TAATCCCAACAGAGGAGGAGTGCTTACATGCTGAATATCAGTATGGTGTC
ACTAAAAAGACTTCCCCGATGTTCTCCACCTGTCGGCCTTTCAACAACTA
CCAAACCATTGCTGATTTATGCCGTTTCAAAAAAGAAAATGACCGATATC
GAGTCATTTGTGACGTCAAACCATGCAATGGAGGTACAATCCGAATCGGT
TTCTTTCAACGAGAGACCGGATTCATCAAGTTTTCCACGGCAGATAATTA
TAAAGCAAAAAGTAAGCTGGAAAAAGCGATTTGGAGTATATATAACGTTC
ACAAATCGAAAGTGAATTTTTGTTTGTTAGCTTGCTTCAGTGATCCGAAC
TTCATCAAACAAGCTGTTGTTTTTCCTCCGAGACTATTGAAACGAAAAGT
GGGACCCAAGCCTCCAGACCATGACAACAAAATCAATATAAATATCCTGC
TATTAGACTCTGTCTCTAGACAACATTTTTATCGAAAGCTACCAGCTACT
GCCGAGGCTATACGTGAAATTAAGGTAACCAAAGAGAGCAAAATATACGA
TTTCGAGTTCTTTCAAAGTATAGCACCTAGAACGTTCCCAAATGTACGTG
CTTTATTTAGTGGCAAAGTAGACATCGACGCAAACGACGAGGAACTAGAC
TATCATCTTGAGAACCTTACCGGATATTTTCGTAATCTTGGTTATCAAAA
TATCTTACAAGAAGATAGCTGTTGGTTCGACGTTTGGGGTTCTCTAGTCA
CAAACAACAAACATATGGAAAATGTTTCTCAAAACTGGAAATCGATCCGT
GAAAAAATAGACCAGTTACCGATCGATAGCTTAGGAGTTAGTCATCTCTC
TTGTGAAGCTTTTCAACAATATGGGAAAACAAATCAATTTAACAATCCAC
CAAAAGTATGCTATAACGGTTATCTATTGCCATCCTATTATTTGAACTTG
ACATTTGAATACTTTCGAGAGATTGAATCTAGTCCTTTTCGTTCAACTTC
GAAACCTGTTTTCATGTACACTCATTTGAATACAGCGCACGAGTCGACAG
GAAAACGTGTCGCCCAGATGGATTACCTGCTAGCAGGCTATGTTCGTAAA
ATGAACGCGTTGGAAAACACATGGACGATCATTTTATCCGACCACGGACC
TAAAACGACGAAATATGCTCAACAACATTTAGCAGGACGCCTAGAAATAG
GTCATGCTGCAATGTTTTTGATCGTTCCACGGAAAGTTCAGGATTTTCTT
GGGGTTGAACGTTTAAAAGCTTTGGAAATTAACCAAAAGATTTTATCAAG
TCATCTAGATTTGCATCATGCTTTGAAAACTCTGTATTCGAAATCTGCTG
GCGGATTGCTTAGACTTTTACCAAATAACCGTTTTTGTGGCCATGTCCCT
ATGTACTCTTTTATGAATTGTTTGTGTAACGGTGGCACGAAAATTCGAAC
ACAATCTGAACCTTTCCATTGGATAGCTGAATACGTTATTGGTTACCTGA
ATGAACTCATGACGCGGTCGTTACTCTCCGCTGGCACGAAGAACGGTTAT
CAAAATTGTGAGCGGTTGATTGGGAGTAGGTTTAATAAGATACGTGAGAA
GGAAGTACTGAAGGACTACAGGTATTTCGTTATGGACGTTTTAGTTCATA
AATATCGCGGTGAAGAAATTTTCGAAATTGTAGTTCGCATTCGTAAAATC
TCTTTTACAATCGAAATCGTAAAATGGCGTCGTGTCAGTATTTATCAACA
TTTTTCTAAATGCTGTGATCACGCAGTTGATATTCAGTTATGTGTTTGTC
GCAAAGAGAGTTTGGGCGCCCAAAACCCTGGTCGTGATGTCTCAAGACAG
TTATCGATTGCTAGTTTCGGTGTGACCACGGAATCTGCATTTTTGGATTC
TAAATGTTTATTGTTGATGAAACGTGAGAAATCGAATGTTTTTCGGACGT
ACGAAATTACAAATATGTGTTACGATCGTATCTATCATACAAACTTTACA
ATCGATGATAAATTGAATATACGATCTACAGTAAGTGTTCCCATTTCAAC
GGTCGTTCGTCCATGGTTTATACATTACATCACTACAATTTCATTGGATG
AAGAGAATGTCAACCCTCAAGAAACGATTGCATTCAAAATTGAAAATTTG
TAGCAGTTGTATTTTTTGTATATTTTGAATATAAAAATTTGAACAAAAAT
GTTACAT

Coding sequence (CDS) from alignment at sc0000543:80264..85170-

>TCONS_00025708 ID=TCONS_00025708|Name=TCONS_00025708|organism=Clytia hemisphaerica|type=CDS|length=7416bp|location=Sequence derived from alignment at sc0000543:80264..85170- (Clytia hemisphaerica)
AGGTCCAAGAAGACAATATACAAACGATCTCAAAATGTGCTTTCAATTCC
TTGGATGTGAACCAACCTCGTCCAAACATCTCATCATCTCAAACAACCAA
ATGTCGTTCTATAATCCCAACAGAGGAGGAGTGCTTACATGCTGAATATC
AGTATGGTGTCACTAAAAAGACTTCCCCGATGTTCTCCACCTGTCGGCCT
TTCAACAACTACCAAACCATTGCTGATTTATGCCGTTTCAAAAAAGAAAA
TGACCGATATCGAGTCATTTGTGACGTCAAACCATGCAATGGAGGTACAA
TCCGAATCGGTTTCTTTCAACGAGAGACCGGATTCATCAAGTTTTCCACG
GCAGATAATTATAAAGCAAAAAGTAAGCTGGAAAAAGCGATTTGGAGTAT
ATATAACGTTCACAAATCGAAAGTGAATTTTTGTTTGTTAGCTTGCTTCA
GTGATCCGAACTTCATCAAACAAGCTGTTGTTTTTCCTCCGAGACTATTG
AAACGAAAAGTGGGACCCAAGCCTCCAGACCATGACAACAAAATCAATAT
AAATATCCTGCTATTAGACTCTGTCTCTAGACAACATTTTTATCGAAAGC
TACCAGCTACTGCCGAGGCTATACGTGAAATTAAGGTAACCAAAGAGAGC
AAAATATACGATTTCGAGTTCTTTCAAAGTATAGCACCTAGAACGTTCCC
AAATGTACGTGCTTTATTTAGTGGCAAAGTAGACATCGACGCAAACGACG
AGGAACTAGACTATCATCTTGAGAACCTTACCGGATATTTTCGTAATCTT
GGTTATCAAAATATCTTACAAGAAGATAGCTGTTGGTTCGACGTTTGGGG
TTCTCTAGTCACAAACAACAAACATATGGAAAATGTTTCTCAAAACTGGA
AATCGATCCGTGAAAAAATAGACCAGTTACCGATCGATAGCTTAGGAGTT
AGTCATCTCTCTTGTGAAGCTTTTCAACAATATGGGAAAACAAATCAATT
TAACAATCCACCAAAAGTATGCTATAACGGTTATCTATTGCCATCCTATT
ATTTGAACTTGACATTTGAATACTTTCGAGAGATTGAATCTAGTCCTTTT
CGTTCAACTTCGAAACCTGTTTTCATGTACACTCATTTGAATACAGCGCA
CGAGTCGACAGGAAAACGTGTCGCCCAGATGGATTACCTGCTAGCAGGCT
ATGTTCGTAAAATGAACGCGTTGGAAAACACATGGACGATCATTTTATCC
GACCACGGACCTAAAACGACGAAATATGCTCAACAACATTTAGCAGGACG
CCTAGAAATAGGTCATGCTGCAATGTTTTTGATCGTTCCACGGAAAGTTC
AGGATTTTCTTGGGGTTGAACGTTTAAAAGCTTTGGAAATTAACCAAAAG
ATTTTATCAAGTCATCTAGATTTGCATCATGCTTTGAAAACTCTGTATTC
GAAATCTGCTGGCGGATTGCTTAGACTTTTACCAAATAACCGTTTTTGTG
GCCATGTCCCTATGTACTCTTTTATGAATTGTTTGTGTAACGGTGGCACG
AAAATTCGAACACAATCTGAACCTTTCCATTGGATAGCTGAATACGTTAT
TGGTTACCTGAATGAACTCATGACGCGGTCGTTACTCTCCGCTGGCACGA
AGAACGGTTATCAAAATTGTGAGCGGTTGATTGGGAGTAGGTTTAATAAG
ATACGTGAGAAGGAAGTACTGAAGGACTACAGGTATTTCGTTATGGACGT
TTTAGTTCATAAATATCGCGGTGAAGAAATTTTCGAAATTGTAGTTCGCA
TTCGTAAAATCTCTTTTACAATCGAAATCGTAAAATGGCGTCGTGTCAGT
ATTTATCAACATTTTTCTAAATGCTGTGATCACGCAGTTGATATTCAGTT
ATGTGTTTGTCGCAAAGAGAGTTTGGGCGCCCAAAACCCTGGTCGTGATG
TCTCAAGACAGTTATCGATTGCTAGTTTCGGTGTGACCACGGAATCTGCA
TTTTTGGATTCTAAATGTTTATTGTTGATGAAACGTGAGAAATCGAATGT
TTTTCGGACGTACGAAATTACAAATATGTGTTACGATCGTATCTATCATA
CAAACTTTACAATCGATGATAAATTGAATATACGATCTACAGTAAGTGTT
CCCATTTCAACGGTCGTTCGTCCATGGTTTATACATTACATCACTACAAT
TTCATTGGATGAAGAGAATGTCAACCCTCAAGAAACGATTGCATTCAAAA
TTGAAAATTTGTAGGGATTTCTTTTCAAGACATTGATATTTTTGGTGATA
ACAAGCATTTTGTTTGGTGTATGGAAAGAACCCTCTTTTCAACATCTCTT
TCGAAGACAAATCAAAGTAACCAATCAACTAGCTGGACATGTTGATGGTG
GATCAACCGAACTGCAATCGGCAGAACATCCAGATGAAGGCGAAAACGAT
GCTTTTTAGCCGCAAGGGCATCAGGTCCAAGAAGACAATATACAAACGAT
CTCAAAATGTGCTTTCAATTCCTTGGATGTGAACCAACCTCGTCCAAACA
TCTCATCATCTCAAACAACCAAATGTCGTTCTATAATCCCAACAGAGGAG
GAGTGCTTACATGCTGAATATCAGTATGGTGTCACTAAAAAGACTTCCCC
GATGTTCTCCACCTGTCGGCCTTTCAACAACTACCAAACCATTGCTGATT
TATGCCGTTTCAAAAAAGAAAATGACCGATATCGAGTCATTTGTGACGTC
AAACCATGCAATGGAGGTACAATCCGAATCGGTTTCTTTCAACGAGAGAC
CGGATTCATCAAGTTTTCCACGGCAGATAATTATAAAGCAAAAAGTAAGC
TGGAAAAAGCGATTTGGAGTATATATAACGTTCACAAATCGAAAGTGAAT
TTTTGTTTGTTAGCTTGCTTCAGTGATCCGAACTTCATCAAACAAGCTGT
TGTTTTTCCTCCGAGACTATTGAAACGAAAAGTGGGACCCAAGCCTCCAG
ACCATGACAACAAAATCAATATAAATATCCTGCTATTAGACTCTGTCTCT
AGACAACATTTTTATCGAAAGCTACCAGCTACTGCCGAGGCTATACGTGA
AATTAAGGTAACCAAAGAGAGCAAAATATACGATTTCGAGTTCTTTCAAA
GTATAGCACCTAGAACGTTCCCAAATGTACGTGCTTTATTTAGTGGCAAA
GTAGACATCGACGCAAACGACGAGGAACTAGACTATCATCTTGAGAACCT
TACCGGATATTTTCGTAATCTTGGTTATCAAAATATCTTACAAGAAGATA
GCTGTTGGTTCGACGTTTGGGGTTCTCTAGTCACAAACAACAAACATATG
GAAAATGTTTCTCAAAACTGGAAATCGATCCGTGAAAAAATAGACCAGTT
ACCGATCGATAGCTTAGGAGTTAGTCATCTCTCTTGTGAAGCTTTTCAAC
AATATGGGAAAACAAATCAATTTAACAATCCACCAAAAGTATGCTATAAC
GGTTATCTATTGCCATCCTATTATTTGAACTTGACATTTGAATACTTTCG
AGAGATTGAATCTAGTCCTTTTCGTTCAACTTCGAAACCTGTTTTCATGT
ACACTCATTTGAATACAGCGCACGAGTCGACAGGAAAACGTGTCGCCCAG
ATGGATTACCTGCTAGCAGGCTATGTTCGTAAAATGAACGCGTTGGAAAA
CACATGGACGATCATTTTATCCGACCACGGACCTAAAACGACGAAATATG
CTCAACAACATTTAGCAGGACGCCTAGAAATAGGTCATGCTGCAATGTTT
TTGATCGTTCCACGGAAAGTTCAGGATTTTCTTGGGGTTGAACGTTTAAA
AGCTTTGGAAATTAACCAAAAGATTTTATCAAGTCATCTAGATTTGCATC
ATGCTTTGAAAACTCTGTATTCGAAATCTGCTGGCGGATTGCTTAGACTT
TTACCAAATAACCGTTTTTGTGGCCATGTCCCTATGTACTCTTTTATGAA
TTGTTTGTGTAACGGTGGCACGAAAATTCGAACACAATCTGAACCTTTCC
ATTGGATAGCTGAATACGTTATTGGTTACCTGAATGAACTCATGACGCGG
TCGTTACTCTCCGCTGGCACGAAGAACGGTTATCAAAATTGTGAGCGGTT
GATTGGGAGTAGGTTTAATAAGATACGTGAGAAGGAAGTACTGAAGGACT
ACAGGTATTTCGTTATGGACGTTTTAGTTCATAAATATCGCGGTGAAGAA
ATTTTCGAAATTGTAGTTCGCATTCGTAAAATCTCTTTTACAATCGAAAT
CGTAAAATGGCGTCGTGTCAGTATTTATCAACATTTTTCTAAATGCTGTG
ATCACGCAGTTGATATTCAGTTATGTGTTTGTCGCAAAGAGAGTTTGGGC
GCCCAAAACCCTGGTCGTGATGTCTCAAGACAGTTATCGATTGCTAGTTT
CGGTGTGACCACGGAATCTGCATTTTTGGATTCTAAATGTTTATTGTTGA
TGAAACGTGAGAAATCGAATGTTTTTCGGACGTACGAAATTACAAATATG
TGTTACGATCGTATCTATCATACAAACTTTACAATCGATGATAAATTGAA
TATACGATCTACAGTAAGTGTTCCCATTTCAACGGTCGTTCGTCCATGGT
TTATACATTACATCACTACAATTTCATTGGATGAAGAGAATGTCAACCCT
CAAGAAACGATTGCATTCAAAATTGAAAATTTGTAGGGATTTCTTTTCAA
GACATTGATATTTTTGGTGATAACAAGCATTTTGTTTGGTGTATGGAAAG
AACCCTCTTTTCAACATCTCTTTCGAAGACAAATCAAAGTAACCAATCAA
CTAGCTGGACATGTTGATGGTGGATCAACCGAACTGCAATCGGCAGAACA
TCCAGATGAAGGCGAAAACGATGCTTTTTAGCCGCAAGGGCATCAGGTCC
AAGAAGACAATATACAAACGATCTCAAAATGTGCTTTCAATTCCTTGGAT
GTGAACCAACCTCGTCCAAACATCTCATCATCTCAAACAACCAAATGTCG
TTCTATAATCCCAACAGAGGAGGAGTGCTTACATGCTGAATATCAGTATG
GTGTCACTAAAAAGACTTCCCCGATGTTCTCCACCTGTCGGCCTTTCAAC
AACTACCAAACCATTGCTGATTTATGCCGTTTCAAAAAAGAAAATGACCG
ATATCGAGTCATTTGTGACGTCAAACCATGCAATGGAGGTACAATCCGAA
TCGGTTTCTTTCAACGAGAGACCGGATTCATCAAGTTTTCCACGGCAGAT
AATTATAAAGCAAAAAGTAAGCTGGAAAAAGCGATTTGGAGTATATATAA
CGTTCACAAATCGAAAGTGAATTTTTGTTTGTTAGCTTGCTTCAGTGATC
CGAACTTCATCAAACAAGCTGTTGTTTTTCCTCCGAGACTATTGAAACGA
AAAGTGGGACCCAAGCCTCCAGACCATGACAACAAAATCAATATAAATAT
CCTGCTATTAGACTCTGTCTCTAGACAACATTTTTATCGAAAGCTACCAG
CTACTGCCGAGGCTATACGTGAAATTAAGGTAACCAAAGAGAGCAAAATA
TACGATTTCGAGTTCTTTCAAAGTATAGCACCTAGAACGTTCCCAAATGT
ACGTGCTTTATTTAGTGGCAAAGTAGACATCGACGCAAACGACGAGGAAC
TAGACTATCATCTTGAGAACCTTACCGGATATTTTCGTAATCTTGGTTAT
CAAAATATCTTACAAGAAGATAGCTGTTGGTTCGACGTTTGGGGTTCTCT
AGTCACAAACAACAAACATATGGAAAATGTTTCTCAAAACTGGAAATCGA
TCCGTGAAAAAATAGACCAGTTACCGATCGATAGCTTAGGAGTTAGTCAT
CTCTCTTGTGAAGCTTTTCAACAATATGGGAAAACAAATCAATTTAACAA
TCCACCAAAAGTATGCTATAACGGTTATCTATTGCCATCCTATTATTTGA
ACTTGACATTTGAATACTTTCGAGAGATTGAATCTAGTCCTTTTCGTTCA
ACTTCGAAACCTGTTTTCATGTACACTCATTTGAATACAGCGCACGAGTC
GACAGGAAAACGTGTCGCCCAGATGGATTACCTGCTAGCAGGCTATGTTC
GTAAAATGAACGCGTTGGAAAACACATGGACGATCATTTTATCCGACCAC
GGACCTAAAACGACGAAATATGCTCAACAACATTTAGCAGGACGCCTAGA
AATAGGTCATGCTGCAATGTTTTTGATCGTTCCACGGAAAGTTCAGGATT
TTCTTGGGGTTGAACGTTTAAAAGCTTTGGAAATTAACCAAAAGATTTTA
TCAAGTCATCTAGATTTGCATCATGCTTTGAAAACTCTGTATTCGAAATC
TGCTGGCGGATTGCTTAGACTTTTACCAAATAACCGTTTTTGTGGCCATG
TCCCTATGTACTCTTTTATGAATTGTTTGTGTAACGGTGGCACGAAAATT
CGAACACAATCTGAACCTTTCCATTGGATAGCTGAATACGTTATTGGTTA
CCTGAATGAACTCATGACGCGGTCGTTACTCTCCGCTGGCACGAAGAACG
GTTATCAAAATTGTGAGCGGTTGATTGGGAGTAGGTTTAATAAGATACGT
GAGAAGGAAGTACTGAAGGACTACAGGTATTTCGTTATGGACGTTTTAGT
TCATAAATATCGCGGTGAAGAAATTTTCGAAATTGTAGTTCGCATTCGTA
AAATCTCTTTTACAATCGAAATCGTAAAATGGCGTCGTGTCAGTATTTAT
CAACATTTTTCTAAATGCTGTGATCACGCAGTTGATATTCAGTTATGTGT
TTGTCGCAAAGAGAGTTTGGGCGCCCAAAACCCTGGTCGTGATGTCTCAA
GACAGTTATCGATTGCTAGTTTCGGTGTGACCACGGAATCTGCATTTTTG
GATTCTAAATGTTTATTGTTGATGAAACGTGAGAAATCGAATGTTTTTCG
GACGTACGAAATTACAAATATGTGTTACGATCGTATCTATCATACAAACT
TTACAATCGATGATAAATTGAATATACGATCTACAGTAAGTGTTCCCATT
TCAACGGTCGTTCGTCCATGGTTTATACATTACATCACTACAATTTCATT
GGATGAAGAGAATGTCAACCCTCAAGAAACGATTGCATTCAAAATTGAAA
ATTTGTAGGGATTTCTTTTCAAGACATTGATATTTTTGGTGATAACAAGC
ATTTTGTTTGGTGTATGGAAAGAACCCTCTTTTCAACATCTCTTTCGAAG
ACAAATCAAAGTAACCAATCAACTAGCTGGACATGTTGATGGTGGATCAA
CCGAACTGCAATCGGCAGAACATCCAGATGAAGGCGAAAACGATGCTTTT
TAGCCGCAAGGGCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014436XLOC_014436Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025708-proteinTCONS_00025708-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025708-exon-sc0000543-1575043694:84400..85170TCONS_00025708-exon-sc0000543-1575043694:84400..85170Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1575043694:83726..83909TCONS_00025708-exon-sc0000543-1575043694:83726..83909Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1575043694:80264..82581TCONS_00025708-exon-sc0000543-1575043694:80264..82581Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1510915933:84400..85170TCONS_00025708-exon-sc0000543-1510915933:84400..85170Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1510915933:83726..83909TCONS_00025708-exon-sc0000543-1510915933:83726..83909Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1510915933:80264..82581TCONS_00025708-exon-sc0000543-1510915933:80264..82581Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1491911889:84400..85170TCONS_00025708-exon-sc0000543-1491911889:84400..85170Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1491911889:83726..83909TCONS_00025708-exon-sc0000543-1491911889:83726..83909Clytia hemisphaericaexon
TCONS_00025708-exon-sc0000543-1491911889:80264..82581TCONS_00025708-exon-sc0000543-1491911889:80264..82581Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000543supercontigsc0000543:80264..85170 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.422845	0.553541	0.445333	0.533668	6.50385	6.16741	4.35172	4.94806	1.37707	1.75355	2.52592	2.68682	2.24421	1.6268	1.31553	3.32613	2.34964	1.93875	0.755582	0.76117	1.68052	1.89018	1.48954	1.4727	1.635	3.48216	1.08084	0.461206	0.424016	0.495463
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017849Alkaline_Pase-like_a/b/a
IPR004245DUF229
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025708 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top