XLOC_013856 (gene) - C. hemisphaerica

Overview
NameXLOC_013856
Unique NameXLOC_013856
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000507:32981..37275+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013856 ID=XLOC_013856|Name=XLOC_013856|organism=Clytia hemisphaerica|type=gene|length=4295bp|location=Sequence derived from alignment at sc0000507:32981..37275+ (Clytia hemisphaerica)
TCTTCTTACTATCTTTAGATTAAAGAAAGTTTAAAGGAAATAACtattat
ttgaagaaaaaaaataagacattacAGAGATTATTATACTTCTAAAGATG
GGAAAGAATTGAAAAGTGAACACGATGACACGATGGGCACGCTTCAAGAA
CAAACAAGAACATGATGCTTCTTCATGGCAAGATTTGAAGAAAGCTAAAC
AACATAATCGAGGGAAGAATAACAAGGTATCATTTTTATCCATGGACAAC
CAGTTCATCCCACCATATAGGCTATTCTTCAATAATAAACTCGAGGAAgt
cattgttttctttaattCGAGGAAACTGTTAAGGAAGTCATTTTGAAAGA
TTCAATTCCCCCTTCTGGGTTTTTACGGGAATGTAAGAGACAGTCTTGGA
CTTTCCTCTAAATTTCAAAGACTTTAAGGATAAAAATGTGGCATATTTTA
GTCCAACCCAAACAATCATTCAAAGTACACTctatgcaaagaaaaaaaat
cactatTACAGTTATTGGTAAATTCACGGTGAAAGGTTAAGTTTTTAACA
ACGCCGGAGTTTTTATTTGCACTTCTTCCTGCCTGTTTTAGCTTGAGTTT
CCAGCGTCAGTTTATGCTCTATTATTTTGTAGGGCGGAAAGGAGGAAGAA
ATACCGGAATGGCTAGAGAAAAGAAGAGCTGCACGTCGTGAACGCAGAAA
ACGTGGGAAGGTTTGATTTTACTTTACTCTTTGCTAACAAAATGAAGGTC
ATGAAAGAGTATTGTCAATGATACTGAACCTAACTTTCAACTTTTCTAAG
TTAAAAGTTAGTCAAATGTGACACAAGATATTGAAGTCAATTCGTTTTAA
GTGTGTTTGCTATTAAGTGTAAACCACGTCAGTTTAATTTGACTAATTGC
CTCTGGAGTGGTTTTCACAGGCGAGGGTAGCAAAAAAGAGAGCATAATAG
CACAACGCACCGaatctagtctacacaatagacagttccgggcttttagg
ccttactctttgtctataggcactgctataggcgggcggccactagtaac
ccccaccgagaattgcttattaatatgtttaaacataatagacaactttc
acaaaagatgtttatcaatagagatttcaaataaaagaatgctTAAAACA
Caactgattggcttaggtttccaaactctctattgttttattacaacctc
agtgcgcatgcgatttatctggagaatttcaatattccaaacaagagcag
tgctcatatcccgaagagtaggagttttacgctcgaaacggagggagata
tgacgtagcctaaccGAATCTAGAAATAGTAACAAATCTGCACAAATATA
CTTCGCTTGTACGACCTGCGATCCCATCCTCCTTTGCGTTAAATTGCTTT
TGTACGTTAATTAATTACAATATCAAAGGAAATGTAATAACTTTCACGGT
TTCCCAATCGTACAAATTTctagttgaaataattatgacgtGTAAGATGC
GGAACATAATTGATTTGAATAGACTGAAGGTCCTTTTGAAGTTCCGAGGA
TttactttattttgtttttgaaccttttcaaatttctttctttcttcagC
CATGCTTTCATTGTCGAGAACCAGGCCATATGGCTGCAAGATGTCCGAAA
AAAGGCGAAGGAGAAAGCGCACAAGACATTTGCTTCAAGTGTGGTTCAAC
GGAGCATAGCATCTATCAATGCAAGAAAGACACCGGTGGTATGTCGTATC
ttcatgatttcaaaaatttagatctGTTAAGTTTACCAATTTCACTCTGA
TTATTTACTGAGCATTTGTATTTGTAATTTGTCTTAAGTTAAGTTTAGTG
TTAAATCCAGTTAGCAGAGCAGTATTCGAATTTCTTTCAGAGTGGTGATC
TTTCTCCACTGTAAACGGTTATTAGTCTGAATGCTGAATGGAATCATAAA
AGACGGGTTAATCGTGAAAAAAGACTCTGCCCCTTGCCTATTTGAAACTG
CTAGGTATAATTGAAGTTTTATTATATCTAGACTACATTACTAGGAGCCC
CACGACAAGGCCTTTGTTTCAACTAAGATAAAAGTTCAAATAAACTCAGT
TTGTtctaggcgtacaaactttcgcgagcagaaactttcgcgattttcgc
gaattttggccttttcgTGAatgtaaatgtctttgaaaattcttaacggG
GTAATACGCGAAAGTTTATGTTCtcgaaaattctcaaaaaaatggaaatc
taataaaacctcgaaatcgtaatgaatatcaaattttcggcatattttta
tcctttaatgcctttttaaagtcgaagagcTACCGTCTTTATCAGATTTA
AAGAATATTTCTCACTTTTAAGGCAGAAAATTCccatttttatccaacga
ttcgtgaaagtttatgctcgcgaaaaaacatttttttcatcaaattcgcg
aaagtaaatgtcgtaaattttgcgatttttcgaacttgcgaaagtttctg
cttgtaAGCCTAAAGTAATCAGAATGACTACCTTTCTCTCTTTATAGATG
ACATGCCGTTTGCAACCTGTTTCATTTGTAAACAGAAAGGACACCTTTCA
AGTAAATGTCCAGACAACCCAAGAGGTTTATATCCTGACGGTATGAGCTT
TTATTTTAGGAGCACAGATATACCAATAAGCCTGACAGGAGTTGTTTATc
agtgtaatacagtaatagaGGTGTTACAATAATATACGGGATAATATCCA
TATACGTATAAACTACACTTTGTCCCATCGattattttttgcttgattTC
TGGTATGTCTTATTCAAGAGGGCTCTTACTTGAAGTAACAcggtacagtt
gacgctctctaaatcgactttctactattcgatactctCCATAACTCGAT
AATATTGTAACTCACCATCagtaagaaactctcataaacgacgctcgcCT
ATTCTATTCGTTCTAATCCATTACTCGATTAAAATCCAATTTAAAATCGA
ATttgagagcgtcaactatatttatttttctaatgcCATGTTTCGTAGAA
TATTATCGAGCGTTTATTTCTCTCCTCATTTTTAGGTGGTGGTTGTCGAT
TTTGTGGTTCTGTTGAACATTATCGTCGAGATTGCCCAGAAAGGAACCCC
AACAAGAATAACGGTTCATAATATGTTTATCATTTATACGCAGTGCTATT
CTTTTCAACATGATAACACTGTATCTTTAGGGGTTTTTAGAGAGTTCacg
ttttgcttgcaacttacGAATTGGGGCGGATTGGGGTGTTTTTGATCGCT
TTGCGTTCCTCTGCCCTTGATTTTAgaaataacaataacaatattttcat
ttgttgaTCGTTTTATAGGTGAACGCAAACAAACGTTCAAGATGAGAACA
CAGGCTAAAGAGGAAAGTATAGAGGCTATCGATAACTCATCAGACGATGA
AAGTGATCATAATGAAGCGCCCAAACCAAAAAAAGCTAAAGTCGTCAAAT
TTTGATTGGGGAGATTTTAGTGTAATTCAGAAACGTCCATCCAACTTTAC
AGAATGTCTTGAGAAACATCATCTAATCATGTATTGTCAAAATAACGCGG
AGTGTAAAAGAAAAGTATCTTGATCGAATTACCGAGAGATAGACCTTGTT
CGCTTTGTTGACCACGTGGTATCAGGCATCATTTACCTGGAAAAAGTGTG
TAATATTAAAATGAATCAGAGTCAACTCCGATGGCTGACTTTGCTTTATT
CTGGTACAACGATAAACAATGGTTGTTGATTCACGTATTATAATTTTTCT
GGACAATTTGAGAACTCATTGTCTACACCAGACATGGCGTATGGTCATGG
TCAAAAGACTTTTCGACGATTGACGACCTCCTGGAGACCAATTAAAGTTT
TGGTTAAGGTCCAAGTCACTTTCCATAGAAAGCTACATTACTTTCATTTT
GTTGTCTTTTCATGTGTTTCATATACTcttgaaaagtaaattttaattct
aaagcttataacttgacaactTCTGGGCCAAATTTAGTATAGGTATAAAA
AGGTATAgtttaaaatttaagattttctcCCTTCTAGCAAAGGTAGCGTA
GTTCTTAACTAACGCTTAACACGCTTTTTGAGTCACAGTAGTATATTATT
TTTTATGGCTTCTTAACTAAATGATTTTTATAATTACTATTATTTTTTGG
GGATGCTTGAATTTAAACCTACTATATGTGGGTCTTAAAGATCAAACCAT
TATTCATAACTCGATCatgtctctttaattcgaacaaagTAGTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024686TCONS_00024686Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024686-proteinTCONS_00024686-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000507supercontigsc0000507:32981..37275 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.97	59.06	31.21	25.9	41.45	32.78	47.84	47.64	44.08	35.31	31.36	35.18	21.66	19.52	24.41	27.74	45.61	40.48	14.92	19.02	30.28	30.82	43.03	36.65	22.96	24.53	17.06	17.85	20.37	22.17