TCONS_00022115 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022115
Unique NameTCONS_00022115
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1331

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022115 ID=TCONS_00022115|Name=TCONS_00022115|organism=Clytia hemisphaerica|type=transcript|length=1331bp
aaaaaatcatttaatgtctcaagagacataatcaccatggtaattgtttg
aaaacgaggcaagtgatgttcgtgacgtaatttatgaaaacgTCTATTCg
caaatttcgaatttttgccGTCGAAGGGTGATACCCTAAATAATTTTGTA
ATCTATATCATTTCAGTGAAGATAGAAaatgtaaaattgaaaaaaatgtc
aagATTTGAAGCCGGCCaatggaaattgaaaaattattagAGCCACTCGT
TGAATAACTTTTAAATAAAGATGGGTTTGGGTTATGAAGATGTTGTGTTT
AATCAGGAAATTACAGAGCGTAGAAGATCTAAAAGCAATGCTTGCGCTCT
CGAAGAAATCAGTTGGTACCATGGTGATATGCAACGTACGGCAGCCGAAA
TCCTCCTCCTATCTGACGGGATCTTAGAAGGAACATACCTCTTACGTAAA
AGTCGCCGTCATGATGATTACGCCGTATCGGTTCGTTGCGAAGGCTCCGT
TAAACACTTTATGTTGTCGTTTAGCGGGAAGGCACAATCGTATATTTTTG
GGAATGCTTCTTTTTACACGATACAAGAACTGTTAGATCATTTTGAATCA
TGTCCAATTTTGTCAAGGGATAATGATGTTCCAGTAACATTGATCAACCC
TTTGAACGTTGATTTGGACAATGAACCAGATGATTATATGGAGCCAGTCG
AACACATTGAAGGTGGtgcaaatcttttcaaaaaacaagaagtCACTCCC
CATTCTGGTTCAAAATCTGGTTATCTACATAAAAGAGGTGCCATCAGGAC
TAATTGGAAAAGACGATGGTTTACTGTCgacaaaaaatcattgaaatatt
ttgataatagaAGGACGGAGAAACCGATCAGAGATTTGGATATTTCGACG
GCAACGAGTGTCGAAAAAGTCGTCATCGATCAAAAACGAAATTCTTTTCA
ATTGGTGTTTCCACACCGGACATTTTATTTCTATACCAGCACTGCTAATG
AAGCAAAGGATTGGATAACCTTCTTTCAATGGAAAATTGGATTTCTATAA
CAAAAGATGATATTCAAAGGTGATTTATTGAATCTTCAGTAACGAATCAA
GGCAAGTTTACGATGCTGGAGATGTATCTGAGGATGTCTACCAGGGTTGC
TACGTCTGCCAGAAATATTTGTAGGTTTAAGTCTGCAATTAGCATAcctg
tttgaaagaaatcttgaCTTTAatggaaaaagtcctgaatgaaGGTAAAC
TTTGTGGATATTTCTGGATATTTTGGccgaaatagaaaaaaactctGAAT
TAAAACCTCTTAATATTTGCTGAGACTCGAT
Run BLAST on NCBI

transcript from alignment at sc0000405:71947..87046-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022115 ID=TCONS_00022115|Name=TCONS_00022115|organism=Clytia hemisphaerica|type=transcript|length=15100bp|location=Sequence derived from alignment at sc0000405:71947..87046- (Clytia hemisphaerica)
AAAAAATCATTTAATGTCTCAAGAGACATAATCACCATGGTAATTGTTTG
AAAACGAGGCAAGTGATGTTCGTGACGTAATTTATGAAAACGTCTATTCG
CAAATTTCGAATTTTTGCCGTCGAAGGGTGATACCCTAAATAATTTTGTA
ATCTATATCATTTCAGTGAAGATAGAAAATGTAAAATTGAAAAAAATGTC
AAGATTTGAAGCCGGCCAATGGAAATTGAAAAATTATTAGAGCCACTCGT
TGAATAACTTTTAAATAAAGATGGGTTTGGGTTATGAAGATGTTGTGTTT
AATCAGGAAATTACAGAGCGTAGAAGATCTAAAAGCAATGCTTGCGCTCT
CGAAGAAATCAGGTAGGTTATAATATTTTCTAAATTATTTTGGAGTTTAT
TGAAACGGTGGAAGTTTATCACGATTGCTTCGTTTGCGAGATTTACGTTT
GACTTGCTTGGCGATTCTTCTCCCATCATCAGCAAGAGGCAAGATGGAGG
ACTTTTTCTCCATTATTTGTACTAAGGCCTTCTGATTACACATACGTAGC
TAAACCATAGGCGGTTTTAGGCTATGTTGAACTTATCAGTGGAAGAGATT
TGTAGTTGTAATTTCATTCTCAATTAATGAGCGTTGCACTCCTTCGCATG
TTTCCGACGAACTTGCTCTATTGTCTTAAATCCGCCAGTGGCTAAACGGT
AAATCTCGAAATCCAAACCATGATAGACTTCCAATATACTATTTTCCTTG
AGAAAATAGGTCTGAGTACTTTGGTTACCTGATAACCTTTGATGTCTTAA
TAACTTTATTACTGGTTGATTTAAATTCAGTATACAATATCTGGCAAAAA
ATGTTCGTAAGACTACGGTTATTCGAAGCTCCAAGCTAGGGGAAGAGATT
CAGGTCGAACAGCAAGTATTTCAAATAACTAAAACAACATTTTTTCCGCA
GGTTTAAATAACCGAGGTAGTTTTTGTGTTGAGTAAGCAAATCCAAGAAA
AAGCCATCTAAATTCGGAAACTAAAATTATCGAGAATGGGCTGTTCCATT
AAAAAATCATACAGGGGGTGGACGACCCTTTTAATGTGTGGATACCTCTG
GAAAATGGCAAAATTGCAAAGATACCCTTGCCATACCTTAAAGTGAATGT
GGACGAACTATAATCAGTCTTTTACCCCTTGGGAATTTTAGAATAACTTT
TTACCCCCTTGGAAAAATGAAAAAACATCCCCTGGAAATTTTTCTTGGAT
TGCCCTCTGGAAATCTTCGTCTACCCAAGGGGGTAATGTAGGTATGGATG
TAAAATGGAGTCATCCGGAGTAGCAATAAGCCAAATCAGACCAAAGTTAG
GTGAATAATAAAACCCACTATTATATTGTTTACAGTTGGTACCATGGTGA
TATGCAACGTACGGCAGCCGAAATCCTCCTCCTATCTGACGGGATCTTAG
AAGGAACATACCTCTTACGTAAAAGTCGCCGTCATGATGATTACGCCGTA
TCGGTTCGTTGCGAAGGCTCCGTTAAACACTTTATGTTGTCGTTTAGCGG
GAAGGCACAATCGTATATTTTTGGGAATGCTTCTTTTTACACGATACAAG
AACTGTTAGATCATTTTGAATCATGTCCAATTTTGTCAAGGGATAATGGT
ACGGATAAGATTTTGTTTTGTTGCATTACAATTGATGCTTTCTAATTCGA
TTTTCAAGGGGAACTGGATTTTCATCGAATAATAGATCACACGGTCTTAC
AGCAAGACTTGCTAAATTAAAAAAATAAAATCGAAGCTAAAGTTTAAATT
GATTTTTCAACCATCCATCCATTTACTTATTTATCCATTCATTTATTTAT
CCATTCATTTACCCACTGATTTATTCATTCATTCATCCATCCATCTATAC
ATCTACCCATTCACTCATTCGTTCATTCGCTCCATTCATTCATTTATACA
TTCGTTCATTCATTCATTCATTCTTTCACTCCTTCATTCATTTATTCGTT
CGTTCGTTCGTTCGTTCGTTCGCTCGTTCTTTCATTCACTCATTCATTCA
TTCATTTATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATT
GTAGATGTTCCAGTAACATTGATCAACCCTTTGAACGTTGATTTGGACAA
TGAACCAGATGATTATATGGAGCCAGTCGAACACATTGAAGGTGGTGCAA
ATCTTTTCAAAAAACAAGAAGTCACTCCCCATGTAAGAGTTTCTTGTGAC
ATTGGGCTTTTCTAGAAATAGTCCGTGCCCCCTGTTGAGGATATCGGATA
TCCAGGGGGTTAAATATCTACAAGGGAGCGGATATTTCGATACTTCCAAA
AATCAATATCCTCAACAGTGGGGGTAAAAGATTTTTCTGGAAAAGCCCCT
TTCTTTGACCCACATTAGGCTCTAGTTAGCTTTACAAAGTATCAAAAGTG
GTGTGGAAAGGCTCTTCAAAAAACAAGAAATCACATTTAGNTGTATTGGG
CTTTTCCAGAAATAGTCCGTGCCCCCTGTTGAGGATATCGGATATCCAGG
GGATTAAATATCTACAAGGGAGCGGATATTTCGATACTTCCAAAAATCAA
TATCCTCAACAGTGGGGGTAAAAGACTTTTCTGGAAAAGCCCCTTTCTTT
GACCCACATTAGGCTCTAGTTAGCTTTACAAAGTATCAAAAGTGGTGGAA
AGGCTCTTCAAAAAACAAGGAATCACATTTAGGAGCTTTTGGTTGATTTT
GTTAGACCCACATTTGGAATATTGAATGTGGTTCAAACCATTCCCAAAAT
GGACATTGAACATCTTCCTGGTCTAGAAGTCGAGTTCTTTTGATTTTCAA
TGCTGATGTTGTGTTGCCCATCCAAAATCCTTGTAATAGAGTAGTTCATA
AAATTGGGTAGAGGCCAGGGCAAACCGGGCCAACATTTCATTCAATATTT
GAAAAGAAATGATGAAATGTTGGATGACAAACTAACTAAAAACGCTGATG
GCGAACAAACCGGTCCAACATTTTATCTAACATTCGAAAAGTGGCATGTT
TGATGAAATATTGGACTGGTTTGCCCTGGCCATAAGTCGTTGCAGTGGAA
TGGAAATGTGACGTCACTCAGCAAATCGACGGTAAGACTGCTCTTCGGTA
TTGATCACGTGACCAAATAAAATTAAATTTAACGTTTTTGCTTGAATTTC
CTGACCAGGTAGATATACATTGACATTATTCAAAATAAGACCTCGACGTA
GATACTGGCTCAGCTTCAGGCCTTTCATTACAGTAGGTCTTGCAATTCCT
GCATTAATAACACGCATGTGTAATTTGTCGTTCTTCTAAACCACAAACAG
TTAATTCCCGTGATAAACAAAGAGGAATGAATCTGTAGGGGTGGTACAGT
CACTTTCGGTCGTGGTTGTGGACAGCGAAATATGATACTACTTTTAGTAA
TGCAGGATTCGTTAGATAGACCCCCTCTTAGCTGTCCGTGGTGCTTTATG
TTCGTGTTTGAAGAAACAGCGCTTTTCCAATTAAAGTTAATTTTAGAAGA
AACTGCTTCTTGTAGCTATAAGTACGAAGTACCATATGCATTGCATTACG
AACAAGCATTCAACTAAGGTTATTATGGGCCTTGCAGCTTTGGGTTCTTG
TTTATTTAGACTATGATAATTTGTCCTGTATTATCTTTTCAGTCTGGTTC
AAAATCTGGTTATCTACATAAAAGAGGTGCCATCAGGACTGTAAGTAAAC
ATTCTAGGTCTGCAGATGACTTGGTTCATAATATTGAATGATTTTACTGT
GTTAAGGAAACATACGAGTTATAGAAGTTCGAATAATGGAGACTCCAATA
TTGGCTAAACACTTTCAAAAGCCGGTCAAACATGTTCCAAAAAGTACTGC
GATAGCAGAAACTCGGCCTTTCAAAACCGGAATACTATTTATTTTTTGTC
AAATACCGAAATACCGGATTATCAGCAACCTCTCACTTATAGGATCCCAA
AAAGCAGGAACTTTTAGTATCACTGATAGCCTAATGAAAATCCTGGAGGT
TGTTTCTCAATCCCATCAAAGCAAAGTGTTTTAATCAATCTGAGTTTTTT
TAAGTGGTACCCTTATGGTACCGCTACTCGATGTGAGTGGAGCGCTGGCA
GCGTATGACGTAAGGGCAACTTTTATAACTTCTTTTTTCACTTTCGAAAA
AACTCTGATCAAAGATGGCGGGTATAGCTTTGTCAAGAGTGTATACAGGT
CATTGGTTAGTACAAAAAACTATAAACCGTATTGTATAAGGGTTTCGAAG
CAATATATAAAAAACTGTCCGACATGTTGAAGGGAAATTACTTTTGTATA
CGGTACTTGTTTTCCCACGTGCTGGTGCGTAACTTACTTAGTTTCTCTTT
TTAATTATCCATGTAGGTGTTAGTATAAAGCTTACATAAAAATGAAATTA
TTTCTACCCCGGAAAACGTGTAACACGTGGTAGAGAAATTATCGAATGAG
ACAGTACCCAGCTGGCACACAACGTTGTTTCAACGTTCATCAAACGTTAT
ATGGACGTTGTGAACGTTAGATAGACGTTGAAACAACGTTGTGTGTCAGC
TGGGTACTGCCTCCATTGATTTCAAAGCCTCGAAAGGGCAAGACTTGAAA
CTCTTGGATGTGAAATTGAAGCCACTTATTCCCCCTTCCCAAAACGCGTG
ACCCGCGTGCTTTTCAAGTATCATAATCTCTGCTGTGATGCAATTTGTAT
GGTACAGGCCAAACCATAAACCATCCACGCTGCCACGCTTTTTTATTGCT
CAATCAAAAGATGCAATAACAATGAAGATTCTAAATTAGAATTTGATTCG
TATTTTGCGGTTTCTACATACAGACAGATGCCAAATTATCTTTAAAAATT
AAATGATTAAATAAATACCCTATTCTGATATGATGACTCTTTTTGAATGA
CCGTGCATAAGAGCTTCTTTCTTAGAACTCTAAGATGGATTTTTTTACGC
ACTTTTTAATGATAAGGTCCATCTTTGCCCCAAAATTTCAGAAACTATTA
TTTTCTTCAACTCTGTCCTAGATCTTGAAATAAAATAGAAAATTTATTTT
TTATCTTCCAATTTTTAGATCTTGTCATAGCTGTTGCTAAAGAAAACATT
AGTTCTTGAATTTCTGCCCCTGGGAAAGATCGGTTTTTGATAATTGGTCC
CTGACGTAAAAATTCATCATTCTATCCCTGGCCTTTAAAATGCCTACTGA
TGTAGAGATCAGATTGATTTCTGCCATGTTCTAAAAGTTGGAAGAGGGAA
GTTTTCAACCAAGGAAATGAAATTTCATCATTTTTTTCTTATATCATAGA
ATTGGAAAAGACGATGGTTTACTGTCGACAAAAAATCATTGAAATATTTT
GATAATAGAAGGGTAAGTACAGTGTCGAGCTCTCCATAATTCAAACACGC
ACGGGGAACACAAAGTTGTTCGACTTAAGAAAAATCTTTTTCAAAATGAA
ATATTTGGAAAGTATTTTCTGGAAGCAGTTGCTATTCTTATTAAAGTCAG
ACGACATTGTGCTCCAAAACTGTAAAAAATTAAAATATCAAAATTGCCCA
ACCTATTTTCAGATTTTCCTTTTTATTACGCTAAGGCTATAAGAGGCAGA
GTATTTCATTAACGACGCCTGCTAGGTTTCGGTATCGGTATAAATTCAAC
GTCATCTTTGTACCTACTTGGGTTGGGCGGGTTGAGTAATTTTCTATTTC
GAAATACGTGACTCGTATCCTTTGGTCCTTTCTCTCAACATATCTAATTC
ATGGTTCGTACCGTTTCAGTGTCTTCTGTTATTACATCCTGGACCAAATA
GCTGATTGGTTGTAAAGTGACGTAGAATTAGTCAATACGTCACTTTCAAC
CAATCAGCTGTTAGGTCTGTGAAAGACATTGCAATGTTGGTGCATATCAT
GAATAGCAAGGTTTAATTATCGATGGATAAATCATGACTGCGGACGAATT
TTATCTACACTCTCAGTTTTAAAGGTCTTTATTAAAACCTTTTGGGTGTA
TCAGGTAACGATCCGTTATCGCAGAACGTTTTGGGTCTTGTTCTAAATCA
GACCTTAAGGTCTTGATTTTAATAAGACCTTTATCGCGCCCAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCTAGATATTTTTCTAACAAATATCCATTATATTATGTATATAA
TAGTTCTTTGATATCGAAACGTACAAGAGATGTATTGTACGTGTCCAGTT
TGTTCATGATAATGATGATGATTCACGACAAAGTCTAGCTGTTTATGTAA
GTACGACTGTAAACGAGATTGTCAAACAGACGTCCGTGTCCAAGAGTTGA
AAATTGAATAGACGTTTGTTGGTGACGGTGACACAAAACTTTAATGAACT
GGATAGTTGCGTGCTAACATGAAAGCTGGATAGTTGCGTGCTAAAAAATT
CAAGAGAAGTGAGATAAAGATCACAAAACTGGTTTTTAGGCCTAAAATGT
CATTTAGAAAATTTGAAAAATTCTTTACTTTTGATCCAGCTCTTCAAAGT
TTTCAAGAAAAAAAACAAAACAAATTGGGCAAAGATATATTCAATTCTTA
CCTCAGCAGAGAGTCGATTTTGTACTACTTTAAACAAACGTTTAGAAAAT
GTGATGGTGGGATTTACAGCGACAGTGACATGGGCTCACATGATGTTGGG
TTAGATTCTCGTTAATGTCGAAGCTGAAAAAAATAATATAATAAAAGATT
TAAAACGAATATTGCACAAAAAATAAAAACACCCCTGTCTCAGTGCCCCG
GTAGAACTTTTTCCCTCAGTGGGGATGAAAATTTCTATTAAAAAGGCAAT
GGGGATAGAAAATCTATTGTTTCCAGCTCGAAAATTCCAGTGGGGATGGT
TTTGGAGTGCAATTTTTTACATTCAGTTTTCAATGGGGATAAAATCATAG
AGCAATTTCGCAGTGGGGTTGAAATTGTAGGATAATTTTTCCACCGGGGA
CGATTTTTTGGCCTATTTTTCCACCGGGGTGGGGGGTCCACCGGGTCTTC
GACACAGGGGTGTATAAAATAAAATTTCGTAAAAGCCTAGCTAGTAGGAT
CAATAAATACAAGCACAAAATTCGATCGAGCGTCGCCAAAACTTTCCATG
GGTGTATTTGCAACAATATAGCTCCATGTTTGTGGAAGAAAAAAGGATTC
ATCCGATCAAAAGATATATAGCTCCAGTTGACAAAAAAAGGATTTTAAGA
AATTTTATTACGTGAAGATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGTCTTGTTTCAAACGCGTGATTGAG
ACCTTTAGAAGTGTTGAATAAGACCGTTTCCAAGAACAGACCATGAAGGT
CTTATTTCGAAAATACAAAGGAGACCTCTTTGGTGTATAGAACAAGACCT
TGCTTGAATGGAAACCTTGCAAGGTCTCAATCGGCCACACAAGAGTTTCA
ATTCAGACCTTTCGTGATATACTGACATCTAAGTAAAAATTAGACCGGCT
AAGGTCTCAAAACTAAACCTAAAAGGTTTGAATTCAGACTGATAAGGTCT
TTCTTCAAATTAGCATCTAAAAGGTCTCATATAAAACCCTAAAAACTGAG
AGTGTAGCCTCCGTCCGCCACAGTATTTTTCTACATGATAACCGGAAAGG
TAGACTTTCCCCGCGTAGTATACCCGCTTTGCTTTGCATCTAGAAGCTAA
GTTGATTTCGCCCGTCGTCATGAATTATCTAGCGGTATAACCTCGATAAT
ACACGTATTTTTTATGAGTACATCCAAAATTTTTTAAGTCTTGGGATGTT
CTTAACTTTTTGAGTTTTAAGCTTAAAAATGTTCTTAACATGTTCTTATT
TTCGCCATTTTTTGAGTGTTTTTGTCTATTTTCCTAAGAAATTGGGTGTT
TTAGAGCTCACAAAGCCTTAAAATGTTCTTAACTTGTTCTTGACATTTTG
GTCGTCGAAGCCTTTTATGTTCTTATATAGATTGTTCTTATAAAAAGAAC
GTGTATCTTTATATCGGTCCGTTACCATAATGTGTGCTTCGTTCATTAGA
CGGAGAAACCGATCAGAGATTTGGATATTTCGACGGCAACGAGTGTCGAA
AAAGTCGTCATCGATCAAAAACGAAATTCTTTTCAGTAAGTTTTGAATAT
ATTCTTGTCGTGTATATACACAATATTATTTTTTCCATTTCGAAGCTCTA
AGTATGGAATATCTGCTACGTTGGAATTACAGAGGTTCTCAATTTCGAGC
TAGAATTAATACTTGTTTGAAAGACGTAATACATGAGTGTTCTTAACTTT
TTGAGTTTTAAGGCTAACAATGTTCTTAACATGTTTATATTTTACCAATT
TTTTATGTATTTTTGTTCATTTTCATATGAAATTGGCTGTTTTCGAGTCC
GCGAAGCCTTAAAATGTTCTTAAATTGTTCTTAATATTTTGGCCATCGAA
GCCTTATGTTCTTGTGAAAAAGACGTGTGTTATTAGTTATGTGTCTTGAT
ATAGATTAACATCGCTCCTTTTAACATGTGTTGCGTTTTTTTATAAGAAC
AATAACATAATAACACGCGGCTTATTTTGAACAAAGAACATAGCCTCCGA
TCTCAGAAACGGTTAAGAAAGTGCTGATGTCAACAAAGGGATAAATTAAG
TATTATTTAGAGCATTCAAGCATAAGCATCGCCGTGCCTCAGCCAAAATT
TACTGATTCTTATAAAAAATGTATGTGACCTTATAGCATTATCTCAATGC
TGTAAGTGTGACCTTATAGCAGCTTCTTAATGCTGTAAGATGAACCCACT
CCAAGCAATGAAGTCCCCTCAAAATTGTTTTGTTCTTTTATCTTTTTTCT
ATCGTATGAAATACAAAACCACTGTCAAGCCTCCTGGAAAATTCACGATG
AATTAATTGTATCTTTTGCGTTTTAGTTTTTTCTTGGACTGACTGCTTTT
AGTTTCGAACTTGATAATTCAAGTTGAATGATATTTCTAAATGGAGGAAC
AGAAATACAAGGGAGTTGAGTGTTATATAATTTCTGCGATTGATGTATAG
ATTGTAGATCTTACAGCGGATTTACGAAAATTTTAGGGTATCTGTTGCAT
ATTTTACAATTGTTTTTTTATTTTTATTTTTTTAGTCTGTGTCGTCGACT
TTCACGATTTTACTGAAAATATTTAACGTACTTACGACTAACTATCGATG
AGTTTGCTCCACATTCAAATGAAAATATTATTGCTGAAAATGCAACTGTT
CAATAAAATCCCTGCCAAAATATGAGCCAGCTTGGTTTTGAACTTACTTC
AAAGTGGCTGTTACCACCGCAGCACTATCTGAATTTTTGCGATTTTGCTG
GATTTGATTGTCGAGCGAACTTTTGGAAAGCTACCTGTAATTACAATACG
TTTAGATGTAGATTGCACGCATGCCCAGAATTAATATTGATTTTGGGGAT
GTGCACCCTGTGTAAAATTCTCGTCCGAGAGTTACCGCAATTTCCAACCA
ATCCATTAACCTCTAGCCATTCAAATTTTTAAATAAAATTTAATGAAATT
TAAAGATCTCTCTTATAAAACTTACTAATCTACTAATCAAGCTAATTAAG
TTTCTAAAACTAAAAAAAAAGAGACGGGGTTAACTCTCGGACGGGGATTT
TATACCCGTTGCGCATCCCCTATATCAAAACATATCAGAGGAGATGCGTG
CAGCCTAGTTTAGATGTGGCCTTCGTCGAGCAGCAATTTTGTTGCCATAT
ACTATATGAATGAATGATATCATGTTGATAAGCAAATTCGTTCTTTTAAA
TGCAATCAAATATCACCAGTCTGTTTTCTTTAGTTTCACAGTAATTGCTT
TAAATTATCGACCTTGTGTACTCTATATGCTCAGTCAGTACACATGTATT
TTTTCTCTGTTGTTATTAAATTGAGATTATAGCACGCATTTTTGTTATGC
GTGTTTTCTCATCTTATGCTCTTGTCGTTATATGCTCTTGTAGATTTGAT
TGACAAATCTTATCATCTTATCTCATTATATTTTCATATGATGACGAGTT
GCCATCAAAATATTTTGCTGTCGAGTTTGTGTTCGTCATAATGATAATAA
AACTTTTACGACGTTTTGTTTATTATGTTTTGAGTGTTGGATTTTTGTTA
GATTTTAGCTTTTCTACTTTNTTACGACGTTTTTGTTTTTTATGTTTGTT
TTGAGTGTTGGATTTTTGTTAGATTTTAGCTTTTCTACTTTCATTTTTGT
AAATTTCGTGTTCAGTTTCTCTTTCTTGTCAGTCGTCTGCTTCAGGCTCA
TTTAGGTTCATCTAAAGATAAAATTTCCGACTAGAAACTCGAAGAATCTT
GGTGAATTTGTTGTATAAAATCGATTTTCCATTTTAAAAATTTACTTATG
ATATTTCTGTTGAATAGAGAGGTGTCTACCTTGGTTTAGAAAAGGCTTTC
TAAACATTTGTTATTGTATGAGAAAGATTCTTATTAACTTTTTCACTGGA
CTGTGTACTCTAAATATTACCCCAATATTGGGTGATTATATTAGAGCAAT
TCTTCTTCTTCTTTCGATAACTATAAATATTTTCAAAATTAAATAAAGGG
GGGGTCCTAACAAGAACGAGGGAATAGGGTCTGAACATTTTTCGAAAACT
AATAAACGAGGGAGACGTTTACAATCCCACTGCTTGCAAATTATATGTAT
TACGTATATGTTACGTATTATGTTGAAACAAGGAAGTTTGAATTTTCTTT
TGGTTGAAATTTAGATATTAAGAAAATCTTGTTAGTTTTTTTAAGTGTAA
TTCAGAAATTTCGGTTACTTTCGTTTTCGATTTGAAATTTAGTTTCCGTG
TTTTGTTGAATTCTCTAAAAAAAGCGTCGGTGTTTGAGCTCATATTAAGN
CTGTTTGGTTGAATTCTCTAAAAAAGCGTCGGTGTTTGAGCTCACATTAC
TTCGTTTCCAATTTCTCATTTTGTTCGTAGGTATATGGAAGATGATGGCA
CAGATTTAAGCACTGACCTTTATATACCCTGGACCAAGTTTCTCAATCCC
GGCAGTGCAAAATCTTTGATCGGAGTTTTTTTGAAAAGTGGTACCCTAAT
GGTGGGACTACTCAATGGCGGTGTAAATGCATCGAGAGCTACTTTCCCTC
AAATATTTTTGTTGATGTAGCGCCATTTGACGTTAATTTTTAACATTGCA
ATGGCTTCTTGTCGTGTACCAATTCCAAAAAAACTTCAATCAAAGATGGC
GGATATAGCTTGGTCCAGGGATATATAAAAGTCAGTGTATTTAAGTCAGA
TTATAATATTGAGGAGAATCTGTCTAAATACAATTGTTACTAAGTTCCTT
ATTAGAAGAGTGGCAATTTTTTTTCCGGCCTTATTATGTGGACAGACAAA
ATCGAACCCCTCAACTTTGAGTGACAATGATACTGTTTTCTTCATCTCTC
CTGCTGGCATTTATAGAGGTTTTTTCAAACGTCATTTATTATTTGGGTAA
CATGGACGCCCGGACGTAATTTGGTAGTTGTTTCGAGGTTCTGTGCCAGC
TCGCGATTTATATACGTTTATTTATAAGAGCATAGACTTTGTTGATTTGT
TGATGGCCAAAATATTAAGCACAATTTAAGAACAATTTTTAAAGGCTTTG
CGGACTTTAAAACACCAAAGTTCTTGAGAAATTGCACAAAAATACTCAGA
AAAAGAACATTTTAAGGGCTTTTTGGCTTAAAACTAAAAAACTAAGAACA
TCCAAAGGACGTATTTATAAAAAAAAACGTGTATACTATATTTGAGACCC
CAGTACTCATCTATTTAATGTAAACTGCTATAATCCTCACCCAATTGGTT
TAGAGAGAGCATCGGTGTAGTTACGGTAACCTTTAAAATGGACGTTAGAA
AGTCGTTGCTATGACGTTACCTATTGCCTCGTACTTTATAAAATAGTTTA
AAAATAAATCTTTGCCTGGGGGTCTGTAGTTTAGACTTCTTAGTTTAGTA
AAATATCTTTGTTGATTCATGTTTCAATTTAGATTGGTGTTTCCACACCG
GACATTTTATTTCTATACCAGCACTGCTAATGAAGCAAAGGATTGGATAA
CCTTCTTTCAATGGAAAATTGTAAGTATAAATTCATTCAGCCATGATTGT
AGAAGTCATTGTTTAACCATTGAAATTCATGTAGTATCAGGCCCGTAGCA
ACCGGGGGCACATAAGCATTTACCCCCCAAAAATCTTTTCCAAAAGTTGG
TAGCTTTAAAAAATCATGTATTAATAATGGCTTCATTTTTAACATAATTC
TTTAATTAGATGCGTTTTCCAGCAATCTAGACCCCTTAAATTGCAAAATT
TCTTCCCTCGGGCCAAGGCCCTCGGTTTATATTTCTCACTTTGCCCCCCT
CAAAATGAAAATGCTTCCTACGGGCCTGTAGTAAAGACCATTGAGTTTAA
AGCCGAATGCAAGAGAAAGTGAAGCCTTTTAAGACTTGTGCCGCTTTTGT
GATGACAGATTGAATCTAACGTTGTTTTTTTTCACGCGACGCATTTTTCG
AAACATGGTGACAGATTTTATTTTCAATACGGTGTTTGTGTAAAAATGCA
CGTGGGTCACGCTTTTTGGATGGAGAATCCTCCTCTTCTAAATTCAATGG
TATAGACGTGGAATATAGTGTACAAGGCACAAAAGAACATTGCAAAATAG
TTTGCTTTGAAGGTCGCAAAGGGCTTTTCCATAGATTTTCTATACAGGGG
GTTGGACAAACCTTTTCAAGGCACAAGATTCTTGGAAATGTGTAGATACC
CCCTGAAAATGTTCGTCCTGGGGGGCTGGGCCCCTGTATGGTTATAAAAT
AGAATGGCCCAATAATGAACCACGATATGATAACCTTTGATGTGTAGTTA
GTTAGATGGTAGATATTTTACGGTGCCGTAGGAAGCATTTTCTTATTGGG
GGGACGAAGTATAGTGACACTGCGAGGGCCAACCATGGTTTGGCCCGAGG
GGGGGGGGGGGTTTGAAAAATTTAAGCTCTAGATTGCTTGAAAATGCACT
CAAAACAAAACGCTTTCAAGAAAAAACAAGAAAAACTTTGCATTTTGCAA
AATACCCATTTTTGAAAAAATTATTTGCTACGGCACTGTTTTAGATGGTA
AAATTTCCAAGAAAAATTTGTTATTATTAAAATGTCATGTTGTAATAGCA
ATCAAAGAGGAAAAAGTAACGAGATTTATGATTTCATGATTTAGCGATTC
TTCTACACTCAAATGCATCGGTTTTTAAGCAAAAAGCGGATCTATCTAAT
CAAACAAAGGAGTAGAAAGTCGCAAATTTTGAAGAAAGGGAATTATTTGT
GGTTTGAAGATTTAGACAAGTATGATAGGTATGGTTTTGTAAAACGCGGA
AATAACGCGGAAATAGTTTTGAATGATTGAAATGCATTCAGAGATAGTAT
ATTGATAGTTTAGTAATAGTTTTCAGATAATTTTATTGATCTTTAAAACA
TTTTTCTTTTGAATTAAACTATGATAAAAACTTACCTGTCCTCGCTGACC
TGTCACCTTTAACCTGTAACCTACGTTTTACAACCAGCAACATGCGATCG
GAAAACGAGATACAATAATATTGGAAAGATATTTTTAAGAGGTGGTATTT
AATTCAAAATGGAAACAACGTTCGTGTTTAAAAATTTGATTCTTTTGCTT
ATTCATAGGATTTCTATAACAAAAGATGATATTCAAAGGTGATTTATTGA
ATCTTCAGTAACGAATCAAGGCAAGTTTACGATGCTGGAGATGTATCTGA
GGATGTCTACCAGGGTTGCTACGTCTGCCAGAAATATTTGTAGGTTTAAG
TCTGCAATTAGCATACCTGTTTGAAAGAAATCTTGACTTTAATGGAAAAA
GTCCTGAATGAAGGTAAACTTTGTGGATATTTCTGGATATTTTGGCCGAA
ATAGAAAAAAACTCTGAATTAAAACCTCTTAATATTTGCTGAGACTCGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012401XLOC_012401Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022115-exon-sc0000405-1575043694:86685..87046TCONS_00022115-exon-sc0000405-1575043694:86685..87046Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:85399..85661TCONS_00022115-exon-sc0000405-1575043694:85399..85661Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:84815..84942TCONS_00022115-exon-sc0000405-1575043694:84815..84942Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:83307..83354TCONS_00022115-exon-sc0000405-1575043694:83307..83354Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:81635..81697TCONS_00022115-exon-sc0000405-1575043694:81635..81697Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:77812..77897TCONS_00022115-exon-sc0000405-1575043694:77812..77897Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:73826..73914TCONS_00022115-exon-sc0000405-1575043694:73826..73914Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1575043694:71947..72238TCONS_00022115-exon-sc0000405-1575043694:71947..72238Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:86685..87046TCONS_00022115-exon-sc0000405-1510915933:86685..87046Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:85399..85661TCONS_00022115-exon-sc0000405-1510915933:85399..85661Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:84815..84942TCONS_00022115-exon-sc0000405-1510915933:84815..84942Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:83307..83354TCONS_00022115-exon-sc0000405-1510915933:83307..83354Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:81635..81697TCONS_00022115-exon-sc0000405-1510915933:81635..81697Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:77812..77897TCONS_00022115-exon-sc0000405-1510915933:77812..77897Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:73826..73914TCONS_00022115-exon-sc0000405-1510915933:73826..73914Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1510915933:71947..72238TCONS_00022115-exon-sc0000405-1510915933:71947..72238Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:86685..87046TCONS_00022115-exon-sc0000405-1491911889:86685..87046Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:85399..85661TCONS_00022115-exon-sc0000405-1491911889:85399..85661Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:84815..84942TCONS_00022115-exon-sc0000405-1491911889:84815..84942Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:83307..83354TCONS_00022115-exon-sc0000405-1491911889:83307..83354Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:81635..81697TCONS_00022115-exon-sc0000405-1491911889:81635..81697Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:77812..77897TCONS_00022115-exon-sc0000405-1491911889:77812..77897Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:73826..73914TCONS_00022115-exon-sc0000405-1491911889:73826..73914Clytia hemisphaericaexon
TCONS_00022115-exon-sc0000405-1491911889:71947..72238TCONS_00022115-exon-sc0000405-1491911889:71947..72238Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:71947..87046 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.170188	0	0	0.0393952	0	3.29894e-09	8.46608e-07	0	0.549998	0	1.44501	0.486678	0.417902	1.17874	0.906526	0.863645	0	1.7358	0	0.686314	0	0	1.37663	0.695423	1.01925	0	0.716229	0.45441	0	0
Blast
[Close]
BLAST of TCONS_00022115 vs. Swiss-Prot (Human)
Match: DAPP1 (Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide OS=Homo sapiens GN=DAPP1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.751e-44
Identity = 88/241 (36.51%), Postives = 137/241 (56.85%), Query Frame = 1 
Query:  325 RSKSNACALEEISWYHGDMQRTAAEILLLSDGILEGTYLLRKSRRHDD-YAVSVRCEGSVKHFMLSFSGKAQSYIFGNASFYTIQELLDHFESCPILSRDNDVPVTLINPLNVDLDNEPDDYMEPVEH--IEGGANLFKKQEVTPHSGSKSGYLHKRGAIRTNWKRRWFTVDKKSLKYFDNRRTEKPIRDLDISTATSVEKVVIDQKRNSFQLVFPHRTFYFYTSTANEAKDWITFFQWKI 1038
            RS   A  L+++ WYHG++ R AAE LLLS+G  +G+YLLR S      Y++SVR + SVKHF + ++G   S+ FG   F ++++ + HF + P++  +    + L +P    ++ EP  Y     H  ++ G          P  G+K GYL K+G +   WK RWFT+ +  LKYF ++ + +PIR LD++  ++V+     ++ N F LVFP RTFY    T  EA +WI   +WK+
Sbjct:   22 RSDGEAELLQDLGWYHGNLTRHAAEALLLSNGC-DGSYLLRDSNETTGLYSLSVRAKDSVKHFHVEYTG--YSFKFGFNEFSSLKDFVKHFANQPLIGSETGTLMVLKHPYPRKVE-EPSIYESVRVHTAMQTGRTEDDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKL 258
The following BLAST results are available for this feature:
BLAST of TCONS_00022115 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPP13.751e-4436.51Dual adapter for phosphotyrosine and 3-phosphotyro... [more]
back to top