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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022758 ID=TCONS_00022758|Name=TCONS_00022758|organism=Clytia hemisphaerica|type=transcript|length=1568bp
TTCGAATAAGAATCGGTGAGATTACATGGTCGATTATAGTCTACATGaaa
attgatattttgtttttgttttgttactaAGATTGAAAGAAGATTTAGTC
GAATAAGAAAGCAATAGACGAAAAAAGGGCAGAAGAAGAAATCAAGATGA
GGGACACGTTCCATCTTCCACAGATCCCGACAGCATCATGCTACCTTATA
ACGaataaaacaaacaacaacaactcaTACAACAGAAACATTCGCCAGGA
CAACAGATGCAACGCCAGCACGAACCCAAACAAAACGACATCATTATACG
CGCTACATTGTTTCTTCAAGCTAGCGTCGCAGGAGCTTTCTCCATCTTTC
CGTAAACAAGCAATcgtcaagaaaaaagttccctcGAATCTCAAAAGCAA
AAAGAATAccgaaaatcaacaaaacaggAAAAACAAGAAAGTCGTTTTCC
CAGATCTTGTTAATAAAAAGGAAAATGCGAAACGAAAAATAACCTGTGTA
AATAAGATCAAAGAACCTTCAAAACGAAAGGGGCGGAGTATATCAATGTC
CGGAAATCCACCCACAATTCAGGAAGACTCGTCCGGTAATCGACAAGTAA
CGGAAAAGAAACaacggaaaagaaaaacaactttAAGTTGAACCACATCa
ttcgattttgaaaaaaattatttatccaGTAGCCATTGAGATGATCACCC
AGTAGTTATGGTTTCTCCTTGGGAAGGGCCTTTGTTATACAGGTGTGCTC
CAAAAAATAAAGCGGAAAAATATTTATGAAAGTAAAAGGCTCATGATTTA
TGCGAATtgtataaaattaaatttttaatgcGTCATGGATCACCCAGTAG
TGACTTTTATACTTTATTTCAATCTCCATCAACACATATACAGAGTATTT
TTTTTCCCGGGAGGGGGGATACTAGGGTTgcgggaattttacgaccctta
gcgagacaaatttgaccaaattttgatctttcagggggtaacaagttgaa
attttcctattttcccgacccttagcgggactttggaagtccaaaaaagg
tacccttaagggcagcacataccgtaccctccatttgcctaaatacaccc
cccccccggattttAATTTACTGTAGATAAAATGGGCCGtcgaattttct
taaaaatgatgaTAGAATTTTCCGAACTGATAAAACGATATTTTGAAAAG
TGACATAGTCGACATTATGGCATTCTTTGAAGCCTGTTAAAGGTTTTAAC
TTCTATTGCGTTCACAGTAACGGCATTTCTTAAATTGAAATCGATTGCAA
TCAGAAGGTTTCAAGAATGATTTCACCTTTATATAGTAAGGTCATGGTAG
AAGTTCAACAAAACGTTTGTGATGTGAGGTTGTTTTGATGTTATATTTGA
TGGAATTCGTATAAACAACTTGAAACACTTCAACACTTTCAATGTTTTGC
GGTTGAGTTATGGTAATTGGATTTAATAGATGACCCTTGATGAGAGTgaa
atcgaaattatttttactaCTACTATGTGTACATATGTTTGATGGCTTAA
TTATAAGAAAACTTTCAT Run BLAST on NCBI protein sequence of TCONS_00022758-protein >TCONS_00022758-protein ID=TCONS_00022758-protein|Name=TCONS_00022758-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MRDTFHLPQIPTASCYLITNKTNNNNSYNRNIRQDNRCNASTNPNKTTSL
YALHCFFKLASQELSPSFRKQAIVKKKVPSNLKSKKNTENQQNRKNKKVV
FPDLVNKKENAKRKITCVNKIKEPSKRKGRSISMSGNPPTIQEDSSGNRQ
VTEKKQRKRKTTLS Run BLAST on NCBI transcript from alignment at sc0000432:34869..36621+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022758 ID=TCONS_00022758|Name=TCONS_00022758|organism=Clytia hemisphaerica|type=transcript|length=1753bp|location=Sequence derived from alignment at sc0000432:34869..36621+ (Clytia hemisphaerica)
TTCGAATAAGAATCGGTGAGATTACATGGTCGATTATAGTCTACATGaaa
attgatattttgtttttgttttgttactaAGATTGAAAGAAGATTTAGTC
GAATAAGAAAGGCAAACAGTTAAAATTTacgattttcatttataaaagcT
TTTGGAAGTGGCACTTCAACGAACAAAAGTAGGGTCGTACAAGAATTTGC
GTTTTTGAAAGGACCAGTAAACCTTAACCTCTGAATATCAATGGACTTCT
TAGACCTTTATGTTATATTCTAAAATTCGGTACCTTTCACTTTCAGCAAT
AGACGAAAAAAGGGCAGAAGAAGAAATCAAGATGAGGGACACGTTCCATC
TTCCACAGATCCCGACAGCATCATGCTACCTTATAACGaataaaacaaac
aacaacaactcaTACAACAGAAACATTCGCCAGGACAACAGATGCAACGC
CAGCACGAACCCAAACAAAACGACATCATTATACGCGCTACATTGTTTCT
TCAAGCTAGCGTCGCAGGAGCTTTCTCCATCTTTCCGTAAACAAGCAATc
gtcaagaaaaaagttccctcGAATCTCAAAAGCAAAAAGAATAccgaaaa
tcaacaaaacaggAAAAACAAGAAAGTCGTTTTCCCAGATCTTGTTAATA
AAAAGGAAAATGCGAAACGAAAAATAACCTGTGTAAATAAGATCAAAGAA
CCTTCAAAACGAAAGGGGCGGAGTATATCAATGTCCGGAAATCCACCCAC
AATTCAGGAAGACTCGTCCGGTAATCGACAAGTAACGGAAAAGAAACaac
ggaaaagaaaaacaactttAAGTTGAACCACATCattcgattttgaaaaa
aattatttatccaGTAGCCATTGAGATGATCACCCAGTAGTTATGGTTTC
TCCTTGGGAAGGGCCTTTGTTATACAGGTGTGCTCCAAAAAATAAAGCGG
AAAAATATTTATGAAAGTAAAAGGCTCATGATTTATGCGAATtgtataaa
attaaatttttaatgcGTCATGGATCACCCAGTAGTGACTTTTATACTTT
ATTTCAATCTCCATCAACACATATACAGAGTATTTTTTTTCCCGGGAGGG
GGGATACTAGGGTTgcgggaattttacgacccttagcgagacaaatttga
ccaaattttgatctttcagggggtaacaagttgaaattttcctattttcc
cgacccttagcgggactttggaagtccaaaaaaggtacccttaagggcag
cacataccgtaccctccatttgcctaaatacaccccccccccggattttA
ATTTACTGTAGATAAAATGGGCCGtcgaattttcttaaaaatgatgaTAG
AATTTTCCGAACTGATAAAACGATATTTTGAAAAGTGACATAGTCGACAT
TATGGCATTCTTTGAAGCCTGTTAAAGGTTTTAACTTCTATTGCGTTCAC
AGTAACGGCATTTCTTAAATTGAAATCGATTGCAATCAGAAGGTTTCAAG
AATGATTTCACCTTTATATAGTAAGGTCATGGTAGAAGTTCAACAAAACG
TTTGTGATGTGAGGTTGTTTTGATGTTATATTTGATGGAATTCGTATAAA
CAACTTGAAACACTTCAACACTTTCAATGTTTTGCGGTTGAGTTATGGTA
ATTGGATTTAATAGATGACCCTTGATGAGAGTgaaatcgaaattattttt
actaCTACTATGTGTACATATGTTTGATGGCTTAATTATAAGAAAACTTT
CAT Coding sequence (CDS) from alignment at sc0000432:34869..36621+ >TCONS_00022758 ID=TCONS_00022758|Name=TCONS_00022758|organism=Clytia hemisphaerica|type=CDS|length=495bp|location=Sequence derived from alignment at sc0000432:34869..36621+ (Clytia hemisphaerica)
ATGAGGGACACGTTCCATCTTCCACAGATCCCGACAGCATCATGCTACCT
TATAACGaataaaacaaacaacaacaactcaTACAACAGAAACATTCGCC
AGGACAACAGATGCAACGCCAGCACGAACCCAAACAAAACGACATCATTA
TACGCGCTACATTGTTTCTTCAAGCTAGCGTCGCAGGAGCTTTCTCCATC
TTTCCGTAAACAAGCAATcgtcaagaaaaaagttccctcGAATCTCAAAA
GCAAAAAGAATAccgaaaatcaacaaaacaggAAAAACAAGAAAGTCGTT
TTCCCAGATCTTGTTAATAAAAAGGAAAATGCGAAACGAAAAATAACCTG
TGTAAATAAGATCAAAGAACCTTCAAAACGAAAGGGGCGGAGTATATCAA
TGTCCGGAAATCCACCCACAATTCAGGAAGACTCGTCCGGTAATCGACAA
GTAACGGAAAAGAAACaacggaaaagaaaaacaactttAAGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022758-exon-sc0000432-1491911889:34869..34979 | TCONS_00022758-exon-sc0000432-1491911889:34869..34979 | Clytia hemisphaerica | exon |
| TCONS_00022758-exon-sc0000432-1510915933:34869..34979 | TCONS_00022758-exon-sc0000432-1510915933:34869..34979 | Clytia hemisphaerica | exon |
| TCONS_00022758-exon-sc0000432-1575043694:34869..34979 | TCONS_00022758-exon-sc0000432-1575043694:34869..34979 | Clytia hemisphaerica | exon |
| TCONS_00022758-exon-sc0000432-1491911889:35165..36621 | TCONS_00022758-exon-sc0000432-1491911889:35165..36621 | Clytia hemisphaerica | exon |
| TCONS_00022758-exon-sc0000432-1510915933:35165..36621 | TCONS_00022758-exon-sc0000432-1510915933:35165..36621 | Clytia hemisphaerica | exon |
| TCONS_00022758-exon-sc0000432-1575043694:35165..36621 | TCONS_00022758-exon-sc0000432-1575043694:35165..36621 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000432 | supercontig | sc0000432:34869..36621 + |
Blast
The following BLAST results are available for this feature:
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