TCONS_00022122 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022122
Unique NameTCONS_00022122
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1736

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022122 ID=TCONS_00022122|Name=TCONS_00022122|organism=Clytia hemisphaerica|type=transcript|length=1736bp
aaaatgtaggCATATTTAGTATAAAACTTCCAATTCTTTGCCATGGCTTC
TGAAGAACAACTAGAAGAGCTTGAGGCTATTCAAGCAATCTTTATGGATG
AGTACAAAGATCACTCTAAGaaaaattgcTCTCCTGAGTTTACAATTCAA
TTGGTTCCGTTGCAAAGCACAATAGCCAAAGATGTACATGCAAGACTTGG
TTTGAGAGTTAAATTCACCACCACATACCCTAACGACCCACCCATCTTTA
GCTTTGAAGATACAAAAGGTCTTTCTGATGAAGATTTAAAATCATTGAAG
AAAGAGATTATGACACAGGCTGAAGAGTTGTGTGGAGAGGTCATGATCCT
TCAACTGACACATCACATTCAAGAGTTCCTGTACCGCCACAACAAGCCAT
CGTTATCGTTCTTTGAACAAATGGTACAAAACCAAATGAAACAGGAGGAG
TTACAAAATTTGGAACAACAAAAAATAGAAGCAGAAAGAGTTGCGCAAGA
TAGAGAACAAGATGAAAACGTTATTCGTCAGGTTGAGGAAGAATTAAAGA
AGCGAACTGAAGTCAAACGAAAACGTCAGGTCTCTCAATGTCAGCAGTCT
TCACCACAACAAAGCTCCTTATTCGTCAACAAGGTAGAGACCATCCCACG
CAAGCTACCCTTCAAATGTTCACAAGATAGACAGAAATTCTTCGTGTACC
AGTTCAAAGATGGCAATAAGAAAGTCTTTTGTAGCTCATGCATAGgTCAC
TTCTACGTCGGCGCATGCACCGTTCTCGCTATCGATGAAAGTGATGGCAA
CAAACTTTCTCTCACTGAATGGAAATGGAAATCTCAACAAAGTGCTCATC
ATCAACAACAGAAAAAGAAAGTTCATTTCACATCATCAAGTGGTAGTTCT
GGTGGGGAGAAACAAATTGATGACCAGGCTAAACAGatTCAAAGCATCAC
CCAAGAATTCAATTATCTGAAAAGTAAAGTGAACTATGGAGGTTTGATCA
ATTACCACGCGCTCGATTTTGATCATAGTGCTACCAATATTTCTGCAAAG
CTTTTATCAGACAGTATTACCGGTCTATGCTTGGCATCGTATCTGCAAGA
AGACGGATTGCCCTTATCGTTGTTACATCATATTTGTCGACAGATCGTGG
ACGGGCTTTATTTCTTACACTCCAAGTCAGTCGTTCATCATAACTTAAAC
CTTGAAACCACTTTCATCAACGAGCAAAACGAAGTCACATTAAGCGGTTA
TGCGATGGTGAGAAGGATATGTGATTTGTGTATATCCCCCTCATCTTCTT
CCTCTTTCAATGACAAAACAGAAGAGGAAGAACAGAATGGTGGGCGTGGC
AAGTTGTTGTTTCGCCAAGACATGAAAGCTGGGAAGAAAGGAGATATTTA
TAATATGggTTTGATTGCACTTTCCTTGTATCAAGGACATTCTCTTATCC
AATTACCAATCGACTTTCCAGAAGATCTACCCGATGCTCTTCTCTCCTTC
TTAAAAAGttgttTGGATGTTGAGGAAGACAAACGATCAACTGCAGCGCA
ACTTCTTCAACATGCATTCATCTGCGATAAAATCATCGACAACCCGAAAA
CGAAACATACTCAACAAAACAATGGTGCTTCGAAAAACGACCATTCTGAG
AGTAACNCTCCTGGTGTGAAATGTCTGCAGATATTGATAGGCAAGAAACA
TCATCATCAGGAAGCGAGTCAGACTCAGACGAAGAT
Run BLAST on NCBI

transcript from alignment at sc0000405:116586..126820-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022122 ID=TCONS_00022122|Name=TCONS_00022122|organism=Clytia hemisphaerica|type=transcript|length=10235bp|location=Sequence derived from alignment at sc0000405:116586..126820- (Clytia hemisphaerica)
AAAATGTAGGCATATTTAGTATAAAACTTCCAATTCTTTGCCATGGCTTC
TGAAGAACAACTAGAAGAGCTTGAGGCTATTCAAGCAATCTTTATGGATG
AGTACAAAGATCACTCTAAGGTATGTTTAGTTTCTGTTATTGGGCTCTTC
CAGAAAATGCCAGTACATGGGGGGTGGAGTATATATTGTCCGGAGGATAG
CAAAAAATCATCAAAATTTGCCTTGTCCGGGGGGTAAATCACTGAAAAAT
GTTATATCCTCCACCTCCTATATTCAAATTTTTTCTGGGAAAGCCCATTG
TAGGAAATAATTTTTTTACTTAATTTTCACAGATCAATAAACTTTGGCTC
TTTTAAAGTCTGTCTCAATATAATTTGCAGCTGAGATAATTAAAGGTTTT
AACCTTCGATAGAATTAGAATTGGATAGCGGTTTTGTGCTTGTTGAAAAG
ATAAACAGGAGTGGAACATTATTCAAAATAAGAAAATTCAAAACAAAGAT
CTGAAAATGAAGATTGAAAATGAAGAAGAAAAAAATCAATTTCTTCAATA
ACTGTGCTATGATTATCATTTTTCCCACACATAATTCTGTAATTCTAGAA
GATCATCTACATGAAAACATTTTGAAAATGATTAATCCAATCGAAAGATA
CAGACCAAAGTTTACCATCAAAAAACAGCAAGATTCTACAAGAAGTTGAT
TTTCTTCTTCATTTTCTCTTCTTTTTTTTTCTATCAAAAATCCTATCAAA
GGTTCTCTTAGCCTTTCTCGTCTCCGCTGCAGATTATATTGAGACAGACT
TCAGTTTCTTTTCCAACTTCTACAATGTATTATTATTAGTTTCTATTGCA
CTTTCTGCAACAAATCATCAAAAATAACCTTAACAACCTAATCCTGACTT
CTATTTTCTTAGAAAAATTGCTCTCCTGAGTTTACAATTCAATTGGTTCC
GTTGCAAAGCACAATAGCCAAAGATGTACATGCAAGACTTGGTTTGAGAG
TTAAATTCACCACCACATACCCTAACGAGTAAGCATTGTGGTTCCCTTTT
ATTTCATTTTTTGCAATACCAATCAACAAAACCTACTGATTTAACAAGAG
CATGAAAGATGTCCGGAAAGATTGTAACAGTAACATGTGGTCAAGCTCGC
ACTGTTTTGACTTGCAACAGCAAGGAAGACGTAGAGAGTGGCCAAACAAT
TTTTCTTAAACACAGTAAATCTCTACACTAATTTATGTCAGAGACCTACT
AAAATTGAGACTTCGTTTTTCTTCTTCTAGCCCACCCATCTTTAGCTTTG
AAGATACAAAAGGTCTTTCTGATGAAGATTTAAAATCATTGAAGAAAGAG
ATTATGACACAGGCTGAAGAGTTGTGTGGAGAGGTAAAAAGTGTTTCATC
AAAAATAATTTTTATCATTCCTTCAATTTTTAAAGATAATCTAACTTGTA
TTTAGCTTGTATGATTTGCTTTTTAGCTGACGTCAGTATGCTTACAACGT
TTACAACAAACCTTAGAAGGTTGCTTGAAATAGCAATCGATTTCAATTCA
ACCTTAAGAGTGAAAATTTTTTTGTCTTGCTTTAGCAGCCCAAACCCAGT
AATGAGCTATTTTAAAGACTGATTAAAGAAAGGGATAGAATGTTTATTCT
CTTAAATTTTTTCACCTTGGATTTATTTGCGGGAGGTTACAGTGCTAGAT
CTTGTATGCTTTCACTCGGCAACTGTTAATTTTGATTTGCTTTTGTTCAT
GATATAATATCTTTAACTATACAGGTCATGATCCTTCAACTGACACATCA
CATTCAAGAGTTCCTGTACCGCCACAACAAGCCATCGTTATCGTTCTTTG
AACAAATGGTACAAAACCAAATGAAACAGGAGGAGTTACAAAATTTGGAA
CAACAAAAAATAGAAGCAGAAAGAGTTGCGCAAGATAGAGAACAAGATGA
AAACGTTGTAAGATACACTCTTTTTTATTATTGTGCTTGAATGATAATCT
ATTTAGGATCAGTAATTTCAAACCATGTTTTGGGTTTTTCATTTATAAGG
TAGAAAAAGTGGCAATCTAGTTTAATCACCATTAGAAGCAGTGCCTACCT
TATTATCCATATTAGGGAGGGGGTGGACGAACATGTTCAGGTCAAAAAAT
CTCTTGAAAATGTCCAGATACTCCTGCAACAAACCCTGGAATAAAGACCT
CTTTGCATAATTGCACAAATTGCATAGTTTGTATCCATTCCCCCTTTTTA
ATAGGGGGATACCCTCGCCTTTGTAGGTGGTACCAAGATTAGCCACAGTC
TGTTTTAAAGTAGAAATATGTACCACCAAAGCACAAAATTGTGCATCATG
CTAATAAAAACGCTAGTTTTATTGTTATATTGTGATATTGTTTGCTTCTG
ACTGTGTACATTTTGTACTCTTTCATCACTTCGGTGTTGCATAGAGCCAG
TTTCCTTTGAAACAGATTTTCTCTAAAAAAGGGGGTATAATTGTATACTT
AATGCTGACTTATGTTAAGCAGAGCTGTATTATTAATGGTTGGGAATTTA
TACAGACCTTTTTTATTTTAATTAATTGTATAAACAATGAAAATGATATT
AGTCAGCATAACAATGAATCACATTATATTCATTTCCATTTGTATATTTT
CATGCCTACATTATTCTGTATAATGGCCCCAAGCTTTAAACATGTAGTCT
TTCATTTTGTATTTTAGATTCGTCAGGTTGAGGAAGAATTAAAGAAGCGA
ACTGAAGTCAAACGAAAACGTCAGGTATACTGAAAAATTATGATTATAAT
TTTTTATATTTATTATTTTTATTATATTTGAGACTTCGATTTTTATGTTT
TTTATTTTTTCTTCCTACAAGTGGAGTCGCCATAGTTCGAATGTCTCCTT
AACTCGAACAAGTTTTCAGTTCCCTTAAGTTAATGTCGCATAAATCTTTC
TCCATTACTCGAAATTCTCTTAACTCGAACACATTTGCGTTCCCTGTGTG
CTTGTTCGAGTTATAGAGACTCAACTGTTGTCTTGTTGGTTGTCTACCTT
AAAACTCTTGATATGCAAATAAACTAAAAGCATTAAATAAAACCGATCTC
TAAAAGAAGCCATATCTGCCATCTTTGGTTTTTTTTTTTAATTGGTACCC
GCAAAGAAGCTATTGCAGTGTTAAAATTTTGCCCAACGGCAAATGGCGCT
ACATCACAAGTAGGCAAGCAAAAGTAGTACTAGCGGATACCACTTTAAAA
AACTCCGATCAGAGTATTCTGCTTGGCCAAGATTGAGAAACAGCCTTCAC
ATTCTATATAAAGCTCAATGGGGGACTTTGAATCTTTTTTCCATTATTTC
AAAATATTATGGTAATAATTGTTATGAAATGTTCGTGTCAATGTAGATTT
CACAGACTGGAGTCGTTTATAATGAATGTAATACAATGTAATGCAAGTGT
GTTATAATGATAATACGATAATTTTTACGGGATAATGTGCAATTTGTTCC
TTCCATTATTTCTTGTTCATTTTCTACTATGTCTGAATTAGTCGTCTAGT
ATTACAAACAGCAAGTTTCACTATTTCATACATTTCTCACCAGGTCTCTC
AATGTCAGCAGTCTTCACCACAACAAAGCTCCTTATTCGTCAACAAGGTA
GAGACCATCCCACGCAAGCTACCCTTCAAATGTTCACAAGATAGACAGAA
ATTCTTCGTGTACCAGTTCAAAGATGGCAATAAGAAAGTCTTTTGTAGCT
CATGCATAGGTAAGGATAGCCTCGAGATCTATGCTATGATTTCTTCTTTT
ATTAACTGATGGCAAAATGAATAGCATAGTTTGGGCTATCAGTTTGAATT
TCCAAGCATCAAATAGCATTTGAAAACACAGTCGATCAATTTTGTTATTC
TTTCACTTTCACACGCTTTCTTAGAAAAAAAATGCAAGGTTCTAAACTTA
TTTATTTAATTTTAGTAAGTGAGGACAGCGCTAAATTTGAATGGGCTTTT
CCAGAAATAGTCCGTGTCCCCCCCTGTTGAGGAGCGGAGCGGATATCTAG
GGGGTAAAGTGTCTTTTCAAGTAAAAAATACGATATCCAGGGGTAAGCAT
TTTTATAAGAGAGGATATCCAGAAATCTTTACTAATAAAGTAAGATATCC
AAAGGGTTCGATACTTAAAAAAATCAATATCCTCAACAGTGGGGGTATTT
TCTTTTTCTGGAAAAGCCCAATCTCCTACTGTAATTTTTTTTGGGTCGAA
AACTTCCTCACAGGTCGAACCCGTCCAATATACATCAGATTATAAAAATA
CAGGATGGGATTCCTCTCCTAGGTAAGCAGGGAAGGCTTCTATCAGAGAT
ATCTTAAAACACTATATAAGGAATTTCAGTCAATTTCTTCCATCACACGA
TGTACACGTTTTTTTATAAGAACGTAAGGCTTCGCTGGCCAAAATGTTAA
GAAAAATTTCTTAGGAAAATGGACAAAATTACATTAAAAATGGGGAAAAT
GGTAAGAGCATTTTTAGGCTTGAAACTCAAAAAGTTAAGAATATCTATAA
GGCTTCAAAAATTTTGGATGTTCCTACAGTTACTTTTTTGTGGTTATAAA
CAATAAAGAAATACAATAATGGGGTTAAAATGTGAATTTTCTAAGAAAAA
AGTCGTTCGGGTGTCAAAAAAGATTGACGAGTTTTAAAAAGCTCGTATTA
CACTGTAAAAGAGAATCAAAAACAAATTGATGGAACTTTGTTTGCTTGTC
GAAAGCTATCAATTTTGTGACGTGTAGGAGGGTTCCTTTCTTTCGTTGGC
ATAGCCTGGAGTAAGAGATTGTACTTATTAAGTTGGTGAAATATTTAGTT
TAGTAAGTAGTCAAATTGATTTTAAAACGAAGGAATACTTCAGATTTTTT
TTTGAGCTAATGAGCACTAGGGTGTATTAAAGATGTTCTGATTTGCATTT
GACGAATTTGTTAGTTGAGGAATTTTGCAGGAATAATGCAGTGTTCTCGA
TGTCCAAGACTTATAATTATACTCTCAGATTTGATCTTTTCTCAAGAGTT
AATACTGGTATCCTATTGGCTATCCACAACTTATTAATCTCCATGCGTAG
AAGAAAACACACTCTAGGAATGACTGCCATTAATGCTCTTTGTCCTCTGA
TTTTTATAACAAGAACCTGTAAGAACGAGAGTGCCTACCTCTTTATTTAC
GTTACTCCTAGTGACTGCAAGTGAGCGAATTTTTAAACGAGTGTTTCAAC
CATAATGCGTACATTATAGCATAGTTTCTTATTTTGGTTACACTGTATTA
CTCGTGAGCAGGCTACAGGCTCATAGCTGTTATACTTATAGCATGTTATA
GCTTGACTCAATAAGTCAATAAGTTTATGCTATTAGAAAGCAGTCTAGGT
TTGTTACACGCTTGGAACAAGATTTTCCCACTACGATTTTCTGGAGTTTT
GGTTGTAATAAACGTCATCTTCTGAATATAGTGAGGATTTTAAGATAGGA
GGGCGAGAAAGGGCCTACTTCGTAACATTAAAAAAGAACGACAAATTTAA
AAAAGAACGACAAATTTTACAATCCACAACTCCGACTGAAAGTGACTGTA
CCACCCCTACGTATTCATTCCTTTATGTGATTTGCGAATAATAACGACTA
CAGTTTATAAATACGCATGCGTTTTAACTTTATTTGAAAATGAAACAATA
GATGCGAAGTAAACACTTTCTCTATGTGATTTTCAAGTTTGTGTAGGTCT
TTGGTAGGTATTGTACAATTTTTATTAGGTGTTCCCTACAACGACGGTGT
CACGAGAAAAATTTAACAAGAAGCCGAACCGGTATGAAGGCCCAGTGACA
GATCAATAGTCAAATGTTTGTATGCAATGGTATAAAGCGCCGTTTCTTCC
AAAATGAACTTGAATTGAAACGCGCTGCTTTTTCATACAAACAGTACCAC
GAAAAGCAACATGCTAATGAAAAGCTCTCTGGGCCAATTACAAATCCATT
ACTTCGAGGTTTTTCGGAATAAGATTCTTTTAGAATGGTTAGCTTATAAA
TGTACTTAGCATTCAATTATCGAAATTAACTTAGCAACGAAACAAAGAAG
TTGTGGAAGTTAGATCAGGGGACCCTTGCGTTTGGAAACGGACGCCCTAT
CGGCCATGTATTGCTTCCACGATACGTTGATAACCTGAAGATTTTATTTT
TCAAAATCAATAGGTCACTTCTACGTCGGCGCATGCACCGTTCTCGCTAT
CGATGAAAGTGATGGCAACAAACTTTCTCTCACTGAATGGAAATGGAAAT
CTCAACAAAGTGCTCATCATCAACAACAGAAAAAGAAAGTTCATTTCACA
TCATCAAGTGGTAGTTCTGGTGGGGAGAAACAAATTGATGACCAGGCTAA
ACAGGTACCATATTGGAGCTAATTTTCGCGGGAACTAATATTCGCGGTCG
AAAAAAAAATCGGCAACGTTGCATTTCGCGGGTTTTAATTTTCGTGGTTT
TGCCCTTTTTGGACAGATTTCTTTCATTTTCCTAGGGATTTTTCAAATTT
TTTCGATAAAATTGGAAAAAATTGTATTTCGCGGGCTTAAATTTTCGCGG
TTTTGCCAAAGAACCGTGAAAAACGCTAAAATTAATTCCCACGAAAATTA
GTTCCAATAAGGTATTTATAACTTACAAAGGGCTCATAAAGTTTTGCCGT
CTCAAACAGATTACCGTCTCAGCGAAGTTTAAAAAGAAGCTTTTCCGTTT
CCAAATTCAATAAAATTCTGCAAAATTGAAGAAACTTGCCTAATCTTTAT
TTTAAAGTCCAGTTCCGTCTGAGAGGAAAAATTTGCTTTGACTACTGTTA
TAATTTACGAAGTGTTCAAATCTCCCTTGGTTAAACAACTTACTTTTAAT
CATCAGCCCTTTTACTTTTGTTTGATCTGACATTTTGATTTTTCAGATTC
AAAGCATCACCCAAGAATTCAATTATCTGAAAAGTAAAGTGAACTATGGA
GGTTTGATCAATTACCACGCGCTCGATTTTGATCATAGTGCTACCAATAT
TTCTGCAAAGGTGAAGTTTTTAGTTTTGCACGCTTTTTTTATAAGAACAC
GAGGCTCGCTTTGGTCGAAACCTAAGAACAAATTAAGAATAAGCCCAGCT
TCAGATCTCAGAAATGGCTAAGCAAATGCTGGTTTTAAGTCTCTTTAAAG
TCATCAAGAACATTTTAAGAACATTCACCTGGGAATCACGAAAAATAAGC
CTCAACTAAAATTTGTCTTTGCCTTGATTCATCCGTGAGGTGATAAATGC
TGTGTATTACGCTGTGTATTATATCTGAACTGGTTGTTCAAAAAACGTGT
ATGAATTGTACTTTAAAAGATTTCAGTATACCTTTCATGAATTGTGTATC
GTTTTTTTTTTTGCTTTGCTTTTATCACCCCTACTCCTTTTCTTAGATAT
TATGCATAGACGATTGAATTATTGACTGATAATTATGGTCAGCGCATAAT
ACACAGCCAGTCAGCCAGCCAGCGTATTTTTTTCCTTGAAATTCTTGATT
CCCGAAAACCTCAGAAAAGAATTGAATTTGAAAAAGAATTTGTTTTATAC
TCCTAAATAGTTTTATTCATTCTTCCAATCGTACAGCTTTTATCAGACAG
TATTACCGGTCTATGCTTGGCATCGTATCTGCAAGAAGACGGATTGCCCT
TATCGTTGTTACATCATATTTGTCGACAGATCGTGGAGGGGNGATCAGTG
CATAATACACAGCCAGTCAGCCAGCCAGCGTAATTTTTTCCTTGAAATTC
TTGATTCCCGAAAACCTCAGAAAAGAATTGAATTTGAAAAATAATTTATT
TTATACTCTTAAATAGTTTTATTCATTCTTCCAATCGTACAGCTTTTATC
AGACAGTATTACCGGTCTATGCTTGGCATCGTATCTGCAAGAAGACGGAT
TGCCATTATCGTTGTTACATCATATTTGTCGACAGATCGTGGACGGGCTT
TATTTCTTACACTCCAAGTCAGTCGTTCATCATAACTTAAACGTATGTCT
GCTTGTTTTATCAGGATTTTCTTTTTTAGAGATCTTGTATGTGAGAAAAG
TCAGAATGTCTTTGAAGTGTAATCAGCATTTTTTTAGTATTTTAGTTCTA
TTGTTTATGAAATGTTCATGAAGCTTTGTTTGCCAAAAATATGACATTAT
CGAGATGATTAAATGATATCACTTCATAATCTCAAATTTTCAAATATTTT
TATGATTTCAAATGTGCGTACACACCCAAAGGAAAAGTGGCAGTTTCGAC
GTTTTTTTATTACGAGGAGGAAGGGAGGGTAAATAACATGGAATGGGTCG
GGAATTTACTTGTTTATCATAATTTTAGTCCATGATTCCCTTTCCAAGTC
TAATTTAAATCTCATCTGCATGTGCTTTTCTCCCTATAACATCTTAGCTT
GAAACCACTTTCATCAACGAGCAAAACGAAGTCACATTAAGCGGTTATGC
GATGGTGAGAAGGATATGTGATTTGTGTATATCCCCCTCATCTTCTTCCT
CTTTCAATGACAAAACAGAAGAGGAAGAACAGAATGGTGGGCGTGGCAAG
TTGTTGTTTCGCCAAGACATGAAAGCTGGGAAGAAAGGAGATATTTATAA
TATGGTAAGAAGATTTTTCCAAGGGAAATTTTCCTGCCGTTTTCAAATTT
TGTTCAGTTGTAGGAACAGCAAAATCTCTTAAAGTGGTCACTCGTTAAAA
ATAAAAACAAAATTTCCACATATATTCTTTCTTCTACATTAGACTAGCAC
TGCTACTCGCATGACATTTTTAACACTCCCCAAAGGTTATGGCGAATTAA
CTCTCTTTTTCCAACTTAAAATGTCACGACTTCAGCGACAAAAGTTTTCC
TAAGCAGCCAATTTATGAATGATCAATCAAAACTTGTCAAACATTCTTGA
CTGTGAAATAAAATTCAATCAGTCTATAATAGTCTATTAGGTTTATTTCA
AAGGGGGAAGAGTATATTGGAGTCATTTATAATGCGTGTAATACAGTAGT
ATAGGCGTAATATGATAATACGATTATTCGATTATTGTCACGGGATATAG
TTTGTATATAAACTAAAATTTGTTCCCTCCATTACTTTTTGCTTTATTTA
TACTATGTCTGAATTAGTCGCCCATCTTGCTAGACTAGGGGAATAGAGAG
AATATCAAATTTTTTTTAGGGTTTGATTGCACTTTCCTTGTATCAAGGAC
ATTCTCTTATCCAATTACCAATCGACTTTCCAGAAGATCTACCCGATGCT
CTTCTCTCCTTCTTAAAAAGGTTTGTTTTCATCGATCTTTTAACGCCTTA
GTGCAAAATAGTTTCCTTCCCAGTTGGTGTAAAAAAATTAGATTTGAATT
TTGGTTGCGGTATAAAATTTTGGGTAAATGTTTTGGTCGGAGATAAAAAA
AATCGGGTACAAGTTTTGGTTGGGTGATAAAATGTCGGGGAAATATTTCG
CCGGGGAAAAATTTCGTCACCCCCTCAAAATTTTCGTCACTTTCTCCCGA
CATTTTTTCCCCGATAATGTAATGTGCTAATCTTTTTGTGTAAAATCCAT
TTTCCGTCTCAGACGAAAAACCTCGCTCTGACCACTGTTTTACGTTTTTT
ATTTCAAGTTGTTTGGATGTTGAGGAAGACAAACGATCAACTGCAGCGCA
ACTTCTTCAACATGCATTCATCTGCGATAAAATCATCGACAACCCGAAAA
CGAAACATACTCAACAAAACAATGGTGCTTCGAAAAACGACCATTCTGAG
AGTAACNCTCCTGGTGTGAAATGTCTGCAGATATTGATAGGTACAAAATT
ATTAATATTTCTTTAGGCTTTGCAGGTACCAGAGATGCTAATTATTGTTT
TAATTCCCAATACTATACATATGGTGAGCCTGAAAACAAATTTTCCGGAT
TTTTTTGAATAATTTTTTTCCTTCTCAACTTAAAAGTACAGCAATTTTTC
TCGATTTAAAGGCATAATTTTCATTTTATATTCAAAGGTATTTTCTTCAA
TATCAAGGCCTTTTCAAATTAAAAATGGTAAAAAGAACTGCCGAAAAATA
AGCGACCAAGACTCAGCCAAGATTAAGACGTTCTAATAAGAAAGTGTACA
AATGCCTTGAAACTCTCTTTTGTTTTCTCTCACTCAAAGGCAAGAAACAT
CATCATCAGGAAGCGAGTCAGACTCAGACGAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012404XLOC_012404Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022122-exon-sc0000405-1575043694:126701..126820TCONS_00022122-exon-sc0000405-1575043694:126701..126820Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:125793..125908TCONS_00022122-exon-sc0000405-1575043694:125793..125908Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:125438..125540TCONS_00022122-exon-sc0000405-1575043694:125438..125540Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:124864..125046TCONS_00022122-exon-sc0000405-1575043694:124864..125046Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:124047..124103TCONS_00022122-exon-sc0000405-1575043694:124047..124103Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:123062..123227TCONS_00022122-exon-sc0000405-1575043694:123062..123227Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:120417..120607TCONS_00022122-exon-sc0000405-1575043694:120417..120607Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:119761..119874TCONS_00022122-exon-sc0000405-1575043694:119761..119874Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:119109..119184TCONS_00022122-exon-sc0000405-1575043694:119109..119184Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:118779..118852TCONS_00022122-exon-sc0000405-1575043694:118779..118852Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:118167..118373TCONS_00022122-exon-sc0000405-1575043694:118167..118373Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:117501..117601TCONS_00022122-exon-sc0000405-1575043694:117501..117601Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:116981..117162TCONS_00022122-exon-sc0000405-1575043694:116981..117162Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1575043694:116586..116631TCONS_00022122-exon-sc0000405-1575043694:116586..116631Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:126701..126820TCONS_00022122-exon-sc0000405-1510915933:126701..126820Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:125793..125908TCONS_00022122-exon-sc0000405-1510915933:125793..125908Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:125438..125540TCONS_00022122-exon-sc0000405-1510915933:125438..125540Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:124864..125046TCONS_00022122-exon-sc0000405-1510915933:124864..125046Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:124047..124103TCONS_00022122-exon-sc0000405-1510915933:124047..124103Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:123062..123227TCONS_00022122-exon-sc0000405-1510915933:123062..123227Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:120417..120607TCONS_00022122-exon-sc0000405-1510915933:120417..120607Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:119761..119874TCONS_00022122-exon-sc0000405-1510915933:119761..119874Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:119109..119184TCONS_00022122-exon-sc0000405-1510915933:119109..119184Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:118779..118852TCONS_00022122-exon-sc0000405-1510915933:118779..118852Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:118167..118373TCONS_00022122-exon-sc0000405-1510915933:118167..118373Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:117501..117601TCONS_00022122-exon-sc0000405-1510915933:117501..117601Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:116981..117162TCONS_00022122-exon-sc0000405-1510915933:116981..117162Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1510915933:116586..116631TCONS_00022122-exon-sc0000405-1510915933:116586..116631Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:126701..126820TCONS_00022122-exon-sc0000405-1491911889:126701..126820Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:125793..125908TCONS_00022122-exon-sc0000405-1491911889:125793..125908Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:125438..125540TCONS_00022122-exon-sc0000405-1491911889:125438..125540Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:124864..125046TCONS_00022122-exon-sc0000405-1491911889:124864..125046Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:124047..124103TCONS_00022122-exon-sc0000405-1491911889:124047..124103Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:123062..123227TCONS_00022122-exon-sc0000405-1491911889:123062..123227Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:120417..120607TCONS_00022122-exon-sc0000405-1491911889:120417..120607Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:119761..119874TCONS_00022122-exon-sc0000405-1491911889:119761..119874Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:119109..119184TCONS_00022122-exon-sc0000405-1491911889:119109..119184Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:118779..118852TCONS_00022122-exon-sc0000405-1491911889:118779..118852Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:118167..118373TCONS_00022122-exon-sc0000405-1491911889:118167..118373Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:117501..117601TCONS_00022122-exon-sc0000405-1491911889:117501..117601Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:116981..117162TCONS_00022122-exon-sc0000405-1491911889:116981..117162Clytia hemisphaericaexon
TCONS_00022122-exon-sc0000405-1491911889:116586..116631TCONS_00022122-exon-sc0000405-1491911889:116586..116631Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:116586..126820 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.61832	1.33822	0.771594	0.254454	0	0.727796	0.761606	0	0	0	0	0	0.593136	0	0	0	1.23256	0.128275	0	9.23932e-10	0	0.722657	0.114979	0	2.69014e-09	0.12215
Blast
[Close]
BLAST of TCONS_00022122 vs. Swiss-Prot (Human)
Match: E2AK4 (eIF-2-alpha kinase GCN2 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 4.588e-23
Identity = 78/263 (29.66%), Postives = 133/263 (50.57%), Query Frame = 1 
Query:  895 SSGGEKQIDDQAKQIQSITQEFNYLKSKVNYGGLINYHALDFDHSATNISAKLLSDSITGLCLASYLQEDG-LPLSLLHHICRQIVDGLYFLHSKSVVHHNLNLETTFINEQNEVTLSGYAMVRRICDLC---IXXXXXXXFNDKTEEEEQNGGRGKLLFRQDMKAGKKGDIYNMGLIALSLYQGHSLIQLPIDFPEDLPDALLSFLKSCLDVEEDKRSTAAQLLQHAFICDKIIDNPKTKHT---QQNNGASKNDHSESNXP 1662
            +S  +++ID   KQIQ    EFN L  K+++  ++ Y A++      +I   +L + I+G+ LA++L   G +P+  L     Q++ GL +LHS SVVH  L+     ++ +  V ++ Y++ +R+ D+C   +   +   F+D                    K GKKGD++ +GL+ LSL QG    + P+  P DLP     FLK C+ +++ +R +  QLL+H+FI      NP+ K     Q    +   D+ E+  P
Sbjct:  326 TSQEKEKIDKCKKQIQGTETEFNSL-VKLSHPNVVRYLAMNLKEQDDSIVVDILVEHISGVSLAAHLSHSGPIPVHQLRRYTAQLLSGLDYLHSNSVVHKVLSASNVLVDAEGTVKITDYSISKRLADICKEDVFEQTRVRFSDNA---------------LPYKTGKKGDVWRLGLLLLSLSQGQECGEYPVTIPSDLPADFQDFLKKCVCLDDKERWSPQQLLKHSFI------NPQPKMPLVEQSPEDSEGQDYVETVIP 566
The following BLAST results are available for this feature:
BLAST of TCONS_00022122 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E2AK44.588e-2329.66eIF-2-alpha kinase GCN2 OS=Homo sapiens GN=EIF2AK4... [more]
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