TCONS_00023359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023359
Unique NameTCONS_00023359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023359 ID=TCONS_00023359|Name=TCONS_00023359|organism=Clytia hemisphaerica|type=transcript|length=1687bp
GGCcaattaattctttttcatcAACCCAACAAGAACAATCCCATCATAGT
GCTGCACCTAAAGGCATGTCAATATGGTATCAGCCAAGAGCGTTTAAGAA
GAAAACAATAATGAGTGTCCTTTATCTTGGACACGATATTGTCGTTGGTA
GAGAAAGCCTTTCCGAATGTGATGACAATAAGATGGTAAAACTTTCTgga
ctgaaaatcaaacaagcAAAAGAAATACTAAAAACTATGAGGAAAAAATA
TAATAAGGAAAGTGACCACACATTGTTTCAAGCCTTTTATGAAAAGACAA
AATTGCTCTTTGATGCAGCCCATCCGGAAGAAGATTCGTCGTTTTCAGAT
TTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAA
AAGTACAACATCTCACgaatcaacaaaatcaaacaaagagCTTTCGTCTC
CTATCCAAAAAGATCAAACAATGTCAGAAAAAGAAGATATGTTTCCTTTT
AAGAAGAAATCATCTCCAAATGAAATTGCGTTTCCTTTTCCACTTGAGCA
ATCTTTATTAAGTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTC
GGCAGATTAATTCTTTTTCATCGACCCAACAAGAAGAATCCCATCATAGT
GCTGCACCTAAAGAAAAGACAAAATTGCTTTTTGATGCAGCCCTTTCGGA
AGAAGATTCGTCGTTTTCAGATTTGCAAACTGTCTCACCTCTTCAAAAGA
AACCAGCCTCCATCAATACAAAAAGTACAACATCTCacaaatcaacaaaa
tcaaacaaagagCTTTCGTCTCCTATCCAAAAAGATCAAACAATGTCAGA
AGAAGAAGATATGTTACCTTTTAAGAAGAAATcggtttcaaatgaaaata
AAAAGACAAAACTGCTCTTTGATGCAGCCCTTCCGGAAGAAGATTCGTCG
TTTTCAGATTTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCAT
CAATACAAAAAGTACAACATCTCACAAATCAACAAAATCAAACAAAGAGC
TTTCGTCTCCTATCCAAAAAGATCAAACAATGTCAGAAGAAGAAGATATG
TTACCTTTTAAGAAGAAATCGGTTTCAAATGAAAATAAAAAGACAAAATT
GCTCTTTGATGCAGCCTTTCCGGAAGAAGTTTCGTCGTTTTCAGATTTGC
AAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGT
ACAACATCTAACgaatcaacaaaatcaaacaaaaaactttcgtcTCCTAT
CCAAAAAGATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGA
AGAAATCATCTCCAAATGAAAATAATGATAAGGATTATCAAGACATGACC
AATTTTCTAATACAAATGGGTTTGGAAGAGGTCGAGAAACATTTACCTAG
TGGAAACGatacATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAAC
ACAAGTTTGCGCTTGCACAACAATTTTGCAGGAGCAAAAACGATCCTGAT
TATTTGATGAAATCATGGATCGATGAATATATAGGTAACTTTGGAGAAGA
GAATTGCAGCCTTAAATTATAGTTATGAAGTAGCTCCTCCTCAAGATTCA
ATTGATTGTGGCATTCAAGATTTGTGCATTATATTGC
Run BLAST on NCBI

transcript from alignment at sc0000452:106917..122075+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023359 ID=TCONS_00023359|Name=TCONS_00023359|organism=Clytia hemisphaerica|type=transcript|length=15159bp|location=Sequence derived from alignment at sc0000452:106917..122075+ (Clytia hemisphaerica)
GGCcaattaattctttttcatcAACCCAACAAGAACAATCCCATCATAGT
GCTGCACCTAAAGGTAGTTAttactaaatttttgaaaagcgaTAAATAGT
ATCATGACAATTGTGCAACACTTTTCAGTCATTGTGAAATGCCTTAAGGG
AAAATATGGCGGATTTGGtgcattttgtttcttttctctaATGGTTTGTC
ACTAATTGACGTTTTACAGAATTTATCATGTTTCCTGTTGTActagaaaa
atcattttcaataaCACATCCTGATTCTCCTTcagaaataaaatcaactt
cGCCAATCAATTCTTTCTCGTCGATCCAACAGGAAAAATCATGTCAAAGT
TCTTCACCTAAaggaataaatttttaaaaagcgaTAGGAACATGACATCA
GCAGTGTTATTTAACCCTTTTTAAGGCCGCTCTACACACAAGAATAATAA
GATGAATTCGACTAGAATTTTCTGTTTGAACTGTTATTCTTGTGCAAACT
GCACGcaggaattgaaaaaaaatgtaaattagataatacttgaaaaattt
tctaatatCCCTTTTAATGTTGAATTCTTCTTCAAACTACCCATAAGAAT
AAAAACCACGTGTCCTTTTAAATGTCCGAACTGAAATCAATCATGTACTC
CACTTCAATGTCTTGTTCTAAGATTGAAGTTTCATTCTTGtgaaaatcta
tatattaatacgcttaaacgtgtgtgtttacaaggttttgtaaaaagttt
tcgaaaatctaacaaagctctacaaagcctcctcttcatggcgttgaacc
atcatctttttgcactttaagcagatttcctaccactagactaaatTTGA
GACACCAAtatgctattttctattcaccaagtttggagcttgatcagtta
aaatcaaccttctttccaaatttcttttgtcaatttaaagaattcttatt
cagatattctttaaaactttctgtttacaatagcggctccctatcacttt
caaaactttttaaaacatttttatataatCTTTTGTCCCGGTTTCAACTT
TggtttttttgaagaatgtgcaTTCTTCTGAACCAGTAAGCCAACTGTGG
CTTGCATAAAATTAGTTACTTCATTCAAGGATATAGTAAGAGtgtctttc
aaactttcactttgaaattgtctttctaatctatatattaatacgcttaa
acgtgtgtgtttacaacgttttgtaaaaagttttcgaaaatctaacaaag
ctctacaaagcctcctcttcatggcgtTGAACCATCATCTTTTTTCTCCT
TAAGCAGATTTCccaccactagactaactttgagaccccaagatactatt
ttctattcaccaacTTTGGAGCTTGatggtttttttctgtttacaatagc
ggctcccttatcactttcaaaacttttcaaagtctttcaaagtcaccctc
gaatgtccaactacgatggctagccacgatggctaagacgatctaaaata
tacttttgctaagtcatttatttaattgtggtttaaaattgcaatgcaat
gttaattttttttctcttttatttcctaaaatcaaaatcaaatcatcgaT
CCTTTCCGTTAGAATTTTGTAGTGATTCACTGGATTGGTtcacgcagcgt
gcgacgctgcgcatacggctagtggTAATTATAGCACTATTAAACAAGAA
ggtcatttcattttcattttttgaagtttttcaaataactttttatttaa
aattattccgctcaacaatatctttccaacggtaccaaATTTGTTAAGAT
TGAAACATTCCTTAAATGGTTACAGCCGAAACAAAAAAGATAAGAATACA
TTGATTTGATAATTTCTTGTTTTGTTTCTGTTTCTAGGCATGTCAATATG
GTATCAGCCAAGAGCGTTTAAGAAGAAAACAATAATGAGTGTCCTTTATC
TTGGACACGATATTGTCGTTGGTAGAGAAAGCCTTTCCGAATGTGATGAC
AATAAGATGGTAAAACTTTCTggactgaaaatcaaacaagcAAAAGAAAT
ACTAAAAACTATGAGGAAAAAATATAATAAGGAAAGTGACCACACATTGT
TTCAAGCCTTTTATGAAAAGGCAAAATTGCTCTTTGATGCAGCCCTTCCG
GAAGAAGATCCGTCGTTTTCATATTTGCAAACTGTCTCACCTCTTCAAAA
GAAACCAGCCTCCATCAATACACAAAGTACAACATCTCACgaatcaacaa
aatcaaacaaagagCTTTCGTCTCCTATCCAAAAAGATCAAACAATGTCA
GAAGAAGAAGATATGTTACCTTTGAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAATTACATCTGCTGCATCTCCTTTAGA
AAGCAAAGCAACTCGGCcaattaattctttttcatcGACCCAACAAGAAC
AATCCCATCATAAGTGCTGCACCTAAAGGTAGTTAttactaaatttttga
aaagtgatagATAGTATCATGACATTTGTGCAACACTTTTCAGTCATTGT
GAAATGCCTTAAGGGAAAATATGGCGGATTTAGtgcattttgtttctttt
ctctaATGGTTTGTCACTAATTGACCTTTTACAGAATTTATAATGTTTCC
TGTTGTActagaaaaatcattttcaattacAGATCCTGATTCtccttcag
aaaaaaaatcaacttcgcCAATCAATTCTTTCTCGTCGATCCAACAGTAA
AAATCATGTCAAAGTTCTTCACCTAAaggaataaatttttaaaaagtgat
aggAACATGACATCAGTAGTGTTATTTAACTCTTTTTAAGGCCGCTCTAC
ACAcgagaataataaaatgaattggactaaaattttctgtttgaacTGTT
ATTCTTGTGCAAACTAcacgcagaaatttaaaaaaaaatgtaaattagat
aatacttgaagaattttcTAATATCCCTTTTAATGttgaattctttttca
aactacCCATAAGAATAAAAACTACGTGTCTTTTTAAATGTCCGAACTGA
AATCAATCATATACTCCACTACAATGTCTTGTTCTAAGATTGAAGTTTCA
TtcttgtgaaaatggtaattatagcaCTATTANTTTTCAGTCATCGTGAT
ATGCCTTAAGGGAAAATATGGTGGATTTGGtgcattttgtttcttttctc
taATGGTTTGTCACTAATTGACGTTTTACAGAATTTATCATGTTTCCTGT
TGTActagaaaaatcattttcaattacACATCCTGATTCtccttcagaaa
aaaaatcaacttcgcTTATCAAATCTTTCTTGTCGATCCAACAGGAAAAA
TCATGTCAAAATTCTTCACCTAAaggaataaatttttaaaaagcgaTAGG
AACATGACATCAGTAGTGTTATTTAACCCTTTTTAAGGCCGCTCTACACA
CGAGAATAATAAGATGAATTCGACTAGAATTTTCTGTTTGAACTGTTATT
CTTGTGCAAACTGCACGcaggaattgaaaaaaattgtaaattagataata
cttgaagaattttcTAATATCCCTTTTAATGTTGAATTCTTCTTCAAACT
ACCCATAAGAATAAAAACCACGTGTCCTTTTAAATGTCCGAACTGAAATC
AATCATATACTCCACTACAATGTCTTGTTCTAAGATTGAAGTTTCATtct
tgtgaaaatggtaattatagcaCCATTAAACAAGAAGTtcatttcatctt
cattttttgaagtttttcaaataactttttatttaaaattatctcactca
acaatatctttccaacggtaccaaATTTATTAAGATTCAAACATCTCTCT
TTCTACTAGAAAAGACAAAATTGCTCTTTGATGTAGCCCTTCCGGAAGAA
GATTCGTCGTTTTCAGATTTGCAAACTGTCTCACCTCTTCAAAAGAAACC
AGCCTCCATCAATACAAAAAGTACAACATCTCACgaatcaacaaaatcaa
acaaagtgCTTTCGTCTCCTATCCAAAAAGATCAAACAATGTCAAAAGAA
GAAGATATGTTACCTTTTAAGAAGAATTCATCTCCAAATGAAAGTACGTT
TCCTTTTCCACTTGAGCAATCTTTATTAATTACATCTGCTGCATCTCCTT
TAGAAAGCAAAGCAACTCGGCCAATTAATTCTTTTTCGTCGACCCAACAA
GAACAATCCCATCATAGTGCTGCACCTAAAGGTAGTTAttactaaatttt
tgaaaagcgaTAGATAGTATCATGACAATTGTGCAACAGTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCGATCCAACAGGAAAAATCATGTCAAAGTTCTTCACCTAAaggaataaa
tttttaaaaagcgaTAGGAACATGACATCAGTAGTGTTATTTAACCCTTT
TTAAGGCCGCTCTACACACAAGAATAATAAGATGAATTCGACTAGAATTT
TATGTTTGAACTGTTATTCTTGTGCAAACTGCACGcaggaattgaaaaaa
aatgtaaattagataatacttgaagaattttcTAATATCCCTTTTAATGT
TGAATTCTTCTTCAAACCACCCATAAGAATAAAAACCACGTGTCCTTTTA
AATGTTAGAACTGAAATCAATCATATACTCCACTACAATGTCTTGTTCTA
AGATTGAAGTTTCATtcttgtgaaaatggtaattatagcaCTATTAAACA
AGAAGTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAAGAAGTtcatttcatcttcattttttgaagtttt
tcaaataactttttatttaaaattattccactcaacaatatctttccaac
ggtaccaaATTTATTAAGATTCAAACATCTCTCTTTCTACTAGAAAAGAC
AAAATTGCTCTTTGATGCAGCCCATCCGGAAGAAGATTCGTCGTTTTCAG
ATTTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACA
AAAAGTACAACATCTCACgaatcaacaaaatcaaacaaagagCTTTCGTC
TCCTATCCAAAAAGATCAAACAATGTCAGAAAAAGAAGATATGTTTCCTT
TTAAGAAGAAATCATCTCCAAATGAAATTGCGTTTCCTTTTCCACTTGAG
CAATCTTTATTAAGTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAAC
TCGGCAGATTAATTCTTTTTCATCGACCCAACAAGAAGAATCCCATCATA
GTGCTGCACCTAAAGGTAGCTAttactaaatttttgaaaagcgaTAGATA
GTATCATGACAATTGTGCAACACTTTTCATTCATTGTGAAATGCCTTAAG
GGAAAATATGGCGGATTTGGtgcattttctttcttttctctaATGGTTTG
TCACTAATTGACGTTTTACAGAATTTATCATGTTTCCTGTTGTActagaa
aaatcattttcaattacACATCCTGATTCtccttcagaaaaaaaatcaac
ttcgcCAATCAATTCTTTCCCATCGATCCAACAGGAAAAATCATGTCAAA
GTTCTTCACCTAAaggaataaatttttaaaaagtgataggAACATGACAT
CGGTAGTGTTATTTAACCCTTTTTAAGGCCGCTCTACACACGAGAATAAT
AAGATGAATCCGACTAGAATTTTCTGTTTGAACTGTTATTTTTGTGCAAA
CTACACGcaggaattgaaaaaaaaatgtaaattagaTTATACTTGAAGAA
TTTTCTAATATCCCTTTTAATGTTGAATTCTTCTTCAAACTACCCATAAG
AATAAAAACCACGTGTCCTTTTAAATGTCCGAACTGAAATCAATCATATA
CTCCACTACAATGTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaat
ggtaattatagcaCTATTATACAAGAAGTtcatttcatcttcattttttg
aagtttttcaaataactttttatttaaaattattcaactcaacaatatct
ttccaaaagtaccaaatttattaaaattgaaACATCTCTCTTTCTACTAG
AAAAGACAAAATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGATTCGTCG
TTTTCAGATTTACAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCAT
CAATACCAAAAGTACAACATCTCACGAATCAACAAACTCAAACAAAGAGC
TTTCGTCTCCTATCAAAAATGATCAAACAATGTCAGAAGAAGAAGATATG
TTACTTTTTAAGAAGAAATCATATCCAAATGAAAGTACGTTTCTTTTTCC
ACTTGAGCAATCTTTATTAATTACATCTGCTGCATCTCCTTTAGAAAGCA
AAGCAACTCGGCcaattaattctttttcatcGAGCCAACAAGAACAATCC
CATCATAGTGCTGCACCTAAAGGTAGTTAttactaaatttttgaaaagcg
aTAGATAGTATCATGACAATTGTGCAACAGTTTTCAGTCATTGTGAAATG
CCTTAAGGGAAAATATGGCGGATTTGGtgcattttctttcttttctctaA
TGGTTTGTTACTTATTGACGTTTTACAGATTTTATCATGTTTCCTGTTGT
ActagaaaaatcattttcaattacACATCCTGATTCtccttcagaaaaaa
aatcaacttcgcCAATCAATTCTTTCTCGTCGANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttgaagtttttcaa
ataactttttatttaaaattattccactcaacaatatctttccaacggta
ccaaATTTATTAAGATTGAAACATCTCTCTTTCTACTAGAAAAGACAAAA
TTGCTTTTTGATGCAGCCCTTTCGGAAGAAGATTCGTCGTTTTCAGATTT
GCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAA
GTACAACATCTCacaaatcaacaaaatcaaacaaagagCTTTCGTCTCCT
ATCCAAAAAGATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAA
GAAGAAATcggtttcaaatgaaaatagtaCGTTTCCTTTTCCACTTGAGC
CATCTTTATTAATTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACT
CGGCGaattaattctttttcatcGACCCAACAACAGCAATCCCATCATAG
TGCTGCACCTAAAGGTAGTTAttactaaatttttgaaaagcgaTAGATAG
TATCATGACAATTGTGCAACACTTATAAGTCATTGTGAAATGCCTGAAGG
AAAAATATGGCGGATTTGGtgcattttgtttcttttcccTAATGGTTTGT
CACTAATTGACGTTTTACAGAATTTATCATGTTTCCTGTTGTActagaaa
aatcattttcaatatttacaCATCCTGATTCtccttcagaaaaaaaatca
acttcgcCAATCAATTCTTTCTCATCGATTCAACAGGAAAAATCATGTCA
AAGTTCTTCTCCTAAaggaataaatttttaaaaagcgaTAGGAACATGAC
ATCGGTAGTGTTATTTAACCTTTTTTAAGGCCGCTCTACACACGAGAATA
ATAAGATGAATTTGAATAGAATTTTCTGTTTGAACTGTTATTCTTGTGCA
AACTGCACGCAGGAATTGAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTTTTAAA
TGTCCGAACTGAAATCAATCATATACTCCACTACAATGTCTTGTTCTAAG
ATTGAAGTTTCATTCTTGTGAAAATGGTAATTATAGCACTATTATACAAG
AAGTTTActtcatcttctttttttgaagtttttcaaataactttttattt
aaaattattccactcaacaatatctttccaacggtaccaaATTTATTAAG
ATTGAAACATCTCTCTTTCTACTAGAAAAGACAAAATTGCTTTTTGATGC
AGCCCTTTCGGAAGAAGATTCGTCGTTTTCAGATTTGCAAACTGTCTCAC
CTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTACAACATCTCac
aaatcaacaaaatcaaacaaagagCTTTCGTCTCCTATCCAAAAAGATCA
AACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATcggttt
caaatgaaaatagtaCGTTTCCTTTTCCACTTGAGCCATCTTTATTAATT
ACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTCGGCGaattaattc
tttttcatcGACCCAACAACAGCAATCCCATCATAGTGCTGCACCTAAAG
GTAGTTAttactaaatttttgaaaagcgaTAGATAGTATCATGACAATTG
TGCAACACTTATAAGTCATTGTGAAATGCCTGAAGGAAAAATATGGCGGA
TTTGGtgcattttgtttcttttcccTAATGGTTTGTCACTAATTGACGTT
TTACAGAATTTATTATGTTTCCTGTTGTActagaaaaatcattttcaata
tttacaCATCCTGATTCtccttcagaaaaaaaaatcaacttcgcCAATCA
ATTCTTTTTCATCGATTCAACAGGAATAATCATGTCAAAGTTCTTCTCCT
AAaggaataaatttttaaaaagcgaTAGGAACATGACATCGGTAGTGTTA
CTTAACCCTTTTTAAGGCCGCTCTACACACGAGAATAATAAGATGAATTC
GACTAGAATTTTCTGTTTGAACTGTTATTCTTGTGCAAACTACACAcagg
aattgaaaaaaaatgtaaattagaCAATACTTGGAGAATTTTCTAATATC
CCTTTTAATGTTGAATTCTTCTTCAAAATACCCATAAGAATAAAAACCAC
GTGTCCTTTTAAATGTCCGAACTGAACTCAATCATATACTCCACTACAAT
GTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaatggtaattatagc
aCTATTAAACAAGAAGTTCNTTGAAATGCCTTAAGGGAAAATATGGCGGA
TTTGGtgcattttctttcttttctctaATGGTTTGTCACTTATTGACGTT
TTACAGAATTTATCATGTTTCCTGTTGTActagaaaaatcattttcaatt
acACATCCTGATTCtccttcagaaaaaaaatcaNcaaataactttttatt
taaaattattccactcaacaatatctttccaacggtaccaCATTTATTAA
GATTCAAACATCTCTCTTTCTACTAGAAAAGACAAAACTGCTCTTTGATG
CAGCCCTTCCGGAAGAAGATTCGTCGTTTTCAGATTTGCAAACTGTCTCA
CCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTACAACATCTCA
CAAATCAACAAAATCAAACAAAGAGCTTTCGTCTCCTATCCAAAAAGATC
AAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATCGGTT
TCAAATGAAAATAGTACGTTTCCTTTTCCACTTGAGCCATCTTTATTAAT
TACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTCGGCGAATTAATT
CTTTTTCATCGACCCAACAACAGCAATCCCATCATAGTGCTGCACCTAAA
GGTAGTTATTACTAAATTTTTGAAAAGCGATAGATAGTATCATGACAATT
GTGCAACACTTATAAGTCATTGTGAAATGCCTGAAGGAAAAATATGGCGG
ATTTGGTGCATTTTGTTTCTTTTCCCTAATGGTTTGTCACTAATTGACGT
TTTACAGAATTTATCATGTTTCCTGTTGTACTAGAAAAATCATTTTCAAT
ATTTACACATCCTGATTCTCCTTCAGAAAAAAAATCAACTTCGCCAATCA
ATTCTTTCTCATCGATTCAACAGGAAAAATCATGTCAAAGTTCTTCTCCT
AAAGGAATAAATTTTTAAAAAGCGATAGGAACATGACATCGGTAGTGTTA
TTTAACCTTTTTTAAGGCCGCTCTACACACGAGAATAATAAGATGAATTT
GAATAGAATTTTCTGTTTGAACTGTTATTTTTGTGCAAACTGCACGcagg
aattgaaaaaaaatgtaaattagataatacttgaagaattttcTAATATC
CCTTTTAATGTTAAATTCTTCTTCAAACTACCCATAAGAATAAAAACCAC
GTGTCCTTTTAAATGTCCGAACTGAAATCAATCATATACTCCACTACAAT
GTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaatggtaattatagc
aCTATTATACAAGAAGTTcatttcatcttctttttttgaagtttttcaaa
taacattttatttaaaattattccactcaacaatatctttccaacggtac
caaATTTATTAAGATTGAAACATCTCTCTTTCTACTAGAAAAGACAAAAT
TGCTCTTTGATGCAGCCTTTCCGGAAGAAGTTTCGTCGTTTTCAGATTTG
CAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAG
TACAACATCTAACgaatcaacaaaatcaaacaaaaaactttcgtcTCCTA
TCCAAAAAGATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAG
AAGAAATCATCTCCAAATGAAAGTACGTTTCCTTTTCCACTTGAGCAATC
TTTATTAATTACCTCTACTGCATCTCCTTTATTAAGCAAAGCAACTCGGC
caattaattctttttcatcGAGCTAACAAGAACAATCACATTATAGTGCT
GCACCTAAAGGTAGTTAttactaaatttttgaaaagcgaTAGATAGCATC
ATGACAATTGTGCAACACTTTTCAGTCATTGTGAAATGTCTTAAGGGAAA
ATATGGCGGATTTGGTGCATTTTGTTTCAggtttgtttcttttgttttca
tgatCAATGTAGATAATGATAAGGATTATCAAGACATGACCAATTTTCTA
ATACAAATGGGTTTGGAAGAGGTCGAGAAACATTTACCTAGTGGAAACGG
TAacgatttctttcatttttgctGGCAATATTTCCTTAATAACATCATAT
AGATTATTGATAATCGTTAATAGTCAGGGTGAATAAGTTTTTAAGAAGAT
TAttaatgagaaaagacaatcaTGATAAATCATAAATATTTGTTTAAATA
TGCTAGTTTGAATCGTATAAGGAGCTTCTTTGTAATACTCACATTTTAAC
ACATTTAATCCGAATTTAATAGAGTCACACTATTCTATGTCAAGTTTTGG
ATCTTGCATGTGAATATTTTATCGAGGTGATTGAAGTAtcagtttttaat
ttttagatacATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAACAC
AAGGTAAAAAAAGTTTCTGAACTGTCATGATATGCACTAGAATTTGTTTT
CCACACTTTACATAACACCACAACCATGTACTTTttagaaaagtattgat
atactCAAAGTTTCTAGTTTGGATGGTTCTGATGTTTTTCATGAAACTTT
TAATTATAAACGCAAATATTGGTTAATATCGCAATATTGGATTAGCATCA
AACCtggaattttaaactttttgttaggGTGTGTTTAAATGGCcaggaaa
tctttttttgattcgTTCCTTTTTTAGTTTGCGCTTGCACAACAATTTTG
CAGGAGCAAAAACGATCCTGATTATTTGATGAAATCATGGATCGATGAAT
ATATAGGTAACTTTGGAGAAGAGAATTGCAGCCTTAAATTATAGTTATGA
AGTAGCTCCTCCTCAAGATTCAATTGATTGTGGCATTCAAGATTTGTGCA
TTATATTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013129XLOC_013129Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023359-exon-sc0000452-1491911889:106917..106979TCONS_00023359-exon-sc0000452-1491911889:106917..106979Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:106917..106979TCONS_00023359-exon-sc0000452-1510915933:106917..106979Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:106917..106979TCONS_00023359-exon-sc0000452-1575043694:106917..106979Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:108804..109036TCONS_00023359-exon-sc0000452-1491911889:108804..109036Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:108804..109036TCONS_00023359-exon-sc0000452-1510915933:108804..109036Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:108804..109036TCONS_00023359-exon-sc0000452-1575043694:108804..109036Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:112181..112198TCONS_00023359-exon-sc0000452-1491911889:112181..112198Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:112181..112198TCONS_00023359-exon-sc0000452-1510915933:112181..112198Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:112181..112198TCONS_00023359-exon-sc0000452-1575043694:112181..112198Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:113983..114331TCONS_00023359-exon-sc0000452-1491911889:113983..114331Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:113983..114331TCONS_00023359-exon-sc0000452-1510915933:113983..114331Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:113983..114331TCONS_00023359-exon-sc0000452-1575043694:113983..114331Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:118192..118428TCONS_00023359-exon-sc0000452-1491911889:118192..118428Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:118192..118428TCONS_00023359-exon-sc0000452-1510915933:118192..118428Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:118192..118428TCONS_00023359-exon-sc0000452-1575043694:118192..118428Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:119493..119729TCONS_00023359-exon-sc0000452-1491911889:119493..119729Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:119493..119729TCONS_00023359-exon-sc0000452-1510915933:119493..119729Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:119493..119729TCONS_00023359-exon-sc0000452-1575043694:119493..119729Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:120655..120888TCONS_00023359-exon-sc0000452-1491911889:120655..120888Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:120655..120888TCONS_00023359-exon-sc0000452-1510915933:120655..120888Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:120655..120888TCONS_00023359-exon-sc0000452-1575043694:120655..120888Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:121179..121265TCONS_00023359-exon-sc0000452-1491911889:121179..121265Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:121179..121265TCONS_00023359-exon-sc0000452-1510915933:121179..121265Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:121179..121265TCONS_00023359-exon-sc0000452-1575043694:121179..121265Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:121573..121619TCONS_00023359-exon-sc0000452-1491911889:121573..121619Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:121573..121619TCONS_00023359-exon-sc0000452-1510915933:121573..121619Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:121573..121619TCONS_00023359-exon-sc0000452-1575043694:121573..121619Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1491911889:121894..122075TCONS_00023359-exon-sc0000452-1491911889:121894..122075Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1510915933:121894..122075TCONS_00023359-exon-sc0000452-1510915933:121894..122075Clytia hemisphaericaexon
TCONS_00023359-exon-sc0000452-1575043694:121894..122075TCONS_00023359-exon-sc0000452-1575043694:121894..122075Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000452supercontigsc0000452:106917..122075 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.446351	0	0.609711	0	0	0	0	0	0.053867	0	0	0.0809354	0	0	0	0	0	0	0.359329	0	0	0	0.328046	5.20846e-08	0.0792742	0.0664269
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top