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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023531 ID=TCONS_00023531|Name=TCONS_00023531|organism=Clytia hemisphaerica|type=transcript|length=965bp
caaaattgttttatgaGTATATGAGTGTATAATATAACAGGGTTGTCTAA
ATTTTACTTAGATAATGATAATTATTcctaataaaatgtaacttttagcT
AATTGGggttattaaaaaaatataaaattgcaCCATTATTATCAAATTCA
TTGTAAACGTAAACTATACAAATTCAAAGTATATTACAcattttaaataa
taaaattgtCCTAATCCTAACTAAAGCTATCTTGAAAATGATCCCATCTC
ATCCCACAGAACTAGAGTTTAATGTTCCTGAGAGGGTCgactgtattcat
gatatgcaccattgcaatgtcttctgacattacgtcacttacccaacagc
tgattggttgtaagtgacgtataaTAAGTCGNacgcgcgctgaatattta
attagtgtttacattatttgattgacagttttattataaggttacaagta
ataaccgactagtttactagtctatgaTATTCATGAATGGCTATGATTGC
ACATCAAACCTTTTTTCATGTTAAATTTTTCGTTTCATCTTAAGATCCTG
TGAACATTAACAGGAATAACTTCTTGGATCCTTATTTTAGTGAAGCTTTG
AGGATAAATTATATTTTGGTAACGAGCTTCCAAAGTATACCNactttcaa
ccaatcagctgttggggttgggtccgtggaagacattgcaatggtgcata
tcatgaatacagtcCATTACATTGACCCATTGACGACTTCGAAGTCGATT
TAAACCTCATAAGACGAAAAAGATTATGTAATAGATTTTTGATCATCCTC
TGCGAAAAAGATTCTGCAATAAACTAATTTTAATTGGGTTAATAATATAG
TCCAAAGACCAAAAAAAGCCAAAGCAAGCACATACCCctaaatttctatc
cccatggTGAAacaaaagccaaaaaatggctaaagCCAAAGTTagctttc
atttttattgttaaG Run BLAST on NCBI transcript from alignment at sc0000455:173207..174171 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023531 ID=TCONS_00023531|Name=TCONS_00023531|organism=Clytia hemisphaerica|type=transcript|length=965bp|location=Sequence derived from alignment at sc0000455:173207..174171 (Clytia hemisphaerica)
CttaacaataaaaatgaaagctAACTTTGGctttagccattttttggctt
ttgtTTCAccatggggatagaaatttagGGGTATGTGCTTGCTTTGGCTT
TTTTTGGTCTTTGGACTATATTATTAACCCAATTAAAATTAGTTTATTGC
AGAATCTTTTTCGCAGAGGATGATCAAAAATCTATTACATAATCTTTTTC
GTCTTATGAGGTTTAAATCGACTTCGAAGTCGTCAATGGGTCAATGTAAT
Ggactgtattcatgatatgcaccattgcaatgtcttccacggacccaacc
ccaacagctgattggttgaaagtNGGTATACTTTGGAAGCTCGTTACCAA
AATATAATTTATCCTCAAAGCTTCACTAAAATAAGGATCCAAGAAGTTAT
TCCTGTTAATGTTCACAGGATCTTAAGATGAAACGAAAAATTTAACATGA
AAAAAGGTTTGATGTGCAATCATAGCCATTCATGAATAtcatagactagt
aaactagtcggttattacttgtaaccttataataaaactgtcaatcaaat
aatgtaaacactaattaaatattcagcgcgcgtNCGACTTAttatacgtc
acttacaaccaatcagctgttgggtaagtgacgtaatgtcagaagacatt
gcaatggtgcatatcatgaatacagtcGACCCTCTCAGGAACATTAAACT
CTAGTTCTGTGGGATGAGATGGGATCATTTTCAAGATAGCTTTAGTTAGG
ATTAGGacaattttattatttaaaatgTGTAATATACTTTGAATTTGTAT
AGTTTACGTTTACAATGAATTTGATAATAATGGtgcaattttatattttt
ttaataaccCCAATTAgctaaaagttacattttattaggAATAATTATCA
TTATCTAAGTAAAATTTAGACAACCCTGTTATATTATACACTCATATACt
cataaaacaattttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023531-exon-sc0000455-1491911889:173207..174171 | TCONS_00023531-exon-sc0000455-1491911889:173207..174171 | Clytia hemisphaerica | exon |
| TCONS_00023531-exon-sc0000455-1510915933:173207..174171 | TCONS_00023531-exon-sc0000455-1510915933:173207..174171 | Clytia hemisphaerica | exon |
| TCONS_00023531-exon-sc0000455-1575043694:173207..174171 | TCONS_00023531-exon-sc0000455-1575043694:173207..174171 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000455 | supercontig | sc0000455:173207..174171 . |
Blast
The following BLAST results are available for this feature:
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