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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021884 ID=TCONS_00021884|Name=TCONS_00021884|organism=Clytia hemisphaerica|type=transcript|length=736bp
AAACCCTAATTGATGAACCTTTTGAGAACTTCCTTGATCTTAATAAGTGG
ACAAGTATACTATTTTAAGAGATTTGAGTTCTGTGTAATCTTCCTTATAG
AGAGAGTACAAAAGACAACAAAATTCAGTCAACAATCATTCTCAAGTTGA
AAAACAACAAGAATAACTCAAACGAAAACTGaatctttttgatttcaaac
tttCTACAAAAAACAAAGATGAAGATGTTTAAAGCTTTATTGTTGATCTA
TCTCGTCGTTTATGCTGTGCATTGTCGATCAACAGTGGATAATGAAGAAA
TGgaacttgaaaattttctcgaaaaaaatGCTGAATCATTGGAAAAAGAA
TTTCATCAATTCCAACAATTATCTGAAGATGAAGATTTAGAACTTCATGA
TCCAATTTGGGGTCTTGCTGCAAAAGTTGCTGCGAAAGCAATTCCATCTG
CTGTTAGATTGTTAAGCAGACGAAGAAGTGGCAAAAAATAGAAGAATGaa
gaataattcttttttcacATCGACTGTAAATCTTGATTATTTTTCTAATG
CTGGTCATTGAAAATAGATTGATTCTACACAAAATATGATAAACTTCCTT
TTATTTTCTATCTCCTTGATTTAGATTTAAAATGCAAGGTCACTTTGGAA
CTTTTGAAAGCTGATAACCGTTTTGTACATTTGCCGAGGAggagaaattt
taaaaacactcaTTTCGACGCTTTGACAAAGTTTTG Run BLAST on NCBI transcript from alignment at sc0000396:248225..249193+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021884 ID=TCONS_00021884|Name=TCONS_00021884|organism=Clytia hemisphaerica|type=transcript|length=969bp|location=Sequence derived from alignment at sc0000396:248225..249193+ (Clytia hemisphaerica)
AAACCCTAATTGATGAACCTTTTGAGAACTTCCTTGATCTTAATAAGTGG
ACAAGTATACTATTTTAAGAGATTTGAGTTCTGTGTAATCTTCCTTATAG
AGAGAGTACAAAAGACAACAAAATTCAGTCAACAATCATTCTCAAGTTGA
AAAACAACAAGAATAACTCAAACGAAAACTGaatctttttgatttcaaac
tttCTACAAAAAACAAAGATGAAGATGTTTAAAGCTTTATTGTTGATCTA
TCTCGTCGTTTATGCTGTGCATTGTAAGTAAATCATTATTAAATCCTGTT
GGTTTATTAGCAGGATGATTAAATGATGCCACTCTAAAGGTCTTTGTTTC
AAGTGACCTTAGCATGAAATTAGAGAAGAAAAACAATTGTTTTGACAGGA
GTAAgcttcaaaagtaaatttctCGATCCAAATTTTTTAACAGTATATTT
TCTCAGACCTACAATATCCTTCACTTAAAGCTATTCTCTTTTTATCAAAC
TTTCAGGTCGATCAACAGTGGATAATGAAGAAATGgaacttgaaaatttt
ctcgaaaaaaatGCTGAATCATTGGAAAAAGAATTTCATCAATTCCAACA
ATTATCTGAAGATGAAGATTTAGAACTTCATGATCCAATTTGGGGTCTTG
CTGCAAAAGTTGCTGCGAAAGCAATTCCATCTGCTGTTAGATTGTTAAGC
AGACGAAGAAGTGGCAAAAAATAGAAGAATGaagaataattcttttttca
cATCGACTGTAAATCTTGATTATTTTTCTAATGCTGGTCATTGAAAATAG
ATTGATTCTACACAAAATATGATAAACTTCCTTTTATTTTCTATCTCCTT
GATTTAGATTTAAAATGCAAGGTCACTTTGGAACTTTTGAAAGCTGATAA
CCGTTTTGTACATTTGCCGAGGAggagaaattttaaaaacactcaTTTCG
ACGCTTTGACAAAGTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021884-exon-sc0000396-1491911889:248225..248497 | TCONS_00021884-exon-sc0000396-1491911889:248225..248497 | Clytia hemisphaerica | exon |
| TCONS_00021884-exon-sc0000396-1510915933:248225..248497 | TCONS_00021884-exon-sc0000396-1510915933:248225..248497 | Clytia hemisphaerica | exon |
| TCONS_00021884-exon-sc0000396-1575043694:248225..248497 | TCONS_00021884-exon-sc0000396-1575043694:248225..248497 | Clytia hemisphaerica | exon |
| TCONS_00021884-exon-sc0000396-1491911889:248731..249193 | TCONS_00021884-exon-sc0000396-1491911889:248731..249193 | Clytia hemisphaerica | exon |
| TCONS_00021884-exon-sc0000396-1510915933:248731..249193 | TCONS_00021884-exon-sc0000396-1510915933:248731..249193 | Clytia hemisphaerica | exon |
| TCONS_00021884-exon-sc0000396-1575043694:248731..249193 | TCONS_00021884-exon-sc0000396-1575043694:248731..249193 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000396 | supercontig | sc0000396:248225..249193 + |
Blast
The following BLAST results are available for this feature:
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