TCONS_00023022 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023022
Unique NameTCONS_00023022
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2081

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023022 ID=TCONS_00023022|Name=TCONS_00023022|organism=Clytia hemisphaerica|type=transcript|length=2081bp
ATAAAGAGGACTAAATTTTAAGGAAGTGTATTATGTAAACTAAGCGATTC
GTTAGTTAAGAAGTACAAGCTCGTCTAAAAGGTAAGATAATCCAATATGG
CGGACACTGGAAaggaaaatcagaaatttgatgACCAAACGATCAAGCTT
TATGTTGGAGGCATAGATACATCATGGGACACAGAAAAGATTCAGAAAAT
TTTAGGAAACGATGGTATAAAAAGAGTCGATGTTGTCAAAAACTATGCCT
TTGCAtttGTCGTGAACAAAGAAAAAGCTGACAACATTATAACACAATAC
AGTGGCACCAATATTGATGGGTGTAGGATTAATATACAGatttcaaagaA
CAAACAGAATCTACCAGATAGTGAAAACCTTTGCTTTGAGTGTGGAAAAC
CCGGTCACTGGGCTAAAGAATGCCAACTAAGAATtGATCGTTATGCACGC
CTTGATAGACCTCCACCCAGAGGTGGCTTTCGTGGTAGAGGCCGTGGGCG
TGGGGATTATGGTGGCCGTGGTGGTTATGGTGGCCGAGGGGGTTATGGTG
GCCGAGGTGGTTATGGTGGCCGAGGAGACTATGGTGGCCGAGGTGACTAT
GGTGGCCGAGGAGACTATGGTGGCCGAGGTGGAGGAAGAGGAAGAGGTGA
CTACGGCCGTGACACCTACCAGAGGGATCCTTACGCCAGAGACCCGTATC
TTCCGAGGGACCCTTATGCAAGAGATCCATACCCGAGAGACCAACACAGA
GATTCTTATGGAAGGGACCCTTACTCAAAAAGTGGATACAGGGAACGCAG
CCCGCCAAGAACATATGATTATTCAAGAGCACCTGCATCTGACCCATATG
CTGCTGAAAGAAGACGTTTAGCTTACGGGGACTCCACCCCTTCTAGTAGC
TCCGCTCCGTATGCTACTCAAAGTAAACGGGCTGATCCTTATGCTAGTGG
TCAAAGCCAACGAAGTGACCCCTATGCCAGCCAGCGAAGTGACCCCTCTG
CTAGCCAGAGAGGTGATCCCTATGCTAGCCAAAGAAGTGATCCCTATGCT
AGCCAAAGAAGTGACCCCTATTCAAAGGAACGATCTGCTCCCTACGCCAG
CCAAACGACTGACCCTTATGCTACAAGCAGACCAGTACAAAGTCAGCAAG
TTGCTTCTGCGCCGTACGCCACACAAAGTCAAGCATCGACTGCAACTTAC
GCTACGCAAAGTTACGCTGCCACTCCATCTTATGCTACACCTGCACGTAC
CGCATCCTATTCCTCTTATCCAGCTCAGACCCAATCAAGCTCCGCATATG
CAACTCAAAGTTATGCAAGCTCCTCATATGCCACTCAAAGTTATGCAAGC
TCTTCATATGCAACTCAAAGTTATGCAAGCTCTTATCCTGCTCAAAGTCA
ATCGAGTGCCGCGCCTTACGCCACTCAAAGCCAAAACGGTGGAGCTCGTT
ATGCAACTCAAAGTTATGCTCAATATGCAGCAGACTCACCGACAAAGAGT
TTGCCTTATCAGCAATCCACTAGTGTTTCTTCTGCTTCCTATGGCACCTC
AGCTTCAGCATACAGTGCACAACCTGCGGCTGCTACTCCTGGCTCTGCAT
CAGCTGGCTACAGTTACAGTTACCGCTAGATACCAGGTCGAATGCGTGAT
TCAAATCCAAGCTCTTACGAAGGAAAATCGAGTCGTGTCGAGTCGTGTCG
TATGTCGTATGTCGGGTATTATCGGAAATTTATCGCGGAATATCAAGGCT
TTACTTACGTTCGACgggaaaaagacaaaaaataacaacagATAGTACAA
ATAAATTAAGGACGACggactttcttttttatttcgaacTCGACGTATCG
TTTTATCGCTTTTTTTACTCGCGTATCACTTTTCGTGGTGCATATATGTG
ATTTATTACTGAAATACTTTTTACCTCTTATATGAAAATCATGTTCTAAT
TGTTATGTGTCTACGTagatgtcccaaaaaaagcggaaatatttttataa
aaagtcgAAACTCATTATCTAAAATGAGCtaaataattgaaataagagTA
CAATTCTttgttcaatcaatagatattcaat
Run BLAST on NCBI

transcript from alignment at sc0000439:116936..136568+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023022 ID=TCONS_00023022|Name=TCONS_00023022|organism=Clytia hemisphaerica|type=transcript|length=19633bp|location=Sequence derived from alignment at sc0000439:116936..136568+ (Clytia hemisphaerica)
ATAAAGAGGACTAAATTTTAAGGAAGTGTATTATGTAAACTAAGCGATTC
GTTAGTTAAGAAGTACAAGCTCGTCTAAAAGGTAAGATAATCCAATATGG
CGGACACTGGAAaggaaaatcagaaatttgatgACCAAACGATCAAGCTT
TATGTTGGAGGCATAGATACATCATGGGACACAGAAAAGATTCAGAAAAT
TTTAGGAAACGATGGTATAAAAAGAGTCGATGTTGTCAAAAACTATGCCT
TTGCAGTAAGTTTCAATATTATGATGCGATGAAAAAACGGGTTTGCTTAT
TATTTTATTTGACGCtcatgaaaatcttcaattttaggtccaactttaac
aagcaattgttctttgtgtagttgagctataaaattaattatttttgagt
aatctgtagctttcttttagctttccaaccatacataatatgcaggtgta
atattctacacttttgtctaaaaattcgtTCCAACAAGGCCATTTTTAGA
AAAATTAGATCTGCGGGACACAAAAAATTTCACAactcatctttgatttc
aaagcgctgcggaggaaaaaatgttcagacagtgaaactttccatattta
tcagaaaatacctgagaaatccaatggtgctactatgctctgaaattaat
tctttcattaaagttattaatttgtactttttcatactttggcaaacatt
ttcagcctgaaaacaAGGAatagaattatagagagtggtaccactgaaaa
atttgacccttttttagcctaaaacagttatttatatgccatggggaatt
tttcctccgcagcgctttgaTTACACAAAGATAGGTAAgttcagcaattt
taacttccGCTTAATAACGtttaattggtcagcctaagctgagcattcaa
ataggtaaaattcagttcttccatcatcataagacgacaaaaaaaaaaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTT
TTTAGATGTACTTCTTGGagttattattttgaattataaCTTTTCTCGGT
CCTCTGCAATTCTTTTTGGCATTGTTAGTTATATTGCATTTTACATGTGC
TGGTTTTCACgaggtttttcattttttatgaagtATCATACATGATTTGT
GATGGATGTTGTTCTGTTGACTGCCAACAAAGTGTTAATTGCTCTGTAAA
ACAGCGGTCGCACCAGTTTGCTCTGAAGCAAACTGTGACCtagtacataa
ttttaaataagttatcaaatgtttcacattttgtacattattcaacatat
ttagtctactctgtttcagtgcatatcttacatctgttaacccacttatc
gACCGCCGAAGGCGGTTAATCGACCGCCTGAAGGCGGTTTTTTACCGTCG
TGTTTTTGTTTACGGAGTTGGGAGGTTGAaagttgaaatcgaaagtgaaa
tcaTGCAGCTTAagttaccatctttaattttcatttttggtggCTGAATA
TTAGGGAGATAACCACGCAAATATTTAAGAGATATCCCGCGTGTACGGTG
GCCCAGAGAGGTATCGGTGGATGGTACGGTGGCTTAGAAAGTTCAGCGTG
TTAGCTAGGATGCAAGCGTTTTGATTTCAGAGGTAGTCTTTGTTTTTAGA
TGTACTTCTTGAagtaattattttgaattttaacttttctcgGTCCTCTA
CAATTCTTTTTGGCATTGTTAGTTATATTGCATTTTTACATGtgctgttt
ttcattttttatgaagtATCTATCATACATGATTTGTGATGGATGTTGTT
CTGTTGACTGCTGATGAAGAAAGTGTTAATTGCTCTGTAAAACAGCGGTC
GCACCAGTTTGCTCTGAAGCAAACTGTGACCTAGTTTCCCGAGCTGTATA
CGGGTAAAAaagttggattcaaaatttgtcacaactgtgctatccttttg
aatattttaaaatttgactcgCCCATTCTGCACGTTTTGCAGAATNNNNN
NNNNNGAATTTTGTCGGTTAAAGGTTTGAGCAGCTGAGACAAATTTGAGA
TATTTGTAGAATCGCTTGTTTTCTGAAATGTGTGGCGTTTTACTACGGAG
ATAATAAAAGCATTTTTTCGGAGATAACGATGTTTATCATGAATAGATGA
AAAACATGATGTGGCGCCCCGCTAGGGAGATAAatgttaagtaaataaaa
atacttaaagtatttatcagcttctgattcaaaccacaagtgattaaacA
ACTCAAAATATACTATACTAGCTCATCAAATTCCCAGAACTTACAAGGCA
TCTtacacatgtttttttataagcatacaaaaatccgaaaacaggctcag
agatgcttaggtccaaagcttaataaggctgaaaaaagcTTGAGTGGATG
CCTAAATCTAAAACACAAATTTAGGGAATTActgaaattccagccaaaat
cgggaaaaaaacatttttcgtaggcccaagtaatgtttgccatatgctta
atttttccccatatctgagcctagatatgcttataagtgcaatgcttata
aaaaatatccatattttcaagttaaatcacgCAAACGAGAGTGTCGAAGT
AGATCATTGTCTAAACCGatgaattcttcatcaaatttaaggcggtcgtt
atccagtgatgtgagcactgttctagttaaagctatctagctaagctcta
ttggctgaccttccagcctcggctggtttattgttttttgcaatgcaatg
ccttctttttcaaaaaaatgtcttttcttttcttccttgaagtgttagca
agccattacaaaaagaatttgataaaagtctgcagtcaaaatgaagatat
ctggaatatcttgactcaatacaattgcttgaattttcaatttttgcagc
aTATGTCGGTTCCATTTTatatgccatttctgggctaaattgtcaacctc
aaatgtctaaaaaggtgctattttagcggaaccaaaatctcaatatctcc
ggagcggaaccgcttatcattaggaggtgtatgacccgtcattttttttc
ttttttgaagctctacagtacaagatgaactaggtttgattgccaccaca
atagtttcaatttgaccctggaatggctaaTAGGACTTTACTTAAAACGT
AACTCCTACCACcgtgtgaagtcgggtaacatAACTtgtgcatcagtgga
gggaaacttacatagccctcaaatgaatgacctggttggtcattaaaata
caaagttaaatcaaaacaaaaatggtagaaatgAGTAGAGCTAGGGTAgg
ccagacccgatcaatcgaacttgttgaACCAATCGaccaatcaaactaat
cgaactccatcgaacaaTTAAAGTACGATTTAAAAGATTAAtcaaaccta
atcgaacactcacaatttttgaagcaatagcagttcaaTTAGTTCAGTCA
GTAAAAGCTtcaattagttcgatgatattaaatccctcgcttgcaaaaaa
cTTTATCCTGGCACCACGCGTGTTCCAAAagacaaaacaatggaaatgcg
TCAATCCGTTCAGCTGAccaaaatgacacaaaaatgacaaaatgaacTGT
CAAGACATTCtaatatctttttgtttggTAAAGCAACCAATGTCAAATAA
AAAGTATCTTGACAAGGAATGAATAAGCTTTTCATATAGCCAAACAGAAT
taccatagcttttaccaaaaaaattatatcaaagattcaatttcagccat
tttcagccaaatccaactttTGTTCTTGCTGGGGCTTCTTGAAAACTTAT
CCTGTCCATGTGTAAACATTCCCGTATGTTTGTTATGTACTTGACTACCT
GTTGTCAAACCGAGATAAGACAGGGGTACtgcaataaaaagttatgcaag
AAAACCCATGATTTCGACCTCAAAAGGTGACTTTCTttaccaataacttt
tgatagaattgttCCCCTAATTTCCCCTTTTCAGTAGGTCTTCCTCTATC
TTATAtgcttcagaaaaaccaaaaacattgcccTAAAAGCTTAGCCTCGC
AAAGTCCCAGCTAATAATATAACCCCCTGATTATATCTTTGTATTCTTAT
CCTATAAATATAACGGAACAGCCATTCTACGGAAATTGCTGTCACGTGAC
TTTTTCCTACCGCGTGATACAAATCGCGCATTTTCATTGGATgttgaaaa
attatttgttaTGTCACAAGAAGTTCCGACttcacatttttaaaaaacaa
aatggcgaaaggacgtttttttatgattatTGAAAGAATTCAGTTGATCT
TAAGGTTTTAATTGCCATATGTACTAAAAGATTCTACAATGTTTGGGGAA
TTCAAATATccaaaagtttttctatttttcattgaaaaatgacCTACAGG
CAATTTATTTGCTtaaggtttgttttttcttcgtgaattttcattttcaa
tctttctttaaagatttaatattttatcaattatcTTGGGATTTTCAGGG
TTTATTCTAGAACTATTTGGGAGTAGAGAGCTTTTTACAGATCTTAAAAA
GGTTTACTAATTCTTTAGATACAgtcaaaagtttagacatgtGTAAAACT
TATTTCTCTGATCGAACATTGACACACGCATTTCCAAATTAGACACGcgt
ggcacgcgattgccatttcgacaaTGCCCGGATATTTGTCCATCTggaat
aaagtccgtagcccctctgtttCGTGCACGGCCAAGTGGCGGAATACTAC
TACTACGCAATTCTGGATACAAGGATACAAGGAAAGTATGTAATCTGTTA
TCAGAAATAATTTCCCCATTTACATtcccaatagaccttttttcaaagag
gccaccctgttgaataattgaataattatgtagtccagcagaaaaaaaat
gataaaaccatgcataattattaaatatgcatgatacagtaattatgcat
ggctctatcattgtttttatagctgaactacataattattcaacagaacg
tcctctttgaaaaaggtggcggagcagcacaaacttgtagaacaaaattg
gtttattgaACTAATCGAGCCTAAACCCAttgatcaaacttaatcgaaca
ctcacaatttttaaaaaatcttagagttccaatctttaatcgttcgatgg
agttcgattagtcgactgttcgattggttcgacaagttcgattgatcggg
tccgGGGTAGGGCatcaacagtcatttttggggcaaagtcaaaaaaattc
aagatgtagtcttttttatgaaaatttaacctattgtaaAGCGTTCTGCA
CAATTTTTAAGGttagaagtccaaaattggccgaacccctcTGGGGgtac
cgtgagagtgggtaacttgcatcagtggaggctaatatgcatagcttcaa
atgaatgacctgtctggtcattaaaatacaaagttaaatcaaaacaaaaa
tggtagagtagaacTGTGAGCGGAGCTGAATATAGCTTATTTTAGTGACC
AGCCAGGCCATTCATTTCAGGGGtatgtatgttagcctccactgatggaA
GTTTTCTGGCCTGTAAATATGCCAAAACTAttacaaatcttatttttttc
atttgctgtactaaatttatgaagaaacaacaaaataatcatattgggtt
gaaaattgtgcccattggagccttaaacgagccgttttaagccaattttg
ggtaagcaaaatgctttttaaggccaattttgcaagttcataaactttaa
actgattaaattacatgtctgaaatttttagaattaaaagtcttcaataa
agtctttaagcaaaattaatttcaagttttttcacttttttcaaaaattc
ataatggcatcttcaaaaatcgctttttagcaagaaaatatcatatttat
caaaaaaatagcattttttaaggcaacattctacaaactgagtttaatgg
tgactgaaattttttttgcagtaatAGTATTCtagagatactccagggaa
atcaaaattatttgggtctgggatgggtgtatgtccgccattatggaaat
aaaatccttgctaagagccatttttcaggcaaaaacccaaatttggactg
aaaaaatctctaaaatgacaatagacaagggctcaaattttcttgcagtg
atagtattctagaaatactgcaggaaaattaAAGTCATATCTGggtttgg
gatttgggtatatccccctttttggaattgaaattcctgctaaatcgcaa
tatttcaagcaaaatcccatttttgactgaaaaaatcattaaaatggcaa
taaacatgaacctaaaatctttttgcagtgatagccttttggaaatactc
cagggaaatcaaaatccttTAGGTTTAGGATAANAAACCTTTTTGCAGTG
ATACATACATAGTcagtcttctggaaatactccagggaaatcaaaatcct
ttggttctaggatttgggtatatccgcccTTATgggattgaaattcctgc
taaaactggctaaaatgcaacatttcgAGCAGAAACccaatttttgacta
aaaacctCTCTAGAATGGCAATAGTTTTGGGctcaaaatctttttgcagt
gatattgTGCTGTAAATACTCCAGGGGTAAAAACTATTAGGTATAAGATG
TTTCTGGGACAACAATTTTTGAATTGaagccagttttaaaatgtatataa
tatgtGACTTCCCAAGCAATTTGAAGTACCTGAAAATCAGGCCGGTCTTG
GTCCGGTATTACGAGCGATCTAGTAGtggtcaaatttttgttttagatcg
GCCTGCAGACCTTCTAGAAATGTAATCTCTAACGGTCCTGGCCGCTTCTA
GACGCTCGTGGCCGCTCGTTAGACCAGTCCAGGCTGTTTGTTAGACCGGT
CCAGGCCTCTAGTTGGTAATTTTTAAGAACGataacatcaaaaaattctt
cTTAAAAGGATGCCGACCGGGCGATCGGGCCGGTCTAGGACCGGACGTTT
CGCAGCGGCAGCTCAATTAATTAGACACGTAATGgccttttggcaaattt
ttaccGGTCATTTACCGGCCCTTAAAAGACCGTCTAAAGACCGGTCCCAT
TTTCAGGCACTTTAAATCGCATATATCAAGCAAAAGagcaatcttttttt
gacggaaTAAGTTTTGAGAATGGAAATGTATGTTGGCTATAAAGAATTGT
CGAGTGGAATAGGATTTTTGCTATAATTTGTTTCAACTAGTATTTTTAAA
TTAAAGGAttgtaaattcatattctttgtttaatgtttaaatatttagtc
aattatgacgtattggatggaaatatgtagcattttaacagagatttcat
ttccataatggtggatgtaaacaaatcccagtctcaaatgattttgtttt
cccaggagaattcacagaatactatcacttcaaagaaatttaggtccatg
tctattgccatttcagagcagtttttagtcaaaaatggggtttttgcttg
aaacgttaCATTTTAGCCGGTTttagcacatatttcaattccataattgC
GTATATACCCTTATCCTAGACCCAaagaattttgatttccctggagtatt
tccagaaggctatcactgcaaaaagatttttggttcatgtttattgccat
ttttaagattttacagTCAAAAATGGGACTTATGCCTGAAATATTGCgat
ttagcaggaatttcaattccacaatggtggatatacccaaatcccaaacc
cagatgattttgattttcctgcagtatttccagaatactatcactgcaag
aaaattcgggcccatgtctatcgtcattttagagatttttccagttcaaa
tttgagtttttgcctgaaaaatagCTCTtggcagggattttatttccata
atggcggacatagacccatcccagacccaaatgatttttatttccctgga
gtatctccagaatactatcactgcaaaaaaaatttcagtcaccatttaaa
ctcagtttgtagaatgttgccttaaaaaatgctaatttttgataaatatg
atattTTCTTGCTAAAAAGCGAATTTTTGAAGACGCTATATgaatttttg
agcattttgctacccaaaattggcttaaaacggctcgtttagggctccaa
tgggcacaattttcaacccaatatgattattttgttgtttcttcataaag
tttagtacagcaaatgaaaaaaataagatttgccaTAGTTTTggcatatt
tacaggcctgaaaaggccagaactGTAGttcgaatcagtacccccaatTG
TTTTGGCCagttttggacttctgaccttaaaaaaaaTTGGGCAGAACGCC
TCACAATgggttaaattttcaaaaaaaaacactacatcttgaatttgaca
tttgacgccccaccctagTAGAGCtagagcagagctgcgtagttaaTTTG
TTTTGGATGGATGCAGCCAGACGTTACTAATCGATAAAATcgattatcga
ttaaaatcgtTACCTAATCTATAATTATTCGATTGATTAAATATCGATTA
GATTAAAAACGATAATTGATAGATAATCGATACTCACAGTTTTTTAGGAC
TCAATTAAATTATCATCATAGATTTTCAATCGATAATATCGATTACAGTG
TTAATAATTGATAATGTTGATTAATATCGGTATAATCGATACCTCGACCT
TATCGATTTTTAATAGATAATATCGATGAAACTTGGATTAATATCCTATA
ATATTATAGcctttttttgacatatttttaaattgacattttaggttttt
gaacataacttttgaaccaatgaagtaaaattaaaaagtaatacaccaaa
tttcaagttaggctttcctctgaatgattccggaacaatctttgaaaaat
gtcttttctactggtactgcctacaatatcaaatcaaataggtaacttat
ttgtggcacacccggtagcTACATAAGCTatattagcctgggaatccaag
cgtaaaattttgttcacagtctagttcatgatatttttgctgcttgttta
acgcttggggcaggtaactcgcctgcagggagatttttccctgcaatgca
ggcttggcctgattggccagctttcggtgtattacttagcagtactttca
cGCGCATTTTGAtcatttcgatgcgcgcgcataatttatggaaaaagcag
aaaaaaggaaaacaaatgaaaatgaaaacagattaatttagaaacaaaat
ggctgttgactggaagtctaaatacctgtggctgatgttttgatgtggtt
tttagtagttttgaaagtctttagagcttgtgaaagagtttttatggtaa
gttgattatgtgtgtacTTGCCTGGGTTTTCAAAGTTTAGACAAGtttca
acaagggttcacacacagactgtttataacattctgtgtcagactaatct
acctgcaccaagctccataatcttagaactttttgaggtgaggtattttt
tgtcttttctaagattatgagcttggattcccaggctaaagctatatgga
catgttttttaattgtttcgtttttggcattttcaaaaaagctaaatttt
gattggggtaacttggaggtccgaaattttcacaggatgttaGTAGGGAT
GATAGGACCCCAAAAAGTTCTTTTCCCAAAATTCTAGCTGTTGTAGGGGC
CAGTTAGGAGCAAATTTTAGCATTTGTATGTGTTTCGCAAAATGATCTAA
ATCAGAGCTAAAAACCCAGGAAGTTGTCTATCTGACCAATGATTCTCATA
GAGGGATGGCAATTAAAGCAGCCTATTGTTAAAAGGCCCACATTTTCTTA
TTGTGGGGCCCTTTTTAGAGCACTTTTTTAGCACCTATTTCCCCATTGAC
AATAAGTGCCAAAACACCATAGTAAAAGGCTTGATTGGATATAAGACTTC
CATAACTTCTTTTGAAATAGTTGAATAATCAAGTTATTAACACCAATATA
ACACTTGAGCTGTTAATGGGCCTgtttggagctaaatttagcatttttcc
actaaaaatacTGCAGCAGAATTACTAGTATGTTTCTAAACACCTAATTA
AAAGGCTGGAGTGGGTGTAAAACCTTCTTAACTTCCTTTGAAGTAATTTA
ATAATCAAGTTATTAACACCAATAAAACATTTGAGCTGTTAAAGGGCCCG
TTTGGAGCTTAATTTAGCATTTTCCACTGGAAATACTGCAATTTATTCTG
CTTCTCTTACTAAAATTAACTTTACACCTAGtctaatttttgctaaattc
agcTCATTTGAGACCTAGGAACATAAAATAACCTCATGAAGTTCTGTTCA
ATTGTGTATCAAACATTAATGATAACTTATTTGATGTTCAAAACCTTTTC
AGGGTCCAGAATCGAgcaaatatttaacattttccgttaaaatgctaaaa
tactgcTCGCTTTTGGTCCATTTAACTATGACAAAGATCACAGAAAAGTC
TTTTTAAGCTTCGTGAATGATCCAAGCATCAAATAGCGCCTAAATGAGCT
ATGAAATAACAATAACCTTCGGGTTTTCAAATAATAGCATAAAGACATGG
CCTTCAAGAACTCTAAGTCCAGTCAATGCTAAATTTTTGCTCATAAAAGG
ACCCTGGAATGCTTTATATCGGCCAAATTTGgtttttctaactttttgaA
TGCCTCAAGTATGCATAATATCAATATCAtagttcttttgtgtttatctt
aacTGTGCTGGTGGATCAAAAAAAAGCCACACCCAATGCTAAAAACATGC
TCATAATGGGACCATACAACCATTTTTAATGATTGCTTATGTTGGTATAT
TGATCTTATAAGGTATAAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATCACCAGGGCATAATTTtagttcattcatt
atattagaAATGAATGATGATTTCCCAAGACCCctaaaaacgaaacaatt
aaaaaacatgtccatatATTCTTGATATGCCTAAATCATTTTTCTAgtgg
aaacaccctaaaaaagccgaGATTTGACCCCTCTCTGTTACTATAAATAG
AAACAGAggtcaaaaacttttttgggtgcttcaaacttatttttcaaatt
caaaacctATGCCATTTGAAAGCCCTTAAATCATAAGAGAAAAAATGAGG
GCTCGTTTACCTGGCAAAAAGTTTTAGTTCGTGAGATATATCAATTTGAA
GCTCGAATTTTAGAGGTTGTAAAAAAGGCAATTATACAATattaaaattt
aagttttgtAGTTAAGAGAACCCAAAACccaactttgtaggttttaaggg
gtatgtggttttaaggggtatccattGGTAGAGgtaattttaaatttgaa
tgaTTTCTGAATAAACTCCCACAAAGTCTTCAATACTGAGAAAATTGTCA
TGCTCTTAGCATTGTAAGACATCACTCTCTTAGCATACTACGGCCTCTTA
GTACATTaaattggtctaatgttgacatccctcttctgaTTTGGACatct
ttctttaaagataggTCTTAGTATACTCTGTTGTCTTAGTATACTACGGT
TAAACCCAATTGCACCCACACATACAAACCTTGGAAGGAAGAAATTTAAA
TCATATACCATATAACATTGGTACTGGAGGAGAAAATTCTAGAAATGCAG
GCATAGACTTAGAAGGTCTGGTCTAACATATGAGCCAAACttttcccttt
ctttttatttagtttGTCGTGAACAAAGAAAAAGCTGACAACATTATAAC
ACAATACAGTGGCACCAATATTGATGGGTGTAGGATTAATATACAGGTAT
GAATACTCTGGGGAAAGGCTTAACCTTCTTAAAttacatgttgttttttt
tataagcaagtgtatgtcccttggtcaggctcgtgtatgcNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNccttttttaaacagataaaaatgaccacttgaaaaatatt
ttaggctgacatatatgctcatgttatgcttaggaattctgcaaatctga
gccttcataatgcttataagcgttatgcttataaaaaaaaaacatgtatc
tatTGGTAGACTTTTCTAAAGGTGCTATAATTTGTTCATTCTTTCGGCAA
ATTCCTCAGCAAATCCCCATCCACAGTAATAGCCAAAAGAATTTCACTAA
CAGTGAAGGTGTCACCACTTCAGAAGGTGATATGATTAGATaattctttt
atcaaaatccTTAGCAAATCACATTAAAGAGCCAAAAGAATTTGACTTAC
AGTGTcattttataacttttttttttaactaaagTCTCATTGCTTAGCAG
GAAAGGTCATTTgtaagtaaataaatgaaagcACTGACCATTTCTtttaa
atccaaaattgaaatttttactgGTATATACCAGAATCTTTTGTTAAACA
TCTCAGGGGAGGGAACCCAGTATTTCGGATTTAAAAGGGAGAAGATAGAT
TTCAgggagggggggggctaaaGTTCTTTCTATTCAACCAAGACCATCAT
AATAGATTCATATTTCTAGAAGagttcttttgttgtttttttattcagat
ttcaaagaACAAACAGAATCTACCAGATAGTGAAAACCTTTGCTTTGAGT
GTGGAAAACCCGGTCACTGGTAAGCTCTTACGTTTATTTTTATGTACATT
TTGTGTGATTTTTGTGCTGGTTTGTTCACTTTCTCCTTAGTTTTGTTTCT
ACTTTTTCTCTAGCCTTATTTTAAACTAAATACTATTATTGTTTACTTCT
TTGTCTTTTTAGGGCTAAAGAATGCCAACTAAGAATGTAAGTTTATCTAG
CTCGTTGATTATGGTTATCCTCCACTCTCTACTCTTAGCTTccacttgtt
aatttttcgaaaattttccaacccccggaccttcttaggacccccccccg
tctattttaaattcttaagaatattttcagctgtcaaagagaaggcccct
tattttgctctgaatagcctgattttagcctatatttaccttttttgggg
ttttcagaagtacaacttccaacccccggcaattagtcccccctgtttat
ttggaacctaagagtaccctTGGTGATGTTCTATTACACCGAGAAGAGAA
CTTCGGTTGTCTAAATTGGGTTTGTTACCCATTTCCTGTCATAAGTGTCA
TAACGATAGTTGGTTCAAAAAATGGTATAATCATTCAGTATCTTGAATGA
ACCAGCTATTAAACTAATGCTTGAAACGAAAATATCAccaacagaacttt
tgattgcAATCTGAAaagatgaaaatatattttattgagcgatttctctt
ttattttattagtGATCGTTATGCACGCCTTGATAGACCTCCACCCAGAG
GTGGCTTTCGTGGTAGAGGCCGTGGGCGTGGGGATTATGGTGGCCGTGGT
GGTTATGGTGGCCGAGGGGGTTATGGTGGCCGAGGTGACTATGGTCGTGA
TCGATATACATAAGTTGACGGAGACTATGGTGGCCGAGGGGGTTATGGTG
GCCGAGGTGACTATGGTCGTGATCGATATACATAAGTTGACGGAGACTAT
GGTGGCCGAGGGGGTTATGGTGGCCGAGGTGACTATGGTCGTGATCGATA
TACATAAGTTGACGGAGACTATGGTGGCCGAGGTGACTATGGTGGCCGAG
GAGACTATGGTGGCCGAGGTGGAGGAAGAGGAAGAGGTGACTACAGCCGT
GACACCTACCAGAGGGATCCTTACGCCAGAGACCCGTATCTTCCGAGGGA
CCCTTATGCAAGAGATCCATACCCGAGAGACCAACACAGAGATTCTTATG
GAAGGGACCCTTACTCAAAAAGTGGATACAGGGAACGCAGCCCGCCAAGA
ACATATGATTATTCAAGGTATACCTCCCATCCCCATAAAAAACGTTAGGA
AAAGTTACACCTATGCAGAAACCATGAGATGGCTGCAAATATACCACTTT
TTTATATATCTTTTTGAAGGGGGTACAAATACTACGCAGGGCTGAATAAT
AGTTCAGTTGACTTGTATTATTCAATGTTAATACTATGAAACCATTGCCT
GTACTGAGAGTATTATTCTTCCTTATAGAGCACCTGCATCTGACCCATAT
GCTGCTGAAAGAAGACGTTTAGCTTACGGGGACTCCACCCCTTCTAGTAG
CTCTGCTCCGTATGCTACTCAAAGTAAACGGGCTGATCCTTATGCTAGTG
GTCAAAGCCAACGAAGTGACCCCTATGCCAGCCAGCGAAGTGACCCCTCT
GCTAGCCAGAGAGGTGATCCCTATGCTAGCCAAAGAAGTGATCCCTATGC
TAGCCAAAGAAGTGACCCCTATTCAAAGGAACGATCTGCTCCCTACGCCA
GCCAAACGACTGACCCTTATGCTACAAGCAGACCAGTACAAAGTCAGCAA
GTTGCTTCTGCGCCGTACGCCACACAAAGTNGGTGGTTATGGTGGCCGAG
GAGACTATGGTGGCCGAGGTGACTATGGTGGCCGAGGAGACTATGGTGGC
CGAGGTGGAGGAAGAGGAAGAGGTGACTACGGCCGTGACACCTACCAGAG
GGATCCTTACGCCAGAGACCCGTATCTTCCGAGGGACCCTTATGCAAGAG
ATCCATACCCGAGAGACCAACACAGAGATTCTTATGGAAGGGACCCTTAC
TCAAAAAGTGGATACAGGGAACGCAGCCCGCCAAGAACATATGATTATTC
AAGGTATACCTCCCATCCCCATAAAAAACGTTAGGAAAAGTTACACCTAT
GCAGAAACCATGAGATGGCTGCAAATATACCACTTTTTTATATATCTTTT
TGAAGGGGGTACAAATACTACGCAGGGCTGAATAATAGTTCAGTTGACTT
GTATTATTCAATGTTAATACTATGAAACCATTGCCTGTACTGAGAGTATT
ATTCTTCCTTATAGAGCACCTGCATCTGACCCATATGCTGCTGAAAGAAG
ACGTTTAGCTTACGGGGACTCCACCCCTTCTAGTAGCTCCGCTCCGTATG
CTACTCAAAGTAAACGGGCTGATCCTTATGCTAGTGGTCAAAGCCAACGA
AGTGACCCCTATGCCAGCCAGCGAAGTGACCCCTCTGCTAGCCAGAGAGG
TGATCCCTATGCTAGCCAAAGAAGTGATCCCTATGCTAGCCAAAGAAGTG
ACCCCTATTCAAAGGAACGATCTGCTCCCTACGCCAGCCAAACGACTGAC
CCTTATGCTACAAGCAGACCAGTACAAAGTCAGCAAGTTGCTTCTGCGCC
GTACGCCACACAAAGTCAAGCATCGACTGCAACTTACGCTACGCAAAGTT
ACGCTGCCACTCCATCTTATGCTACACCTGCACGTACCGCATCCTATTCC
TCTTATCCAGCTCAGACCCAATCAAGCTCCGCATATGCAACTCAAAGTTA
TGCAAGCTCCTCATATGCCACTCAAAGTTATGCAAGCTCTTCATATGCAA
CTCAAAGTTATGCAAGCTCTTATCCTGCTCAAAGTCAATCGAGTGCCGCG
CCTTACGCCACTCAAAGCCAAAACGGTGGAGCTCGTTATGCAACTCAAAG
TTATGCTCAATATGCAGCAGACTCACCGACAAAGAGTTTGCCTTATCAGC
AATCCACTAGTGTTTCTTCTGCTTCCTATGGCACCTCAGCTTCAGCATAC
AGTGCACAACCTGCGGCTGCTACTCCTGGCTCTGCATCAGCTGGCTACAG
TTACAGTTACCGCTAGATACCAGGTTTGATCCTTTCTAAATTGTTTTCAC
AACTTTTTTTTATCGTCACAATTTTGTTGCTATACGTTTTATTTCTTCTA
CAGTTTGAAGTTTTCGCTTTTTTGTTTTGTccgagaaaaagtgaaaattg
ttCCACTTTTTTAGTAGTTGAATGAGAATGGGATATCCAGAACctctaat
tcatgatatgcaccactggagagtcttctgagaagttatttaaaattttc
cacccaatacgtcacttaaacaatagaatttttgaaaattcttggaagcC
TCTTAAGTGGTGTATATCCATGAATTAAATGTACTTTTTCAATGAGAAAG
GGAGATCGATTCACTGAGGTTTTCAATCGTTTCTTTAGGTCGAATGCGTG
ATTCAAATCCAAGCTCTTACGAAGGAAAATCGAGTCGTGTCGAGTCGTGT
CGTATGTCGTATGTCGGGTATTATCGGAAATTTATCGCGGAATATCAAGG
CTTTACTTACGTTCGACgggaaaaagacaaaaaataacaacagATAGTAC
AAATAAATTAAGGACGACggactttcttttttatttcgaacTCGACGTAT
CGTTTTATCGCTTTTTTTACTCGCGTATCACTTTTCGTGGTGCATATATG
TGATTTATTACTGAAATACTTTTTACCTCTTATATGAAAATCATGTTCTA
ATTGTTATGTGTCTACGTagatgtcccaaaaaaagcggaaatatttttat
aaaaagtcgAAACTCATTATCTAAAATGAGCtaaataattgaaataagag
TACAATTCTttgttcaatcaatagatattcaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012945XLOC_012945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023022-exon-sc0000439-1491911889:116936..117190TCONS_00023022-exon-sc0000439-1491911889:116936..117190Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:116936..117190TCONS_00023022-exon-sc0000439-1510915933:116936..117190Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:116936..117190TCONS_00023022-exon-sc0000439-1575043694:116936..117190Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:130698..130781TCONS_00023022-exon-sc0000439-1491911889:130698..130781Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:130698..130781TCONS_00023022-exon-sc0000439-1510915933:130698..130781Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:130698..130781TCONS_00023022-exon-sc0000439-1575043694:130698..130781Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:132584..132654TCONS_00023022-exon-sc0000439-1491911889:132584..132654Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:132584..132654TCONS_00023022-exon-sc0000439-1510915933:132584..132654Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:132584..132654TCONS_00023022-exon-sc0000439-1575043694:132584..132654Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:132798..132821TCONS_00023022-exon-sc0000439-1491911889:132798..132821Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:132798..132821TCONS_00023022-exon-sc0000439-1510915933:132798..132821Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:132798..132821TCONS_00023022-exon-sc0000439-1575043694:132798..132821Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:133348..133469TCONS_00023022-exon-sc0000439-1491911889:133348..133469Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:133348..133469TCONS_00023022-exon-sc0000439-1510915933:133348..133469Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:133348..133469TCONS_00023022-exon-sc0000439-1575043694:133348..133469Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:134468..134738TCONS_00023022-exon-sc0000439-1491911889:134468..134738Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:134468..134738TCONS_00023022-exon-sc0000439-1510915933:134468..134738Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:134468..134738TCONS_00023022-exon-sc0000439-1575043694:134468..134738Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:134950..135758TCONS_00023022-exon-sc0000439-1491911889:134950..135758Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:134950..135758TCONS_00023022-exon-sc0000439-1510915933:134950..135758Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:134950..135758TCONS_00023022-exon-sc0000439-1575043694:134950..135758Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1491911889:136124..136568TCONS_00023022-exon-sc0000439-1491911889:136124..136568Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1510915933:136124..136568TCONS_00023022-exon-sc0000439-1510915933:136124..136568Clytia hemisphaericaexon
TCONS_00023022-exon-sc0000439-1575043694:136124..136568TCONS_00023022-exon-sc0000439-1575043694:136124..136568Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:116936..136568 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.9033	7.44831	10.2396	10.2417	65.8613	52.4742	35.4485	36.5887	15.625	18.6195	16.3854	9.20515	9.51666	11.8941	9.8474	10.0875	12.2609	11.7788	4.71653	2.78439	10.522	15.0746	15.1445	10.2237	22.5366	22.9852	11.6479	9.27375	10.1533	11.8372
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023022 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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