TCONS_00025230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025230
Unique NameTCONS_00025230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2832

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025230 ID=TCONS_00025230|Name=TCONS_00025230|organism=Clytia hemisphaerica|type=transcript|length=2832bp
AAATTTCCTAATAAGGACTTAaacttttattttctcattgttTGTAAGAT
GCAAATTCGATGGGCATGACTGCGCAGTTTTTTCCCCCTTTAAAAAGTAT
AAAAGTGCATAAATGCTTGTCTGGTTCATAGCAAAAGCCTTAGTCATCCG
GATAAGAAGCCTTAGGAAGAAGCTGCTACTGCAACAAATCAAAGCAATCT
CAATTTAGAGATTGAAGCACAGAGAAAGACGAAAAATCTACTGTTGTCGA
ACGTCTCCAGCCTCAAGATGAAGGACAGAGCAGCAGCGGCATacattttc
gtattttttatgGTAAACATTGTTTTATCGGATGCAGCAGATGAAATGGA
AAAGAACGAAACAAAAAGCGGTGATTTACCAATCTTGTGTCCTCAATGTG
ATCCAAACTGGACGCCTTTCCCTAACATGGTGTCTGGTCTAGTTGGCTAT
AATATCGTTAGTAGTGACCCATTGGTAACAGCGGCAGATCCTGGAATGGG
AAATCAAATTTTCGCACCAACTAAATATATTGATGGTACAGTGTATCTTG
ATGATTCTATTACAGCTTTTGAACTAAGTAATTGTCAGCGGTCAATGAGT
ATTAAATCGTGGACAAACTTAAACCAAATGAGCTCATCATTAGAAGAAAC
TTCAACAAGTGGATATAATTTGCAGTTGGGTTATGATTCAAAGGTCACTG
CTGGGGTAGAAGGTTTGGATCTTTCATCTGATATTCCAGCTCCTTTCACT
ATGGGATGGagtaattctaaaacaatgaaaaatgcTGCATCCTCATTCTC
TGAAGAACAAGGCATGGTGGCGTTTACACATGGCATGTGTATTcaatatg
aaatgaaattgagtgCTTACTATTTACCTGAATTCATGCCACCATTTGTC
ATGGCTATTGGAGAGTTGCACGATGCGAGCAGTCAAAGTACAAACGAACA
AGAAAATGCGtttaaaaagtttgtcaatgAGTTTGGAACCCATTATATGA
TACATTCAGAACTGGGAGCATTATTTGCACAACAAACAACTTACTCGGGA
ACTGTTCGTCAAAATATGGATCACGAGGCGTTACAACAATGTAATTCAAA
GCAAGCGGTAAAGATATTTGGTGTTCAAACGGCGCCAGATACGTCAAAAT
GCACAGATACAGCTGAAGAAACCCTAAATTCGTATTCACAAAATGACGTT
AAACAAGTCACAATAACTAAAGGATCAAGACCTACTGATATTGCAGACTG
GGCGACACAAGACTTCACACCTACGCCATTAAGATACCAATTTTCACcta
ttgtcaatatatttcaagACAATTTCATCGAAAAACGAAACATACAAAAT
TCAGATGGCCAGCCTGTTGATTCATTAAAACTTCGCCAATGGTTTATGCC
TCTATATGACAAATATTGTGAAGTGCTCGGCTTCAAATGTTCAATGGCTA
AAGGGTGCGGTTTTGACGATAATTGTCCAGTTGATACAGTATGTGAGGGT
GAAGGTGAAACACATGAATGCGGTGAATGGGGAGAATGGGGCTCATGGGC
TTGTAGTGATTGTGGTGTTTCATTGCAAAAGAAAAGAACACGCGAATGTA
CAGGGTGCAAAGGAGACGAAGAACAAATCAAATACTCTGAAGATCCAACA
GATTGCTGTAACGTTCTACACAAAGTGTATGTCCGAGTTTCATTGTACGA
AAATGCTGATGCTGGTAGTAAATATGAACCCTACGGTGATATGAAGATCT
CAATCGGTGATCGGTcggaaaatcaaaataaaccaGCCTGGCATGTCACA
AGAGATCATTGTCCAAGCTATAAGTTAAGCACTTGGTATCGTGGACCAGA
TAAATATATTGAATTTTATGAACACTTTGATTTCCTTAAATCAGATGGTA
ATATCTTCAAGTTACATGGACATGCTTGGGAGGCTGATAGTAATCCTGAT
GATCTGATTGCAAAGTTTGATGGTTTTCAAGATGATGTGAAAAAATATCT
TGATTATGATTGGATCCACTTCAATGGTAAACATGGCAATGGTAATGAAG
AAGGTGAAGTAAAAATCAAATTCTATAAagtttgaatttgacaaaacttT
AAAAGAAGGAAATTAATCATTTGataaagaatttcattttttccaggCTA
TAAATTTAAAGTTTCATATTGGTCACATTTTTATTATTACCTGACCAGAC
ATCGGTTTACTGTTATGTAATATTTTATATTATAACATATATTTGTATGG
CCTTTCATTAgattattgagatttattaactgGAGGTGAGTGATGTTCAA
TAACATTTACCAAGTAgagttaataaatccaatatcTAAGGAAAGTTGAC
ATgcaatatatgttttattatataccaaGAATCATTTCATCTACATTTCC
AACAAAAGCTAATCAATCACAAGCGTTTTAGACTAtattttaattgaaaa
actaaagcacaaataattttccaaaactATCAGAAGCAACTCCATTGCTG
GCGTGGTACTCAAGCGTGCAATAATTACCGTATCATTGCACAGTCATGGG
CAATATGGAGATttattttagatgaaaaaagcTTACTGGTATATAATAAA
AGttcatatttaattttttttgtttatcccatactattaattttgttagt
ttATTCAAAAGCAAGTTAAAATTACAAACATTTCTTCTGAGTTTAaccaa
attattttaaagacattttcGTTATCTTTCTTGtttatcaatttcaattt
tcgatGAAAGAATTTTAATTGTCATTAAATTTGTGAAAACTTCGACTTta
ttattcatagaattatatttctgACTATAAAG
Run BLAST on NCBI

transcript from alignment at sc0000527:191835..206030-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025230 ID=TCONS_00025230|Name=TCONS_00025230|organism=Clytia hemisphaerica|type=transcript|length=14196bp|location=Sequence derived from alignment at sc0000527:191835..206030- (Clytia hemisphaerica)
AAATTTCCTAATAAGGACTTAAACTTTTATTTTCTCATTGTTTGTAAGAT
GCAAATTCGATGGGCATGACTGCGCAGTTTTTTCCCCCTTTAAAAAGTAT
AAAAGTGCATAAATGCTTGTCTGGTTCATAGCAAAAGCCTTAGTCATCCG
GATAAGAAGCCTTAGGAAGAAGCTGCTACTGCAACAAATCAAAGCAATCT
CAATTTAGAGGTAATTTATTCATCTCAAATAACAAAGGGCATATCAAAAA
TGGTTGTAAAAATACAGCATTCATTTCGACTAAATTTAACCTGAGATCAG
ATTGTGGTTGTTTTCTGCCCACCACGCTGAAGCTCTAAAGGGATGGGTGA
AAACATATAATCTGACGAATATGAAATCTTGAAATCGTAAGGACCGCGTT
CGTTTAAAAGGACTGGGGATGACAACAAAGTTGCGTGATTGTGTTTATGA
ATAGGGCGCCGTATCAGTTTTTGACTTTCTGGCGCACAACAAGATTCTTG
TCGTGAAATTTTCCGCGGGAGGACTATAGACCTTATCGGAGTTTTTGATT
TTTCTAAAAAAGCGATGCATTGTGGGATTGTTTCGAGTGTATTACAATAG
AATTCCCTAGAGGTATTCCTAAGAGATTTCTATTGTAATACACTCGAAAC
AATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAAAACTCCGATAA
GGTCTATTTTCCTCAGATGTATAATTTTCAAGTGCCTTGAGGGGTTTACC
GTGCACGTAAGAAAATTATGAACAGCTGTTATCAGGTTAACTAAATTAGG
TTAGATTAAGAAAAAAATATATATGTTGTGAAAGAATGCCTTTTAAACTA
ACAAACCAAAAAGTTGTCGACGACAATAAACTCTCTCTCAATAACTTCAG
CAGAAATTAAAACTAAAGGAAATACTCTGCCAGGGGATTTAATACCCTTT
TCTTAAATTGTCAAACGTGCAAACCGCACTGACTCAACTTCAGTATCTTT
GAAATCATTCGTAGGCCCAATTGTAAACTAAATGGCTTAAGGAAAATTTT
AGCATTTCTTAAATAGGTTTTAGCCTCGTTTATGCTAAAAACTCGTCCCC
AGGCCCCAACAAGAATTTTTTTTAAATGAAACATGTACCCCGAGATATTC
ACCCAAGGAACAAGTGTGCAAAATTTCAGCCAAATCTGACTCGTTTTGGA
GAAAACTCGTGAACACGCCCTTTAAAATGAAAATTTTCAAAAAATGAAAA
AACACCCCAGATATTCACTCAAGGAACAAGTGCGCCAAATTTCAGCCAAA
TCTGACCATTTTTGAAGTCTCAAGCCTGCCCCAAAGTTTTAGCCTCGTTT
TGGAGAAAACTCGTGAACACGCCCTTAAAAATGAAAATTTTCAAAAAATG
AAAAAACTTCCCCCAGATATTCACCCAAGGATCAAGGTGCAAAATTTCAG
CCAAATCGGACCATTTTTGAAGTCTCCAGCCTGCCCCAAAGTTTTTGTGA
CAGACGCACAGACATTATCAGATTCTAGCTCAACCGAAGTTGAGAAAGCA
TCAATGTAGGAAATTGATTACTTAGATTGACTTTTAAATTAAATTAACGG
GAATTCAATAGAATAAACTGATAGATTGGCGTATTTTCGTATTTTGTTTG
TCGTAAAATTAGTAGAGATTCTCTAGGGAAATCATAGCAGTGTTTAAAAA
AGAGTTTCAACTTTCAGATTGAAGCACAGAGAAAGACGAAAAATCTACTG
TTGTCGAACGTCTCCAGGTAGGAATTTTTTACAGATCGAAAATTATTACG
TTGAAGTTTATAGTTTTTAGAGTTTGTTCGTAGATTCTAATGAATATCTT
TCTATATTTTTTTTGAAAAACAGCAGTGCCATTTTGGGGAAAACACATAA
GTTTTGGAAACGGGACAAATTTAAGAAAAATTTCAAAAGTAGTTCAATTA
ACTCTTGAATTTTAAACAAGATCATTTTTTTTTGTTTTTAAATAAGAGTA
TCGTTTGCTTACTCGTCAACTTTATAATTAACAGTCTTTTTGATATTGAA
TTGACACGGATGTAGAGCAAAAGGAAAAGAAATAAAATATTTCTTTTGTT
TATACCAGCATAATAGGCGGACACTGTCCCGATATTAAAGGGACATAACA
GTACTTGCGAAACTTGTAAACAAACTGTATGCAGTGGATACAAAATCAAA
ACAAATGTCACATGTCAAAATAAAAAATCAAACCAAATATGGCTAATTTT
GATTGTTCAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTGT
TCTCTTTAATGACACGTGGTTCGAGTAAAGTTTACATTTTACTACTCTAA
TGTCCCTTTAAATATGTGTCTGACATGAAACACTTATGGGAACACTTATG
TAAAAATAATACTTTAAACCATAAACTTGCTTTCAGCCTCAAGATGAAGG
ACAGAGCAGCAGCGGCATACATTTTCGTATTTTTTATGGTAAACATTGTT
TTATCGGATGCAGCAGATGAAATGGAAAAGAACGAAACAAAAAGCGGTGA
TTTACCAATCTTGTGTCCTCAATGTGATCCAAACTGGACGCCTTTCCCTA
ACATGGTGTCTGGTCTAGTTGGCTATAATATCGTTAGTAGTAAGTAGTTA
GATTCTGATTGCTATCTTTCAACACCCCCGTGTCGCAGACCCGCTGGGGC
ATCAGCCCCACTGGAAAATTTAGTAAAAATTTCGTCCTTTGTGGGAAAAA
TACCCTAGAATTTCAGCCACACTGGGAAATTGACTATGATCTCATCCTCA
TTCGAAATTCATTGTTTAAAAATTGCACTCTGAAACCATCCACACTGGAT
TTTTTAACCTTATAACAATAATTTTTATCCCCACTGTAGGAAAAAGTTTC
ACCAGGATGTGAAACAGGGGTGTCTTTTATACTCTACCGTATACATTCCG
TAGTGCAAAGCATAATTCAAAAATAGATGATGTATCGAGTGAAAAAGAAT
TTAAAAAAATTGAAAAATAAAAATGTTTTTCGCCAGCCAGTTAGTCACAC
TAGCGTCCCGCCGAAATGCGTATCAAAGATTAATGTTTCAAAAGCGCTTG
CCTGACTCTCAAGCAAAAAAAATGCGCCGCAAAATTTCTAGAGTGATTTA
TAAAAAAATAACCCGGTGCTTTTTAATGAAATTAAAATTTTCAAAAAGTA
TGAGAAATTGCTCAAAATTTGAGCCGTAAATGAAAAAAATTGAGCCAAGC
TAACCTTGAAAACTAATTTGAAGATCAACTTCCCAAGAAAAAGATCTATG
GGGGAGACGGAGCCCACCTAGATCTACGCACCGCCGGATAGGCTACTTCC
CGGAAATTTTGCCGGACCTCAAACACTGACCCATTTACATGTGTGGAATT
ATTTTTACTTTAGCGTATAACAAGGCCTTAAAAATCGAAGCGCTGTCTCG
GGAATTTGGTTGGTTGATATTCTGGCTACTGCACGTTCGCAATCGGTCAT
TTTCTCTCATTCTAAGTTAGTTTTCAAGTTTTAATTAATTGTCTTGAGAA
CTTAAAGTTTATTCAGGTAACTCTCATCCTTGTTGTTTCAAATACATCCT
GTAGATGACTGATATTGTTTTTTCTGAAAGCTTGATATCCTAGTGTGACT
AACTGCCAGCTTCCCATTCAAAAGCATAGTCATAACTTTTTTTATTAAAG
CGGAGCCAGATTCAAAAAATATCTCAGATGGGGGGGATACTAGGGTTGGC
GAGTGAGGGATATGTGTGGACGGGACCTCTAAAAACCGACCCTTAGAGAG
ACTGATTTTAGCTGAAAACTGACTCTTAGGTGGCCGTCCACATAGTACGT
ACGCACTAAAATGTCGAAAATCGAGTACCCCCTCCCCCTGTACGCAAGCG
TACGCAAATGGCTATACCCCCTGATAAGTACATACTTTTTCATTCACCCA
AGAAACAAGCAAAAAAGGGATATGAAAAACTTTTCTCTGCGTACGTACCT
TTTCCTTTGATCCCTCCCCTCCCCCTGTATGCAAGCATACGCTTTTGAGA
AGACCCGCCTCTCCCCTTAGTGCGTACGTACTATGTGTACGGCCCCTAGA
GAGACTTTTTTGAGAAATTTTCTTCGATTTTTGAAAAAAGTCTTACCCTT
AGAGACATTTTTACACGTTTTTTCTTCCGAAATCTAGAAATTTTCCTAAA
ATTTGTGAATTTTGCGACCCTTAGAGAGACTTTAAAAGGTGAAAAACCGA
CCCTTACCCTCTGCACATACGCAGCACTTATTTTTGCTTTTAAGTGCCCC
CCCCCCAGAAAAATGTTGACCCAATCTGACTCAAAATGAGCAAAATTTGA
AAAATTGATTTTTTTTTGGAAATTCTTGTTGCTAAGTCCAAAGATGAAGT
TTATTGGACAAATAATGAGCATATTAACGATACTGATGATAACATTAAGA
AAAATGTCGAGATATCTTGATCAAGCTTCAGTTATTATTAAATTCTTGTT
TTTCCTTAGGTGACCCATTGGTAACAGCGGCAGATCCTGGAATGGGAAAT
CAAATTTTCGCACCAACTAAATATATTGATGGTACAGTGTATCTTGATGA
TTCTATTACAGCTTTTGAACTAAGTAATTGTCAGCGGTCAATGAGTATTA
AATCGTGGACAAACTTAAACCAAATGAGGTATGCTAAAATGTTTACATCA
ATAATCTATAAAACCTTTTTACGATAGTACGTACATAATTATTCAAGGAA
GCCTGAATTCATTTTCTAGGATTTAATCCAGACGAAAAATTTGAAGACCC
TTGTTTTGCGAAAAATAATCCACGCTAAATTTTTGGGAATTTTACGAAAT
CGCAAAAATATAAAAGTTCGCAAAAATCAAAACATAAGACGAGTTTGTCT
GCCTTTGTTCGATTAAATACACACCTCTTTTCTAAAAAATATTCGATTTT
TACAATCTTTTATAGTGGTACTCTCGGGTACCTAATAGTCATCCCCCCCC
CGCTGATTAATTTTTGCTAAAATTCTCCACTCGGGACATTCTTATTCCAT
CCCATCCCCCGCTTATTAATTTTTGGGAATATTTANCCAAACCAACCTTA
AAAACTAATTCGAAGATCAACTTCCCAAGAAAAAGATCTATGGGGGAGAC
GGAACCCACCTAGATCCGCGCACCGCCAGATAGGCTACTTTCCGGAAATT
TTGCCGGAACTCAAATACTGACCCATTTACATGTGTGGAATTATTTCTAC
TTTAGCGTATAAGCAAGGCCTTAAAAATCGAAGCGCTGTCTCGGGAATTG
AATGACGAAATTTTCTTCGATTTTTGAAAAAAAGTCTTACCCTTAGAAAC
ATTTTTACACGTGTTTTCTTTCGAAATCTAAAAGTTTTCCTAAAAACCTT
GAATTTTGCGACCCTTAGAGAGACTTTAAAAGGTGAAAAACCAACCCTTA
CCCTCCGCACATACGCAGCACCTATTTTTGCTTTTAATTGCTCCCCCTCC
AGAAAAATATTTATAGAGTTGACCCAATCTGACTCAAAATGAGCAAAATT
TGAAAAAAATTGATTTTTTTTGGAAATTCTTATTGCTAAAGTCCAAAGAA
GTTTATTGGAGAAATAATGAGCATATTAACGATACTGATGATGACATTAA
TAAATAATGTCGAGATCATGATCAAGCTTCAGTTATTATGAAATTCTTGT
TTTTCCTTAGGTGACCCATTGCAAACAGCGGCAGATCCTGGAATGGGAAA
TCAAATTTTCGCACCAACCAAATATATTGATGGTACAGTGTATCTTGATG
ATTCTATTACAGCTTTTGAACTAAGTAATTGTCAGCGGTCAATGAGTATT
CAATCGTGGACAAACGTAAACCAAATGAGGTATGCTAAAATGTTTACATC
AATAATCTATAAAACATTTTTACTACGATAGCACGTACATAATTATTCAA
GGAAGCCTGAATTCATTTTCTTGGATTAATTTTTGCGTGGATAAATTTTC
GATTTTCACGAATTTTAGCCATTTTCACGTAATTTAATCTACGCGAAAAA
TTTGAAGACCCTTGATTTGCGAAAATTAATCTACGCTAAATTTTTTGGAA
TTTTACAAAATCGCAAAAATATAAAAGTTCGCAAAAACCAAAGTTCACAA
TCAAAACATAAAACGAGTTTGTCTGCCTTTGTTCGATTAAATACACACCT
CTTTTCTAAAAAACATTTTACAATCTTTAAAGTGGTACTCTCGGGTACCT
AATAGTCATCCCCCCGCTAATTAATTTTTGCTAAATTTCTCCACTCGGGA
CATTCTTATTCCACCCCATCCCCCGCTTATTAATTTTCGGGAATATGTTT
TGAAAGTTCCCTATGTTGTCCAAATTCTGCTGTATTAGCCTCCTTTTCAA
AAATTTTCCACCCAGGACATTTTTATTCCAACTCCCTCCCCCACCCCGGT
TATTAAGTTTTGAGATTTTTTTCAACCCCCACCCTCCCACTTATTCCAAC
TCCCCCGGCTATTAGATACCCGAGAGTAATAAATCTTGTTTTCTAGCTCA
TCATTAGAAGAAACTTCAACAAGTGGATATAATTTGCAGTTGGGTTATGA
TTCAAAGGTCACTGCTGGGGTAGAAGGTTTGGATCTTTCATCTGATATTC
CAGCTCCTTTCACTATGGGATGGAGTAATTCTAAAACAATGAAAAATGCT
GCATCCTCATTCTCTGAAGAACAAGGCATGGTGGCGTTTACACATGGCAT
GTGTATTCAATATGAAATGAAATTGAGTGCTTACTATTTACCTGAATTCA
TGCCACCATTTGTCATGGCTATTGGAGAGTTGCACGATGCGAGCAGTCAA
AGTACAAACGAACAAGAAAATGCGTTTAAAAAGTTTGTCAATGAGTTTGG
TACTCATTATATGATACATTCACAACTTGGAGCATTATTTGCACAACAAA
CAACTTACTCGGGAACTGTTCGTCAAAATATGGATCACGAGGCGTTACAA
CAATGTAATTCAAAGCAAGCGGTAAAGATATTTGGTATTCAAACGGCGCC
AGATACGTCAAAATGCACAGATACAGCTGAAGAAACCCTAAATTCNGTCT
GTGAGAAGGGGGTGCATGCAATTCCACCATAATTTATCATTAGCCAAATC
AAACCAATTATCGTCATTTAACACATTAGCCTTTTTCAAATATTTAGACA
AACCCTTTTCTACGTAAATTTTGCGGCACCTTTAGGACGTTTAGATAAAA
CCCAACGAAAAAGCAGTTTGCGTGGTCAACGATCAAAGTTCATTCTTGCA
ATTAGCGTCGAGTAATATAGTAATATACCGGGTGGGTCAAAAAAAAGTAT
TAATTGCTAAAATAAAAAAACAAAATAAACAATCTTCCATTATAAGGAAT
TTGGTTGATCTATAAGTGTAAAAAATCCTAATTTAAGTCTTGGGTATGAA
GTTACAAATCGAAAGAAGAATGACTTAATTAAGAAAATTAACCATATCCC
TAGTAAAAACGCTCACGGAATGGATAATTCGCCAGAAAAATGAAAACACC
TACGCCTCCTTCGCTTGATATAATAAGAATTTGTCTTTCCGATAAAAACT
TCATTTTCTATCAACCAAAAACTGTATGAACAACGTTTATCGATCGAACA
TTGTANAAGACCCTTGATTTGCGAAAATTAATCTACGCTAAATTTTTTGG
AATTTTACAAAATCGCAAAAATATAAAAGTTCGCAAAAACCAAAGTTCAC
AATCAAAACATAAAACGAGTTTGTCTGCCTTTGTTCGATTAAATACACAC
CTCTTTTCTAAAAAACATTTTACAATCTTTAAAGTGGTACTCTCGGGTAC
CTAATAGTCATCCCCCCGCTAATTAATTTTTGCTAAATTTCTCCACTCGG
GACATTCTTATTCCACCCCATCCCCCGCTTATTAATTTTCGGGAATATGT
TTTGAAAGTTCCCTATGTTGTCCAAATTCTGCTGTATTAGCCTCCTTTTC
AAAAATTTTCCACCCAGGACATTTTTATTCCAACTCCCTCCCCCACCCCG
GTTATTAAGTTTTGAGATTTTTTTCAACCCCCACCCTCCCACTTATTCCA
ACTCCCCCGGCTATTAGATACCCGAGAGTAATAAATCTTGTTTTCTAGCT
CATCATTAGAAGAAACTTCAACAAGTGGATATAATTTGCAGTTGGGTTAT
GATTCAAAGGTCACTGCTGGGGTAGAAGGTTTGGATCTTTCATCTGATAT
TCCAGCTCCTTTCACTATGGGATGGAGTAATTCTAAAACAATGAAAAATG
CTGCATCCTCATTCTCTGAAGAACAAGGCATGGTGGCGTTTACACATGGC
ATGTGTATTCAATATGAAATGAAATTGAGTGCTTACTATTTACCTGAATT
CATGCCACCATTTGTCATGGCTATTGGAGAGTTGCACGATGCGAGCAGTC
AAAGTACAAACGAACAAGAAAATGCGTTTAAAAAGTTTGTCAATGAGTTT
GGAACCCATTATATGATACATTCAGAACTGGGAGCATTATTTGCACAACA
AACAACTTACTCGGGAACTGTTCGTCAAAATATGGATCACGAGGCGTTAC
AACAATGTAATTCAAAGCAAGCGGTAAAGATATTTGGTGTTCAAACGGCG
CCAGATACGTCAAAATGCACAGATACAGCTGAAGAAACCCTAAATTCGTA
TTCACAAAATGACGTTAAACAAGTCACAATAACTAAAGGTGAGAAAATTT
AAGCATTACTCTAGAATTAGCATACCAGCTGACACATTTTTTGAGAGCTT
TTCAAAAATATACAACAGATCTCTATTTTCTCGAGCTAAAATTTTCATTA
ATTTTTGACCTTATAATTTTTGCCTAAGACCGTCTAGACTTATATTTGTC
CGAAAATCACACCAAAGTGTCCAAAAAAAATTGGCACCCAAATTATTTTG
ATTCCCCTAGCTCTTAGCTTTCCAAAAATGTATAACAAGTGCATTGACAC
AATCAACTAAAAAAATCGAGTGACCTCAAAAAAAACGAACAAATTTCCCC
CTACTATCAGAGGGGATTGATATTCACATATTTCTTTATGGCTGGGATTT
GAATTTTTTTTATTCAAGTCGNATCCCTAGTAAAAACGCTAACGGAATGG
ATAATTCGCCAGAAAAATGAAAACACCTACGCCTCCTTCGCTTGATATAA
TAAGAATTTGTCTTTCCGATAAAAACTTCATTTTCTATCAACCAAAAACT
GTATGAACAACGTTTATCGATCGAACATTGTACTAAAACTTTTATAAACC
CTGTTGGCTAAAGCTGTCACAGGAAAAGAGTAAAAGTAAGTAAGTTTGCA
TCCGCAGTCGAGGGCGACCCGAAGGCTCCCTTTTCGTATAGCTGCCTACC
CGAAGGTAGGGGAGGGTGCCCCTCCTTTCCCTGGATTTCTCCACTTACCC
TTGATCCGTCTCTTTAGTTGCTGGGAATCAAGCAGAGAGGCATCGAGTAC
CATTTTGGGAATCTTTGGTATGACCCGGCTGGGGATCTAACCCACAACCT
TGCGCACCGTAGCTGGATGCTCTACCTTCATGCTACGGTCGGAAAAGAAC
CTAGATGTTTATTCATGAATTAACTTCTAACTTTCATTTAGGATCAAGAC
CTACTGATATTGCAGACTGGGCGACACAAGACTTCACACCTACGCCATTA
AGATACCAATTTTCACCTATTGTCAATATATTTCAAGACAATTTCATCGA
AAAACGAAACATACAAAATTCAGATGGCCAGCCTGTTGATTCATTAAAAC
TTCGCCAATGGTTTATGCCTCTATATGACAAATATTGTGAAGTGCTCGGC
TTCAAATGTTCAATGGCTAAAGGGTGCGGTTTTGACGATAATTGTCCAGT
TGATACAGTATGTGAGGGTGAAGGTGAAACACATGAATGCGGTGGTAAGC
ATTTTTTCTCAGCTGTTTTGTTTTTAAGGGTTACTTAGACTACACAATAT
ATTGGTGAGCAATATTCGTCAATAAAAGTTATGGACCTCAATGTACGGAG
TAAACAACAGGTACTCTATTATAAAAAGGATTTTTATTTCTGTAAACAAT
TCCCCTATATTATATTGTTGGAATATTGCAAATTAAGCTGACAATATATT
GCGGATACCCTTCAATATATTGCCGGCGGTCAGCAATATATCATCAAAAT
ATTGTCTGACGATATATTGTGTAGTGTATAATGTAGCCCTTTATAGAAAC
AGAAAAAGTGCAATCTTTTATATGTAGTCCCTTTGAAAAGCCCTGTGTCA
CAGACCCACTGGGACTCCATCCACACTGGAAAATTTGGCAAAAATTTGGT
CTCCGGTGGGAAAATACCCTGGAATTTCAGCTCCACTGGGAAATTGACGA
TTTTTATCCCCACTGAAGAAAAAAGTTCCATCGGGGCTGTGAGACAGGTG
TGTTTTTGCCAAACGTCATCAAAGTTATCCAGTATGTAATTATAAGTCGG
AAAAAAATGAAGAATTCAATCCAATCTGACGTAAAAAATAAAGTTTAGGG
TGATTCTTGTATGTTTTTTTTTTTGTCTTCAGAATGGGGAGAATGGGGCT
CATGGGCTTGTAGTGATTGTGGTGTTTCATTGCAAAAGAAAAGAACACGC
GAATGTACAGGGTGCAAAGGAGACGAAGAACAAATCAAATACTCTGAAGA
TCCAACAGATTGCTGTAGTAAGCATAATTCAGCTTTTAAAGTTTTTAAAA
TGGCTCTACGTCTAAATGTGGTTTAAAAAGAGTATTTTCCGAGGGAGTCT
TCAGGAGTCCGACAGCTTTCTAGTCCGACAGAAAATTCCGACAATGCAAC
CGAAGGTTGTGCCAGTTTTTCAAAATAAATTGCCGCCATTTTTTCCTGAC
TACTATTTTAATGAAAAAGACACAGCACATTTTTGGCAACATCTAATTGT
AGAACGTTTTTGTAAGACTCAAATAAGCTCATAAATGCTATGCTGATTGT
CATGAATATTTTACATCACTTTCCTAGTTTAAAAATGTCAAAAGGTTTCT
GACCCCCCTGAAAAGTATTTTTGAAAATTATTTCAATTCATTCTGTAAAC
TCAAGAAATATTAGGAATAAATCAGCTGCACTGGAAAGTCAGCCCAAAAG
GGGCCCAAAAGGCTTAGAATGATTAACCCTATTAGCCCCAGGGGGTAGAA
TCTACCACGCTGGAGTTCTTTTGTTTATATCTCGGAGAAAAATTTTTCAA
ACGACTTGAAACTTTCTGACTTTTAATTCTGACTTTTAATAAAATCTTAT
TAAGAGTACTTGTACAAAATTTTAGGGTCATAGGTTGTCCAGATCAGGTT
TTATGACTTTATTGTGAAACTTGACATAAAACCCAGCTAAAATCATTAAA
ACTCAAAATTTTAAAGTGCTGATAACTTCTAAACTATTTATTCAATCATT
TTCAAATTTTGACACGTGATAGGCATTGATAATACAAATTTAAAAAATCT
AAAGAAAGTTTTTGAAAATGATGACGTCATTATGACGTCATCAAATTTTG
AAAATGTTACTCATCTTCAGCATAGATTTTAAGAAAAAATCTTCATTGAA
ATTGCAAAACCGGCAATTATGTTAAAGAACAGTCTTTTACCTTTCAGAAT
CTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATCGAAATATCTTT
ATTGGTTCGACTGTAATAGACATTTTTGTAAACCATATATTTGGGCTTTT
TTCCGACAGGTGGAAATTTTGTGATGACGTCATCAGTCATCAGTTTTTGA
ATGACGTTATCAATTTTTTTATTCTTCCTGGAAAATTGTATCATGGTGGA
GAACATCTGTACCAAATTTCATGGCCATAGCTCTTCTAGATCGAAAATAA
TCGAGGGTGGTAGATTCTAAAAAAGCTTGGGGCTAATAGGGTTACGAAGT
ACAAATAAAAATCTGAGTGCATCTTTTTTGCTTGGAACATTCAGACGAAA
ACTGAGCACAGTGGAATCCTGTCTTCAAGGAAATTTTATTCCCGAAAGAT
ATAGTCCAAAGTTTATCACTGAACTTGAAATAAAATCGAAAAAAAACAAA
AAAAGAGCCTGTTTTCAAGTCAACCAGGGCAAGGTTTTAAGCTGCATTAT
TCGACTGAATGAATATTTTTTTGAAACTTTTTTCTCGCATTTATGACGTT
CTAAGATTAAAAGATTTATGATATGAAAATGAAGATTATAGCATTATTCT
ACAAGAAGTTAATTTTTTTCTTCTTCATTTTTCATCTTTGTTTTACCATA
TTCTTTGAATATCTTTTTTGATAATATCCCACTCCGAAACATCTTTTTGA
CAATTTCAATTTATGGAAGTGTATTTCTCAGGTCTATTGACCTCTATGAA
ACAATCTTTTATCTTTACAATTTAGATAGATGATAGAGTTTTTACAGATA
GGCCCACACTGGCGTGGGCCTCTAACCCCTAACTCTTCTCTATAATCATG
TTGTTTTCGTCGTAAATTTCTTTAAATAGAGTTTAGTCTACCTCTCACTT
TCCATATATGACTCTTGTCTTTTTCTTTTTATGTTTTTTTCTTTTGCTTT
CTGATGCCATTGTTTTATTATATCGCGTTCTTTCCTTGAAAAATCGTCTG
ATACTCTGAAATCATCTTTATCTAACGTAGCGTATTTTGGTTTGTTACAT
TGGGCTTTTCCAGAAATAGTCCTCAACCAAAATATACTCAACCCCTTCGT
CGGGGGGGTTGAGTATATTTTAAAAAGTGAATATCCAGGGGTCCTTTACT
AATAAAGTGGGATATCCAGGGGGTTCGATACTTCGAAAAATCGATATCCT
CAACAGTGGGGGTAGATTTTTTTTCTGGAAAAGCCCATTTACAAAGCGCA
TATAAATGTTATTTTCCTTTACAGACGTTCTACACAAAGTGTATGTCCGA
GTTTCATTGTACGAAAATGCTGATGCTGGTAGTAAATATGAACCCTACGG
TGATATGAAGATCTCAATCGGTGATCGGTCGGAAAATCAAAATAAACCAG
CCTGGCATGTCACAAGAGATCATTGTCCAAGCTATAAGTTAAGCACTTGG
TATCGTGGACCAGATAAATATATTGAATTTTATGAACACTTTGATTTCCT
TAAATCAGATGGTAATATCTTCAAGTTACATGGACATGCTTGGGAGGCTG
ATAGTAATCCTGATGATCTGATTGCAAAGTTTGATGGTTTTCAAGATGAT
GTGAAAAAATATCTTGATTATGATTGGATCCACTTCAATGGTAAACATGG
CAATGGTAATGAAGAAGGTGAAGTAAAAATCAAATTCTATAAAGTTTGAA
TTTGACAAAACTTTAAAAGAAGGAAATTAATCATTTGATAAAGAATTTCA
TTTTTTCCAGGCTATAAATTTAAAGTTTCATATTGGTCACATTTTTATTA
TTACCTGACCAGACATCGGTTTACTGTTATGTAATATTTTATATTATAAC
ATATATTTGTATGGCCTTTCATTAGATTATTGAGATTTATTAACTGGAGG
TGAGTGATGTTCAATAACATTTACCAAGTAGAGTTAATAAATCCAATATC
TAAGGAAAGTTGACATGCAATATATGTTTTATTATATACCAAGAATCATT
TCATCTACATTTCCAACAAAAGCTAATCAATCACAAGCGTTTTAGACTAT
ATTTTAATTGAAAAACTAAAGCACAAATAATTTTCCAAAACTATCAGAAG
CAACTCCATTGCTGGCGTGGTACTCAAGCGTGCAATAATTACCGTATCAT
TGCACAGTCATGGGCAATATGGAGATTTATTTTAGATGAAAAAAGCTTAC
TGGTATATAATAAAAGTTCATATTTAATTTTTTTTGTTTATCCCATACTA
TTAATTTTGTTAGTTTATTCAAAAGCAAGTTAAAATTACAAACATTTCTT
CTGAGTTTAACCAAATTATTTTAAAGACATTTTCGTTATCTTTCTTGTTT
ATCAATTTCAATTTTCGATGAAAGAATTTTAATTGTCATTAAATTTGTGA
AAACTTCGACTTTATTATTCATAGAATTATATTTCTGACTATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014169XLOC_014169Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025230-exon-sc0000527-1575043694:205821..206030TCONS_00025230-exon-sc0000527-1575043694:205821..206030Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:204264..204313TCONS_00025230-exon-sc0000527-1575043694:204264..204313Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:203392..203594TCONS_00025230-exon-sc0000527-1575043694:203392..203594Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:201353..201521TCONS_00025230-exon-sc0000527-1575043694:201353..201521Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:197293..197882TCONS_00025230-exon-sc0000527-1575043694:197293..197882Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:196087..196389TCONS_00025230-exon-sc0000527-1575043694:196087..196389Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:195314..195448TCONS_00025230-exon-sc0000527-1575043694:195314..195448Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1575043694:191835..193006TCONS_00025230-exon-sc0000527-1575043694:191835..193006Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:205821..206030TCONS_00025230-exon-sc0000527-1510915933:205821..206030Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:204264..204313TCONS_00025230-exon-sc0000527-1510915933:204264..204313Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:203392..203594TCONS_00025230-exon-sc0000527-1510915933:203392..203594Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:201353..201521TCONS_00025230-exon-sc0000527-1510915933:201353..201521Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:197293..197882TCONS_00025230-exon-sc0000527-1510915933:197293..197882Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:196087..196389TCONS_00025230-exon-sc0000527-1510915933:196087..196389Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:195314..195448TCONS_00025230-exon-sc0000527-1510915933:195314..195448Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1510915933:191835..193006TCONS_00025230-exon-sc0000527-1510915933:191835..193006Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:205821..206030TCONS_00025230-exon-sc0000527-1491911889:205821..206030Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:204264..204313TCONS_00025230-exon-sc0000527-1491911889:204264..204313Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:203392..203594TCONS_00025230-exon-sc0000527-1491911889:203392..203594Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:201353..201521TCONS_00025230-exon-sc0000527-1491911889:201353..201521Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:197293..197882TCONS_00025230-exon-sc0000527-1491911889:197293..197882Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:196087..196389TCONS_00025230-exon-sc0000527-1491911889:196087..196389Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:195314..195448TCONS_00025230-exon-sc0000527-1491911889:195314..195448Clytia hemisphaericaexon
TCONS_00025230-exon-sc0000527-1491911889:191835..193006TCONS_00025230-exon-sc0000527-1491911889:191835..193006Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000527supercontigsc0000527:191835..206030 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.44596e-06	0.402434	2.04196e-07	3.12169e-09	8.14415e-07	0	0	0	0	0	0	0	0.267376	0	0	0	2.50049	5.11182	0	7.70054e-09	3.28532	3.67438	8.02576	17.094	2.90678	3.86313	0	0	0	5.7659e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top