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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024686 ID=TCONS_00024686|Name=TCONS_00024686|organism=Clytia hemisphaerica|type=transcript|length=1541bp TCTTCTTACTATCTTTAGATTAAAGAAAGTTTAAAGGAAATAACtattat ttgaagaaaaaaaataagacattacAGAGATTATTATACTTCTAAAGATG GGAAAGAATTGAAAAGTGAACACGATGACACGATGGGCACGCTTCAAGAA CAAACAAGAACATGATGCTTCTTCATGGCAAGATTTGAAGAAAGCTAAAC AACATAATCGAGGGAAGAATAACAAGGGCGGAAAGGAGGAAGAAATACCG GAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGCAGAAAACGTGG GAAGCCATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCAAGATGTC CGAAAAAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAAGTGTGGT TCAACGGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTGATGACAT GCCGTTTGCAACCTGTTTCATTTGTAAACAGAAAGGACACCTTTCAAGTA AATGTCCAGACAACCCAAGAGGTTTATATCCTGACGGTGGTGGTTGTCGA TTTTGTGGTTCTGTTGAACATTATCGTCGAGATTGCCCAGAAAGGAACCC CAACAAGAATAACGGTGAACGCAAACAAACGTTCAAGATGAGAACACAGG CTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAGACGATGAAAGT GATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTCGTCAAATTTTG ATTGGGGAGATTTTAGTGTAATTCAGAAACGTCCATCCAACTTTACAGAA TGTCTTGAGAAACATCATCTAATCATGTATTGTCAAAATAACGCGGAGTG TAAAAGAAAAGTATCTTGATCGAATTACCGAGAGATAGACCTTGTTCGCT TTGTTGACCACGTGGTATCAGGCATCATTTACCTGGAAAAAGTGTGTAAT ATTAAAATGAATCAGAGTCAACTCCGATGGCTGACTTTGCTTTATTCTGG TACAACGATAAACAATGGTTGTTGATTCACGTATTATAATTTTTCTGGAC AATTTGAGAACTCATTGTCTACACCAGACATGGCGTATGGTCATGGTCAA AAGACTTTTCGACGATTGACGACCTCCTGGAGACCAATTAAAGTTTTGGT TAAGGTCCAAGTCACTTTCCATAGAAAGCTACATTACTTTCATTTTGTTG TCTTTTCATGTGTTTCATATACTcttgaaaagtaaattttaattctaaag cttataacttgacaactTCTGGGCCAAATTTAGTATAGGTATAAAAAGGT ATAgtttaaaatttaagattttctcCCTTCTAGCAAAGGTAGCGTAGTTC TTAACTAACGCTTAACACGCTTTTTGAGTCACAGTAGTATATTATTTTTT ATGGCTTCTTAACTAAATGATTTTTATAATTACTATTATTTTTTGGGGAT GCTTGAATTTAAACCTACTATATGTGGGTCTTAAAGATCAAACCATTATT CATAACTCGATCatgtctctttaattcgaacaaagTAGTTG Run BLAST on NCBI protein sequence of TCONS_00024686-protein >TCONS_00024686-protein ID=TCONS_00024686-protein|Name=TCONS_00024686-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
MTRWARFKNKQEHDASSWQDLKKAKQHNRGKNNKGGKEEEIPEWLEKRRA ARRERRKRGKPCFHCREPGHMAARCPKKGEGESAQDICFKCGSTEHSIYQ CKKDTGDDMPFATCFICKQKGHLSSKCPDNPRGLYPDGGGCRFCGSVEHY RRDCPERNPNKNNGERKQTFKMRTQAKEESIEAIDNSSDDESDHNEAPKP KKAKVVKF Run BLAST on NCBI transcript from alignment at sc0000507:32981..37275+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024686 ID=TCONS_00024686|Name=TCONS_00024686|organism=Clytia hemisphaerica|type=transcript|length=4295bp|location=Sequence derived from alignment at sc0000507:32981..37275+ (Clytia hemisphaerica) TCTTCTTACTATCTTTAGATTAAAGAAAGTTTAAAGGAAATAACtattat
ttgaagaaaaaaaataagacattacAGAGATTATTATACTTCTAAAGATG
GGAAAGAATTGAAAAGTGAACACGATGACACGATGGGCACGCTTCAAGAA
CAAACAAGAACATGATGCTTCTTCATGGCAAGATTTGAAGAAAGCTAAAC
AACATAATCGAGGGAAGAATAACAAGGTATCATTTTTATCCATGGACAAC
CAGTTCATCCCACCATATAGGCTATTCTTCAATAATAAACTCGAGGAAgt
cattgttttctttaattCGAGGAAACTGTTAAGGAAGTCATTTTGAAAGA
TTCAATTCCCCCTTCTGGGTTTTTACGGGAATGTAAGAGACAGTCTTGGA
CTTTCCTCTAAATTTCAAAGACTTTAAGGATAAAAATGTGGCATATTTTA
GTCCAACCCAAACAATCATTCAAAGTACACTctatgcaaagaaaaaaaat
cactatTACAGTTATTGGTAAATTCACGGTGAAAGGTTAAGTTTTTAACA
ACGCCGGAGTTTTTATTTGCACTTCTTCCTGCCTGTTTTAGCTTGAGTTT
CCAGCGTCAGTTTATGCTCTATTATTTTGTAGGGCGGAAAGGAGGAAGAA
ATACCGGAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGCAGAAA
ACGTGGGAAGGTTTGATTTTACTTTACTCTTTGCTAACAAAATGAAGGTC
ATGAAAGAGTATTGTCAATGATACTGAACCTAACTTTCAACTTTTCTAAG
TTAAAAGTTAGTCAAATGTGACACAAGATATTGAAGTCAATTCGTTTTAA
GTGTGTTTGCTATTAAGTGTAAACCACGTCAGTTTAATTTGACTAATTGC
CTCTGGAGTGGTTTTCACAGGCGAGGGTAGCAAAAAAGAGAGCATAATAG
CACAACGCACCGaatctagtctacacaatagacagttccgggcttttagg
ccttactctttgtctataggcactgctataggcgggcggccactagtaac
ccccaccgagaattgcttattaatatgtttaaacataatagacaactttc
acaaaagatgtttatcaatagagatttcaaataaaagaatgctTAAAACA
Caactgattggcttaggtttccaaactctctattgttttattacaacctc
agtgcgcatgcgatttatctggagaatttcaatattccaaacaagagcag
tgctcatatcccgaagagtaggagttttacgctcgaaacggagggagata
tgacgtagcctaaccGAATCTAGAAATAGTAACAAATCTGCACAAATATA
CTTCGCTTGTACGACCTGCGATCCCATCCTCCTTTGCGTTAAATTGCTTT
TGTACGTTAATTAATTACAATATCAAAGGAAATGTAATAACTTTCACGGT
TTCCCAATCGTACAAATTTctagttgaaataattatgacgtGTAAGATGC
GGAACATAATTGATTTGAATAGACTGAAGGTCCTTTTGAAGTTCCGAGGA
TttactttattttgtttttgaaccttttcaaatttctttctttcttcagC
CATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCAAGATGTCCGAAA
AAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAAGTGTGGTTCAAC
GGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTGGTATGTCGTATC
ttcatgatttcaaaaatttagatctGTTAAGTTTACCAATTTCACTCTGA
TTATTTACTGAGCATTTGTATTTGTAATTTGTCTTAAGTTAAGTTTAGTG
TTAAATCCAGTTAGCAGAGCAGTATTCGAATTTCTTTCAGAGTGGTGATC
TTTCTCCACTGTAAACGGTTATTAGTCTGAATGCTGAATGGAATCATAAA
AGACGGGTTAATCGTGAAAAAAGACTCTGCCCCTTGCCTATTTGAAACTG
CTAGGTATAATTGAAGTTTTATTATATCTAGACTACATTACTAGGAGCCC
CACGACAAGGCCTTTGTTTCAACTAAGATAAAAGTTCAAATAAACTCAGT
TTGTtctaggcgtacaaactttcgcgagcagaaactttcgcgattttcgc
gaattttggccttttcgTGAatgtaaatgtctttgaaaattcttaacggG
GTAATACGCGAAAGTTTATGTTCtcgaaaattctcaaaaaaatggaaatc
taataaaacctcgaaatcgtaatgaatatcaaattttcggcatattttta
tcctttaatgcctttttaaagtcgaagagcTACCGTCTTTATCAGATTTA
AAGAATATTTCTCACTTTTAAGGCAGAAAATTCccatttttatccaacga
ttcgtgaaagtttatgctcgcgaaaaaacatttttttcatcaaattcgcg
aaagtaaatgtcgtaaattttgcgatttttcgaacttgcgaaagtttctg
cttgtaAGCCTAAAGTAATCAGAATGACTACCTTTCTCTCTTTATAGATG
ACATGCCGTTTGCAACCTGTTTCATTTGTAAACAGAAAGGACACCTTTCA
AGTAAATGTCCAGACAACCCAAGAGGTTTATATCCTGACGGTATGAGCTT
TTATTTTAGGAGCACAGATATACCAATAAGCCTGACAGGAGTTGTTTATc
agtgtaatacagtaatagaGGTGTTACAATAATATACGGGATAATATCCA
TATACGTATAAACTACACTTTGTCCCATCGattattttttgcttgattTC
TGGTATGTCTTATTCAAGAGGGCTCTTACTTGAAGTAACAcggtacagtt
gacgctctctaaatcgactttctactattcgatactctCCATAACTCGAT
AATATTGTAACTCACCATCagtaagaaactctcataaacgacgctcgcCT
ATTCTATTCGTTCTAATCCATTACTCGATTAAAATCCAATTTAAAATCGA
ATttgagagcgtcaactatatttatttttctaatgcCATGTTTCGTAGAA
TATTATCGAGCGTTTATTTCTCTCCTCATTTTTAGGTGGTGGTTGTCGAT
TTTGTGGTTCTGTTGAACATTATCGTCGAGATTGCCCAGAAAGGAACCCC
AACAAGAATAACGGTTCATAATATGTTTATCATTTATACGCAGTGCTATT
CTTTTCAACATGATAACACTGTATCTTTAGGGGTTTTTAGAGAGTTCacg
ttttgcttgcaacttacGAATTGGGGCGGATTGGGGTGTTTTTGATCGCT
TTGCGTTCCTCTGCCCTTGATTTTAgaaataacaataacaatattttcat
ttgttgaTCGTTTTATAGGTGAACGCAAACAAACGTTCAAGATGAGAACA
CAGGCTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAGACGATGA
AAGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTCGTCAAAT
TTTGATTGGGGAGATTTTAGTGTAATTCAGAAACGTCCATCCAACTTTAC
AGAATGTCTTGAGAAACATCATCTAATCATGTATTGTCAAAATAACGCGG
AGTGTAAAAGAAAAGTATCTTGATCGAATTACCGAGAGATAGACCTTGTT
CGCTTTGTTGACCACGTGGTATCAGGCATCATTTACCTGGAAAAAGTGTG
TAATATTAAAATGAATCAGAGTCAACTCCGATGGCTGACTTTGCTTTATT
CTGGTACAACGATAAACAATGGTTGTTGATTCACGTATTATAATTTTTCT
GGACAATTTGAGAACTCATTGTCTACACCAGACATGGCGTATGGTCATGG
TCAAAAGACTTTTCGACGATTGACGACCTCCTGGAGACCAATTAAAGTTT
TGGTTAAGGTCCAAGTCACTTTCCATAGAAAGCTACATTACTTTCATTTT
GTTGTCTTTTCATGTGTTTCATATACTcttgaaaagtaaattttaattct
aaagcttataacttgacaactTCTGGGCCAAATTTAGTATAGGTATAAAA
AGGTATAgtttaaaatttaagattttctcCCTTCTAGCAAAGGTAGCGTA
GTTCTTAACTAACGCTTAACACGCTTTTTGAGTCACAGTAGTATATTATT
TTTTATGGCTTCTTAACTAAATGATTTTTATAATTACTATTATTTTTTGG
GGATGCTTGAATTTAAACCTACTATATGTGGGTCTTAAAGATCAAACCAT
TATTCATAACTCGATCatgtctctttaattcgaacaaagTAGTTG Coding sequence (CDS) from alignment at sc0000507:32981..37275+ >TCONS_00024686 ID=TCONS_00024686|Name=TCONS_00024686|organism=Clytia hemisphaerica|type=CDS|length=3762bp|location=Sequence derived from alignment at sc0000507:32981..37275+ (Clytia hemisphaerica) ATGACACGATGGGCACGCTTCAAGAACAAACAAGAACATGATGCTTCTTC ATGGCAAGATTTGAAGAAAGCTAAACAACATAATCGAGGGAAGAATAACA AGGGCGGAAAGGAGGAAGAAATACCGGAATGGCTAGAGAAAAGAAGAGCT GCACGTCGTGAACGCAGAAAACGTGGGAAGCCATGCTTTCATTGTCGAGA ACCAGGCCATATGGCTGCAAGATGTCCGAAAAAAGGCGAAGGAGAAAGCG CACAAGACATTTGCTTCAAGTGTGGTTCAACGGAGCATAGCATCTATCAA TGCAAGAAAGACACCGGTGATGACATGCCGTTTGCAACCTGTTTCATTTG TAAACAGAAAGGACACCTTTCAAGTAAATGTCCAGACAACCCAAGAGGTT TATATCCTGACGGTGGTGGTTGTCGATTTTGTGGTTCTGTTGAACATTAT CGTCGAGATTGCCCAGAAAGGAACCCCAACAAGAATAACGGTGAACGCAA ACAAACGTTCAAGATGAGAACACAGGCTAAAGAGGAAAGTATAGAGGCTA TCGATAACTCATCAGACGATGAAAGTGATCATAATGAAGCGCCCAAACCA AAAAAAGCTAAAGTCGTCAAATTTTGAATGACACGATGGGCACGCTTCAA GAACAAACAAGAACATGATGCTTCTTCATGGCAAGATTTGAAGAAAGCTA AACAACATAATCGAGGGAAGAATAACAAGGGCGGAAAGGAGGAAGAAATA CCGGAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGCAGAAAACG TGGGAAGCCATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCAAGAT GTCCGAAAAAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAAGTGT GGTTCAACGGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTGATGA CATGCCGTTTGCAACCTGTTTCATTTGTAAACAGAAAGGACACCTTTCAA GTAAATGTCCAGACAACCCAAGAGGTTTATATCCTGACGGTGGTGGTTGT CGATTTTGTGGTTCTGTTGAACATTATCGTCGAGATTGCCCAGAAAGGAA CCCCAACAAGAATAACGGTGAACGCAAACAAACGTTCAAGATGAGAACAC AGGCTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAGACGATGAA AGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTCGTCAAATT TTGAATGACACGATGGGCACGCTTCAAGAACAAACAAGAACATGATGCTT CTTCATGGCAAGATTTGAAGAAAGCTAAACAACATAATCGAGGGAAGAAT AACAAGGGCGGAAAGGAGGAAGAAATACCGGAATGGCTAGAGAAAAGAAG AGCTGCACGTCGTGAACGCAGAAAACGTGGGAAGCCATGCTTTCATTGTC GAGAACCAGGCCATATGGCTGCAAGATGTCCGAAAAAAGGCGAAGGAGAA AGCGCACAAGACATTTGCTTCAAGTGTGGTTCAACGGAGCATAGCATCTA TCAATGCAAGAAAGACACCGGTGATGACATGCCGTTTGCAACCTGTTTCA TTTGTAAACAGAAAGGACACCTTTCAAGTAAATGTCCAGACAACCCAAGA GGTTTATATCCTGACGGTGGTGGTTGTCGATTTTGTGGTTCTGTTGAACA TTATCGTCGAGATTGCCCAGAAAGGAACCCCAACAAGAATAACGGTGAAC GCAAACAAACGTTCAAGATGAGAACACAGGCTAAAGAGGAAAGTATAGAG GCTATCGATAACTCATCAGACGATGAAAGTGATCATAATGAAGCGCCCAA ACCAAAAAAAGCTAAAGTCGTCAAATTTTGAATGACACGATGGGCACGCT TCAAGAACAAACAAGAACATGATGCTTCTTCATGGCAAGATTTGAAGAAA GCTAAACAACATAATCGAGGGAAGAATAACAAGGGCGGAAAGGAGGAAGA AATACCGGAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGCAGAA AACGTGGGAAGCCATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCA AGATGTCCGAAAAAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAA GTGTGGTTCAACGGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTG ATGACATGCCGTTTGCAACCTGTTTCATTTGTAAACAGAAAGGACACCTT TCAAGTAAATGTCCAGACAACCCAAGAGGTTTATATCCTGACGGTGGTGG TTGTCGATTTTGTGGTTCTGTTGAACATTATCGTCGAGATTGCCCAGAAA GGAACCCCAACAAGAATAACGGTGAACGCAAACAAACGTTCAAGATGAGA ACACAGGCTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAGACGA TGAAAGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTCGTCA AATTTTGAATGACACGATGGGCACGCTTCAAGAACAAACAAGAACATGAT GCTTCTTCATGGCAAGATTTGAAGAAAGCTAAACAACATAATCGAGGGAA GAATAACAAGGGCGGAAAGGAGGAAGAAATACCGGAATGGCTAGAGAAAA GAAGAGCTGCACGTCGTGAACGCAGAAAACGTGGGAAGCCATGCTTTCAT TGTCGAGAACCAGGCCATATGGCTGCAAGATGTCCGAAAAAAGGCGAAGG AGAAAGCGCACAAGACATTTGCTTCAAGTGTGGTTCAACGGAGCATAGCA TCTATCAATGCAAGAAAGACACCGGTGATGACATGCCGTTTGCAACCTGT TTCATTTGTAAACAGAAAGGACACCTTTCAAGTAAATGTCCAGACAACCC AAGAGGTTTATATCCTGACGGTGGTGGTTGTCGATTTTGTGGTTCTGTTG AACATTATCGTCGAGATTGCCCAGAAAGGAACCCCAACAAGAATAACGGT GAACGCAAACAAACGTTCAAGATGAGAACACAGGCTAAAGAGGAAAGTAT AGAGGCTATCGATAACTCATCAGACGATGAAAGTGATCATAATGAAGCGC CCAAACCAAAAAAAGCTAAAGTCGTCAAATTTTGAATGACACGATGGGCA CGCTTCAAGAACAAACAAGAACATGATGCTTCTTCATGGCAAGATTTGAA GAAAGCTAAACAACATAATCGAGGGAAGAATAACAAGGGCGGAAAGGAGG AAGAAATACCGGAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGC AGAAAACGTGGGAAGCCATGCTTTCATTGTCGAGAACCAGGCCATATGGC TGCAAGATGTCCGAAAAAAGGCGAAGGAGAAAGCGCACAAGACATTTGCT TCAAGTGTGGTTCAACGGAGCATAGCATCTATCAATGCAAGAAAGACACC GGTGATGACATGCCGTTTGCAACCTGTTTCATTTGTAAACAGAAAGGACA CCTTTCAAGTAAATGTCCAGACAACCCAAGAGGTTTATATCCTGACGGTG GTGGTTGTCGATTTTGTGGTTCTGTTGAACATTATCGTCGAGATTGCCCA GAAAGGAACCCCAACAAGAATAACGGTGAACGCAAACAAACGTTCAAGAT GAGAACACAGGCTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAG ACGATGAAAGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTC GTCAAATTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00024686-exon-sc0000507-1491911889:32981..33206 | TCONS_00024686-exon-sc0000507-1491911889:32981..33206 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1510915933:32981..33206 | TCONS_00024686-exon-sc0000507-1510915933:32981..33206 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1575043694:32981..33206 | TCONS_00024686-exon-sc0000507-1575043694:32981..33206 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1491911889:33613..33690 | TCONS_00024686-exon-sc0000507-1491911889:33613..33690 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1510915933:33613..33690 | TCONS_00024686-exon-sc0000507-1510915933:33613..33690 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1575043694:33613..33690 | TCONS_00024686-exon-sc0000507-1575043694:33613..33690 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1491911889:34580..34718 | TCONS_00024686-exon-sc0000507-1491911889:34580..34718 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1510915933:34580..34718 | TCONS_00024686-exon-sc0000507-1510915933:34580..34718 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1575043694:34580..34718 | TCONS_00024686-exon-sc0000507-1575043694:34580..34718 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1491911889:35528..35620 | TCONS_00024686-exon-sc0000507-1491911889:35528..35620 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1510915933:35528..35620 | TCONS_00024686-exon-sc0000507-1510915933:35528..35620 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1575043694:35528..35620 | TCONS_00024686-exon-sc0000507-1575043694:35528..35620 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1491911889:36066..36143 | TCONS_00024686-exon-sc0000507-1491911889:36066..36143 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1510915933:36066..36143 | TCONS_00024686-exon-sc0000507-1510915933:36066..36143 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1575043694:36066..36143 | TCONS_00024686-exon-sc0000507-1575043694:36066..36143 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1491911889:36349..37275 | TCONS_00024686-exon-sc0000507-1491911889:36349..37275 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1510915933:36349..37275 | TCONS_00024686-exon-sc0000507-1510915933:36349..37275 | Clytia hemisphaerica | exon |
| TCONS_00024686-exon-sc0000507-1575043694:36349..37275 | TCONS_00024686-exon-sc0000507-1575043694:36349..37275 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000507 | supercontig | sc0000507:32981..37275 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
| IPR001878 | Znf_CCHC |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00024686 vs. Swiss-Prot (Human)
Match: ZCHC9 (Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens GN=ZCCHC9 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.015e-32 Identity = 60/113 (53.10%), Postives = 72/113 (63.72%), Query Frame = 2
Query: 308 CFHCREPGHMAARCPKKGEGESA-QDICFKCGSTEHSIYQCKKDTG---DDMPFATCFICKQKGHLSSKCPDNPRGLYPDGGGCRFCGSVEHYRRDCPERNPNKNNGERKQTF 634
CFHCR+PGH A CP E + IC++CGSTEH I +CK + PFA CF+C + GHLS CPDNP+GLY DGGGC+ CGSVEH ++DCPE N ER T
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE----SQNSERMVTV 238
The following BLAST results are available for this feature:
|