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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022798 ID=TCONS_00022798|Name=TCONS_00022798|organism=Clytia hemisphaerica|type=transcript|length=1234bp
ttttacagagAAATAAAAGAGATTAAATTATCAAAATGTTATCAAAGTTC
ATGTTCCAAAGTGTTGTCAATAAACCTTCTTCAATTATCGTTAGAGCGTT
ACGCGGACGTCATGGTATATTATGTTCATCAGAAAGGCGACACGCACAAC
AagcatttttattttcctcGTCTATCACAAGAAAACAAGACAAACCACAA
TACGAATACGATCCTTCCACCGACACCTTCCGTCCAAAGGATCAGAAAGG
ATTCACAATCAAGACACAGCAACCAAACtatcaaaaccaaaacaataATA
ACAAACAACAACCTCAATGGAAACAATTTTTACGTAATTGGGCGCGAACT
GTTTTTATGGTGACGGGCGGGATTGTGTGGGGTGGTTTGATTTTTGTGGC
GTTATTTGTTGACGTTAAGGAAAGCACTGAGGTGAATTTCCCGCCCAACG
ATCAGTTAGAGGAGGAAGTTCGCTCCCTTGTATTTTACAATTTAGCGCAT
GGAAAAGAAGATCTGGCACGACTAGTGTCtattcaagataaaaagaacaG
ATCAGAACATATTGAGAATCTGCATGAATCAATGCATAATAAACACGATG
TGTTTATGGAGAGTATCGAGAAAATACAGAACCATCGAACAGTGATTGAA
TTAGTTGGCGAGCCTGTACAATTATGTGGTTTTCGGGTAGCTGATAAAAT
CGGTGGCTTACTGCAAGACTTTCAGAACTTAGCTGTTGATTTACATACTG
GAAAAAGTGAGAATATAGAAGCGTTTATGGCAGTAGATACTCAAAATGAT
GATGTCATTTTAAACACATGGACGGCTGAATGTGTTATTGAGGGACAGAA
CGGGTTAGCTCTGTTAAAAATGCAATTCAAAAGACATGCAAGTGAAAACT
CGAAATGGTATTTGGAAGATTGTTATTTGAAAAAGATGGAAGTTAGTGAT
GAGAAGAAACTTTATGGAATCTGATAGAATctgatttttaactttttatc
taaattgttttaattttaagtCCATAAGGGGACAACACATAAATCTATTT
CCAGGGGGTACTCGGTTTGTGAGTTGATTGGTATGAAAATTGACCCTTAA
CATTTTTGGGAGACCCTTTTCGAGAAAtctttcaacaaaattttgataag
ATTTTAGTTTCTTAGTATGTTATCCCTTATTCTAAAATAGTGATATTTTG
TCCAATTTGTTCTTTTCCACGTGCTACTTTTTGA Run BLAST on NCBI protein sequence of TCONS_00022798-protein >TCONS_00022798-protein ID=TCONS_00022798-protein|Name=TCONS_00022798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MLSKFMFQSVVNKPSSIIVRALRGRHGILCSSERRHAQQAFLFSSSITRK
QDKPQYEYDPSTDTFRPKDQKGFTIKTQQPNYQNQNNNNKQQPQWKQFLR
NWARTVFMVTGGIVWGGLIFVALFVDVKESTEVNFPPNDQLEEEVRSLVF
YNLAHGKEDLARLVSIQDKKNRSEHIENLHESMHNKHDVFMESIEKIQNH
RTVIELVGEPVQLCGFRVADKIGGLLQDFQNLAVDLHTGKSENIEAFMAV
DTQNDDVILNTWTAECVIEGQNGLALLKMQFKRHASENSKWYLEDCYLKK
MEVSDEKKLYGI Run BLAST on NCBI transcript from alignment at sc0000432:124259..125492 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022798 ID=TCONS_00022798|Name=TCONS_00022798|organism=Clytia hemisphaerica|type=transcript|length=1234bp|location=Sequence derived from alignment at sc0000432:124259..125492 (Clytia hemisphaerica)
TCAAAAAGTAGCACGTGGAAAAGAACAAATTGGACAAAATATCACTATTT
TAGAATAAGGGATAACATACTAAGAAACTAAAATcttatcaaaattttgt
tgaaagaTTTCTCGAAAAGGGTCTCCCAAAAATGTTAAGGGTCAATTTTC
ATACCAATCAACTCACAAACCGAGTACCCCCTGGAAATAGATTTATGTGT
TGTCCCCTTATGGacttaaaattaaaacaatttagataaaaagttaaaaa
tcagATTCTATCAGATTCCATAAAGTTTCTTCTCATCACTAACTTCCATC
TTTTTCAAATAACAATCTTCCAAATACCATTTCGAGTTTTCACTTGCATG
TCTTTTGAATTGCATTTTTAACAGAGCTAACCCGTTCTGTCCCTCAATAA
CACATTCAGCCGTCCATGTGTTTAAAATGACATCATCATTTTGAGTATCT
ACTGCCATAAACGCTTCTATATTCTCACTTTTTCCAGTATGTAAATCAAC
AGCTAAGTTCTGAAAGTCTTGCAGTAAGCCACCGATTTTATCAGCTACCC
GAAAACCACATAATTGTACAGGCTCGCCAACTAATTCAATCACTGTTCGA
TGGTTCTGTATTTTCTCGATACTCTCCATAAACACATCGTGTTTATTATG
CATTGATTCATGCAGATTCTCAATATGTTCTGATCtgttctttttatctt
gaataGACACTAGTCGTGCCAGATCTTCTTTTCCATGCGCTAAATTGTAA
AATACAAGGGAGCGAACTTCCTCCTCTAACTGATCGTTGGGCGGGAAATT
CACCTCAGTGCTTTCCTTAACGTCAACAAATAACGCCACAAAAATCAAAC
CACCCCACACAATCCCGCCCGTCACCATAAAAACAGTTCGCGCCCAATTA
CGTAAAAATTGTTTCCATTGAGGTTGTTGTTTGTTATtattgttttggtt
ttgataGTTTGGTTGCTGTGTCTTGATTGTGAATCCTTTCTGATCCTTTG
GACGGAAGGTGTCGGTGGAAGGATCGTATTCGTATTGTGGTTTGTCTTGT
TTTCTTGTGATAGACgaggaaaataaaaatgctTGTTGTGCGTGTCGCCT
TTCTGATGAACATAATATACCATGACGTCCGCGTAACGCTCTAACGATAA
TTGAAGAAGGTTTATTGACAACACTTTGGAACATGAACTTTGATAACATT
TTGATAATTTAATCTCTTTTATTTctctgtaaaa Coding sequence (CDS) from alignment at sc0000432:124259..125492 >TCONS_00022798 ID=TCONS_00022798|Name=TCONS_00022798|organism=Clytia hemisphaerica|type=CDS|length=939bp|location=Sequence derived from alignment at sc0000432:124259..125492 (Clytia hemisphaerica)
TCAGATTCCATAAAGTTTCTTCTCATCACTAACTTCCATCTTTTTCAAAT
AACAATCTTCCAAATACCATTTCGAGTTTTCACTTGCATGTCTTTTGAAT
TGCATTTTTAACAGAGCTAACCCGTTCTGTCCCTCAATAACACATTCAGC
CGTCCATGTGTTTAAAATGACATCATCATTTTGAGTATCTACTGCCATAA
ACGCTTCTATATTCTCACTTTTTCCAGTATGTAAATCAACAGCTAAGTTC
TGAAAGTCTTGCAGTAAGCCACCGATTTTATCAGCTACCCGAAAACCACA
TAATTGTACAGGCTCGCCAACTAATTCAATCACTGTTCGATGGTTCTGTA
TTTTCTCGATACTCTCCATAAACACATCGTGTTTATTATGCATTGATTCA
TGCAGATTCTCAATATGTTCTGATCtgttctttttatcttgaataGACAC
TAGTCGTGCCAGATCTTCTTTTCCATGCGCTAAATTGTAAAATACAAGGG
AGCGAACTTCCTCCTCTAACTGATCGTTGGGCGGGAAATTCACCTCAGTG
CTTTCCTTAACGTCAACAAATAACGCCACAAAAATCAAACCACCCCACAC
AATCCCGCCCGTCACCATAAAAACAGTTCGCGCCCAATTACGTAAAAATT
GTTTCCATTGAGGTTGTTGTTTGTTATtattgttttggttttgataGTTT
GGTTGCTGTGTCTTGATTGTGAATCCTTTCTGATCCTTTGGACGGAAGGT
GTCGGTGGAAGGATCGTATTCGTATTGTGGTTTGTCTTGTTTTCTTGTGA
TAGACgaggaaaataaaaatgctTGTTGTGCGTGTCGCCTTTCTGATGAA
CATAATATACCATGACGTCCGCGTAACGCTCTAACGATAATTGAAGAAGG
TTTATTGACAACACTTTGGAACATGAACTTTGATAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022798-exon-sc0000432-1491911889:124259..125492 | TCONS_00022798-exon-sc0000432-1491911889:124259..125492 | Clytia hemisphaerica | exon |
| TCONS_00022798-exon-sc0000432-1510915933:124259..125492 | TCONS_00022798-exon-sc0000432-1510915933:124259..125492 | Clytia hemisphaerica | exon |
| TCONS_00022798-exon-sc0000432-1575043694:124259..125492 | TCONS_00022798-exon-sc0000432-1575043694:124259..125492 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000432 | supercontig | sc0000432:124259..125492 . |
Blast
The following BLAST results are available for this feature:
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