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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021885 ID=TCONS_00021885|Name=TCONS_00021885|organism=Clytia hemisphaerica|type=transcript|length=657bp
AAAAGGTCGATAACAAAAGAAAGGTGATAAATGGTTGAACTTCTTCAAGA
AAGAAATGGCTGTGTGATGCATATTTTTCTGGGAAGATTTTTAATGATAA
ATGGAAATCGagaggaaaatcaaaataaatcgcATAAATTTTATTCAAGT
TATCTTCAAAATGTACTTTGAACTGCAGCACAAAGAGGAGGATCGAAGAG
AGTATGGATTTCATTATTTTGGTGGTTTTAAATGCGCGATCAGTAAATAC
ACAAACGAAGATACAGTCAACTACGGCAGACCTGATGAACAACATTACGG
ACTTATGAATCTATGAAGGGACCAGATAGTAACGCAGGAACCATGAAGAG
AAAGGACAATCGCCGTCATTCATTTTGTTAGTTTTCCAAATCAAAGTGAC
TTACATTTACTGTACTGTAACCGCagtaaaaactttatatattgaaTGAT
TAAAACACGTCTTTTTCTTGAAAGTAATTGGACAAAAAATGACTTAATAC
ACATGCGAATTGATTGAGTCACGGAAGCATAAATAGAAATACTTTAATTT
ATTCAATTATATCATATTGACTCAGTGTCATTactgttattattattata
cgtCTTTTACGAATTTGTAACAAATTTTTAAaggagaaaagttaaaatgg
aTGTTAA Run BLAST on NCBI transcript from alignment at sc0000396:260250..261295+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021885 ID=TCONS_00021885|Name=TCONS_00021885|organism=Clytia hemisphaerica|type=transcript|length=1046bp|location=Sequence derived from alignment at sc0000396:260250..261295+ (Clytia hemisphaerica)
AAAAGGTCGATAACAAAAGAAAGGTGATAAATGGTTGAACTTCTTCAAGA
AAGAAATGGCTGTGTGATGCATATTTTTCTGGGAAGATTTTTAATGGTAA
GTTTTCAtaatttgaaagtaattttatcatttttaaaatcaaaaataaaa
tttttccatataaaattcgatcgaaatatatattttaaagagtcaataac
acagcaaaaaatGAATGTTTTATGTGCGCCAAAAAGTCTTTCGTCCAATC
ATATTTTGATNATTTTAAAGAGTCAATAACACAGCAAGAAATGAATGTTT
TGTGCGCCAAAAAGTCTTTCGTCCaatcatattttgatattttctctttc
AAGAAATTGAGCAAAATGGagctcttttttattttgttttttgtgaGTGA
CGAGTGATGACACTGGATTGGATAAAGTgaggccaaaaaagtttttgact
ttcagtTTTGTGTAAAAAAGGTCAACTTCTTTTAGATAAATGGAAATCGa
gaggaaaatcaaaataaatcgcATAAATTTTATTCAAGTTATCTTCAAAA
TGTACTTTGAACTGCAGCACAAAGAGGAGGATCGAAGAGAGTATGGATTT
CATTATTTTGGTGGTTTTAAATGCGCGATCAGTAAATACACAAACGAAGA
TACAGTCAACTACGGCAGACCTGATGAACAACATTACGGACTTATGAATC
TATGAAGGGACCAGATAGTAACGCAGGAACCATGAAGAGAAAGGACAATC
GCCGTCATTCATTTTGTTAGTTTTCCAAATCAAAGTGACTTACATTTACT
GTACTGTAACCGCagtaaaaactttatatattgaaTGATTAAAACACGTC
TTTTTCTTGAAAGTAATTGGACAAAAAATGACTTAATACACATGCGAATT
GATTGAGTCACGGAAGCATAAATAGAAATACTTTAATTTATTCAATTATA
TCATATTGACTCAGTGTCATTactgttattattattatacgtCTTTTACG
AATTTGTAACAAATTTTTAAaggagaaaagttaaaatggaTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021885-exon-sc0000396-1491911889:260250..260345 | TCONS_00021885-exon-sc0000396-1491911889:260250..260345 | Clytia hemisphaerica | exon |
| TCONS_00021885-exon-sc0000396-1510915933:260250..260345 | TCONS_00021885-exon-sc0000396-1510915933:260250..260345 | Clytia hemisphaerica | exon |
| TCONS_00021885-exon-sc0000396-1575043694:260250..260345 | TCONS_00021885-exon-sc0000396-1575043694:260250..260345 | Clytia hemisphaerica | exon |
| TCONS_00021885-exon-sc0000396-1491911889:260735..261295 | TCONS_00021885-exon-sc0000396-1491911889:260735..261295 | Clytia hemisphaerica | exon |
| TCONS_00021885-exon-sc0000396-1510915933:260735..261295 | TCONS_00021885-exon-sc0000396-1510915933:260735..261295 | Clytia hemisphaerica | exon |
| TCONS_00021885-exon-sc0000396-1575043694:260735..261295 | TCONS_00021885-exon-sc0000396-1575043694:260735..261295 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000396 | supercontig | sc0000396:260250..261295 + |
Blast
The following BLAST results are available for this feature:
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