TCONS_00022193 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022193
Unique NameTCONS_00022193
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022193 ID=TCONS_00022193|Name=TCONS_00022193|organism=Clytia hemisphaerica|type=transcript|length=1277bp
GGTATTTTGCTTTGGCAAGCTTCTCCCGACTGGTGAAACTTCAAAAGAAT
TTCGAAAGAAGTTCTCAATACCATAATAATTACATCCTTGGAATTGTTCA
TAATTACACATCGACTTAAATATTAGAATGGCAGAAGATCCCAGAATTGA
CACCAGTCGTATTGATCCTAAACCACAAAGTATATCTGAAGCATACGCTG
TTCCtgcaaattttttagaaattgatGTGTGTAGTCCACAAACACATGGT
GTTGGTAAAAAAAGATATACAGATTATGAAGTACGAATGAAGaccAATAT
CCCGATATTCAAACAAAAAGAATCCAGTGTGCGTCGAAGATATAGCGATT
TCGAATGGGTGCGATCGGAGCTAGAACGGGATAGTAAAATTGTAGTCCCA
TCATTACCGGGTAAAGCGTTAAAGAAAATGTTACCGTTTCGCGCAGACGA
TGGTATTTTCGAGGACGAGTTCATTGAAGAACGAAGACAAGGCCTTGAAG
GGTTCATTAACAGAGTTGCTGGCCATCCATTGGCACAAAACGAACGTTGC
CTTCACATCTTTTTACAAGAAGCAATCATCGATAAAAATTACGTCCCTGG
TAAAATACGCAACGTGTAATCTACGCATGCGCAGTAGTAGGTTTTTATCA
CACAGTGAATCAATTCAAAACACACTCTTCTTCCTTTAAGTAGATATGTC
ATTTTTGTCTTTCTTTCCTACTCAATATAAAACTGTGTAGGTAAAAATCC
AAAagctttcactttcgttttacTGGTTGAAATCATGACAAAATGACTTT
TTCGAAGAATTTGTCTTTTTGGTACAAAAgcaagtcttttatgttttctt
tcatattattcgacgttgaaatcattttttttccaTATAGATCAAAAATC
AGTCATGAAAAAATGACTTATTAATTTAGTCCTTTCTGTTGTCCTTCATA
TATCCTGTTTTGAACCAGTAAAATACTGAGCATTGAAAGCTTTTGAGAGA
TCTACCTTTTTAAGTTATATCTTgtattgtaattttttataCATCAATGT
TATGGAAAATTGAATTTGTTTCTCCTCAAACTTGACATCTCAATGAACTT
ATACTAATTGACTGATGatgctgaattttttttaaatgatgaaaTGTAAA
ACACCCGAGGGTAATAAGGCGTATATAtatttgtaaaagatttctttttt
ttttgcggaATTTACTTTAATTGTAGAaataaatatttgataaaataaac
ATCAATACACTTCTTAATATAATCTAT
Run BLAST on NCBI

transcript from alignment at sc0000408:99931..111567+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022193 ID=TCONS_00022193|Name=TCONS_00022193|organism=Clytia hemisphaerica|type=transcript|length=11637bp|location=Sequence derived from alignment at sc0000408:99931..111567+ (Clytia hemisphaerica)
GGTATTTTGCTTTGGCAAGCTTCTCCCGACTGGTGAAACTTCAAAAGAAT
TTCGAAAGAAGTTCTCAATACCATAATAATTACATCCTTGGAATTGTTCA
TAATTACACATCGACTTAAATATTAGAATGGCAGAAGATCCCAGAATTGA
CACCAGTCGTATTGATCCTAAACCACAAAGTATATCTGAAGCATACGCTG
TTCCtgcaaattttttagaaattgatGTGTGTAGTCCACAAACACATGGT
GTTGGTAAAAAAAGATATACAGATTATGAAGTACGAATGAAGGTAAAATT
GTTTAATTCGATAAATTTCTAGAAATCTGGTTTTTTACCTCCTCCAACAA
TTAAGATCAATTGCGATCGATTGTGCTAATTTTCTGTTATGTATGATCGC
TACTCTGTctgtgtaccagagtgtatctcacaaTAATATCGTAGCGTact
ttaagagaagaaatttttgcggaatttaatttcgcggttcacagctcaaa
attctgAAGTTTCGAGGGAATTCAATTTCGCGGTTGAGGCCAAATACCAC
GACTCTCGACATGGCTcaagaattctcgggccaaaacttttattggaatg
cgCATAAAGCCGGAGGATGGCCCGAGCATGGCCCGAGTTTTCGGGTCGTG
GGCGGGCCTCACGCGAGCCACACGCGGGCTAACTTTTGAAATCATGATTT
AAAcccgcgtgtaatttcaggactgcattttttcaatattttctctagaa
aaacttgatttcactTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAATTATTAACGCATagccaa
aattctgcataattaatTTCACTCTAATTATTGCAGGTGATCAAGCCTTG
GACACAAGAAAAATTAGACaggaaagttttatttttgataaacttctttc
tttcaaaaacacaaattaAAGGGATCTTCGTCATCCTCCTCTGGCTCCTC
CAAATCAGCTAATGATTGTTAATACATTAGACAATCTATATGTAATATAT
ATTACACAAGCCTTTAACGCGTACTTAAAACACTTGAATATCATAATTAA
TTGTTCTCTAGTTTTTCACGCGTAGCgtcgaaaataattatttattgcca
agcgttaaattagaaaaaccacggTAGGGTTGCGTTTTTAGCGAATATAA
AGaaatcgatattaatcgataACAATCAAAAGCAATCAGCGATTAATTGA
TAGCaatcgataacaatcgaatCCAATCGATAAGAACGTAAAGTCTTAGT
ATCGTCACTATCGATaattatcgattaaaatcgattaatatcgattgATT
TCCCGTATCGATTTCATCGATTGGGTACGCCTGGTTTATAAGGGCGTACC
CTCTGAGACCTAaacttaggatcccgtagggatcgGGGATTTATCCTGGT
AGGGGCactggtagggttgggagctttcttgataaaggtctgtaaatttc
atgctataagtatttgtgaatgacagctttCTGCCGTGTCTTGTTGGCGC
AAGCAGCGTGATTAGGCATTGGGTATGttaaccaaggttgcttgcattcg
GTTGTTCCAGCTGGGGTTGGAGAACTatcgtgagattgggtaacttgcat
cagtggaggctaacatgcacaGTCAGGACCTCacttcactttatcgatat
tactcaaacggcagtgtgcgctaaattattttggtttcgctttcgatttc
aagagaaggtcttagcaacagggctgggtagaaaaatctaaacatagaat
tcaaaaaaaatattgatcatcgtatagagcaccaAAAAATatcccctttc
tatgtttagtttgctCTACCTtagattataactgaaaatatcttcaaata
acctttgtccgctatcagccgGCGCAGTAATCTTTGCCCGttccaattct
tagataatgaataagagaggtgcgcttagctaagccgtgctcgcgggtGA
TAACTTTATGTTTACttctcttgtatattttagtggtatttatccaatga
aaaggatattgacaaaatatgcacggcattgattatgacatcattaaatt
tGTCAGTGTCGATTCAATatatagttctttttatcgtgaaatttagaaat
acaaacaaaaaagaatcaaatttaatatttgtttcctatgtagattatat
tagcgttagaatacggtaaattttcacgaaaaatattgcgcgatggcggt
acgcccaatcgcgcccacaggaaagttccaatttttaattatcgggaaat
cagggaaaccggttcaccttGTGGATAAAAaagtacggaatgaaacctga
cagaaggttttcgactagatttattcagataaagctataagaggttcatt
acttgtggattttaaaacttacataagcaaaaacgaaagttgttgggaag
gaaagagtaaacacaagacagaaggtttggttgtattgatcaggtatgtt
tttattctatctgaACTAATATTGAGACCCTGACtgaacatgcatagccc
tcaaatgaaagacctggctggtcattaaaatacaaagttaaatcacatca
aaaatggtagagtagagctgcgagcggagctgcgtagttgttattttaat
gaccagccaggtcttttatttatttgggggctatgcatgttagcctccac
tgatggaAGTTACCGAATCACACGGTATTTCACGGGTacaggcaaatttc
agaaaaatacttagaaaacacttgagaaagtcagaaaatctggatagaag
ataggaaagtagaaaataggggggggaataagagaggatgcatcctcctg
gtggatgatatcgtttgccaattgttttagagataggaataatattaAGG
TTAGAATCACtgataaatttctttttcctcTCTGGACGCTAAGCAACAAA
ATATAGTTTCCATCAGCCATTCCAACCTTCCTgctattcctatctctaaa
aagAAGGGTGACTGGATGATTTTAAGAGGTATGTCAACATTTATTTAGAC
Caagttactcttaggtgccaaataaacggcccctcccgcttgttaatttt
tcaatttttttccaacccccccccccNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGCCAAGAATAATATGTCAATATTGTG
TTTTAGTTTAGTATTATTTATTGACCCTGACTGAAAATAAATAGAATAGG
ATAGAAAATTAGACAAAATACATCAAATAGTACGATAGCAGATCAATAAG
TTTATGTCTACAATTGTTCATTTgatgtcagttaggaacatttggcaagT
TCCCTTCAGCTTGGGAAATACTGTGTATTTCCATTTAAAGAAATGACATG
CAAGTCAGGGGTAATACATCGTTTAGTAGTGTCAACTGCGCAcgcgtcca
aacaattttccttaataaccccttacaaaaaaaaaaagtcaaaacgcaat
ttaccttacctcctgagtttgtttttgttatgctaaaatataacaaacct
ttgtcatgctgtctaattacaaaaacctccaatccCTACTTCTCTGCCAT
CTAGTTTTactttaaatgccgtgttttaaaattcctttgctacattatat
gtacggaaaaggttttctccaggttttttcaatcccgggattaaactacg
aggACAGTTCCGCCTGCTTATTTTCCTTTCCACGTTGAGCCCCGGGGCTA
CTTAACAATAAAGAGATTTTATTGATTAagagattaatgttgaaatgcGT
ATTTTTTCGATTAAATTAGGcaatactcaacaaaaaataaggtggtttta
aacaaatctttgacaagttggcgtttctttctgttctaatatatgcaaat
cacgttGAGAAAAGAAcatatttccgcctttactttcgctttcgtgttaG
GCGAATCTGATTGGattgattggatgaataccgctcgctaacaaattctg
attggctgtaagtctttagcttcgggattctgattggatcatttctTGCG
CCACGGTTGAACTTTGAatggttgaaagtttctgagcttgaattctgatt
ggatgaatacctgaaaagtaaacaatagtatgtaagtattttgcttatca
aaactGTAACTATGCCCGGGGcacccgttgctaagaccttattttaaaaa
cgaaagtgattaccgcaaaaattcatcaaaaatagcgattttcgtaatag
ctcaaatattgatacttgactgtactggtcttagcctggatatccaggct
gtaaactatttcacagcctagtcattctttttcttttcatatgCTTTTAT
ATGTAATAATGAACATTCATGTTTAAAGctacttaaatatatagatagat
atagATGCAGTTCGCTTGCTTgtgctcacttcgctaaagccgtaaagGCC
AATCTACACTACATGACGCAGAGAAATTCTGCAACAAAAATATGGTAACC
CTCTACttactaccgtcaactgctcttacttgggacgattggtcacaACA
TGGggctgttgatatctggcctgtattttcacttactgttaattTAACAg
taatctctttgacaacaaatttgttttgataactccaccaagtttatcaa
tcatactttctgtcatagcatttcacgataactttcactgatagcgcgcc
ctttttaacttttttgttttcattaaaaatgacTGGACGCCGATTGCAGA
ATTAGACAACGCCCACCGCTTAACTGCCTATCGctcgatgggattaacaa
ataacaactGTGTAACTTGTAACTTAAGGTAAAGCATCATCAAATCAGAa
aggattctttgaaaaatcacactcgcatcaaattcccgctttcgtTTTGA
GaactaaagataagaaaaaattcaatccTTAGAATCaacgattgaaacaa
ataaagttaTATGACAACTGGCCGAAAAGCCATTAGTGGCAAAAATTAGG
TTAACTTTCATTATACACGGCAATCTCAtcagtttaaaaaaactttctga
TGGAGCGAATTTTTAAtgcagatttcaatataaaaattGCGTGGGGAATA
CTTCTGTCAATCTGTTGTTAACtatgtaccgtaagttggtctattgtcta
catccctcttctaattccaaCATCCAGTtttagataggaataatagtaag
gtcggaatcactgatagacaaaagattttttcctctctggTGGCTAAGAA
AAGAAATATAGTTTCCATAAGCCATTTTGACCTTTcttttcctatctcta
aagaagggtgtcaggaTTACAAGAGGGATgccaacattagaccaagttac
ggtaagctttttattatattgttggaatagaaaagagaaaagaggtaCGT
CTAGCCTAGTCTAATTGTCAGCCGTCAGGATGAATGTGAATGAGCTTATT
cgtatcaaaaataaaacacaGGGAATTTCCCAAGCTGCCTGTAACCGgct
gcaatcaaaaaaatcataactgcACTCATAAAAACATACATTAGCGTCTT
TGTTTACCATTTTATGCCTTGACGATAGATGTCGATATGGTGCGCCAAAG
TGGAAATAAATACTAGTTTCAAATATAGCCCCTTTGCGGGGCTTTGACGT
TAATATACAGGCCAGTTAAACAAATTAATGAAAATCAGGTTATTTCttaa
aagatagtatcgttttatcAAAGATAATATCGTTtcaaaaaagatagtat
tgttttgaCAAAGATAGCACTgtcattttaaaaagatagtatttattttt
gGTTTGGTNCCCTTAGAATCaacgattgaaacaaataaagttaTATGACA
ACTTGCCGAAAAGCCATTAGTGGCAAAAATTAGGTTAACTTTCATTATAC
ACGGCAATCTcatcagtttaaaaaaaactttctgatgGAGCGAATTTTTA
AtgcagatttcaatataaaaattGCGTGGGGAATACTTCTGTCAATCTGT
TGTTAACtatgtaccgtaagttggtctattgtctacatccctcttctaat
tccaaCATCCAGTtttagataggaataatagtaaggtcggaatcactgat
agacaaaagattttttcctctctggTGGCTAAGAAAAGAAATATAGTTTC
CATAAGCCATTTTGACCTTTcttttcctatctctaaagaagggtgtcagg
aTTACAAGAGGGATgccgacattagaccaagttacggtaagctttttatt
atattgttggaatagaaaagagaaaagaggtaCGTCTAGCCTAGTCTAAT
TGTCAGCCGTCAGGATGAATGTGAATGAGCTTATTcgtatcaaaaataaa
acacaGGGAATTTCCCAAGCTGCCTGTAACCGgctgcaatcaaaaaaatc
ataactgcACTCATAAAAACATACATTAGCGTCTTTGTTTACCATTTTTT
GCCTTGACGATAGATGTCGATATGGTGCGCCAAAGTGGAAATAAATACTA
GTTTCAAATATAGCCCCTTTGTGGGGCTTTGACGTTAATATACAGGCCAG
TTAAACAAATTAATGAAAATCAGGTTATTGCttaaaagatagtatcgttt
caTCAAAGATAATATCGTTtcaaaaaagatagtattgttttgaCAAAGAT
AGCACTgtcattttaaaaagatagtatttatttttgGTTTGGTGTGCCAT
AtcatatgccgacatgagcgACCACAGAGCTTACAGTGGTCGAAATAAGC
TTTTTCATTGTGATTGGTTATTTTAGACCGTGTTTAGTGTCACCTGAAGA
GCAACCATGGTTCAGGCTGAGgggtagaaaattttgaaaatttgcccctc
atatttggcttaaaactgtttcattttgatgttatcaattatttaatttt
ttacttGCCTTCTGATGGCTGATCATATTGGGTGTTTTGTTACCACTCTC
GACGCAGCAGGCTACCGCaatttatcgatattttttgctgagtaaGGAGT
TTTTTAGCATATTTACCCATTTAAAACATGAATTATCTCGTGATCTAGAT
GCCgggaaatttaaattttttagttGCTTTATCGGACCCTGTTTCTTGTT
GGATAGTAAGGACTTGATGTCTTTGtcttgcttgattttattgacaaaTG
TTTTCttagtctgtacacagacccgatatctatggctaatttcaaaattc
attaccgtggagggtctgttgtcattgtcttttctcgtttgagatttttc
aaaccaagcgctgcgatggagtgctgtTGAGGTTTGGCAAAAAATGGAAG
GCGATAAGAGAAAATGGCCGTCAGAATTGTCAGAAAGTATAGAAGTTTgt
tgaaaaaaagtgtttcatAACAAAACTGGCTTCTTATGTTTTATTAATTG
GAATGGAAGAGAGCTCTAAATGAAGGcattctattgcaaaataactcttt
ttgcacaaatcgaatgttttttgtttacattttggatttttgagttCACG
AACGTGAGAAAGAAGTTGTTTGATTGGaatcttgtttttaaagtggtttt
aacttcagttctttgcAAAAGAATATACTCAAAGTATCTCTGTATGTTTT
TATGATCAAATTCAGTATTACTTTTACGGCATATAATCTATGTAGAGTGG
CTATAGTGTTTTTTTGGCATGGCTTTTGTAGAAAATGTTTATAATATAGG
GTAATGGGAAAATAATTTTCGTTGGACAATTTTGTCTTCGttacttttca
gcttttagtttggctcaaaaacattaaaaactaAAAAGCAGCCAAAACAT
GTTTAGAAAAGTGACCCTCAATCATGGACCCCACCCCTTTGTTTACAGTT
GTCGTAGCTTTGGCTgccatttttgttaaaattataCTTCATCGAAGAGG
TCTCCTTAcgggaaaatttttatcaaacagacaatgcgcacagaatGAAC
TACGCTatgataatcgtgagatacactctggtacagagtaatgTTTTCCA
GGCCAAAGGATTGTACTTTTCAGTAACTTATAGATGAAAGAAGAATAAAA
ACTCTTTTACATCAAGCATCATACCCACATATTACTCATGTGAAGCATCT
AAGCAAATCGAAAAGGTATAAAGATATGNCAAAACATGTTTAGAAAGTTG
ACCCTCAATCATGGACCCCACCCCTTTGTTTACAGTTGTCGTAGCTTTGG
CTgccatttttgttaaaattataCTTCATCGAAGAGGTCTCCTTAcggga
aaatttttatcaaacagacaatgcgcacagaatGAACTACGCTatgataa
tcgtgagatacactctggtacagagtaatgTTTTCCAGGCCAAAGGATTG
TACTTTTCAGTAACTTATAGATGAAAGAAGAATAAAAACTCTTTTACATC
AAGCATCATACCCACATATTACTCATGTGAAGCATCTAAGCAAATCGAAA
AGGTATAAAGATATGTCCACTCATTTCTActcatgttttttgttttcaga
ccAATATCCCGATATTCAAACAAAAAGAATCCAGTGTGCGTCGAAGATAT
AGCGATTTCGAATGGGTGCGATCGGAGCTAGAACGGGATAGTAAAGTAAG
TATTCTTTCATATTTGACGAATTAATTATCTTAAAAAGACGACTTCAACC
AGTGTATACCCGCgggtttatcgttctacatctgaaATGCGAGCTTTATT
AAGCTTGTTTGACGTCAAACGATACTTCACAATCATCAGCCGGTTTGAGA
GAAAAGATTAGTGAAGAGCGCCTATCGAAATTTCTTCCCAAACACCATAA
CACATCAAACTAGTGTTACACTTGCAGATGATATCCGTTCACGTCAGATA
CCAATAGAGTCACCCATCTTTCGTGGTAGACGGATTTCGGACAATAATTT
TAAACCAAAAACTTTCAATCATTTACGTCTAGATTCGTAAAACCTTTTTA
CAATACTGAAGATGTTCAATTATTGGTGTTTCTATTCATTCAATTCATTC
ATCTTGTTACAAAATCTTGTTtgtaaatctttttaaaattcttCTTGACA
GATTGTAGTCCCATCATTACCGGGTAAAGCGTTAAAGAAAATGTTACCGT
TTCGCGCAGACGATGGTAAGTATGACTTTTAATAGTATAGTTTTGTACGG
AAATCGATGAGTGCGATTAATCAGACGTCACGAATAAGGATCATACTACG
GTGTTTGTTCTTATCACACGCCTGAAACTGGGAAGTCTATGGTAAGATGA
CCAGAATCCTTCGAGAAaattgttttatcaaaaaatggAGTGGGTTTCAA
AAACAACCATAAAATCTTCGCAAACTACCTTTTTAAACAAACAGTAACCT
GTCACCTTTTCAGGTATTTTCGAGGACGAGTTCATTGAAGAACGAAGACA
AGGCCTTGAAGGGTTCATTAACAGGTAAGCAACCATACAGTAGACTATCC
ATAACTTGAATGACCAAGGAGTTCAATGTTTTACAGACACAAAATACCTA
TCGTTACGGTTAGAGGGTCAATTTGTAAAAGTGTCACTTACTATGACAAA
AATTCTATCTTCAAACTATCTTCAAACATAAGATTCTCTTTTTAACCCAA
ATGACTCTTGTTTAATTAACTGAAATGAATACCTGGTGGACTTTTggtca
aaatagatgaaattgGGAACTGAAATTAATTACGGCCTAATTCGATTGAT
TTACATTTAGCTTTTCTTTGCTTTCTGTCTCGTGTCTTACTTTGACTGAG
CATGCGTCACTGTGATGTTTTCACGTTTCAAACCTTGACCACATTGAAAC
AATTAACAATGATTATTAAGTATTGTTATTAAGTACTTTGACAATCATCA
GATATCTCGATTGAGACTTAAACCTTACGAAATCAATATTTAAGACTCGT
CTTAATtggcttttactttttttgtgaaTTACTTAGTGAATTTTTTcata
tctttttttaattttaatctcATGTATTTCATGTAATCGTTGCTATTCAT
TTCCGTTCATTATCAAGTCTTAATTGGATTTCTTCTCGTGCATGTTCTGT
TTTGAATAAATATAATTGTAAGGGTGATGCTGAAATGAGATCTCCTTATG
AAATCATTGAATTGATCActcttttaaaaaagatatttgagaACGGTTAT
CAACAATCTCCCAAttagtttttcaaacttatctTAGGTGAATAACACTT
TTTACTTTCATACAACGGAACATAtgtcttttcaatttttacatTATAGA
CGATCTTTCTAATTTTCTTGCAGAGTTGCTGGCCATCCATTGGCACAAAA
CGAACGTTGCCTTCACATCTTTTTACAAGAAGCAATCATCGATAAAAATT
ACGTCCCTGGTAAAATACGCAACGTGTAATCTACGCATGCGCAGTAGTAG
GTTTTTATCACACAGTGAATCAATTCAAAACACACTCTTCTTCCTTTAAG
TAGATATGTCATTTTTGTCTTTCTTTCCTACTCAATATAAAACTGTGTAG
GTAAAAATCCAAAagctttcactttcgttttacTGGTTGAAATCATGACA
AAATGACTTTTTCGAAGAATTTGTCTTTTTGGTACAAAAgcaagtctttt
atgttttctttcatattattcgacgttgaaatcattttttttccaTATAG
ATCAAAAATCAGTCATGAAAAAATGACTTATTAATTTAGTCCTTTCTGTT
GTCCTTCATATATCCTGTTTTGAACCAGTAAAATACTGAGCATTGAAAGC
TTTTGAGAGATCTACCTTTTTAAGTTATATCTTgtattgtaattttttat
aCATCAATGTTATGGAAAATTGAATTTGTTTCTCCTCAAACTTGACATCT
CAATGAACTTATACTAATTGACTGATGatgctgaattttttttaaatgat
gaaaTGTAAAACACCCGAGGGTAATAAGGCGTATATAtatttgtaaaaga
tttcttttttttttgcggaATTTACTTTAATTGTAGAaataaatatttga
taaaataaacATCAATACACTTCTTAATATAATCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012449XLOC_012449Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022193-exon-sc0000408-1491911889:99931..100222TCONS_00022193-exon-sc0000408-1491911889:99931..100222Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1510915933:99931..100222TCONS_00022193-exon-sc0000408-1510915933:99931..100222Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1575043694:99931..100222TCONS_00022193-exon-sc0000408-1575043694:99931..100222Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1491911889:109030..109125TCONS_00022193-exon-sc0000408-1491911889:109030..109125Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1510915933:109030..109125TCONS_00022193-exon-sc0000408-1510915933:109030..109125Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1575043694:109030..109125TCONS_00022193-exon-sc0000408-1575043694:109030..109125Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1491911889:109582..109645TCONS_00022193-exon-sc0000408-1491911889:109582..109645Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1510915933:109582..109645TCONS_00022193-exon-sc0000408-1510915933:109582..109645Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1575043694:109582..109645TCONS_00022193-exon-sc0000408-1575043694:109582..109645Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1491911889:109894..109954TCONS_00022193-exon-sc0000408-1491911889:109894..109954Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1510915933:109894..109954TCONS_00022193-exon-sc0000408-1510915933:109894..109954Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1575043694:109894..109954TCONS_00022193-exon-sc0000408-1575043694:109894..109954Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1491911889:110804..111567TCONS_00022193-exon-sc0000408-1491911889:110804..111567Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1510915933:110804..111567TCONS_00022193-exon-sc0000408-1510915933:110804..111567Clytia hemisphaericaexon
TCONS_00022193-exon-sc0000408-1575043694:110804..111567TCONS_00022193-exon-sc0000408-1575043694:110804..111567Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:99931..111567 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
135.201	148.834	194.17	205.84	1.03605	0	0	0.81432	138.29	112.099	123.692	122.858	107.928	112.937	110.276	116.931	105.889	108.336	77.088	76.7392	94.3093	86.4981	94.3599	90.4979	0	0	103.359	94.4187	97.7437	83.985
Blast
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BLAST of TCONS_00022193 vs. Swiss-Prot (Human)
Match: SNX12 (Sorting nexin-12 OS=Homo sapiens GN=SNX12 PE=1 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 1.124e-70
Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 2 
Query:  128 MAEDPRIDTSRIDPKPQSISEAYAVPANFLEIDVCSPQTHGVGKKRYTDYEVRMKTNIPIFKQKESSVRRRYSDFEWVRSELERDSKIVVPSLPGKALKKMLPFRAXXXXXXXXXXXXRRQGLEGFINRVAGHPLAQNERCLHIFLQEAIIDKNYVPGK 604
            M++    DT R++ KPQ +++AY  P+NFLEID+ +PQT GVG+ R+T YEVRM+TN+PIFK KES VRRRYSDFEW+++ELERDSKIVVP LPGKALK+ LPFR D+GIFE+ FIEERRQGLE FIN++AGHPLAQNERCLH+FLQE  ID+NYVPGK
Sbjct:    1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGK 159
The following BLAST results are available for this feature:
BLAST of TCONS_00022193 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX121.124e-7071.07Sorting nexin-12 OS=Homo sapiens GN=SNX12 PE=1 SV=... [more]
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