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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022704 ID=TCONS_00022704|Name=TCONS_00022704|organism=Clytia hemisphaerica|type=transcript|length=1284bp
ACTACAGTCGTGTATGGGTAAtgttattgtttgtttccgcCTGACCCATA
GTGTACAAGAGGGGTTAAGATCCCATCAAACAAACTACTTCGGTAGACTC
TCGTTTATTTGAAATTCTTATCTAAGTTCGATTCTATATTTCAAACTTAT
TCCTTGTTCCCTTCAAGGAGAAtccctcttaaaatactttcgagaattcg
aatctctctgtaatttgaacaaATAAGACTCCTCTTTCGAGTTTGAATTA
GCAAGAGTCGACTGTACATAAGAACATTGCTAACATTATTCAGTTCTGGG
GAAATGATTTCCTTCTTGAAAGTGTAGAAAGGGAACTCGAAAAAGAACAA
GCATTATCTACTTAGATACGTCCCACCTAACCCTATTTATCTCACTCTGC
GTAATCCAAaaaagtcccacctaaagaaacAGAACCAAAATCAACTAACC
CCCTGCAGATTGGGGGATGCACACTGTGTAACCATGTAAtctagataatt
ttttttgacactgcagttgactctctctaattcgattttcaagggaccaa
atattttttcttcgaattagagaaagattcaatTGTAGAAAGTATTTAAC
GAAGCTTTCCTCTTGACAGGAACTGAgatttgttcgaattagagagagat
ttGAATAATGGAAGTTCAATTTAGAGAGTTCACTGAACTTATAAATTCAT
AGAAGCTGGTGTTTCACTTATGCGGTTTTTTAACAGGCTTTTTTTTGGTT
TGTAAAGAAAGCGATATTTTTGAAGGAcgtcaaacagatttcattcaAGT
GTCTGACATTGATGATTAATATTATATAAGTAAATCAAATTTTTAGGTAC
CTCCTAGAGAGAGCTTTTCAGTAGACTCATTACTTCATACGTATAAGATA
TTTTAACATGTAATATTTAACAAGAAGGACTATAGctattttaatcaaaa
ttttatgagCAAATAAAATATCGTATCTGAAAAATCAGTTTTCCGCTGTT
AAGCATTTCTTGGTGCTTTTCGTCTCAAATTTTCGTTGTTTAATATTGTT
AGTAATGAATTTGTGGCATTTTTTCTATGTATTTTCCATAATCACTTTTA
GGGTTGTGTTTGGTAGTGAATTGCTTCGTGGTAGTCAAGTCACATACATC
ATGAAGAGATTGTTAGAAAATTATGATCGGAGAATTGTTCCCATTGAGGC
TGACAGAAAACCAGCGGAGGTTTATATCTCAGTGTACATCACCGGCATGC
GACAAACAGAGAAATCTGGAATGGTAAAGCTCAC Run BLAST on NCBI transcript from alignment at sc0000431:263298..265403+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022704 ID=TCONS_00022704|Name=TCONS_00022704|organism=Clytia hemisphaerica|type=transcript|length=2106bp|location=Sequence derived from alignment at sc0000431:263298..265403+ (Clytia hemisphaerica)
ACTACAGTCGTGTATGGGTAAtgttattgtttgtttccgcCTGACCCATA
GTGTACAAGAGGGGTTAAGATCCCATCAAACAAACTACTTCGGTAGACTC
TCGTTTATTTGAAATTCTTATCTAAGTTCGATTCTATATTTCAAACTTAT
TCCTTGTTCCCTTCAAGGAGAAtccctcttaaaatactttcgagaattcg
aatctctctgtaatttgaacaaATAAGACTCCTCTTTCGAGTTTGAATTA
GCAAGAGTCGACTGTACATAAGAACATTGCTAACATTATTCAGTTCTGGG
GAAATGATTTCCTTCTTGAAAGTGTAGAAAGGGAACTCGAAAAAGAACAA
GCATTATCTACTTAGATACGTCCCACCTAACCCTATTTATCTCACTCTGC
GTAATCCAAaaaagtcccacctaaagaaacAGAACCAAAATCAACTAACC
CCCTGCAGATTGGGGGATGCACACTGTGTAACCATGTAAtctagataatt
ttttttgacactgcagttgactctctctaattcgattttcaagggaccaa
atattttttcttcgaattagagaaagattcaatTGTAGAAAGTATTTAAC
GAAGCTTTCCTCTTGACAGGAACTGAgatttgttcgaattagagagagat
ttGAATAATGGAAGTTCAATTTAGAGAGTTCACTGAACTTATAAATTCAT
AGAAGCTGGTGTTTCACTTATGCGGTTTTTTAACAGGCTTTTTTTTGGTT
TGTAAAGAAAGCGATATTTTTGAAGGAcgtcaaacagatttcattcaAGT
GTCTGACATTGATGATTAATATTATATAAGTAAATCAAATTTTTAGGTAC
CTCCTAGAGAGAGCTTTTCAGTAGACTCATTACTTCATACGTATAAGATA
TTTTAACATGTAATATTTAACAAGAAGGACTATAGctattttaatcaaaa
ttttatgagCAAATAAAATATCGTATCTGAAAAATCAGTTTTCCGCTGTT
AAGCATTTCTTGGTGCTTTTCGTCTCAAATTTTCGTTGTTTAATATTGTT
AGTAATGAATTTGTGGCATTTTTTCTATGTATTTTCCATAATCACTTTTA
GGTATGTTTTGATCTTACCGTAGTACTGACTgcatgaaaacgaaagtaaa
aggGACTTTAATCAGATGCGGTGGCATTGAGTTTCAAAGACCCGAAAGGG
CTAGAGTTGAAACTATTAGTAACTATTAGTATGCGTcgccagatttcaaa
aaatataccgagtgaaaaaaataaggctTATAAAATGGGTCCTTCAATTA
GCGGATACCATGGGGGGAaagggttagtgtccgctaattagaagtgacCG
CCCTTTAAAAACTTATAGAAATTTTGGTATAAGTACTATAAAGGGGTTAA
GTATAGTATGTAAAATTTTGGTCCGAAGTGCTTTTATAGAGACACTGGGA
AATGGAAGATTAGGAGAATGATTATTCAAAGGaaacaatttagtttttat
gaatCATAGTAGTCTTGAGGTCACTGTAATTTATCATTTCTATGACgtaa
gggctagatgtcgtgctttaagctcttccaagcaaaaacaagtgaatatc
gcaaaaatattagtgctattgtttttgaaagcacgcgaagcttctgattg
gtcaagcgctggaattctattgtagtgtcacgtgacctaggtaggatttc
ctacctaactacggaacacttttcagcaaaagtacaacatctagcccttc
gggctttataaatataTTATCAAGATAACGTGTGGATGCTGGACGAAAAC
CAAATAAAGAAGGCTTAAATTTGAACACTTGAGCAGAATTCTTTTGGGGA
ATCACTAGCTATGGAAGTTTTGTGTCTTGGTTCAgaaggaaatttttgtt
ttttgatttattaaatTTTATAGGGTTGTGTTTGGTAGTGAATTGCTTCG
TGGTAGTCAAGTCACATACATCATGAAGAGATTGTTAGAAAATTATGATC
GGAGAATTGTTCCCATTGAGGCTGACAGAAAACCAGCGGAGGTTTATATC
TCAGTGTACATCACCGGCATGCGACAAACAGAGAAATCTGGAATGGTAAA
GCTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022704-exon-sc0000431-1491911889:263298..264398 | TCONS_00022704-exon-sc0000431-1491911889:263298..264398 | Clytia hemisphaerica | exon |
| TCONS_00022704-exon-sc0000431-1510915933:263298..264398 | TCONS_00022704-exon-sc0000431-1510915933:263298..264398 | Clytia hemisphaerica | exon |
| TCONS_00022704-exon-sc0000431-1575043694:263298..264398 | TCONS_00022704-exon-sc0000431-1575043694:263298..264398 | Clytia hemisphaerica | exon |
| TCONS_00022704-exon-sc0000431-1491911889:265221..265403 | TCONS_00022704-exon-sc0000431-1491911889:265221..265403 | Clytia hemisphaerica | exon |
| TCONS_00022704-exon-sc0000431-1510915933:265221..265403 | TCONS_00022704-exon-sc0000431-1510915933:265221..265403 | Clytia hemisphaerica | exon |
| TCONS_00022704-exon-sc0000431-1575043694:265221..265403 | TCONS_00022704-exon-sc0000431-1575043694:265221..265403 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000431 | supercontig | sc0000431:263298..265403 + |
Blast
The following BLAST results are available for this feature:
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