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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024076 ID=TCONS_00024076|Name=TCONS_00024076|organism=Clytia hemisphaerica|type=transcript|length=2463bp
agaaaaaaatgaattccaGTTTTCACCGGCAACTGGTTTACGTTACAAAA
CGCGTTCTTGCTCCACCACAACTTCAATTATCATGTCGTGCTTGCTCAAC
CAATTTGGTGCAGGCGTCACTTGAAGACAAACAGATGGAACGGTTTATCC
CTATGACGCGACGTACGTTGTTACGCAAACTGACGGAAAACACGCATTTA
GTGGCGCCCGATGAAAGAGAGCAGTATATAGAATTCGTGAAAGGTTTAGA
AAGTTCCATATCTCATCAGTTCCACGGATCACTAAAAGAGCTAAAGcaAT
TATACGACCCGTTGAACCCTGACAAGGAAACCTTAGTCGGCCTTCACATC
AACAAGAAGGAGAAACAGGAGCAAGAATTCTGGCTACTTCAAAAACTTTC
ATTGCTACTTGAGAAGGcacattttcaagaaattcCGCGAAATGACGTTG
CAAAGGCGTTAGAAGACCACCCTTGCTATGAGGGCGTCATGGTCAAAGTT
GacatgaaaaaatttgacgtcatcAAGTTTTGGGCGTTAGGTGAAGAAGA
GGTTCCATTGCATTATGATAATTTTCGTGAACGAATCCGCAATCAAATGT
ATGTTTACATGAAGCAGTGGCCCAAAAACATGTCCACGTATAAACGGGTG
GTCGTTGCTGTCCGCtcgaaaaaacaaaacaaacttttcttGAAAGCTTT
CAAAGATATTCCAACGAATGGACTAGAATACATCTTACCTGAAGGCAAGA
TCTCTATTTCCAAGTTTGATGCAGGATTGATGGCAACTGGTGTCACAATC
GGAGCGCTCAGCGTGGGCGCGCGATTACTATCGTCCGCTGCAGATATGAA
TTTGTCATGGACCTCCATCGTTGGCGGAATGACCGCCCTTTTGGCGTTGC
AATCATGGAGTGCTTACAAAAATAAACGAAACAAATATTTAGTGGAACTC
GCAAAGACATTTTATTACAAAGCATTAGCGAACAATCGTGCTTTGTTGAC
TTTGGTGACTGATAGAGCTGAAGATGAAGTTTTCAAGGCTTCCTTGCTTG
CGTACACCTTCATCCTCAAAGAAAATATCCTCAGAGAAACGAAAAACTCT
ACAGTAGCGAATACACTGCACATGGATCAACTCGTCTCCGTTCGAGAATT
GAACGATTCCATTGAACATTGGATGAGCGAACGGTATGATGTCAATATTC
ATTTCGACGGAAGGAATGCTCTCCAGCAACTCGAACAACTAGGATTGCTC
AAATCACAAAAATTAGGTGAGGAGGTCCATTTAACAGTGAAATCATTGGC
CGATTCCATTCGATCGTTACCCATGGTAACGAGCAGCCTCGATGTGGAGG
AGGACCGTGAAGAAGAACTTGACCTTGAACAAATTGTGCCGGTTACTGAT
ACTGAAATTGCTGACGTGGCATCCAGAGTGAAACAAAGGGAAGCTGAATT
TGCATCTCCGGGTTGGCAATGAAAACGTTTAACGTTTTCGGGTTGGCAAT
AAAAACGACCACGTCGCCGGGTTGATAATGAAAACGTATCACGTCTCTAC
AAATTCGATTCGTCAATGTGTCCATACTATGGTTGGTGCCAAAGTGAACT
AACAATGTTTCAGTGTGGTTTCTTATCGACGTATTctgagatgaataaaa
ttttgGGAATGAAATATTGTTCCTGCCAATTTTTCACACTATAATTACAC
ACGGACACTCTATTTGgagatttaaatatttttatgaatttcacATCAAC
ACTCGCATTATGCACAAACAAAAGCTAGAATATTTAAACGGGATGAAATT
TTGTGGAGATTAAAATTTTGTGGAGATTAAAATTTTGTTGAGATATACGC
TATTTTCGAAGAACCTGTAAAGGCTCGACGGCTCTTATTTTTTTCGTgat
taaatttaaaagtttAGATTTTCGttaatgttcattttttttttatagac
ttactcaaaaaaaattctgggTCAAAAAACCTTTTCACTACTGAATTTCG
CTGATGGCACCTAAATCTGCAATATCCGCAAAATATAATCCCCGCAAAAT
TTATCCcattgaaaaattatcaattaaaatttggaataatttttccttga
aaatatgTTCATTGCTATGCTATGTTCCTAATAAATTAGTTAAGTTAATT
TGACCAGACTTAGCAGATATTTATAAAACCTGCCAAATTAAATACTTGCC
AAATTCATTAAAAGTCATAACAATGGCATCTATTCAATATATCGACATTT
TATGAAAATCAGTATTTTTAGTCCACTACTAGAGAGAAATATTTGGTTAA
GATCGGTGTCTAACATTTTCTCACATAACAAATTAAATCCCTGTGAAAAG
TAGCATATTGACCAACCCCAAAATCAATAAATCGATCTCTTTAGGTAGTT
TCTTCCGTCATGTCTTAAGATGGCTTTAATTAAAATGTGCCTATTACAAG
TTTAACAGttata Run BLAST on NCBI protein sequence of TCONS_00024076-protein >TCONS_00024076-protein ID=TCONS_00024076-protein|Name=TCONS_00024076-protein|organism=Clytia hemisphaerica|type=polypeptide|length=489bp
KKMNSSFHRQLVYVTKRVLAPPQLQLSCRACSTNLVQASLEDKQMERFIP
MTRRTLLRKLTENTHLVAPDEREQYIEFVKGLESSISHQFHGSLKELKQL
YDPLNPDKETLVGLHINKKEKQEQEFWLLQKLSLLLEKAHFQEIPRNDVA
KALEDHPCYEGVMVKVDMKKFDVIKFWALGEEEVPLHYDNFRERIRNQMY
VYMKQWPKNMSTYKRVVVAVRSKKQNKLFLKAFKDIPTNGLEYILPEGKI
SISKFDAGLMATGVTIGALSVGARLLSSAADMNLSWTSIVGGMTALLALQ
SWSAYKNKRNKYLVELAKTFYYKALANNRALLTLVTDRAEDEVFKASLLA
YTFILKENILRETKNSTVANTLHMDQLVSVRELNDSIEHWMSERYDVNIH
FDGRNALQQLEQLGLLKSQKLGEEVHLTVKSLADSIRSLPMVTSSLDVEE
DREEELDLEQIVPVTDTEIADVASRVKQREAEFASPGWQ Run BLAST on NCBI transcript from alignment at sc0000474:10898..14705- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024076 ID=TCONS_00024076|Name=TCONS_00024076|organism=Clytia hemisphaerica|type=transcript|length=3808bp|location=Sequence derived from alignment at sc0000474:10898..14705- (Clytia hemisphaerica)
AGAAAAAAATGAATTCCAGTTTTCACCGGCAACTGGTTTACGTTACAAAA
CGCGTTCTTGCTCCACCACAACTTCAATTATCATGTCGTGCTTGCTCAAC
CAATTTGGTGCAGGCGTCACTTGAAGACAAACAGATGGAACGGTTTATCC
CTATGACGCGACGTACGTTGTTACGCAAACTGACGGAAAACACGCATTTA
GTGGCGCCCGATGAAAGAGAGCAGTATATAGAATTCGTGAAAGGTTTAGA
AAGTTCCATATCTCATCAGTTCCACGGATCACTAAAAGAGCTAAAGGTGT
GTTCCCGTCATTTCCTTCAAGTGATTTCTTTCAAGTAACTTAAATACCTC
AACTCATATTCATAACTCATATTCTCAATCAGCAAAGGATGAAAATCGTA
AGGCAAACACTATTTAAACTCACTTTTCTCTTCTGTAATTGTACTAATTT
TCGTAAGATTTAATATTGTGTTTACACAATTTCGTCATTTCAAAACTTTT
AAAACCGGATAACTTTCACAATGAATTTTTCGGCGTAACATATACTTAAA
AATCTGATGCTTTTGACGGAAATTGGCGTTTTCAGGGCAATTTTCAACTG
ACTTACTCTTGATTCGAAAATTTTAATTCGCTAAAATAAAATATAAAACT
AGAATATTTCGTGATTTTTTCGGCTTGCAGAAATTAATCCGATTAAATCG
AACCTTCCATGTTCGAACGGCTAATAGAATAACAAGCTTTCTTAGCTTTT
TGAATCAGAGCCTCAGACGTATAATTTTTCTTTCTTTTCAGCAATTATAC
GACCCGTTGAACCCTGACAAGGAAACCTTAGTCGGCCTTCACATCAACAA
GAAGGAGAAACAGGAGCAAGAATTCTGGCTACTTCAAAAACTTTCATTGC
TACTTGAGAAGGCACATTTTCAAGAAATTCCGCGAAATGACGTTGCAAAG
GCGTTAGAAGACCACCCTTGCTATGAGGGCGTCATGGTCAAAGTTGACAT
GAAAAAATTTGACGTCATCAAGTTTTGGGCGTTAGGTGAAGAAGAGGTTC
CATTGCATTATGATAATTTTCGTGAACGAATCCGCAATCAAATGTATGTT
TACATGAAGCAGTGGCCCAAAAACATGTCCACGTATAAACGGGTGGTCGT
TGCTGTCCGCTCGAAAAAACAAAACAAACTTTTCTTGAAAGCTTTCAAAG
ATATTCCAACGAATGGACTAGAATACATCTTACCTGAAGGCAAGATCTCT
ATTTCCAAGTTTGATGCAGGATTGATGGCAACTGGTGTCACAATCGGAGC
GCTCAGCGTGGGCGCGCGATTACTATCGTCCGCTGCAGATATGAATTTGT
CATGGACCTCCATCGTTGGCGGAATGACCGCCCTTTTGGCGTTGCAATCA
TGGAGTGCTTACAAAAATAAACGAAACAAATATTTAGTGGAACTCGCAAA
GACATTTTATTACAAAGCATTAGCGAACAATCGTGCTTTGTTGACTTTGG
TGACTGATAGAGCTGAAGATGAAGTTTTCAAGGCTTCCTTGCTTGCGTAC
ACCTTCATCCTCAAAGAAAATATCCTCAGAGGTAATCAGTGCCCTTATAA
AGATTTTGACCGGTGCAAACTCTTTTCTTGCTCAAAAACTTCTTGGATAA
TCTAATCATACTCGTCATCTTTAGAGTATCGATTGCCTTCTATTAAAACA
ACTTTCAAGTTCAGTTTTTATTTATTCTCGCATCTCATTAGATTTGCAGT
ATTACCCTTTCCAGACGAGACATCCATAACTGAACGAGTTCTTACGAAGA
TTTAGTTACTTTTTAGTCCACTCGTCCTGAAAGACTTAAAAGTTTCTTTC
GCTGCTATTAAATTCTATGGAAAAAAGTCTCACACAATCTTTTCTTTTAG
AAACGAAAAACTCTACAGCAGCGAATACACTANAGTTACTTTTTAGTCCA
CTCGTCCTGAAAGACTTAAAAGTTTCTTTCGCTGCTATTAAATTCTATGG
AAAAAAGTCTCACACAATCTTTTCTTTTAGAAACGAAAAACTCTACAGTA
GCGAATACACTGCACATGGATCAACTCGTCTCCGTTCGAGAATTGAACGA
TTCCATTGAACATTGGATGAGCGAACGGTATGATGTCAATATTCATTTCG
ACGGAAGGAATGCTCTCCAGCAACTCGAACAACTAGGATTGCTCAAATCA
CAAAAATTAGGTCAGTACCTAGTCTGAATCGCAGATCTCCTCTAAATACC
AGGTAGTATAGGAGCTATAAGAAGCACGAATCCGTTAGTTGATACCAGTA
GCCTAGTACGTAGCATGACAAGTTCTCGGAACTATTTCAAATGATGATTA
TTTGATCTTTAGAGAATTGATGCAAAACATCTCCTCAAAGTGTATTCTGT
TTACAACAACAACAATGTCAATCGAACTACCTTAAGTGGATTAATTTTCG
CGTGGATTTATTTTCACGAATCGACCTCTTTATCGCCCGATTTCTTTCAT
TTTCCCGGTTTTTTTGGCTAATTTTGGAATTGTGTACTATTTCTAGATGC
ATAGAACATACCTACTGTAATATTTTTAGTAACTTAGTTATTTTTTTCAC
TTCCATAACAGGTGAGGAGGTCCATTTAACAGTGAAATCATTGGCCGATT
CCATTCGATCGTTACCCATGGTAACGAGCAGCCTCGATGTGGAGGAGGAC
CGTGAAGAAGAACTTGACCTTGAACAAATTGTGCCGGTTACTGATACTGA
AATTGCTGACGTGGCATCCAGAGTGAAACAAAGGGAAGCTGAATTTGCAT
CTCCGGGTTGGCAATGAAAACGTTTAACGTTTTCGGGTTGGCAATAAAAA
CGACCACGTCGCCGGGTTGATAATGAAAACGTATCACGTCTCTACAAATT
CGATTCGTCAATGTGTCCATACTATGGTTGGTGCCAAAGTGAACTAACAA
TGTTTCAGTGTGGTTTCTTATCGACGTATTCTGAGATGAATAAAATTTTG
GGAATGAAATATTGTTCCTGCCAATTTTTCACACTATAATTACACACGGA
CACTCTATTTGGAGATTTAAATATTTTTATGAATTTCACATCAACACTCG
CATTATGCACAAACAAAAGCTAGAATATTTAAACGGGATGAAATTTTGTG
GAGATTAAAATTTTGTGGAGATTAAAATTTTGTTGAGATATACGCTATTT
TCGAAGAACCTGTAAAGGCTCGACGGCTCTTATTTTTTTCGTGATTAAAT
TTAAAAGTTTAGATTTTCGTTAATGTTCATTTTTTTTTTATAGACTTACT
CAAAAAAAATTCTGGGTCAAAAAACCTTTTCACTACTGAATTTCGCTGAT
GGCACCTAAATCTGCAATATCCGCAAAATATAATCCCCGCAAAATTTATC
CCATTGAAAAATTATCAATTAAAATTTGGAATAATTTTTCCTTGAAAATA
TGTTCATTGCTATGCTATGTTCCTAATAAATTAGTTAAGTTAATTTGACC
AGACTTAGCAGATATTTATAAAACCTGCCAAATTAAATACTTGCCAAATT
CATTAAAAGTCATAACAATGGCATCTATTCAATATATCGACATTTTATGA
AAATCAGTATTTTTAGTCCACTACTAGAGAGAAATATTTGGTTAAGATCG
GTGTCTAACATTTTCTCACATAACAAATTAAATCCCTGTGAAAAGTAGCA
TATTGACCAACCCCAAAATCAATAAATCGATCTCTTTAGGTAGTTTCTTC
CGTCATGTCTTAAGATGGCTTTAATTAAAATGTGCCTATTACAAGTTTAA
CAGTTATA Coding sequence (CDS) from alignment at sc0000474:10898..14705- >TCONS_00024076 ID=TCONS_00024076|Name=TCONS_00024076|organism=Clytia hemisphaerica|type=CDS|length=5880bp|location=Sequence derived from alignment at sc0000474:10898..14705- (Clytia hemisphaerica)
GTGAGGAGGTCCATTTAACAGTGAAATCATTGGCCGATTCCATTCGATCG
TTACCCATGGTAACGAGCAGCCTCGATGTGGAGGAGGACCGTGAAGAAGA
ACTTGACCTTGAACAAATTGTGCCGGTTACTGATACTGAAATTGCTGACG
TGGCATCCAGAGTGAAACAAAGGGAAGCTGAATTTGCATCTCCGGGTTGG
CAATGAAAACGAAAAACTCTACAGTAGCGAATACACTGCACATGGATCAA
CTCGTCTCCGTTCGAGAATTGAACGATTCCATTGAACATTGGATGAGCGA
ACGGTATGATGTCAATATTCATTTCGACGGAAGGAATGCTCTCCAGCAAC
TCGAACAACTAGGATTGCTCAAATCACAAAAATTAGCAATTATACGACCC
GTTGAACCCTGACAAGGAAACCTTAGTCGGCCTTCACATCAACAAGAAGG
AGAAACAGGAGCAAGAATTCTGGCTACTTCAAAAACTTTCATTGCTACTT
GAGAAGGCACATTTTCAAGAAATTCCGCGAAATGACGTTGCAAAGGCGTT
AGAAGACCACCCTTGCTATGAGGGCGTCATGGTCAAAGTTGACATGAAAA
AATTTGACGTCATCAAGTTTTGGGCGTTAGGTGAAGAAGAGGTTCCATTG
CATTATGATAATTTTCGTGAACGAATCCGCAATCAAATGTATGTTTACAT
GAAGCAGTGGCCCAAAAACATGTCCACGTATAAACGGGTGGTCGTTGCTG
TCCGCTCGAAAAAACAAAACAAACTTTTCTTGAAAGCTTTCAAAGATATT
CCAACGAATGGACTAGAATACATCTTACCTGAAGGCAAGATCTCTATTTC
CAAGTTTGATGCAGGATTGATGGCAACTGGTGTCACAATCGGAGCGCTCA
GCGTGGGCGCGCGATTACTATCGTCCGCTGCAGATATGAATTTGTCATGG
ACCTCCATCGTTGGCGGAATGACCGCCCTTTTGGCGTTGCAATCATGGAG
TGCTTACAAAAATAAACGAAACAAATATTTAGTGGAACTCGCAAAGACAT
TTTATTACAAAGCATTAGCGAACAATCGTGCTTTGTTGACTTTGGTGACT
GATAGAGCTGAAGATGAAGTTTTCAAGGCTTCCTTGCTTGCGTACACCTT
CATCCTCAAAGAAAATATCCTCAGAGAAAAAAATGAATTCCAGTTTTCAC
CGGCAACTGGTTTACGTTACAAAACGCGTTCTTGCTCCACCACAACTTCA
ATTATCATGTCGTGCTTGCTCAACCAATTTGGTGCAGGCGTCACTTGAAG
ACAAACAGATGGAACGGTTTATCCCTATGACGCGACGTACGTTGTTACGC
AAACTGACGGAAAACACGCATTTAGTGGCGCCCGATGAAAGAGAGCAGTA
TATAGAATTCGTGAAAGGTTTAGAAAGTTCCATATCTCATCAGTTCCACG
GATCACTAAAAGAGCTAAAGGTGAGGAGGTCCATTTAACAGTGAAATCAT
TGGCCGATTCCATTCGATCGTTACCCATGGTAACGAGCAGCCTCGATGTG
GAGGAGGACCGTGAAGAAGAACTTGACCTTGAACAAATTGTGCCGGTTAC
TGATACTGAAATTGCTGACGTGGCATCCAGAGTGAAACAAAGGGAAGCTG
AATTTGCATCTCCGGGTTGGCAATGAAAACGAAAAACTCTACAGTAGCGA
ATACACTGCACATGGATCAACTCGTCTCCGTTCGAGAATTGAACGATTCC
ATTGAACATTGGATGAGCGAACGGTATGATGTCAATATTCATTTCGACGG
AAGGAATGCTCTCCAGCAACTCGAACAACTAGGATTGCTCAAATCACAAA
AATTAGCAATTATACGACCCGTTGAACCCTGACAAGGAAACCTTAGTCGG
CCTTCACATCAACAAGAAGGAGAAACAGGAGCAAGAATTCTGGCTACTTC
AAAAACTTTCATTGCTACTTGAGAAGGCACATTTTCAAGAAATTCCGCGA
AATGACGTTGCAAAGGCGTTAGAAGACCACCCTTGCTATGAGGGCGTCAT
GGTCAAAGTTGACATGAAAAAATTTGACGTCATCAAGTTTTGGGCGTTAG
GTGAAGAAGAGGTTCCATTGCATTATGATAATTTTCGTGAACGAATCCGC
AATCAAATGTATGTTTACATGAAGCAGTGGCCCAAAAACATGTCCACGTA
TAAACGGGTGGTCGTTGCTGTCCGCTCGAAAAAACAAAACAAACTTTTCT
TGAAAGCTTTCAAAGATATTCCAACGAATGGACTAGAATACATCTTACCT
GAAGGCAAGATCTCTATTTCCAAGTTTGATGCAGGATTGATGGCAACTGG
TGTCACAATCGGAGCGCTCAGCGTGGGCGCGCGATTACTATCGTCCGCTG
CAGATATGAATTTGTCATGGACCTCCATCGTTGGCGGAATGACCGCCCTT
TTGGCGTTGCAATCATGGAGTGCTTACAAAAATAAACGAAACAAATATTT
AGTGGAACTCGCAAAGACATTTTATTACAAAGCATTAGCGAACAATCGTG
CTTTGTTGACTTTGGTGACTGATAGAGCTGAAGATGAAGTTTTCAAGGCT
TCCTTGCTTGCGTACACCTTCATCCTCAAAGAAAATATCCTCAGAGAAAA
AAATGAATTCCAGTTTTCACCGGCAACTGGTTTACGTTACAAAACGCGTT
CTTGCTCCACCACAACTTCAATTATCATGTCGTGCTTGCTCAACCAATTT
GGTGCAGGCGTCACTTGAAGACAAACAGATGGAACGGTTTATCCCTATGA
CGCGACGTACGTTGTTACGCAAACTGACGGAAAACACGCATTTAGTGGCG
CCCGATGAAAGAGAGCAGTATATAGAATTCGTGAAAGGTTTAGAAAGTTC
CATATCTCATCAGTTCCACGGATCACTAAAAGAGCTAAAGGTGAGGAGGT
CCATTTAACAGTGAAATCATTGGCCGATTCCATTCGATCGTTACCCATGG
TAACGAGCAGCCTCGATGTGGAGGAGGACCGTGAAGAAGAACTTGACCTT
GAACAAATTGTGCCGGTTACTGATACTGAAATTGCTGACGTGGCATCCAG
AGTGAAACAAAGGGAAGCTGAATTTGCATCTCCGGGTTGGCAATGAAAAC
GAAAAACTCTACAGTAGCGAATACACTGCACATGGATCAACTCGTCTCCG
TTCGAGAATTGAACGATTCCATTGAACATTGGATGAGCGAACGGTATGAT
GTCAATATTCATTTCGACGGAAGGAATGCTCTCCAGCAACTCGAACAACT
AGGATTGCTCAAATCACAAAAATTAGCAATTATACGACCCGTTGAACCCT
GACAAGGAAACCTTAGTCGGCCTTCACATCAACAAGAAGGAGAAACAGGA
GCAAGAATTCTGGCTACTTCAAAAACTTTCATTGCTACTTGAGAAGGCAC
ATTTTCAAGAAATTCCGCGAAATGACGTTGCAAAGGCGTTAGAAGACCAC
CCTTGCTATGAGGGCGTCATGGTCAAAGTTGACATGAAAAAATTTGACGT
CATCAAGTTTTGGGCGTTAGGTGAAGAAGAGGTTCCATTGCATTATGATA
ATTTTCGTGAACGAATCCGCAATCAAATGTATGTTTACATGAAGCAGTGG
CCCAAAAACATGTCCACGTATAAACGGGTGGTCGTTGCTGTCCGCTCGAA
AAAACAAAACAAACTTTTCTTGAAAGCTTTCAAAGATATTCCAACGAATG
GACTAGAATACATCTTACCTGAAGGCAAGATCTCTATTTCCAAGTTTGAT
GCAGGATTGATGGCAACTGGTGTCACAATCGGAGCGCTCAGCGTGGGCGC
GCGATTACTATCGTCCGCTGCAGATATGAATTTGTCATGGACCTCCATCG
TTGGCGGAATGACCGCCCTTTTGGCGTTGCAATCATGGAGTGCTTACAAA
AATAAACGAAACAAATATTTAGTGGAACTCGCAAAGACATTTTATTACAA
AGCATTAGCGAACAATCGTGCTTTGTTGACTTTGGTGACTGATAGAGCTG
AAGATGAAGTTTTCAAGGCTTCCTTGCTTGCGTACACCTTCATCCTCAAA
GAAAATATCCTCAGAGAAAAAAATGAATTCCAGTTTTCACCGGCAACTGG
TTTACGTTACAAAACGCGTTCTTGCTCCACCACAACTTCAATTATCATGT
CGTGCTTGCTCAACCAATTTGGTGCAGGCGTCACTTGAAGACAAACAGAT
GGAACGGTTTATCCCTATGACGCGACGTACGTTGTTACGCAAACTGACGG
AAAACACGCATTTAGTGGCGCCCGATGAAAGAGAGCAGTATATAGAATTC
GTGAAAGGTTTAGAAAGTTCCATATCTCATCAGTTCCACGGATCACTAAA
AGAGCTAAAGGTGAGGAGGTCCATTTAACAGTGAAATCATTGGCCGATTC
CATTCGATCGTTACCCATGGTAACGAGCAGCCTCGATGTGGAGGAGGACC
GTGAAGAAGAACTTGACCTTGAACAAATTGTGCCGGTTACTGATACTGAA
ATTGCTGACGTGGCATCCAGAGTGAAACAAAGGGAAGCTGAATTTGCATC
TCCGGGTTGGCAATGAAAACGAAAAACTCTACAGTAGCGAATACACTGCA
CATGGATCAACTCGTCTCCGTTCGAGAATTGAACGATTCCATTGAACATT
GGATGAGCGAACGGTATGATGTCAATATTCATTTCGACGGAAGGAATGCT
CTCCAGCAACTCGAACAACTAGGATTGCTCAAATCACAAAAATTAGCAAT
TATACGACCCGTTGAACCCTGACAAGGAAACCTTAGTCGGCCTTCACATC
AACAAGAAGGAGAAACAGGAGCAAGAATTCTGGCTACTTCAAAAACTTTC
ATTGCTACTTGAGAAGGCACATTTTCAAGAAATTCCGCGAAATGACGTTG
CAAAGGCGTTAGAAGACCACCCTTGCTATGAGGGCGTCATGGTCAAAGTT
GACATGAAAAAATTTGACGTCATCAAGTTTTGGGCGTTAGGTGAAGAAGA
GGTTCCATTGCATTATGATAATTTTCGTGAACGAATCCGCAATCAAATGT
ATGTTTACATGAAGCAGTGGCCCAAAAACATGTCCACGTATAAACGGGTG
GTCGTTGCTGTCCGCTCGAAAAAACAAAACAAACTTTTCTTGAAAGCTTT
CAAAGATATTCCAACGAATGGACTAGAATACATCTTACCTGAAGGCAAGA
TCTCTATTTCCAAGTTTGATGCAGGATTGATGGCAACTGGTGTCACAATC
GGAGCGCTCAGCGTGGGCGCGCGATTACTATCGTCCGCTGCAGATATGAA
TTTGTCATGGACCTCCATCGTTGGCGGAATGACCGCCCTTTTGGCGTTGC
AATCATGGAGTGCTTACAAAAATAAACGAAACAAATATTTAGTGGAACTC
GCAAAGACATTTTATTACAAAGCATTAGCGAACAATCGTGCTTTGTTGAC
TTTGGTGACTGATAGAGCTGAAGATGAAGTTTTCAAGGCTTCCTTGCTTG
CGTACACCTTCATCCTCAAAGAAAATATCCTCAGAGAAAAAAATGAATTC
CAGTTTTCACCGGCAACTGGTTTACGTTACAAAACGCGTTCTTGCTCCAC
CACAACTTCAATTATCATGTCGTGCTTGCTCAACCAATTTGGTGCAGGCG
TCACTTGAAGACAAACAGATGGAACGGTTTATCCCTATGACGCGACGTAC
GTTGTTACGCAAACTGACGGAAAACACGCATTTAGTGGCGCCCGATGAAA
GAGAGCAGTATATAGAATTCGTGAAAGGTTTAGAAAGTTCCATATCTCAT
CAGTTCCACGGATCACTAAAAGAGCTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024076-exon-sc0000474-1575043694:14410..14705 | TCONS_00024076-exon-sc0000474-1575043694:14410..14705 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1575043694:13125..13914 | TCONS_00024076-exon-sc0000474-1575043694:13125..13914 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1575043694:12496..12675 | TCONS_00024076-exon-sc0000474-1575043694:12496..12675 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1575043694:10898..12094 | TCONS_00024076-exon-sc0000474-1575043694:10898..12094 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1510915933:14410..14705 | TCONS_00024076-exon-sc0000474-1510915933:14410..14705 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1510915933:13125..13914 | TCONS_00024076-exon-sc0000474-1510915933:13125..13914 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1510915933:12496..12675 | TCONS_00024076-exon-sc0000474-1510915933:12496..12675 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1510915933:10898..12094 | TCONS_00024076-exon-sc0000474-1510915933:10898..12094 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1491911889:14410..14705 | TCONS_00024076-exon-sc0000474-1491911889:14410..14705 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1491911889:13125..13914 | TCONS_00024076-exon-sc0000474-1491911889:13125..13914 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1491911889:12496..12675 | TCONS_00024076-exon-sc0000474-1491911889:12496..12675 | Clytia hemisphaerica | exon |
| TCONS_00024076-exon-sc0000474-1491911889:10898..12094 | TCONS_00024076-exon-sc0000474-1491911889:10898..12094 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000474 | supercontig | sc0000474:10898..14705 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR022227 | DUF3754 |
Blast
BLAST of TCONS_00024076 vs. Swiss-Prot (Human)
Match: TM143 (Transmembrane protein 143 OS=Homo sapiens GN=TMEM143 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.025e-32 Identity = 111/375 (29.60%), Postives = 191/375 (50.93%), Query Frame = 3
Query: 138 ERFIPMTRRTLLRKLTENTHLVAPDEREQYIEFVKGLESSISHQFHGSLKELKQLYDPLNPDKETLVGLHINKKEKQEQEFWXXXXXXXXXEKAHFQEIPRNDVAKALEDHPCYEGXXXXXXXXXXXXXXXWALGEE--EVPLHYDNFRERIRNQMYVYMKQWPKNMSTYKRVVVAVRSKKQNKLFLKAFKDIPTNGLEYILPEGKISISKFDAGLM-----ATGVTIGALSVGARLLSSAADMNLSWTSIVGGMTALLALQSWSAYKNKRNKYLVELAKTFYYKALANNRALLTLVTDRAEDEVFKASLLAYTFILKENILRETKNSTVANTLHMDQLVSVRELNDSIEHWMSERYDVNIHFDGRNALQQLEQL 1241
ERFIP ++ LLR L + H +P E+ F ++ +H L L+ LYDP+NPD+ETL + ++ E +L+ L LL +A+F + + +A AL H + V V V++ ++ I FWALG+ ++PL + + ++ + K P +KRVV+A R+K+ L LK+FKD P GLE +LPE K+ L+ +GV I ++VG +L+ D+ ++ + ++ + L++ + +R+ +ELA YY++ +NN LL+ + RA+DE K +LLA++F+ + T+ S + R L +E+W+ + + F+G AL L+ L
Sbjct: 72 ERFIPFSKEQLLRLLIQEFH-SSPAEKAALEAFSAHVDFCTLFHYHQILARLQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPLLAQANFSPLSEDTLAYALVVHHPQDEVQVTVNLDQYVYIHFWALGQRVGQMPL-----KSSVGSRRGFFTKLPPAERRYFKRVVLAARTKR-GHLVLKSFKDTPLEGLEQLLPELKVRTPTLQRALLNLMLVVSGVAI-FVNVGMVVLT---DLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRP--GGTQGSPEETS---------RWLRSEVENWLLAKSGCEVTFNGTRALAHLQAL 424
The following BLAST results are available for this feature:
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