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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022642 ID=TCONS_00022642|Name=TCONS_00022642|organism=Clytia hemisphaerica|type=transcript|length=1977bp
CNGTGTAATTGGTATTTTCAACTACGATGGAGCTCAGGACACATACAAAG
AACTAATAAACCATGTTGAAAATGCTAAGAAATTATATTCTGATAAAGTG
CATGCCATATTAACACAAAAGAACACATCAAAAACAGCATCTCAAAAACA
AACGAAGCCAAAGGATGTTGGCATTAACATATCCAGTAATTCTTCTCCTT
CTCAAAGCTCTGAATCAAATCACCGCTCTCACCAGTCACCAAGGTTACAA
AACAATCATCACAATGAGGTTGAAATGTTGAGTCATCAGATACTGACTAA
ACTTTCGGAACCGTAGCGCTACCAAATGAAAATGACTGGTTATTATTGTG
AATGAAGTTTGATCGAATCGAATTGAAGTTGTACTAATTATAGAcctttt
attgcattttttgaAGTGCTGGGAAAGCTGTTCCTCTCATCTTCCTGGTA
GCAAAGAGAACGTATCTGGTGCGTATAATATCTGAATTTATGGATTGCTC
TCAATATTGTTTTCTTCTTATCTATCTTGGGAATTTGTGATAGAGTTGTC
AAagcatattttcaaaatgctATCGGACGAACTCATTTAGGTCGATGTTC
GTTAAGCCAATGATTGGGCTCTTTTTGGCTCGTCTCCTTCAATAAAAGCA
GGTAAATGGAATTTTTTGTATATTCTTCCAattaattttaaacttttatt
aaaattttgcctCATTTTTAACAcctattttattttgaatagaattttta
tattgaattttacttttcacgattttgccttattttttcATATAGTAtta
ttcaaaatcaattttgaattttttatttgtgTTTCAATTTTGTGTACGCA
GTAgatgtgttttgtttttatcttagtTGGGTCCTATTCATCTTGAATTA
ATGTCGTTGTAGATAAATGTTATAAACGATGAATGATAAATCCCTGAGTC
TAAAGTGGAACCATATACATTGCCAGGGTGTCtgcgggaccttgaaaacc
ttgaaactGGACTaagcaaccttgaaaaccttgaaagtgAATGTAATGTG
AAAGaattccttgaaaaccttgaaaaagctTGATTGTCACAGTATAGTTG
TCTTGTTTTGGCTTAGGTCCTCACTGAAGTTTTGGTCCATGCTAAAActc
caaaaaaatttcttgctcGCATCGCTCGCAATCATTTTTTATGGACCACT
ACTGGTAATAGTCTCTCACGCACCTCGTCAAGAACGGTGATATCGTACTA
TTTAAATCAATTTGACTTctaaaaaaccttgaaaattcgctaaaatattg
ccaaaaaaaacttgaaaaccttgaaaatggtgaaaaaaattccgtagaca
ccctgattccagtcttcataactcgaacctctataactggaATGTCTCCT
TAAAAGTGAAACCATATACCTACGTTGcagtcttcataactcgaatgtct
ccttaactcgaacaagttttgtggtcccttcagttaacaattttctttaa
accggtctccgtaactcgaaatttccataattcgaacaaatttcgtgcgt
gttcgagttataggccatttcactgtcgcaaagcgtaatcaggaccactg
cgcgctaatgacgacttactattggtccaaagttttgataaatctaATCA
ACCAGAAGTCGTTACTGTAGAGCGCAACctgtcctgattacccatgattt
aTTCTCGACTGTGAAATAACATAGTAAGACTCCACAGTAGTTAAAGccat
taaaaaaatcttaacaTTGGTACAAGATCATACGCCGTATGAATGCTGAA
TACTTGAAAATATGGTTCAAAATTACCAGtggtaaaatattaaaaaaata
tatggtGTTTGGTTTAAAGGAATGTTTACGAAAATTTAGATGTAGATATT
AtattaatttgttttttaagaatttgTAATTATATTGCCGTACTAGTAAA
TGTGTTTGAGTAACACTAAGAATATAC Run BLAST on NCBI transcript from alignment at sc0000429:234170..236541- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022642 ID=TCONS_00022642|Name=TCONS_00022642|organism=Clytia hemisphaerica|type=transcript|length=2372bp|location=Sequence derived from alignment at sc0000429:234170..236541- (Clytia hemisphaerica)
CNGTGTAATTGGTATTTTCAACTACGATGGAGCTCAGGTAATTGAATCTT
TATCCACTTATCCACAGCCAGTAAGTTCTTTTGTCTACATCGGCTTGTTT
TTTTTCTTCTAGATATAAATCTTTTAGATGTAAATTGTAAATGAAAGTTA
TTCATATATGCTAATTTAGTCGGTTCATTTTTAAAGTTCCACAAGCAAAC
TCAGAAAAACCTTGGGTCGATGGTCGATATAATGACTTTCCCAAAATATG
TGAACTGTTGACAGACTTTGGTTCAATTTTTTACTCGAAATGTTTTGTTT
TTTCTATACATTTGTGGGCAGACTAATATTTTTTCAAATTCTTTCAGTCT
GCATACCCCAATAAAGATGAAAAATAAACTTTCTTTTTCAGTTCTGCTCA
CCTTTTTTATTTCATCTTTTTTAATTTTACAGGACACATACAAAGAACTA
ATAAACCATGTTGAAAATGCTAAGAAATTATATTCTGATAAAGTGCATGC
CATATTAACACAAAAGAACACATCAAAAACAGCATCTCAAAAACAAACGA
AGCCAAAGGATGTTGGCATTAACATATCCAGTAATTCTTCTCCTTCTCAA
AGCTCTGAATCAAATCACCGCTCTCACCAGTCACCAAGGTTACAAAACAA
TCATCACAATGAGGTTGAAATGTTGAGTCATCAGATACTGACTAAACTTT
CGGAACCGTAGCGCTACCAAATGAAAATGACTGGTTATTATTGTGAATGA
AGTTTGATCGAATCGAATTGAAGTTGTACTAATTATAGACCTTTTATTGC
ATTTTTTGAAGTGCTGGGAAAGCTGTTCCTCTCATCTTCCTGGTAGCAAA
GAGAACGTATCTGGTGCGTATAATATCTGAATTTATGGATTGCTCTCAAT
ATTGTTTTCTTCTTATCTATCTTGGGAATTTGTGATAGAGTTGTCAAAGC
ATATTTTCAAAATGCTATCGGACGAACTCATTTAGGTCGATGTTCGTTAA
GCCAATGATTGGGCTCTTTTTGGCTCGTCTCCTTCAATAAAAGCAGGTAA
ATGGAATTTTTTGTATATTCTTCCAATTAATTTTAAACTTTTATTAAAAT
TTTGCCTCATTTTTAACACCTATTTTATTTTGAATAGAATTTTTATATTG
AATTTTACTTTTCACGATTTTGCCTTATTTTTTCATATAGTATTATTCAA
AATCAATTTTGAATTTTTTATTTGTGTTTCAATTTTGTGTACGCAGTAGA
TGTGTTTTGTTTTTATCTTAGTTGGGTCCTATTCATCTTGAATTAATGTC
GTTGTAGATAAATGTTATAAACGATGAATGATAAATCCCTGAGTCTAAAG
TGGAACCATATACATTGCCAGGGTGTCTGCGGGACCTTGAAAACCTTGAA
ACTGGACTAAGCAACCTTGAAAACCTTGAAAGTGAATGTAATGTGAAAGA
ATTCCTTGAAAACCTTGAAAAAGCTTGATTGTCACAGTATAGTTGTCTTG
TTTTGGCTTAGGTCCTCACTGAAGTTTTGGTCCATGCTAAAACTCCAAAA
AAATTTCTTGCTCGCATCGCTCGCAATCATTTTTTATGGACCACTACTGG
TAATAGTCTCTCACGCACCTCGTCAAGAACGGTGATATCGTACTATTTAA
ATCAATTTGACTTCTAAAAAACCTTGAAAATTCGCTAAAATATTGCCAAA
AAAAACTTGAAAACCTTGAAAATGGTGAAAAAAATTCCGTAGACACCCTG
ATTCCAGTCTTCATAACTCGAACCTCTATAACTGGAATGTCTCCTTAAAA
GTGAAACCATATACCTACGTTGCAGTCTTCATAACTCGAATGTCTCCTTA
ACTCGAACAAGTTTTGTGGTCCCTTCAGTTAACAATTTTCTTTAAACCGG
TCTCCGTAACTCGAAATTTCCATAATTCGAACAAATTTCGTGCGTGTTCG
AGTTATAGGCCATTTCACTGTCGCAAAGCGTAATCAGGACCACTGCGCGC
TAATGACGACTTACTATTGGTCCAAAGTTTTGATAAATCTAATCAACCAG
AAGTCGTTACTGTAGAGCGCAACCTGTCCTGATTACCCATGATTTATTCT
CGACTGTGAAATAACATAGTAAGACTCCACAGTAGTTAAAGCCATTAAAA
AAATCTTAACATTGGTACAAGATCATACGCCGTATGAATGCTGAATACTT
GAAAATATGGTTCAAAATTACCAGTGGTAAAATATTAAAAAAATATATGG
TGTTTGGTTTAAAGGAATGTTTACGAAAATTTAGATGTAGATATTATATT
AATTTGTTTTTTAAGAATTTGTAATTATATTGCCGTACTAGTAAATGTGT
TTGAGTAACACTAAGAATATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022642-exon-sc0000429-1575043694:236505..236541 | TCONS_00022642-exon-sc0000429-1575043694:236505..236541 | Clytia hemisphaerica | exon |
| TCONS_00022642-exon-sc0000429-1575043694:234170..236109 | TCONS_00022642-exon-sc0000429-1575043694:234170..236109 | Clytia hemisphaerica | exon |
| TCONS_00022642-exon-sc0000429-1510915933:236505..236541 | TCONS_00022642-exon-sc0000429-1510915933:236505..236541 | Clytia hemisphaerica | exon |
| TCONS_00022642-exon-sc0000429-1510915933:234170..236109 | TCONS_00022642-exon-sc0000429-1510915933:234170..236109 | Clytia hemisphaerica | exon |
| TCONS_00022642-exon-sc0000429-1491911889:236505..236541 | TCONS_00022642-exon-sc0000429-1491911889:236505..236541 | Clytia hemisphaerica | exon |
| TCONS_00022642-exon-sc0000429-1491911889:234170..236109 | TCONS_00022642-exon-sc0000429-1491911889:234170..236109 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000429 | supercontig | sc0000429:234170..236541 - |
Blast
The following BLAST results are available for this feature:
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