TCONS_00022669 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022669
Unique NameTCONS_00022669
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2268

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022669 ID=TCONS_00022669|Name=TCONS_00022669|organism=Clytia hemisphaerica|type=transcript|length=2268bp
ATTTAgagccttctttaaaaaataatctatGGCTTAATGTCTTGTAAGCT
AAAACTTACTGTATTTGAAACATTTGTATCAATTTTTTATAAAGCTTCTT
TTTATGCTATTTATTTgataattctttttaataacATAGTATGAAACACT
GTTGTCGTACTTACTCAGAAATGATGTTTAAGAAGAGTCAGTGCCATTTA
CAAAGTTTGTTTTATTATGCTTTTCTTGAGAGATGTATGATACAGAATCT
GTAGGTTTGAATCACTTTTTTGTGCAATTTGTGCTGGAAAATAATGCTCA
AGAAACAACATGCAACATGTGTGTCAGTTCAATACATCAGTGTTTCAAAT
ATTGCAAGcgTCAAGATCTCAGTCAAACAACCAGCGGCTGAGCCTCTCAA
ACGAAAAGTACCTCCACCCGTCGCCGCCAAGCCTGCCAAAGTTTATTCAC
CTGCATCCGCTGAATTGAGAACGCCAACTGAAGATTTCCAGCCACCGCCA
ATCTTTGACGATGAAGTGCCTCCCGCCACTAACGGGTCTGCAGATTCCGC
CCTCGATGATGAACTTGATATGCTGACCAGTATGTTATCACTTGGTCTAC
AAAATACACACCACCCTGACTTCTTTGGCGTTTGTTATAAATGTCGAGAT
ACGATTATCGGTGAAGGAAAAGGATGCACAGCCATGGGAAACCAATACCA
CGTGTTGTGTTTCTTATGTAAAGAATGTGaaaagcGATTGACAGGATTGG
AATTTTACTGTCTAAACGATAACCCACTTTGTGAACAATGTTATACGAAT
ACACTGGAAGACTGCGTTGTTTGCGACCAGAAAATTACGGAACGTATTTT
GAAAGCTGTCGGCAAATCATACCATCCTCAATGTTTTAAATGTACGAATT
GTAGTAAGAAGTTAGACGGGGTGCCATTCACATTGGACAGCGCAAACAGA
GTTCACTGCGTGGAATGTTATCAAGTAAAATTCTCACCGAAATGTGCGGC
GTGCAGCGAACTCATCATGCCGACAAACGATCGAGGAGAGACAGTACACA
TTGTTTCCATGCAAAAGAATTTTCACGTACATTGCTATAAATGCGAGGAT
TGTGGTATCTTACTATCGAACGAAGAAGGGCGTGGTTGTTTCCCTATTGG
TGATCATCTACTTTGTCAAAGGTGTAATGGAAAGCGAATGGCTAATACTA
CTGAATTATAGATCGTACATACAAGCTGTAAATCTGAAAGAAATAATTAT
GTCGATCTTTAATTGTCACATATACGGGTTTCGAATTCAAATTAGTTTCG
GTTTTGATCATGTACAATATGCACGGAAATATATCAAGTAGAGAATCTCC
AACCTCCTTCCCTGCGTATTAACAACTTTTTTATTCTTACTGATAACGCC
TGATATTCTCTATGGCGTACATCAGTATCGTAAaaaaagcctggaataca
cgagGACGAGGTTGAACAATCTCCGATTAGCTAAAATGTGCACATTGGTA
TATTATCTAACCAATGAGTTTATTTGCTAGGTATTTTTCGTGTAAATTAC
ACGGAGAATCAAGACAGGCTAATTTGAAATCCTCAAATTCAGTTGGTCAC
ATCGAAACTTCCATaaaaaattcccttttgtcTTTTCTATAGTATGTTTG
TAGGTGTTTGTagcacttttatttttttctcgcATATATTGTACatacaa
ttataatttttacattaaacttttttgtacctaaaatctttatttctttt
aaatattgTGTCACTTCATCTATGCCCATACATGGCCTCTTATAGTATAG
TTTATACTTAGCGTGttctcaattttatttattCTAGAACCCCGGATTCA
TCATAGTTTTCAGACTTTCAACTCCCCTGGATCTTAGGATATTAAGGAGG
TCAATTGGTTTACTTTTTTTGAATGGCTAAGGATTCCAATAGGATTCTAG
CTCGTTGGACTTCTTTCTTTGTTATGCACCAAATTTCTGTTTCTACATTA
CTGTTTGttgttttattgtttcaaaaatctttatttttaatgtattttat
TAACTAAACTTAAATATTGATATTCTAAAAAGATatgatttaactttttt
tataactttGTAAAAGTGACTGACTCCGCTCTTTTAGTTTTTGACTGACT
CAAAATACTCCAACCAAACTCGTGATCTTTTACACaatacttaagggctc
tgaccatagtgaatttttaacatttgccacttacaaaatataaatttcta
cttgatgtagcacacaaa
Run BLAST on NCBI

transcript from alignment at sc0000430:262496..272804-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022669 ID=TCONS_00022669|Name=TCONS_00022669|organism=Clytia hemisphaerica|type=transcript|length=10309bp|location=Sequence derived from alignment at sc0000430:262496..272804- (Clytia hemisphaerica)
ATTTAGAGCCTTCTTTAAAAAATAATCTATGGCTTAATGTCTTGTAAGCT
AAAACTTACTGTATTTGAAACATTTGTATCAATTTTTTATAAAGCTTCTT
TTTATGCTATTTATTTGATAATTCTTTTTAATAACATAGTATGAAACACT
GTTGTCGTACTTACTCAGAAATGATGTTTAAGAAGAGTCAGTGCCATTTA
CAAAGTTTGTTTTATTATGCTTTTCTTGAGAGATGTATGATACAGAATCT
GTAGGTTTGAATCACTTTTTTGTGCAATTTGTGCTGGAAAATAATGCTCA
AGAAACAACATGCAACATGTGTGTCAGTTCAATACATCAGTGTTTCAAAT
ATTGCAAGGTTAGAAAAGCCTTTTATTTTTTGGTGAGGTTGATTGTCAGT
ATCTTGGTTAACAGAAAGATCTTCCTTTTATTTTGAAAATGGAAAAATTT
TGAATATCAAACAAGAGACTTGAGGGGTTTGATGGAATTGTACAAAATAG
ATTATACAAGTTCTTTCAAACTTTCCACCATTTAATGAGAGAGTGTCCCT
TCAATATGAACTGTTTATTGAGCAAAGAAGGGTGCTTATTTTATAACATT
AGTTAATCAAAATTATATTTTCTGACCTTACAAAGTCATCATTCCTTTAT
AGTTGTATAAACATGACAAAGATTTGACAGAATCATTTATCTTTTAATAA
GTGTGATCATTTTTCCAGATTGAAACCACTTAGAAATGCCTTTGCGTAAA
TTGAAACCTCTCCATTTAATTTACCAACAATAAAAAGATCAAATATCTGA
GGTTGACATCACATTTATATCTTTCTTCAATCTGTATAATATCCTTTTTT
GGTAAAACTTCGACAAATCCTGTAGATTTTTTATTGAAAGAAATTAAAAT
CTTCAAAATCATAAAATCTTTGGTTTTAAAAGAGTTGTTAATACCTATTG
GTTTCTTTGATAATACAGATGCTCAATTTCTTGGATTTCACTACTCTAAT
AAAGTAATATTGCACATCTAAATCTAAATTCATAGTAACCTTTCTTATTA
GCTTCTATAATTGTCTATAATTATAGATATAAAAGTTAATTAACGGTATG
GGACTGTCCTACTTAATAAGTGATCTCCTTTAGAGAAAAAGAGAAAACTG
GCAAAATTTATGCCAACTCATAAAATGAAAAAAAGAACTTCAATTTAACT
GGCTAGTTAAGTAAGATTTATTTGTGAGAGAATGAATTTTACTGATAGAA
AAACCTTGGTTAGATCATCTATACGGTAAATCAGTTTTAGGGTTTATTTT
TTAATATTTTAATAATACCTCAAAAAAACCTTTCCATCAAAATCAATTTC
TGCTTTTTAGGTATAAGGCGAGGTATGATAGTGCATTGTAAAAAAGTCAT
ACAAATATTTACATTTATTTAATTACAATAATTGTTTTCAACTCAAATTT
CTTAAATACAGTATAGTATAAATTAAAAAAAAACCTGATGCAAAACTTGA
AACAAGTTAACCTTACTGAGATAAGGTTTTCTGCTTTCTGCTTTCAAATT
TGCAATTCAACTTTTTCAATTGGTCCTTAAAACTATTATCTGATGAATTC
ATTTGAAACTGGAGATGATCTTAGCTTCTTCGGACCTAAATCTTAAGACT
ATTAGTCCTCCAGTAAAACTCATGCTAACCATCTAGACTTTTGAGGTTCA
AATATAGTTAAATTACAAGCACAAATTGATACTATATGTTTTTGCATGAA
AGCATGTAATATGAAATGACTTTGATGATAACCTCTACTGCTATTCAAAC
TATTGAATTCTTAATGAACGTGGTATGTAGAAATTGCATTCCACATGAAT
CTATTCGTGAAAAGTTCAATGGAAAATGACTTTTATTTGCTCTTTTATCT
TACTTATTATCAGATATAATGTAAAACACGCATTTGTGACCTTTTAATTA
ATTACTTCATGCTGGTTTCAATTAAGATCCAACATGGTTTTCGTGTAAGA
ATAAAAGTCACTACAGAATTTAAAATTGCTGATGTTCGATTTTGACCAAA
TGCCACCTTCAATTTTGGAAAGGGATCCAAATGTGAGATGGGAGATTACA
AACAACTTTTTAAGCTACGATCAAGGTTTCTTTGAAACTATCATTTGAAA
ACTTTTGAAATTCATTATTCTTATATTTAAACTTGTGCTCAAAATATGCT
CGTGGTAAGCTAATTAGTCTTTTGTTGTTATATATTATTGATTAAAATTC
GGATCATACTTAAGCTGTGCCATATAAACATAAACATAAATTTTTATAAT
CACAACATACGTAAACAAGCAAGACATCTTCGAGAAACGGAAGTAAATTG
GGCATAAGTTGTTCTTATTATTTCTCGATTTTTCTTTTTTCAATTATGGT
TGTGCTAATTGAAAGTTCAACAACGTATGTTTTTCAAAGTGAAGGTTTTA
GGTTTGTTATAATTACTACTTTGTTGACTTTTAAGGGCTTGATGTAGTTT
TCTTCAGAAACTCTGAGAATATTAATTTTGTAAAATTAAGTTATTTCAAT
ATTAAGACGATAGGTCGATTAGTCAAGTAACTTAAAATTGACTTCCAAAA
GTCAAACAAGGGCAATCTTTTGTAAATTTATAATAGATTCTACAATTATT
ATAACGTAACAAAGTTCTAGGTGCACGAGGGCCTCTGGAACTGATCGTGA
TTGTTAGCATTTTTCGGTTTCATTTTAAGGCAAAAAGTGCACACTGCCCA
AACACAACTGACGAAGTTTTCTTTAATTCAGACAATTATCTTCTCTCTGA
GACAGACAGTTATATAACTTTTATCCCTTTCCTCATATTGCAGTGGTATC
CTCTGAGAGAGAGAACTCTATGATCCACCCTTTATTTAATGTAAAATTGT
ATTTATTTTCTTCTTTCTTAGCGTCAAGATCTCAGTCAAACAACCAGCGG
CTGAGCCTCTCAAACGAAAAGTACCTCCACCCGTCGCCGCCAAGCCTGCC
AAAGTTTATTCACCTGCATCCGCTGAATTGAGAACGCCAACTGAAGATTT
CCAGCCACCGCCAATCTTTGACGATGAAGTGCCTCCCGCCACTAACGGGT
CTGCAGATTCCGCCCTCGATGATGAACTTGATATGCTGACCAGTATGTTA
TCACTTGGTCTACAAAATACACACCACCCTGACTTCTTTGGTAAGTTGGT
AATCAAAAAGTTTTGTCTATTACTCTGATTCGAATTTGATTAATTTAAGC
CAAGCGTATGAGAGAATGAACAGGATTACATTTAATCTCAAGAATATCCG
ATGTGATTCTTGTTGTAAAACTTCGCAAGGAGTAGGACCCATTCATTCCC
CAGACAGTGGGGAGGGCGTCTAAATGGCGTCTCCTTTTTAAAGCTCGTCT
CATTCTTCTGTTCTATCATAGGCGTTTGTTATAAATGTCGAGATACGATT
ATCGGTGAAGGAAAAGGATGCACAGCCATGGGAAACCAATACCACGTGTT
GTGTTTCTTATGTAAAGAATGTGGTAAGTCGTTTTCATTTCTCTCAAAAA
GCAAATAATGGAATGAAGATACCGGGTGTTCCAGAAGAAAGTCCCCCTCT
TTGAAGTGAAATTTCCTGAGTTCTATGAACTGTTAAAGAATCGATCCTTT
TGCATTGGAAAGAGGAAGGATAAACTTAAATTTTGAGAGTTTATTTGTCA
AATTTGGTCTACTACATTAAAAGTTATGGCCTAAATGCTAAAATATTGCT
TTTCAAAAAAGTCAAAAAAAAGGCGAAAAAAGAGGATAGGAAAGTATTCA
TATTGGTTTTAGAATGTTTCAGAGCAAGGATCCCGAGCGGTTCTGTTCAG
ATTAAAATAATGGAGCGAAATCGTTTCGGTCTGTTTGATTTGTAACGTCT
TCTTTTTCGACGTTTAAAATGTGGAATCGTCTTGTTTTCGGAACGATGTG
GAGCCGTAGTGTCTGGACATGGTCAAAGTCTTGTTCTTAGTATACCAATA
CCTTTTAAGAAAGGAAAACATTTACCTATTTATTAAGTCTAGTTCACAGA
ATCAACCATTTGGTTGACTATACTATGTCTTTTTATCAAAATAAAATGTC
GTTAACATGCCTACACAGTACAATGCTCCAAGATTTCCTATGCAAGGAGT
TTGGCACTCCTTCCTTTATATACTGAATTGAATATGATAAAAAATTAGAA
ATGTTTTATAAAATTGCTAAGTAGGAAAGAATGTTTTTCAAATTTTATCA
AGTTTTTGTTCTTTTTGTTCGAACTAATTTTTCACAGGTTTGCTTGCTTG
TTGTGCTAAAACTTAAATGGTGAACTATTTCATTTCATTTTAAGGACTTA
CTGTTTGGGAGAAAGATGTTTTATTTGACTTGGTGATGTATCTTTCTTTA
CTTGCTTATCGACATTATTAGAGTTGCTAGTTCTTTGATGTTCAGCAGTT
TTCTTTTGCGGATCACCAAAGCTTTATGAAACCTCTTAGGATCTACCAAA
CTTTTATACTCTTATATAAATTTTTTTTACAATAAGTATAGCTATACTTT
TTGGGACTTGATGTGTTTAAATTTTTATGTGGGTCGAATAGTCAGATAAT
GTCAACATCGGTCTCCTAGTTTCGTTCGAGTTTCAAGGACACCATGACTT
GGCAACACGCGTCAGTAGAAACGCGATGTATTGTGGGTATATCTAGCCAG
ATGATTTATGGGACTTTCTGAAGATAACTGTGTTTCTTCATTTAAAAGTG
GGCGGTTTTCAATTTTCCATCGCGAAGCTTCTTATTTACTTCTTCTCTTT
TACATCTCCCTTCAAAACAGTGAGATTAAAATTAATCAATATCTGATTTC
TCAAAATTCTTCCCTCCTATATTTTTCGATTTATTCAAAAAAATTGAAAA
GTTTTTTTTCTCACGAAGAACAACGATCTCTATTTGGTCTGTTGAGACAA
AATTTTTTTCAAAGTTTGAGTCTTTTATAACGCTCTGAATCTTTTCATCT
ATCTTAAATATCAAGCTGTACTAGACTAGACCATGCCTTATCCTCTGACA
GTAGAACTAGCGTTGGTTCTTTTTATCTATCTTAAATATCAAGCTGTACT
GTACTAGACCAAGGCTAACCTTTGATAGAAGAGCTGTAGGATAATTGCTA
AACTTGACAGAAAGTATTCAGGCTAGATTTCGTCTCAATCCCTTTCTCTA
ATAATTTGGCCAGATAAATTCTAAAGATAGCTTTTTCTGGAAATAAAGAG
ACATGGGTGTACATCGAATTTTTCACGGATGGATCAATTGAGGGTGATAT
TTCGTGCAGCTGTCATCAACTGTCAAATTTGGATCTATGCATATTACGTG
TCACCAAATGTGTCAGGTTTGCATTTTGGTAGCATGTATTTTTTTGTTTG
CAATGCAACAAATACATTTGTATACAAAAATCGTTGTTGATAGATTTGTT
ATGTAAGCAATTATTGAAACTTAGGGTTTCTGTATTTGTAAGAGTTTTAT
GTAGGGATTATTTAAGTTGTTTGTTTAGCTTTTATTGGCTGGTTTTTGAG
AGGTTTGAAATTATTGCTAGTTTCGATCTTTGGAATTACTGAAGACTGTA
AAAAAATTATATTCCAAAAACAGAGTATGGTGTGAGATGTGTGCAACATT
TGCATTTCTTTTGTTTATCTTGTGAGGGTTACGTAAAATATATTACAATG
TCAATATTAAAAGAAGTACATATTTTTAATTTTCAGTTTTCAGGTCAAAG
CAAGTGGGATATTGAGTTACTTAGAAATTCCTTCTTTTTTTTTGCACTCC
GTCGGTTTTGAAACATTTTATAGATTCAAGAAATTGATTGGATAAACAGG
GTCGGGAGTGTAAATAATTTTTCAATCAGTACTTTCATTTTTCTAGAGAG
GCTAGTGTTAATTGATTGAACGTTGACTTGAATTAAAAGTTACTTAAGAA
ATAGAAGGACAAAAACAGAGAAGAAATTTTTAGTTGAAAAATTGGTTTAA
GCAATTTTTTGAGCTTTTAATCGTGTTTGTTTTCTTTTCAATCTCCACAA
AACGTGGTCACCTCATTATTCTTGAAAATATCCACGAAGAAGTTTTTATT
TAGTATTTACGGTCTGTGGATTATTGTTCTGGGGTTTAGACATTATTCTA
TGTCCACTACATAGTATAATTTTTTCGACCTTCTTGTTTTTGGGTATTGT
AATGCTTCACGGATTTCTAAATAGTATTCAGTTACTTTAAAGTGAAAATG
ATAAATAAATTATAAAGACTCTATCTACATTTCACAAAAATGCCACCGCA
AAAAGTTATTGTTAAGGCACGGTACACATTTCCCTCAATTAGTAAGTATC
TACCCTGATCTACCATATTGGAGTATTTTCATTCGAAAATCTTTTTGGTT
TAGCTTTGTTGCGATGGGGGAAGGATGCTCATTTTTTCAACGAGACTGAG
TTTTTACCAACTAAGGATCTTCTTTAGGCGTACAAACTTTCGCGAGCAGA
AAATTTCGCGAACCGCCTCCTTAAGAATATTCAAAGACATTTACTTTCGT
GAAAAAGGCCATAATTCGCGAAAATATCGCGAAAGTTTTCGTTCGCGAAA
GTTTTTACCCCAAAGCAACGTCTTGTTAGGGATCGATAATTTTGTTAATT
GAGTATCTTGAAGGAGAAAAGGGAAATCTTTTAAGTAGACCTTAATGGAG
TTGGAGTATTTTCATTCGAAAATCTTTTTGGTTTAGCTTTGTTGCGATGG
GGGAAGGATGCTCATTTTTTCAACGAGACTGAGTTTTTACCAACTAAGGA
TCTTCTTTAGGCGTACAAACTTTCGCGAGCAGAAAATTTCGCGAACCGCC
TCCTTAAGAATATTCAAAGACATTTACTTTCGTGAAAAAGGCCATAATTC
GCGAAAATATCGCGAAAGTTTTCGTTCGCGAAAGTTTTTACCCCAAAGCA
ACGTCTTGTTAGGGATCGATAATTTTGTTAATTGAGTATCTTGAAGGAGA
AAAGGGAAATCTTTTAAGTAGACCTTAATGAGAGGACAATCGTTGATAAT
ATTGAGATTCAAAATTTCACAATTTGAACAGTTAGATTAATTTGAAAACT
TTTTCCTTTTCTTGAAGAAAATTTAAAGATTCAAGGTGTGTCAATTATTT
TTTCTTTTTTTTACAGAAAAGCGATTGACAGGATTGGAATTTTACTGTCT
AAACGATAACCCACTTTGTGAACAATGTTATACGGTATGTTGTAGTAAAA
TAGTTCGTGGTCACCCCTTTGAGATGCGGGGAAAATTCAATCTACCTAGC
AAGGGTGCAGTGCTGGCGAGTTTCAATAAGGACGAAATTCATACGCCTTC
ATACCCCATCTCCTGAAAATTTTTCTGAATTTCCTCACAAACATCCCCAA
GTATAGAAATTGTACGTAAAAATGCTATTACTATTCGCAATGTTATCTTT
TTTGCATTTCTGATTGAGATTTCACAGTTCCCGCCATCATTATAAGATCT
TTGATGATTCGTTTGTAACTTTTGCTTTCATTTGATTACCCCGCTAAACC
AAATGGTGTATCTTCACTGGTCGAATTTCGCACCTCTGTTTGACAAGTTA
TTTACAAGTTAAAATTATGCCTTATATATATGTTTTCTTTGCCCCAACAT
TTGTAGAATACACTGGAAGACTGCGTTGTTTGCGACCAGAAAATTACGGA
ACGTATTTTGAAAGCTGTCGGCAAATCATACCATCCTCAATGTTTTAAAT
GTACGAATTGTAGTAAGAAGTTAGACGGGGTGCCATTCACATTGGACAGC
GCAAACAGAGTTCACTGCGTGGAATGTTATCAAGTGTAAGTCATAAATGT
TTTTATTTTTTTTCGACTTTACTCGGTCATTCTTCCAATGGAAAGTTTTC
TTTAGGCCTTTGATTGTTTGATTGCCAATGTCGGCTAAATCCTCCATTAT
TAATTCATATAGATTTTAAAACTGTCACCTGTCCCTAATTTGGGTTTTAC
GCTAAAAATCTTTACTGCAAGTGTTTATACCTAAAATTTGGGCACCATCT
TTTAAGGTCTTTTTCTAGTAATAAGTTTGATGAATTTCGAAAATTTTTAA
AATTCTTGTCATTATTATAATTTTTGTGACGTCATTAAGCCTTTTTACTT
TGAGATCCCTATGAGATCCCTTTGCACAAACTGCTTCAAACCACTAAAGC
CTCACTCTAAGTACTTTGTTTTCAATCATCCGATTATATGTTTTTCTTCG
TTAGTTTTTGAAATTTAGTTTTACATAATTTATTTTACATTTATTTGCAG
AAAATTCTCACCGAAATGTGCGGCGTGCAGCGAACTCATCATGCCGACAA
ACGTAAGTTTATATGAATACCTGCTAGATATTAAACTTATCAATACTTAT
TCGCTCTTGAATAAAACATTCACGTTATCTTGAAATAAACTTTCATCATG
GACCTAAAATCAAATGAAGACGCCTAGATAACTTGGATTCTAAATCCAAA
CTGAAAAGCTACCCTTTCGGCAATTAATTGTCAACTTTTAAAGTTTAATC
CTTTTTTAATAAGAACAAACAAAGTATTAAGTTCAGGCATTTCAGGTTAA
ACCAAAGTTATGCATTAACACTTAATCTGCCATTGTGGAATCAAACGTTC
GAATTTGTAGAAGCAACACTCCTCACGCAAATCGAATGTTTGATTCCATA
ACGGTGGAATTTAAGTTTATATACAGGGACCAGGTTGGGATCTTTTTTTA
TGTTTTACATAGAATGACCAGAATTATCCATTTTATTTTAGGATCGAGGA
GAGACAGTACACATTGTTTCCATGCAAAAGAATTTTCACGTACATTGCTA
TAAATGCGAGGTTAGTAAATGTTTCTTCATAGTAATCATCGCCTACTAAT
CTCAGACTGTAGTGGACATATTTTATTTATTACCGTTCCAGCCCGACTGG
CGTGCCAGTATAGATAACCCATCGTTTCAAATGGACGTGTTTGATATTTT
TGTTATATCATAACTAGACGAAGAGAATATTTTTTAAAAAGCAAAGCGTC
CAACACGGAAACCCCTTATAAAACAAAAGATTTTTTTTGTACAAGGCTAT
AACCACGAAACTTAAAATAAATTTTTGTTCTCTCTTAGGATTGTGGTATC
TTACTATCGAACGAAGAAGGGCGTGGTTGTTTCCCTATTGGTGATCATCT
ACTTTGTCAAAGGTGTAATGGAAAGCGAATGGCTAATACTACTGAATTAT
AGATCGTACATACAAGCTGTAAATCTGAAAGAAATAATTATGTCGATCTT
TAATTGTCACATATACGGGTTTCGAATTCAAATTAGTTTCGGTTTTGATC
ATGTACAATATGCACGGAAATATATCAAGTAGAGAATCTCCAACCTCCTT
CCCTGCGTATTAACAACTTTTTTATTCTTACTGATAACGCCTGATATTCT
CTATGGCGTACATCAGTATCGTAAAAAAAGCCTGGAATACACGAGGACGA
GGTTGAACAATCTCCGATTAGCTAAAATGTGCACATTGGTATATTATCTA
ACCAATGAGTTTATTTGCTAGGTATTTTTCGTGTAAATTACACGGAGAAT
CAAGACAGGCTAATTTGAAATCCTCAAATTCAGTTGGTCACATCGAAACT
TCCATAAAAAATTCCCTTTTGTCTTTTCTATAGTATGTTTGTAGGTGTTT
GTAGCACTTTTATTTTTTTCTCGCATATATTGTACATACAATTATAATTT
TTACATTAAACTTTTTTGTACCTAAAATCTTTATTTCTTTTAAATATTGT
GTCACTTCATCTATGCCCATACATGGCCTCTTATAGTATAGTTTATACTT
AGCGTGTTCTCAATTTTATTTATTCTAGAACCCCGGATTCATCATAGTTT
TCAGACTTTCAACTCCCCTGGATCTTAGGATATTAAGGAGGTCAATTGGT
TTACTTTTTTTGAATGGCTAAGGATTCCAATAGGATTCTAGCTCGTTGGA
CTTCTTTCTTTGTTATGCACCAAATTTCTGTTTCTACATTACTGTTTGTT
GTTTTATTGTTTCAAAAATCTTTATTTTTAATGTATTTTATTAACTAAAC
TTAAATATTGATATTCTAAAAAGATATGATTTAACTTTTTTTATAACTTT
GTAAAAGTGACTGACTCCGCTCTTTTAGTTTTTGACTGACTCAAAATACT
CCAACCAAACTCGTGATCTTTTACACAATACTTAAGGGCTCTGACCATAG
TGAATTTTTAACATTTGCCACTTACAAAATATAAATTTCTACTTGATGTA
GCACACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012735XLOC_012735Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022669-exon-sc0000430-1575043694:272447..272804TCONS_00022669-exon-sc0000430-1575043694:272447..272804Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:269615..269883TCONS_00022669-exon-sc0000430-1575043694:269615..269883Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:269282..269383TCONS_00022669-exon-sc0000430-1575043694:269282..269383Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:265571..265638TCONS_00022669-exon-sc0000430-1575043694:265571..265638Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:264970..265148TCONS_00022669-exon-sc0000430-1575043694:264970..265148Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:264453..264504TCONS_00022669-exon-sc0000430-1575043694:264453..264504Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:263945..264013TCONS_00022669-exon-sc0000430-1575043694:263945..264013Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1575043694:262496..263666TCONS_00022669-exon-sc0000430-1575043694:262496..263666Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:272447..272804TCONS_00022669-exon-sc0000430-1510915933:272447..272804Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:269615..269883TCONS_00022669-exon-sc0000430-1510915933:269615..269883Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:269282..269383TCONS_00022669-exon-sc0000430-1510915933:269282..269383Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:265571..265638TCONS_00022669-exon-sc0000430-1510915933:265571..265638Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:264970..265148TCONS_00022669-exon-sc0000430-1510915933:264970..265148Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:264453..264504TCONS_00022669-exon-sc0000430-1510915933:264453..264504Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:263945..264013TCONS_00022669-exon-sc0000430-1510915933:263945..264013Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1510915933:262496..263666TCONS_00022669-exon-sc0000430-1510915933:262496..263666Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:272447..272804TCONS_00022669-exon-sc0000430-1491911889:272447..272804Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:269615..269883TCONS_00022669-exon-sc0000430-1491911889:269615..269883Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:269282..269383TCONS_00022669-exon-sc0000430-1491911889:269282..269383Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:265571..265638TCONS_00022669-exon-sc0000430-1491911889:265571..265638Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:264970..265148TCONS_00022669-exon-sc0000430-1491911889:264970..265148Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:264453..264504TCONS_00022669-exon-sc0000430-1491911889:264453..264504Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:263945..264013TCONS_00022669-exon-sc0000430-1491911889:263945..264013Clytia hemisphaericaexon
TCONS_00022669-exon-sc0000430-1491911889:262496..263666TCONS_00022669-exon-sc0000430-1491911889:262496..263666Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000430supercontigsc0000430:262496..272804 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.174533	1.54621	0.339905	0.770046	0.802104	2.53508	2.29379	2.86267	0.334038	0.827519	0.803209	0.932276	1.9724	1.99692	0.337633	0.364595	40.4073	9.13804	1.5681	1.31563	127.741	132.038	8.76367	8.2546	3.40477	6.75741	0.271769	0	0.876758	2.01712
Blast
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BLAST of TCONS_00022669 vs. Swiss-Prot (Human)
Match: LPP (Lipoma-preferred partner OS=Homo sapiens GN=LPP PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.222e-67
Identity = 101/212 (47.64%), Postives = 141/212 (66.51%), Query Frame = 3 
Query:  555 DDELDMLTSMLSLGLQNTHHPDFFGVCYKCRDTIIGEGKGCTAMGNQYHVLCFLCKECEKRLTGLEFYCLNDNPLCEQCYTNTLEDCVVCDQKITERILKAVGKSYHPQCFKCTNCSKKLDGVPFTLDSANRVHCVECYQVKFSPKCAACSELIMPTNDRGETVHIVSMQKNFHVHCYKCEDCGILLSNEEGRGCFPIGDHLLCQRCNGKRM 1190
            +DEL+ LT  +   ++N    ++FG C +C + ++GEG GCTAM   +HV CF C  C  +L G  FY +     CE CY NTLE C VC + I ERIL+A GK+YHP CF C  C + LDG+PFT+D+   +HC+E +  KF+P+C+ C E IMP   + ETV IV++ ++FHVHCY+CEDCG LLS  + +GC+P+  H+LC+ CN  R+
Sbjct:  390 EDELEHLTKKMLYDMENPPADEYFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHILCKTCNSARI 601
The following BLAST results are available for this feature:
BLAST of TCONS_00022669 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LPP1.222e-6747.64Lipoma-preferred partner OS=Homo sapiens GN=LPP PE... [more]
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