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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022666 ID=TCONS_00022666|Name=TCONS_00022666|organism=Clytia hemisphaerica|type=transcript|length=801bp
GAAACGCTGATGTTTGCCAGttgaagattaaaataatttgaatatattgc
ttttttctttctagatatTCCAAATGGACTTGCCGTATAATGGTACAGCT
ATCAAGTATCCCGGATCGAGAAGTCAACGCATCGTCATACTGCACATACA
ACATTAATTAGGAAAAGGGACCACTGGGTGAACCGATAATCGAGATCGTT
CTCAGGTAGACATGACTCTTAATTGTCAACTTGACTAAAGCACGacagaa
aaatcttttgttcACCATCGAAGCGCGAAGAACTATGCACCCGATTGTAT
CCACGGAGATTATATATACAAATTCTTCTATTACACCCctatatcagtga
cccggtcagctCCACTCAATGATGAATTACCCGGTGAAAGAAATTGCATA
GAACCCAAATCAAAGATCTTATTTATGGTATTACCGTCTTACCCCGGTCA
ATTTCAGTTTTTTAAGAATTCTTGAATATtagttgaaagtcaatttttcc
ctaCCAGAGGAAGTTAAAGGTTATCACTTAGTGAGCTTTGGAGATCCTAT
ATTTTAAGACCCGgtgggtttcaaaacttcactgggtcactgagaaaggg
gtgttctattatatatgaaatatagaaaatgtaCGTNCCAagtgattacg
aaaagttattCTTTCGACGATGGTAAGTTTTTTATTACGTCTATTAGGAC
GTCTTTTCAGATTCCTGTGAGAGTTACTTTAAGAAGGTCATTGACATGCG
AATGAGTTCAAGGATATTATCTAAGGCCCTCTTTATATCACGATCAATAG
G Run BLAST on NCBI transcript from alignment at sc0000430:197738..198854- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022666 ID=TCONS_00022666|Name=TCONS_00022666|organism=Clytia hemisphaerica|type=transcript|length=1117bp|location=Sequence derived from alignment at sc0000430:197738..198854- (Clytia hemisphaerica)
GAAACGCTGATGTTTGCCAGTTGAAGATTAAAATAATTTGAATATATTGC
TTTTTTCTTTCTAGATATTCCAAATGGACTTGCCGTATAATGGTACAGCT
ATCAAGTATCCCGGATCGAGAAGTCAACGCATCGTCATACTGCACATACA
ACATTAATTAGGAAAAGGTATTTCGTTCTCGAATGTTTCACCTGGTTTTA
TCGTCATCCTTTATACCATTTTAATATGTATCTTTTCTTCTAGTAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATTCGTTGCCTTTTATAGGGACCACTGGGTGAACC
GATAATCGAGATCGTTCTCAGGTAGACATGACTCTTAATTGTCAACTTGA
CTAAAGCACGACAGAAAAATCTTTTGTTCACCATCGAAGCGCGAAGAACT
ATGCACCCGATTGTATCCACGGAGATTATATATACAAATTCTTCTATTAC
ACCCCTATATCAGTGACCCGGTCAGCTCCACTCAATGATGAATTACCCGG
TGAAAGAAATTGCATAGAACCCAAATCAAAGATCTTATTTATGGTATTAC
CGTCTTACCCCGGTCAATTTCAGTTTTTTAAGAATTCTTGAATATTAGTT
GAAAGTCAATTTTTCCCTACCAGAGGAAGTTAAAGGTTATCACTTAGTGA
GCTTTGGAGATCCTATATTTTAAGACCCGGTGGGTTTCAAAACTTCACTG
GGTCACTGAGAAAGGGGTGTTCTATTATATATGAAATATAGAAAATGTAC
GTNCCAAGTGATTACGAAAAGTTATTCTTTCGACGATGGTAAGTTTTTTA
TTACGTCTATTAGGACGTCTTTTCAGATTCCTGTGAGAGTTACTTTAAGA
AGGTCATTGACATGCGAATGAGTTCAAGGATATTATCTAAGGCCCTCTTT
ATATCACGATCAATAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022666-exon-sc0000430-1575043694:198688..198854 | TCONS_00022666-exon-sc0000430-1575043694:198688..198854 | Clytia hemisphaerica | exon |
| TCONS_00022666-exon-sc0000430-1575043694:197738..198371 | TCONS_00022666-exon-sc0000430-1575043694:197738..198371 | Clytia hemisphaerica | exon |
| TCONS_00022666-exon-sc0000430-1510915933:198688..198854 | TCONS_00022666-exon-sc0000430-1510915933:198688..198854 | Clytia hemisphaerica | exon |
| TCONS_00022666-exon-sc0000430-1510915933:197738..198371 | TCONS_00022666-exon-sc0000430-1510915933:197738..198371 | Clytia hemisphaerica | exon |
| TCONS_00022666-exon-sc0000430-1491911889:198688..198854 | TCONS_00022666-exon-sc0000430-1491911889:198688..198854 | Clytia hemisphaerica | exon |
| TCONS_00022666-exon-sc0000430-1491911889:197738..198371 | TCONS_00022666-exon-sc0000430-1491911889:197738..198371 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000430 | supercontig | sc0000430:197738..198854 - |
Blast
The following BLAST results are available for this feature:
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