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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024181 ID=TCONS_00024181|Name=TCONS_00024181|organism=Clytia hemisphaerica|type=transcript|length=3373bp
tttcatcaaaatttcggGACTTAGAACTTTACCTTGGAAACGGGAAAAAG
GCCCCTATGACGTCACGTGGTTGGCACTGCTTCGAATTTTAATCTAAATA
TCTTCGAATACTCCTATAAATAAAATGACTGACTCTTAACAAAATCCTTT
CGTTAAATTACTAGATAAATTAACAAATATGAAACATATACAATGGCTGG
CGCCAGTACAAGTATCCATTTAcatcaaaaacaactttttcgTGTCATTT
CGACAGGACAATACACTCTACACCAACTAGTAAATTATTTCGCTTTAACT
GTTGAACCAAATCCGGCTAATGATGGAGGCATAGCTTTGAGCAAAATTTT
TACTAAGAGAAAAGACAAGgtgaaaaatttctcaaacatTTCCAATGGGG
CTATCAAAGTGATATATATCGGTGACCGCGCAAACGGTATTTTCCAgcca
aaaatcaacattttagTGTTGGACACCAATCTCCTAGTTCAGATTCTCAG
AGGTATCGAAGATTTTCCAACATCCAACACTTATTTTCGTGCTGGTATTT
CTTGTAAAAACACTTCCAGCCATTTGAACAAATGTTGTCAAGGATGTAAC
CATGAGTGTATTTATTGTGGTAAAGACGAATGCAAGAAACAATGCCGCTG
TAGTCAAGAGAAAAGAAATTGTGGAAATCACCCatgcaaaatttgtaaat
cAACGAGATTCGACTGCAAGAGCAACAAATTCATCTGCTGTCAAAAATGT
AAAACTTGCCTACACTGTCTTTTGGCACGTTATAGATTGACTCATTGGCA
CCAACTTTTCAAACATTTAGTCGATGGGAGAATTACTGGTATTTGCGAAT
TTCGAGAATTGAGGTTTTCCATGTCTATTGTGGCTACCTTTCGGAACATA
ACCATGCACCTTACGTCGGCTGAATGCGATCAAATGGACACTGGAACCTT
TCAAGATCCAAATGTGCCATGGAAATCGTGGCTAGACATTCGAGATATTA
TTTGGTATGCAGTGAAATTCATGATAAACTTTTTAGCAAAACCTCTTCCA
AACCCAACGGCAAGTGCTCCACCGTACCCATCGTTGAGCATTCCTCCGAA
CCCAGTTATTACAAATTATGAAAAGGAAGATCTTTTGCAACTTTTACGCT
CTGTCTACATGGCAAGCAAACATGACGATCTCCCCATGTACAACAACTTG
CAACTAGAGCAATTTTCTTCCAACGAAAAACATCTAGTCAGTTTGCGCAA
GGCAGTAGATGATTGCAGGGTTGCAGTATCTGACAAacccttaaaaattg
aaatccatTTTCGGTTTTCGAAAAAGATGaaagattttgatttgaaatgc
aaaGAAGCTGCAAATATTAACcaaatctttaaagaaacatTACAAATTCA
TTTTGCTAAAGAATTCCCACACCAACCCAATGCATTTAGATCTGCACTTG
TTCACGTCGACAATGTAACAAAACCAAGTAAAGAATCAAAAACAATCCCG
TTAAAATTTGAGATTACATCATCAGAAATACCGTTGGATCAATACCGATA
TCAAGATGATCCATTGTCTGAGGCTCTTTGGAAAGATATTGAGAAAGAGC
TCTTGGACACCAAGCTACCGATCAAAAAAGTATCGCTCAAAGGCTGGGAA
AAAGGCTCTATTATCATTCATCTTTGCTTAGTCAGAGAGGGTGACTGTTA
CTGGTCCGAGGAAGAAATATCGAATGTTGATAAACTGTTGGTATCGTTTT
CGCAAATGGTTGAAAAGATAATGCCGCGTACACGATGTAAATGTCAGCGA
CTGCAAGAGCATCATTGGATGACTGACGAAGCATCTATCGGTGTGGCTAC
ATTTTGGGTCAATACCGACGAAGAGCATAAAGAGTTATTAAAAAAGGATG
AAGATAAAGTTGTCGAAAAACTATCACTCATTTTAGATGGACAGGAAAAT
AATGGTGTGTATATTGTACCCATCAAACCGAAATCAATTGTGGAGGATAT
TTCACTTGTTTCGGTAGATCAGGAACCAATCTGTCAACATCCCATTGATA
AAAACGTTCGAGAAAATAACACGGGTGAAAAGACAGAGCCAGCAAAAGTG
CAAGGATGCGTGGAAAAAGCGAACGCACGAAACCAAAACGGAGACGCTTT
ACACGAGGCCGCAAGAAAAGGATTAGACCAAGAGATTAAGGCGCTTTTAA
AGAAGGGGTTAAACGTTGATTCTTTGGATATGGAAGGAAACACACCACTT
TTTTACGCTTCCAATAATGGCCAAGCAGGGACAGCTGTCATTCTACTCAA
ATATGAAGCCAACGTGAATCACAAATCAAATCACGGTTTCACAGCGCTCA
TGCACGCCGCATGGAAAGGTCACGTTGATTTAGTATCGCTACTGATCGCA
CATGGTGCTGATGTAAAAATCGTTACCGCAAAGAACTATACGGCGTTATG
TTTCGCAACCTTAGGTGGTTTCGCAAAGGTGTCAATAATCTTACGCCAAG
CGGACAACATTCTCAAAGATACTAAAGCCCCTTTATCTATTGGATTCGGA
CAAAATCTGAGAATAAAGAACTTAGAACACAATGTGAAACAGAGAAGTCT
ATATGGTACCACAAGTTTAGCATTAGACATGTTTTtcgtaaaaactttac
aaaacagaaaaaaccgTCAGGAcagaaaatcgcgaaagttatGTCTAAGC
TCAAATTTGTTTAAATTTAAAACCGGATTGCAGGGTTCTCCCCATCTGCC
AGGGGCATAAATTAATTTATAGTAACGATTTGCATATatttgtaagcaaa
aaaatcGAATAGGAAAATgctaatttttataaaaattattaaatttttga
TACTAGGCTGTACTTAGTTTTTGGTATCTAGAGCCTCTAATTGTTCTCAT
ATAGGTATTTTAAGTATTGTATaccttttttactatttttcagCCCGCTC
AATGTTCTCAAgtggttcaaatttttttttgcctcgTTGATCATAAAGTT
TTTCTAACAAAATATAGTGCCGAGTAGGATTAAACAAAGAAGGGCAAACA
AAAATCTTACTTTATGGTTTCTTAGGGGGAAtatttctttaacttttttg
gggatCTTACTCTTCATGAGCTATGGCTTTTAGATTTCTGAAATCGGTAC
CGTAATTTTGTAATCGATCAACGTATCCACTTTCATTCTAAATCACATGT
TAAAAGGGAGCTCCTGATAATGTGATGGGTCGGTTTACAAAGTTGGTTGT
TTGTGTTTAAGAACCTGTTGTTTTCTACCAATAAGCCATTTTTCACTCCG
CTGTAAAAATTAGAGTAGGTagcaatttttataaaaaaatattttattca
gTAATATATAAAACAAAAGCGCC Run BLAST on NCBI protein sequence of TCONS_00024181-protein >TCONS_00024181-protein ID=TCONS_00024181-protein|Name=TCONS_00024181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=855bp
MAGASTSIHLHQKQLFRVISTGQYTLHQLVNYFALTVEPNPANDGGIALS
KIFTKRKDKVKNFSNISNGAIKVIYIGDRANGIFQPKINILVLDTNLLVQ
ILRGIEDFPTSNTYFRAGISCKNTSSHLNKCCQGCNHECIYCGKDECKKQ
CRCSQEKRNCGNHPCKICKSTRFDCKSNKFICCQKCKTCLHCLLARYRLT
HWHQLFKHLVDGRITGICEFRELRFSMSIVATFRNITMHLTSAECDQMDT
GTFQDPNVPWKSWLDIRDIIWYAVKFMINFLAKPLPNPTASAPPYPSLSI
PPNPVITNYEKEDLLQLLRSVYMASKHDDLPMYNNLQLEQFSSNEKHLVS
LRKAVDDCRVAVSDKPLKIEIHFRFSKKMKDFDLKCKEAANINQIFKETL
QIHFAKEFPHQPNAFRSALVHVDNVTKPSKESKTIPLKFEITSSEIPLDQ
YRYQDDPLSEALWKDIEKELLDTKLPIKKVSLKGWEKGSIIIHLCLVREG
DCYWSEEEISNVDKLLVSFSQMVEKIMPRTRCKCQRLQEHHWMTDEASIG
VATFWVNTDEEHKELLKKDEDKVVEKLSLILDGQENNGVYIVPIKPKSIV
EDISLVSVDQEPICQHPIDKNVRENNTGEKTEPAKVQGCVEKANARNQNG
DALHEAARKGLDQEIKALLKKGLNVDSLDMEGNTPLFYASNNGQAGTAVI
LLKYEANVNHKSNHGFTALMHAAWKGHVDLVSLLIAHGADVKIVTAKNYT
ALCFATLGGFAKVSIILRQADNILKDTKAPLSIGFGQNLRIKNLEHNVKQ
RSLYGTTSLALDMFFVKTLQNRKNRQDRKSRKLCLSSNLFKFKTGLQGSP
HLPGA Run BLAST on NCBI transcript from alignment at sc0000478:187100..191481+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024181 ID=TCONS_00024181|Name=TCONS_00024181|organism=Clytia hemisphaerica|type=transcript|length=4382bp|location=Sequence derived from alignment at sc0000478:187100..191481+ (Clytia hemisphaerica)
tttcatcaaaatttcggGACTTAGAACTTTACCTTGGAAACGGGAAAAAG
GCCCCTATGACGTCACGTGGTTGGCACTGCTTCGAATTTTAATCTAAATA
TCTTCGAATACTCCTATAAATAAAATGACTGACTCTTAACAAAATCCTTT
CGTTAAATTACTAGATAAATTAACAAATATGAAACATATACAATGGCTGG
CGCCAGTACAAGTATCCATTTAcatcaaaaacaactttttcgTGTCATTT
CGACAGGACAATACACTCTACACCAACTAGTAAATTATTTCGCTTTAACT
GTTGAACCAAATCCGGCTAATGATGGAGGCATAGCTTTGAGCAAAATTTT
TACTAAGAGAAAAGACAAGgtgaaaaatttctcaaacatTTCCAATGGGG
CTATCAAAGTGATATATATCGGTGACCGCGCAAACGGTATTTTCCAgcca
aaaatcaacattttagTGTTGGACACCAATCTCCTAGTTCAGATTCTCAG
AGGTATCGAAGATTTTCCAACATCCAACACTTATTTTCGTGCTGGTATTT
CTTGTAAAAACACTTCCAGCCATTTGAACAAATGTTGTCAAGGATGTAAC
CATGAGTGTATTTATTGTGGTAAAGACGAATGCAAGAAACAATGCCGCTG
TAGTCAAGAGAAAAGAAATTGTGGAAATCACCCatgcaaaatttgtaaat
cAACGAGATTCGACTGCAAGAGCAACAAATTCATCTGCTGTCAAAAATGT
AAAACTTGCCTACACTGTCTTTTGGCACGTTATAGATTGACTCATTGGCA
CCAACTTTTCAAACATTTAGTCGATGGGAGAATTACTGGTATTTGCGAAT
TTCGAGAATTGAGGTTTTCCATGTCTATTGTGGCTACCTTTCGGAACATA
ACCATGCACCTTACGTCGGCTGAATGCGATCAAATGGACACTGGAACCTT
TCAAGATCCAAATGTGCCATGGAAATCGTGGCTAGACATTCGAGATATTA
TTTGGTATGCAGTGAAATTCATGATAAACTTTTTAGCAAAACCTCTTCCA
AACCCAACGGCAAGTGCTCCACCGTACCCATCGTTGAGCATTCCTCCGAA
CCCAGTTATTACAAATTATGAAAAGGAAGATCTTTTGCAACTTTTACGCT
CTGTCTACATGGCAAGCAAACATGACGATCTCCCCATGTACAACAACTTG
CAACTAGAGCAATTTTCTTCCAACGAAAAACATCTAGTCAGTTTGCGCAA
GGCAGTAGATGATTGCAGGGTTGCAGTATCTGACAAacccttaaaaattg
aaatccatTTTCGGTTTTCGAAAAAGATGaaagattttgatttgaaatgc
aaaGAAGCTGCAAATATTAACcaaatctttaaagaaacatTACAAATTCA
TTTTGCTAAAGAATTCCCACACCAACCCAATGCATTTAGATCTGCACTTG
TTCACGTCGACAATGTAACAAAACCAAGTAAAGAATCAAAAACAATCCCG
TTAAAATTTGAGATTACATCATCAGAAATACCGTTGGATCAATACCGATA
TCAAGATGATCCATTGTCTGAGGCTCTTTGGAAAGATATTGAGAAAGAGC
TCTTGGACACCAAGCTACCGATCAAAAAAGTATCGCTCAAAGGCTGGGAA
AAAGGCTCTATTATCATTCATCTTTGCTTAGTCAGAGAGGGTGACTGTTA
CTGGTCCGAGGAAGAAATATCGAATGTTGATAAACTGTTGGTATCGTTTT
CGCAAATGGTTGAAAAGATAATGCCGCGTACACGATGTAAATGTCAGCGA
CTGCAAGAGCATCATTGGATGACTGACGAAGCATCTATCGGTGTGGCTAC
ATTTTGGGTCAATACCGACGAAGAGCATAAAGAGTTATTAAAAAAGGATG
AAGATAAAGTTGTCGAAAAACTATCACTCATTTTAGATGGACAGGAAAAT
AATGGTGTGTGTAAGTATTGTAATATATTCTCCTAATTTAGATTCATAAT
TTTAATGTCCCCATTGATTGCAGACTTTTAtgtaaagtaagtaagtctgc
gacggTAGTAGGAgacgacccgaaggctcctcttttgatAGATATCTACC
CGAAGATAGAAGAGGACACCACTCTTTCTCCccggattgctccacttact
tTTGATCCTCTCATTAATTGCCGAGAATCgggcagagaggcatcaagtac
cattcaggagaagtctttggtatgatctggccagggattgaacccacgac
ctaaagtaaaatcctcataatttatgCCAAGTTTTACGACTTGTTTACTT
AATACCTCAATCTCAAAAACATATTCGACGATCatgggaattgaatatct
atttaATGAACAGAGAGTtgtaatcttttttcaattattctaaGCCCAGT
TTAAATAACGAGTTTTGAGGATTTCACTTTATACAAAATTCTGTCCACTT
TTTTAGGGACATACTGTATAAACTGCTAAATCCTAAAacatttcttcaat
ttctttaaGATATTGTACCCATCAAACCGAAATCAATTGTGGAGGATATT
TCACTTGTTTCGGTAGATCAGGAACCAATCTGTCAACATCCCATTGGTAA
GTACATATAGTTATGGGCAAACCATTAAATAGCATAAGCCCCTTGACGCC
AGTCCTTAACCCGCCACAGCCAAATAGGTGCCTACGACGATAAAAGCAAT
GGGCTcttgcaaaaaaaatatatacccCCACCCTTATTTTGAGGAGTTCT
TTTTGGAGAAggtgaccccctggatattttttcaattttcaggacccact
tattttgattattaaaatttgaagatttggtACTATACTACCCATCAAGA
TCAGGAAACACTCCCACGAAGCTTATCTTTCAGTAAGCATAATCAACTTG
AATATCCAAAACGATTTccaaaatcttgtttttaaacAAATGATGGCTAA
ATATCTCTATGCTTCTTTTTCCAGATAAAAACGTTCGAGAAAATAACACG
GGTGAAAAGACAGAACCAGCAAAAGNGGCTAAATATCTCTATGCTTCTTT
TTCCAGATAAAAACGTTCGAGAAAATAACACGGGTGAAAAGACAGAGCCA
GCAAAAGTGCAAGGATGCGTGGAAAAAGCGAACGCACGAAACCAAAACGG
AGACGCTTTACACGAGGCCGCAAGAAAAGGATTAGACCAAGAGATTAAGG
CGCTTTTAAAGAAGGGGTTAAACGTTGATTCTTTGGATATGGAAGGAAAC
ACACCACTTTTTTACGCTTCCAATAATGGCCAAGCAGGGACAGCTGTCAT
TCTACTCAAATATGAAGCCAACGTGAATCACAAATCAAATCACGGTTTCA
CAGCGCTCATGCACGCCGCATGGAAAGGTCACGTTGATTTAGTATCGCTA
CTGATCGCACATGGTGCTGATGTAAAAATCGTTACCGCAAAGAACTATAC
GGCGTTATGTTTCGCAACCTTAGGTGGTTTCGCAAAGGTGTCAATAATCT
TACGCCAAGCGGACAACATTCTCAAAGATACTAAAGCCCCTTTATCTATT
GGATTCGGACAAAATCTGAGAATAAAGAACTTAGAACACAATGTGAAACA
GAGAAGTCTATATGGTACCACAAGTTTAGCATTAGACATGTTTTtcgtaa
aaactttacaaaacagaaaaaaccgTCAGGAcagaaaatcgcgaaagtta
tGTCTAAGCTCAAATTTGTTTAAATTTAAAACCGGATTGCAGGGTTCTCC
CCATCTGCCAGGGGCATAAATTAATTTATAGTAACGATTTGCATATattt
gtaagcaaaaaaatcGAATAGGAAAATgctaatttttataaaaattatta
aatttttgaTACTAGGCTGTACTTAGTTTTTGGTATCTAGAGCCTCTAAT
TGTTCTCATATAGGTATTTTAAGTATTGTATaccttttttactatttttc
agCCCGCTCAATGTTCTCAAgtggttcaaatttttttttgcctcgTTGAT
CATAAAGTTTTTCTAACAAAATATAGTGCCGAGTAGGATTAAACAAAGAA
GGGCAAACAAAAATCTTACTTTATGGTTTCTTAGGGGGAAtatttcttta
acttttttggggatCTTACTCTTCATGAGCTATGGCTTTTAGATTTCTGA
AATCGGTACCGTAATTTTGTAATCGATCAACGTATCCACTTTCATTCTAA
ATCACATGTTAAAAGGGAGCTCCTGATAATGTGATGGGTCGGTTTACAAA
GTTGGTTGTTTGTGTTTAAGAACCTGTTGTTTTCTACCAATAAGCCATTT
TTCACTCCGCTGTAAAAATTAGAGTAGGTagcaatttttataaaaaaata
ttttattcagTAATATATAAAACAAAAGCGCC Coding sequence (CDS) from alignment at sc0000478:187100..191481+ >TCONS_00024181 ID=TCONS_00024181|Name=TCONS_00024181|organism=Clytia hemisphaerica|type=CDS|length=7704bp|location=Sequence derived from alignment at sc0000478:187100..191481+ (Clytia hemisphaerica)
ATGGCTGGCGCCAGTACAAGTATCCATTTAcatcaaaaacaactttttcg
TGTCATTTCGACAGGACAATACACTCTACACCAACTAGTAAATTATTTCG
CTTTAACTGTTGAACCAAATCCGGCTAATGATGGAGGCATAGCTTTGAGC
AAAATTTTTACTAAGAGAAAAGACAAGgtgaaaaatttctcaaacatTTC
CAATGGGGCTATCAAAGTGATATATATCGGTGACCGCGCAAACGGTATTT
TCCAgccaaaaatcaacattttagTGTTGGACACCAATCTCCTAGTTCAG
ATTCTCAGAGGTATCGAAGATTTTCCAACATCCAACACTTATTTTCGTGC
TGGTATTTCTTGTAAAAACACTTCCAGCCATTTGAACAAATGTTGTCAAG
GATGTAACCATGAGTGTATTTATTGTGGTAAAGACGAATGCAAGAAACAA
TGCCGCTGTAGTCAAGAGAAAAGAAATTGTGGAAATCACCCatgcaaaat
ttgtaaatcAACGAGATTCGACTGCAAGAGCAACAAATTCATCTGCTGTC
AAAAATGTAAAACTTGCCTACACTGTCTTTTGGCACGTTATAGATTGACT
CATTGGCACCAACTTTTCAAACATTTAGTCGATGGGAGAATTACTGGTAT
TTGCGAATTTCGAGAATTGAGGTTTTCCATGTCTATTGTGGCTACCTTTC
GGAACATAACCATGCACCTTACGTCGGCTGAATGCGATCAAATGGACACT
GGAACCTTTCAAGATCCAAATGTGCCATGGAAATCGTGGCTAGACATTCG
AGATATTATTTGGTATGCAGTGAAATTCATGATAAACTTTTTAGCAAAAC
CTCTTCCAAACCCAACGGCAAGTGCTCCACCGTACCCATCGTTGAGCATT
CCTCCGAACCCAGTTATTACAAATTATGAAAAGGAAGATCTTTTGCAACT
TTTACGCTCTGTCTACATGGCAAGCAAACATGACGATCTCCCCATGTACA
ACAACTTGCAACTAGAGCAATTTTCTTCCAACGAAAAACATCTAGTCAGT
TTGCGCAAGGCAGTAGATGATTGCAGGGTTGCAGTATCTGACAAaccctt
aaaaattgaaatccatTTTCGGTTTTCGAAAAAGATGaaagattttgatt
tgaaatgcaaaGAAGCTGCAAATATTAACcaaatctttaaagaaacatTA
CAAATTCATTTTGCTAAAGAATTCCCACACCAACCCAATGCATTTAGATC
TGCACTTGTTCACGTCGACAATGTAACAAAACCAAGTAAAGAATCAAAAA
CAATCCCGTTAAAATTTGAGATTACATCATCAGAAATACCGTTGGATCAA
TACCGATATCAAGATGATCCATTGTCTGAGGCTCTTTGGAAAGATATTGA
GAAAGAGCTCTTGGACACCAAGCTACCGATCAAAAAAGTATCGCTCAAAG
GCTGGGAAAAAGGCTCTATTATCATTCATCTTTGCTTAGTCAGAGAGGGT
GACTGTTACTGGTCCGAGGAAGAAATATCGAATGTTGATAAACTGTTGGT
ATCGTTTTCGCAAATGGTTGAAAAGATAATGCCGCGTACACGATGTAAAT
GTCAGCGACTGCAAGAGCATCATTGGATGACTGACGAAGCATCTATCGGT
GTGGCTACATTTTGGGTCAATACCGACGAAGAGCATAAAGAGTTATTAAA
AAAGGATGAAGATAAAGTTGTCGAAAAACTATCACTCATTTTAGATGGAC
AGGAAAATAATGGTGTGTATATTGTACCCATCAAACCGAAATCAATTGTG
GAGGATATTTCACTTGTTTCGGTAGATCAGGAACCAATCTGTCAACATCC
CATTGATAAAAACGTTCGAGAAAATAACACGGGTGAAAAGACAGAGCCAG
CAAAAGTGCAAGGATGCGTGGAAAAAGCGAACGCACGAAACCAAAACGGA
GACGCTTTACACGAGGCCGCAAGAAAAGGATTAGACCAAGAGATTAAGGC
GCTTTTAAAGAAGGGGTTAAACGTTGATTCTTTGGATATGGAAGGAAACA
CACCACTTTTTTACGCTTCCAATAATGGCCAAGCAGGGACAGCTGTCATT
CTACTCAAATATGAAGCCAACGTGAATCACAAATCAAATCACGGTTTCAC
AGCGCTCATGCACGCCGCATGGAAAGGTCACGTTGATTTAGTATCGCTAC
TGATCGCACATGGTGCTGATGTAAAAATCGTTACCGCAAAGAACTATACG
GCGTTATGTTTCGCAACCTTAGGTGGTTTCGCAAAGGTGTCAATAATCTT
ACGCCAAGCGGACAACATTCTCAAAGATACTAAAGCCCCTTTATCTATTG
GATTCGGACAAAATCTGAGAATAAAGAACTTAGAACACAATGTGAAACAG
AGAAGTCTATATGGTACCACAAGTTTAGCATTAGACATGTTTTtcgtaaa
aactttacaaaacagaaaaaaccgTCAGGAcagaaaatcgcgaaagttat
GTCTAAGCTCAAATTTGTTTAAATTTAAAACCGGATTGCAGGGTTCTCCC
CATCTGCCAGGGGCATAAATGGCTGGCGCCAGTACAAGTATCCATTTAca
tcaaaaacaactttttcgTGTCATTTCGACAGGACAATACACTCTACACC
AACTAGTAAATTATTTCGCTTTAACTGTTGAACCAAATCCGGCTAATGAT
GGAGGCATAGCTTTGAGCAAAATTTTTACTAAGAGAAAAGACAAGgtgaa
aaatttctcaaacatTTCCAATGGGGCTATCAAAGTGATATATATCGGTG
ACCGCGCAAACGGTATTTTCCAgccaaaaatcaacattttagTGTTGGAC
ACCAATCTCCTAGTTCAGATTCTCAGAGGTATCGAAGATTTTCCAACATC
CAACACTTATTTTCGTGCTGGTATTTCTTGTAAAAACACTTCCAGCCATT
TGAACAAATGTTGTCAAGGATGTAACCATGAGTGTATTTATTGTGGTAAA
GACGAATGCAAGAAACAATGCCGCTGTAGTCAAGAGAAAAGAAATTGTGG
AAATCACCCatgcaaaatttgtaaatcAACGAGATTCGACTGCAAGAGCA
ACAAATTCATCTGCTGTCAAAAATGTAAAACTTGCCTACACTGTCTTTTG
GCACGTTATAGATTGACTCATTGGCACCAACTTTTCAAACATTTAGTCGA
TGGGAGAATTACTGGTATTTGCGAATTTCGAGAATTGAGGTTTTCCATGT
CTATTGTGGCTACCTTTCGGAACATAACCATGCACCTTACGTCGGCTGAA
TGCGATCAAATGGACACTGGAACCTTTCAAGATCCAAATGTGCCATGGAA
ATCGTGGCTAGACATTCGAGATATTATTTGGTATGCAGTGAAATTCATGA
TAAACTTTTTAGCAAAACCTCTTCCAAACCCAACGGCAAGTGCTCCACCG
TACCCATCGTTGAGCATTCCTCCGAACCCAGTTATTACAAATTATGAAAA
GGAAGATCTTTTGCAACTTTTACGCTCTGTCTACATGGCAAGCAAACATG
ACGATCTCCCCATGTACAACAACTTGCAACTAGAGCAATTTTCTTCCAAC
GAAAAACATCTAGTCAGTTTGCGCAAGGCAGTAGATGATTGCAGGGTTGC
AGTATCTGACAAacccttaaaaattgaaatccatTTTCGGTTTTCGAAAA
AGATGaaagattttgatttgaaatgcaaaGAAGCTGCAAATATTAACcaa
atctttaaagaaacatTACAAATTCATTTTGCTAAAGAATTCCCACACCA
ACCCAATGCATTTAGATCTGCACTTGTTCACGTCGACAATGTAACAAAAC
CAAGTAAAGAATCAAAAACAATCCCGTTAAAATTTGAGATTACATCATCA
GAAATACCGTTGGATCAATACCGATATCAAGATGATCCATTGTCTGAGGC
TCTTTGGAAAGATATTGAGAAAGAGCTCTTGGACACCAAGCTACCGATCA
AAAAAGTATCGCTCAAAGGCTGGGAAAAAGGCTCTATTATCATTCATCTT
TGCTTAGTCAGAGAGGGTGACTGTTACTGGTCCGAGGAAGAAATATCGAA
TGTTGATAAACTGTTGGTATCGTTTTCGCAAATGGTTGAAAAGATAATGC
CGCGTACACGATGTAAATGTCAGCGACTGCAAGAGCATCATTGGATGACT
GACGAAGCATCTATCGGTGTGGCTACATTTTGGGTCAATACCGACGAAGA
GCATAAAGAGTTATTAAAAAAGGATGAAGATAAAGTTGTCGAAAAACTAT
CACTCATTTTAGATGGACAGGAAAATAATGGTGTGTATATTGTACCCATC
AAACCGAAATCAATTGTGGAGGATATTTCACTTGTTTCGGTAGATCAGGA
ACCAATCTGTCAACATCCCATTGATAAAAACGTTCGAGAAAATAACACGG
GTGAAAAGACAGAGCCAGCAAAAGTGCAAGGATGCGTGGAAAAAGCGAAC
GCACGAAACCAAAACGGAGACGCTTTACACGAGGCCGCAAGAAAAGGATT
AGACCAAGAGATTAAGGCGCTTTTAAAGAAGGGGTTAAACGTTGATTCTT
TGGATATGGAAGGAAACACACCACTTTTTTACGCTTCCAATAATGGCCAA
GCAGGGACAGCTGTCATTCTACTCAAATATGAAGCCAACGTGAATCACAA
ATCAAATCACGGTTTCACAGCGCTCATGCACGCCGCATGGAAAGGTCACG
TTGATTTAGTATCGCTACTGATCGCACATGGTGCTGATGTAAAAATCGTT
ACCGCAAAGAACTATACGGCGTTATGTTTCGCAACCTTAGGTGGTTTCGC
AAAGGTGTCAATAATCTTACGCCAAGCGGACAACATTCTCAAAGATACTA
AAGCCCCTTTATCTATTGGATTCGGACAAAATCTGAGAATAAAGAACTTA
GAACACAATGTGAAACAGAGAAGTCTATATGGTACCACAAGTTTAGCATT
AGACATGTTTTtcgtaaaaactttacaaaacagaaaaaaccgTCAGGAca
gaaaatcgcgaaagttatGTCTAAGCTCAAATTTGTTTAAATTTAAAACC
GGATTGCAGGGTTCTCCCCATCTGCCAGGGGCATAAATGGCTGGCGCCAG
TACAAGTATCCATTTAcatcaaaaacaactttttcgTGTCATTTCGACAG
GACAATACACTCTACACCAACTAGTAAATTATTTCGCTTTAACTGTTGAA
CCAAATCCGGCTAATGATGGAGGCATAGCTTTGAGCAAAATTTTTACTAA
GAGAAAAGACAAGgtgaaaaatttctcaaacatTTCCAATGGGGCTATCA
AAGTGATATATATCGGTGACCGCGCAAACGGTATTTTCCAgccaaaaatc
aacattttagTGTTGGACACCAATCTCCTAGTTCAGATTCTCAGAGGTAT
CGAAGATTTTCCAACATCCAACACTTATTTTCGTGCTGGTATTTCTTGTA
AAAACACTTCCAGCCATTTGAACAAATGTTGTCAAGGATGTAACCATGAG
TGTATTTATTGTGGTAAAGACGAATGCAAGAAACAATGCCGCTGTAGTCA
AGAGAAAAGAAATTGTGGAAATCACCCatgcaaaatttgtaaatcAACGA
GATTCGACTGCAAGAGCAACAAATTCATCTGCTGTCAAAAATGTAAAACT
TGCCTACACTGTCTTTTGGCACGTTATAGATTGACTCATTGGCACCAACT
TTTCAAACATTTAGTCGATGGGAGAATTACTGGTATTTGCGAATTTCGAG
AATTGAGGTTTTCCATGTCTATTGTGGCTACCTTTCGGAACATAACCATG
CACCTTACGTCGGCTGAATGCGATCAAATGGACACTGGAACCTTTCAAGA
TCCAAATGTGCCATGGAAATCGTGGCTAGACATTCGAGATATTATTTGGT
ATGCAGTGAAATTCATGATAAACTTTTTAGCAAAACCTCTTCCAAACCCA
ACGGCAAGTGCTCCACCGTACCCATCGTTGAGCATTCCTCCGAACCCAGT
TATTACAAATTATGAAAAGGAAGATCTTTTGCAACTTTTACGCTCTGTCT
ACATGGCAAGCAAACATGACGATCTCCCCATGTACAACAACTTGCAACTA
GAGCAATTTTCTTCCAACGAAAAACATCTAGTCAGTTTGCGCAAGGCAGT
AGATGATTGCAGGGTTGCAGTATCTGACAAacccttaaaaattgaaatcc
atTTTCGGTTTTCGAAAAAGATGaaagattttgatttgaaatgcaaaGAA
GCTGCAAATATTAACcaaatctttaaagaaacatTACAAATTCATTTTGC
TAAAGAATTCCCACACCAACCCAATGCATTTAGATCTGCACTTGTTCACG
TCGACAATGTAACAAAACCAAGTAAAGAATCAAAAACAATCCCGTTAAAA
TTTGAGATTACATCATCAGAAATACCGTTGGATCAATACCGATATCAAGA
TGATCCATTGTCTGAGGCTCTTTGGAAAGATATTGAGAAAGAGCTCTTGG
ACACCAAGCTACCGATCAAAAAAGTATCGCTCAAAGGCTGGGAAAAAGGC
TCTATTATCATTCATCTTTGCTTAGTCAGAGAGGGTGACTGTTACTGGTC
CGAGGAAGAAATATCGAATGTTGATAAACTGTTGGTATCGTTTTCGCAAA
TGGTTGAAAAGATAATGCCGCGTACACGATGTAAATGTCAGCGACTGCAA
GAGCATCATTGGATGACTGACGAAGCATCTATCGGTGTGGCTACATTTTG
GGTCAATACCGACGAAGAGCATAAAGAGTTATTAAAAAAGGATGAAGATA
AAGTTGTCGAAAAACTATCACTCATTTTAGATGGACAGGAAAATAATGGT
GTGTATATTGTACCCATCAAACCGAAATCAATTGTGGAGGATATTTCACT
TGTTTCGGTAGATCAGGAACCAATCTGTCAACATCCCATTGATAAAAACG
TTCGAGAAAATAACACGGGTGAAAAGACAGAGCCAGCAAAAGTGCAAGGA
TGCGTGGAAAAAGCGAACGCACGAAACCAAAACGGAGACGCTTTACACGA
GGCCGCAAGAAAAGGATTAGACCAAGAGATTAAGGCGCTTTTAAAGAAGG
GGTTAAACGTTGATTCTTTGGATATGGAAGGAAACACACCACTTTTTTAC
GCTTCCAATAATGGCCAAGCAGGGACAGCTGTCATTCTACTCAAATATGA
AGCCAACGTGAATCACAAATCAAATCACGGTTTCACAGCGCTCATGCACG
CCGCATGGAAAGGTCACGTTGATTTAGTATCGCTACTGATCGCACATGGT
GCTGATGTAAAAATCGTTACCGCAAAGAACTATACGGCGTTATGTTTCGC
AACCTTAGGTGGTTTCGCAAAGGTGTCAATAATCTTACGCCAAGCGGACA
ACATTCTCAAAGATACTAAAGCCCCTTTATCTATTGGATTCGGACAAAAT
CTGAGAATAAAGAACTTAGAACACAATGTGAAACAGAGAAGTCTATATGG
TACCACAAGTTTAGCATTAGACATGTTTTtcgtaaaaactttacaaaaca
gaaaaaaccgTCAGGAcagaaaatcgcgaaagttatGTCTAAGCTCAAAT
TTGTTTAAATTTAAAACCGGATTGCAGGGTTCTCCCCATCTGCCAGGGGC
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024181-exon-sc0000478-1491911889:187100..189059 | TCONS_00024181-exon-sc0000478-1491911889:187100..189059 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1510915933:187100..189059 | TCONS_00024181-exon-sc0000478-1510915933:187100..189059 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1575043694:187100..189059 | TCONS_00024181-exon-sc0000478-1575043694:187100..189059 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1491911889:189609..189695 | TCONS_00024181-exon-sc0000478-1491911889:189609..189695 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1510915933:189609..189695 | TCONS_00024181-exon-sc0000478-1510915933:189609..189695 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1575043694:189609..189695 | TCONS_00024181-exon-sc0000478-1575043694:189609..189695 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1491911889:190156..191481 | TCONS_00024181-exon-sc0000478-1491911889:190156..191481 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1510915933:190156..191481 | TCONS_00024181-exon-sc0000478-1510915933:190156..191481 | Clytia hemisphaerica | exon |
| TCONS_00024181-exon-sc0000478-1575043694:190156..191481 | TCONS_00024181-exon-sc0000478-1575043694:190156..191481 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000478 | supercontig | sc0000478:187100..191481 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00024181 vs. Swiss-Prot (Human)
Match: ANK2 (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4) HSP 1 Score: 86.6557 bits (213), Expect = 7.870e-17 Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 2122 NARNQNG-DALHEAARKGLDQEIKALLKKGLNVDSLDMEGNTPLFYASNNGQAGTAVILLKYEANVNHKSNHGFTALMHAAWKGHVDLVSLLIAHGADVKIVTAKNYTALCFATLGGFAKVSIILRQADN 2508
N NQNG +ALH AA++G ++ LL +G +VDS +GNT L AS GQA +L+K AN+N +S +GFT L AA + H+D+V L+ +GA+ T +T L A G + IL + D
Sbjct: 58 NTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLAVALQQGHNQAVAILLENDT 187
The following BLAST results are available for this feature:
|
