TCONS_00021683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021683
Unique NameTCONS_00021683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021683 ID=TCONS_00021683|Name=TCONS_00021683|organism=Clytia hemisphaerica|type=transcript|length=1791bp
TTAGAACTGGAGATCGCCCAGAAAGACAGAAAAGAAGtcAAAAAGAACAG
TTTGTCTTCACTTGATTCTCTACAAGACATGAAAGCGAGGCTGGAAGAAT
TGGAAAAAGATTTGAAGGCCAAACGATCTAGAGGAGGTTCGAATGATGAA
AATACCAAACACATGCAAGACGCTATGAAGAAATTAGACGCAGAATTGGA
ACGCCATTCAAAGAGACAAGCATCAAAGAAATCAGCTTCCAGTTTATCCT
TTGATGAACTCATGGACGACATCAGAGAAACAGGAAGTATGCGAGACGAC
TTGAAGAACAAATTTTACAACATTATTGGTTACAAACAATCATCTCAAGA
TGATATCGATCAACATTTCAAACGGGCATATTTGGAAGGCTCTTTGGGAA
GCATTTTGGATCAAATTCGCAACTCTAAACGTGGAAGCCAAAAAGACGAA
ATTTTCCGACGAGAAGATTCCGAATGCAAAGACGTGCGTTCAGATTGTGC
TCGATTGAAGTCGTACTGTGAAAATTACcgtgaaaaattggaaggagctt
GCGATAAAACTTGTCAATACTGtcGTGAATGTAAGAATTCTGGAGCTATA
AGTGACGAAATGTGTGAAAGCCTACGCAAAGAATCGAGAAACAATCCTCA
AGGATTGGATTATTGTTTCATGGATGGTTACACTGATCGAATGAGAAATA
TTTGTTACAAATCGTGTGGTTATTGTAAAGCACCTGCCCCACCAAAATGC
TCTGAAACTCAATACAAATGTTGTTGGGATGACGTCACTACAAAAGTTGA
TAATGCTGGATCTAACTGCCCAGcaTGTGTTGATCAATACAAGTACGCAT
GCACCACTTTCAAGGAGGATTGTTCCAGCCGATACAAACCAGGAGAATTC
ATGCATACTTATTGTCCGGAAACTTGCAACCTTTGTGGTGGAGGATGTTT
GAACGAGCGTGGGTTTGATGAATATTGTGCTTTCTGGAAGACGGATTTGA
ACTGGTGTGtcgaaaatgaagataaaatgCGCCATTACTGTAACAAAGAA
TGTGGATTCTGTTAAACGAGATCTGATTGGTTTAAATCTAAAAGATTGGT
TGATTTACAGGAAAGATAACGTGATTGgcttaaattttgataaaatccat
TGTTATAAACCGATGAACTTTTGGTCGTTTACCGTcatcgttttgtataa
gattcccttTCCCGCACTAATATTCTCCTGGCTCTTCCggaatctttccg
ctattttcCCGGGATAGCCGGCACGAGATTTGACAGGTTTTTCTTCTAAA
GATACGGAAAATTTTGTGTTTACTTACGAAATTTATTTATCTAGCTTTCC
GaagtttatttttcaactacccggaGTTTTGGTCTTTTTCCGTTAGGAAA
GAGGTAGATGCGGGAAAGAGAATCTTATGCACAACAACGGTAATACGTTT
ATCAAACAATCCTTGGTTATACATTGATTTTATTGTCAGTATTATTGTAA
TCTAGAAACCTATTATCTTCGTTTATTATTTGTACATAATGTTTTATTAT
TTAGGAAACTTTGATGAGTTTTAGAATTCTTGAGCTTGGAGCATCGTCGA
AAAAATAATACGGTTATCGCTATAAGTTTAGTATCTGTTAAAAACAGCCA
AAGAACCaaacgagaaaaaaatttatttcgttttatattttcaaattctt
atttttgtgAGCAGAAATTATGTTTTATGAATTTATggttaaaatttttt
gttttaaaatctattttgtttctaataaaattatctttcat
Run BLAST on NCBI

transcript from alignment at sc0000393:17113..30210+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021683 ID=TCONS_00021683|Name=TCONS_00021683|organism=Clytia hemisphaerica|type=transcript|length=13098bp|location=Sequence derived from alignment at sc0000393:17113..30210+ (Clytia hemisphaerica)
TTAGAACTGGAGATCGCCCAGAAAGACAGAAAAGAAGGTATGCtacacaa
aaaatttttttaccataCCGTTCTTTTGACTCTCCTACCAATGTAAAAAG
CTCTTCCGTCTCAGCGAAGTAAATAGGCTTTTCGATCTCAAAATTCATTA
CGTaaattcaagaaaatgtttcaacagaaaaccttgctttgaccacttaA
GCCTAGTTATTGAATGTAAAACCGTATGATCAATCTTTTAAAGTATTATC
CTTTGAGCTGCCTTCTAAAGCCTGATTCCAAATAAATTTCCCCGTGAATT
CCTctttttctgaattttgaatgtttttcacTAACTTCGATTTTATNGCC
TGATTCCAAATAAATTTCCCCGTGAATTCCTctttttctgaattttgaat
gtttttcactaacttcgattttatttttattttatttttattttacagtc
AAAAAGAACAGTTTGTCTTCACTTGATTCTCTACAAGACATGAAAGCGAG
GCTGGAAGAATTGGAAAAAGGTGAGAGaattatttaattttgcgaGGGTA
TGGGTATATCCGAGCCGAATGTCGAGTGTTGactgaaaaattcaaacaaa
ctaTTCGAAATCACATCCTCTTTAGAGGATTTGCTTTATAAAAAACTACT
TTGAAACCTTCACTAAGACTGTCATTCCTTTAAACCCCGGcaccaatttt
aaattttttccgTTTATTCTCCTTCGAACTGAAGGTTAGCATAATTTGAT
ACCTCTTTTCTCTCAAACAAGAGGTTGTAGCACATCGAACTacaattttt
ggtattttgaggtcaatgttttcttttatctttccaCTTTAACCACAAAA
CCAAAGATGTTCACATAGTAACTCatctttgaagtttttgtttgtcaaaa
tgCCAGAACTATGGTATCTTATGTCTAGGTATAAGAAGGCCATAGTTACA
CATAGCTACAACCAATCATCTCATAATCCTCTCCTATCTAACATGGGATT
GATAGGATAGGGTCgttcgtctacttttagtcatttggGCCGATTTTCAG
GGTTAAATTCTGGGAAAAATTCTCGAATTTTGTCTTGCTGACAGGGTCCT
AAATTTGCCAAATATTCATACCTAACAGGGTctatttttcaaactccagc
gacACGTCCTcctcggccgtcaaggtcagtgccccccccccccccgggga
tttTGGAATCATCacttttgttcaaattttgacaAGAAAAATATACGGAT
AAAATCGATAATCGGCCACTTGACCGAAATTTCTACGCTACGAACATGGT
TTTACTGAAGCAGTAAGGCAAGATAAATTTAATTTCTGTTCTACGGGAAA
CCttcagaaaaatatgggtctgtcggtcggtcggtcggtcggtatagtag
aaataaatttctttaaatctaGAGTCGGAAGGTCAAGTTCTAAAAAATAG
TGACGTTTTGAAGtattagactttttcctttcTAACGATGGGCGACATTC
GTGCCATTTCCATTGATATTTTTTAGATTCATCTAAGTTCTTGGATGCAT
TTACACtttttcaacttgttcagtTAAAATTATCTGCAAAAAAACTCATA
AAGTTCATTCTTCCTTCACCTTTGCAAATTTaatgttattaattttcgat
tttggaaaaagCAGGGTCGATCGGGCCCGTAGAGCAATAACTTAGATTGG
TCTCGCATAATTAAGTCATTATAACCTGCCAACCTATATATTTTTTATGG
TTCAGATCCTAGAGAAAGTTTCCCCGCCTTTGCAAGTTGTAATTTGATTT
GAGGAGGCCTTTCTGTCTTGACTGTTAAAAAGGAAAACACCTTGTTATTG
CCATGTAAATCTTGTCAAAGTGTCTAGAATGTTAAAGAATTGGAAAGTTA
TTTTAAACAAGGGTCAACGTGAGGGTCATACGTCACATATTTTTATGATG
ACTatgagaaagaggaaaaatagaCCACgtattatttttgtaaatttaat
gCCGTCTGTAAAATAATATGACCTTTGCAAACGCCTGAAGAATACTCTCT
GCGTGATTTTGAACCTGAAAAAGcaaactgttttaaatttatactttttt
gtcatggactttaaaaaaaaaaagttcacaaaaatattttaaaatgtgAC
TTTTTCAGAGGCTTTTTTAGTCAAACCTACCGAGGTTCTGAAAACTTTGG
ACTTTGTAAGACCAAGTCACCTTTTTCGCAGTGAGAGGCTTGAACCCCCG
CCCtcgccctcgttttcggggatcgGCGGGTCATACTGCAATATTTCCTA
GCTTATGTATTAGAGCTTTTGAATGGGGTTATGACAGATCAAAGTCTATC
ATTCCTCTTCGATAGGTAATCGACCCGCGCGTTCAAAGCTTTAGCATGGG
CAGCCGTCAATCTACCATTTATTATCAGATAATTCGAAGGAAATACGCTT
TTAATTAAATTGTATCGGAGAAAACGGAATTTCAATTCGAAACAGACCGG
AAAATGTTAGACAGAAAAATGGtaggaaaaatattaaaatgtatCAAGTT
ACGAATTGTTATTTCGCCGCTGTGAACTCGCTGAGacgaatttcgaaatc
caaggGTTAATTTTCTTCGTGGCTCATGAGAGTTTAATCTGGTAGGCTCT
GCTCATCTTATACAGCTAAAAAGCTTCGTATAGGAAGTATAGGTCTGTGG
GTGTGAGTATTGTGAGTGACAAACTCAATAAATGTTGGTGGAGCTAAAAA
AATCGGCTAAACTTACACAATTTTCCTGTTTTCTCTTTTCATTGGATTTT
GTTTTTAGTCACTCCTGATAACCAAATCAAATGATCTACATTGATCAACA
TGGTGGACTTAATACTTTCTAAATCCTTATTTTAATCCTATGTTAGTTTT
TAACAACTCATAAATGACGACCgtttaataaaaacatttatatTTTGTCA
AACTTAAAAATAACCTACATTTTTTATGAACAGTTTTTACTAGAGCGCCA
AAATCATTGAACAAATTAGAGAAAAATACTATTACCCAGATTTCAAAATT
AGCTAAGTAAGCTGAAGTAAGTCATATTTTGAGAAgattttaagcctgaa
aatcacgaaaaataaGAGTAGCTGAGCCTCAGCTAAAATtgactggttct
tataaaaaatgtggtGGGGTAGAGTCTTGATAACTCGAAAGCTCATGGGa
aacgcaaatttgttcgagttaaaaaacTTTCGAGTTATGCAGACTAGTTT
AAGGCATTGTTGACTGAAGGGACGatcaaacttgttcgagttaagaagac
atttgaataaaagaagttcgAGATTCCGCTGTATTTTCACAATCAGTTAT
AAAAGTTATTTCGTGTacataaaaaatctgaaaataatcTAGTAGACAAA
CGGTAAAGAAATTTGTCTAATGAAGACTACATGTATTGTCATTTGGTATC
ACGTATCTCTGTGTTTGACAAATGACTGGGCTAAGTGATATATAAATTCA
AacagtttgttttcaaattcaaacatTAGATTGTTTTTTTAACCAAATTG
TTTGCTTTGACATTGTTCATAAAACACAAAAGTTTGTCCAAGCAATAGAC
GGCTTCTATGATATTACTATTACTACTTATGTGATAGAGTTTCCATAAGG
CCAAAACCAGCCATAGAGCTAAACATTAGATGGAAAATTTGTACTATAAT
ATAcaacacacccccttctcacggCAGACCCACTGGGGgcccttcccact
gaaaaattggccaaaatatcatcccaGTGGGAAATGATTCTCCAATTTCT
GTCCCCACtgataataatcaaataaaccaatcctcattgcaaaatattat
gctattttcccaCCCCACTGAATtctttgacttgaaaacaaaagcatTTA
AATCTCCAGCCATAAAGATTACAGTATGGgtatatcaatccccatcgagt
ttaaaaaaaaaccgagaaaatatcctaccgggtctgtgaggaGGGGGTGT
TACAACGAttacactacacgttttttggacataccgggaggtcctttaat
ttgaccgttgtccgttcgtctgttctgttacaagcttttctcgggattgg
ctcattagttttttttaatattttgcacaatgatacaaaatagcaatggc
tgtaaagtgacggagcccgatttttgaaaaaaaattttggggggcaaatt
agggccaaaaactacctaaaaattaggttttttggacttggtgcaaaatt
gcttcattagtttttcNaaaataaggttttttggactttgtgcaaaattg
cttcattagtttttcctgatttttggcagaaagatagagtgcaaggtacc
ctaaaatgtggctgaagtagtttttctcggaaaattttttttcgtcgtca
aatacggattttcgcaaatttgggccaaaaactacctaaaaatagggttt
tttggacttggtACAAAATTGCTTCATTAGTTTTTCCTGATTTTTGGCAG
AAAGATAGAGTGcaaggtaccctaaaatgtggctgaagtaatttttctcg
gaaaattttttttcgtcgtaaaatacggattttcgttttttggggaaatt
cccttttaccatttgcCTGTTagtagcttttctcgggattggctcattag
ttttttttcattttttgcataatgatacaaaatagcaatgcctaaaaagt
gacggagcccgatctttgaaaaaaattttggggggcatatttgggccaaa
aactacctaaaaataaggttttttggactttgtgcaaaattgcttcatta
gtttttcctgatttttggcagaaagatagagtgcaaggtaccctaaaata
tggctgaagtaatttttctcggaaaatttttttcgtcgtcaatacggatt
ttcgcaaatttgggccaaaaactacctaaaaaaaaggttttttggacttt
gcgcaaaattgcttcattagtttttcctgatttttggcagaaagatagag
tgcaaggtaccctaaaatatggctgaagtaatttttctcggaaaattttt
ttcgtcgtcaatacggattttcgcaaatttgggccaaaaactacctaaaa
aataaggttttttggactttgtgcaaaattgcttcattagtttttcctga
tttttggcagaaagatagagtgcaaggtaccctaaaatatggctgaagta
atttttctcggaaaatttttttcgtcgtaaaatacggattttagcaagtt
tgggccaaaaaatacctaaaaataagttttttttgaacttggtgcaaaat
tgcttcattagtttttcctgatttttggcagaaagatggagAGAGCCAGA
ttctctaaaaagtgactgaagcagttttttttcggaaaattttctttggc
cgtaaaaatcggattttcttatttggggaaactcccttttgtcatattta
gggaaaatgagcatttctcgagattggcttggtgtttttttcttattttt
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtg
gtaatatttaatttctgatggagcctgattttcgaaaaaataattttttg
agcaaatttgggcagaaaagtgcctatattcaagctgctcattaCACTTT
CTTATACTCTCTTGCTTTTTgttctatttttatctgattttgatcaccag
gtaggtccgttcagcatgttgcttgttttttaagaaatacacttttaaga
aacatgagacTCAAAATGCCTAAAActtaagaaacatctaagaaacatgc
tgaggctgagaatgagaaaataacattttttaattcggttttttttaaga
accttccaatcaaaacaaatgtgtttttttctttgcatgaaaaataggct
gattatgtcaaaaaagaAACATTAAGGCTGCTttgtaaaactagtttctt
taaaaaaaaagctgTAAACCTTAAAAATCATCTGCAAAGTGTCACCGGGA
AATGGGTTGAATTTTCTACTTCATAAGTCTAAAATACTTCAAAAGGAAGT
CATGGAACCATTAAAAGGCCTAGATAACTTTAACCTTTTAGAAGGAATTT
AAATTTAATCTTTGGGATAGACTGATCCGTTTATTTATTACATCTCTCTT
AACATTCTATCTCTACCCCTTCGCTTAAAATTAAcggtttaaaaatttct
ttctccCCCAGATTTGAAGGCCAAACGATCTAGAGGAGGTTCGAATGATG
AAAATACCAAACACATGCAAGACGCTATGAAGAAATTAGACGCAGGTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNctgattatgtcaaaaaagaAACATTAA
GGCTGCTttgtaaaactagtttctttaaaaaaaaagctgTAAACCTTAAA
AATCATCTGCAAAGTGTCACCGGGAAATGGGTTGAATTTTCTACTTCATA
AGTCTAAAATACTTCAAAAGGAAGTCATGGAACCATTAAAAGGCCTAGAT
AACTTTAACCTTTTAGAAGGAATTTAAATTTAATCTTTGGGATAGACTGA
TCCGTTTATTTATTACATCTCTCTTAACATTCTATCTCTACCCCTTCGCT
TAAAATTAAcggtttaaaaatttctttctccCCCAGATTTGAAGGCCAAA
CGATCTAGAGGAGGTTCGAATGATGAAAATACCAAACACATGCAAGACGC
TATGAAGAAATTAGACGCAGgttgatatttcattttttcatatatttttc
ttataCCTAGGAAGACTCAATTAGGTAAAATTTAGTTCGTTTTCTTTGCA
ACATCGAACTTTGAAGCTACTCGGCAACTATATTATACATCGAGCTTTGG
TCGGATCTGTTTTTAGCCTTCATTTAGACAATCGGGATCTTGTTAAGGTA
GTTAAGGTCTAGTTAAGGTCTTGTTTCACCCTAAAACAGATCCTCGAAGT
TTTGCTTCTTCAATATCCATCGCTAAAAAAGGATAGGGGGCAGATTCAAT
GTTATTAATGCAGGGGGTTaaatcattttcagacattaagTGGTAGTTTG
ATAGAATTTAAGAGatgaaaattctaaattttttggtgtttccTGTAAAA
GTTAAGAAGAAAACTTTAACCACTTCCCCAACTGTGAAACATCATGGGTA
CGCTTTTGGAGGGGGAGAGGTTGACATATACCAGTTATATTGTTTTATTG
AACAAAACTAAACTCAATTAACAAAGACCGCTGCTctatttatatattta
ttttaggatttttattttcttactttttactgCTAGAATTGGAACGCCAT
TCAAAGAGACAAGCATCAAAGAAATCAGCTTCCAGTTTATCCTTTGATGA
ACTCATGGACGACATCAGAGAAACAGGTTTGTAGCATTTCCAAGGCCTTC
TCGACCTTCTCGACCTTCGCGATTGtctaaattgctttacattcattaga
ctagagtctacatttggctgaactttgctttttgataattttttatgacg
ctgagtccagtgaagtaatcgcgccatccagtctataaaaaagctttaaa
ttgGACCCCGGGCTTTACATTCATCTACTAAAAGATCGATGCGTGCATCA
ACTCGGACCCAGTCCTCTTCAGCTAGATCCACTTGCATGTATCTTCtcaa
caatagaccttttcataaattacgttacgaacatcacttgcctcgttttg
aaattattgccatggtgagtaactcccagcggatttcattaaaactactt
tctattcatgaaaaaatcatttaatgtctcaagggacataatcaccatgg
taattttttgaatacgaggcaagtgatgttcgtgacgtaatttatgaaaa
gctcTTTACTGACAACATTTTCTCTTTCATTATAGGAAGTATGCGAGACG
ACTTGAAGAACAAATTTTACAACATTATTGGTTACAAACAATCATCTCAA
GATGATATCGATCAACATTTCAAACGTGAGTTATCACAACGTCAAGTTGA
CATTCATTTAACGTTCAAAAGCGTTACACTCCGTTATTTCTGAACAATCT
TTTCTAACGACTCATTTGAATTCCAGGAAATATCTTGAAACTCTGGTCTA
TTATGTGGATTATGGcgcctccttctcacagaccaacgGGGACCCCTTCc
caatggaaaaattggccaagtATCGTCCCCATTGGAAAATTATACTACGA
TGAGTTTTtctcccgctgaaaataatcaaataagcaaatcctcactgcaa
aatactgTGCTATTCTTTCCATCCTCACTGAGTTTTATGGCTCAAAAGCA
AtgaaattcaaatccccagccttTAAAAACACCTGAAAATCGATCCCCAT
Cgcgttttggtccgttatttttatccccactggctgaaaaaatcctaccg
ggtctgtgagaagggggtgtattatgTAGAAAAAGTCGAAATTACGCCCA
TGATAGGAGAAGGTTGAAAAAACGTTTCTCGGCTTCTGTCAAGGTTATAA
AAATGATGGCTGGATCTTAAttaagcgaccgtagtgcaatggtagagcat
ccggcaaCAGTTTGCatggttgtgggttcaacctcCAGCCGAGTCATAcc
aaatttccaaaatggtacttgatgcctctctgcttgatgctcagcaatta
agagaaagatcaagggtaagtggagaaatctagGGAAAAAAAGTGGCGCT
ctcccctaccttcaggtagatagctatGGAAAGAGGagtcttcgggtcgc
ctccgactgtagtcacagacttacttactacttacttagCTCTCAATTAG
AAATCCTTCGTAAAGCTTCGCTCTTTAATTTGATAATCATATAAATCATT
TATTCTAGGGGCATATTTGGAAGGCTCTTTGGGAAGCATTTTGGATCAAA
TTCGCAACTCTAAACGTGGAAGCCAAAAAGGTAGgtctattttttttatt
taataatCTGAAATTTGCAACTGTGGTTTTCTGTTATGCGAAAGTTTAAT
CCTAAAAGTTGGTACTTATTTGTATCTTTGGTACTTATTTGTATCTTTGG
TACTTATTTGTATCTTTGGTACGGTAGACCTTCGGAAGTATTCCAGTCAA
CGCTTGGTGTGTCCTTAGTGACACTGTTTGTGTTGTTGCTATGATACGCC
TTATATGTCTGTAACGGTCCCAGCGCAGTGACATGTATGGTTGTTGTTGT
ACCAGGttttatcaacaaaaaaaaaccgCAGCAAAACCTCAAAGTAGCTT
TGAAGATAATCGACCTTTCAATAATTCGCAACTTTTAATTGCATGTAcca
ttttttaagaatattttcattttttttcaccaaTAGACGAAATTTTCCGA
CGAGAAGATTCCGAATGCAAAGACGTGCGTTCAGATTGTGCTCGATTGAA
GTCGTACTGTGAAAATTACcgtgaaaaattggaaggagcttGCGATAAAA
CTTGTCAATACTGtcgtaagtttttttttaagttttcgaTAATTTAGGGA
TAGTAGCAAAGCATTGCAATTCCATGTTGTTAATGAAATAAATGATATGC
TTTGAGAATAAGTTATTTAGTTTTTATAGTAGAAAACTTAAAATGTAGAA
GCAACAAATTAATAAGACTGAATATGTGTGAATATAAGTGTACTGGGTCT
AGGTTCGCTCCGATTATAGTCTATGTAAACTAACGACActattatttttt
tccattcCAACTTTACTCTCTGATAAGATCTCGGGGATTTGGAAATTATC
GTAAAATAAACAAACGGGGGTAgggcgtttattaggcaccaAAGAGTACa
cattgaaaaaatataaaaaacggtATAAGTATATAAAGATCAGCTTTTAG
TGTCATAGTGAAACGCAACGCTCAAAAATAAGTTCCGTTAAAGGTATATC
ACAACTGCTTGTATTTTTTAGGTGAATGTAAGAATTCTGGAGCTATAAGT
GACGAAATGTGTGAAAGCCTACGCAAAGAATCGAGAAACAATCCTCAAGG
ATTGGATTATTGTTTCATGGATGGTTACACTGATCGAATGAGAAATATTT
GTTACAAATCGTGTGGTTATTGTAAAGCACCTGCCCCACCAAAATGCTCT
GAAACTCAATACAAATGTTGTTGGGATGACGTCACTACAAAAGTTGATAA
TGCTGGATCTAACTGCCCAGGTAATAAAGCGACAGATTATCACTGCCTTG
GAAATCATATGTATAGAAGATGATTCCATAGTCCGAAAAAATGGTCCCTT
TTATTAAGGTACTTcgactattcatgatatgcaccattgatTTCTCTTCa
accacggacccaacagctgattggttgcaagtgaagtgttgactgatttt
acgtcacttacaaccaatcagctattggttccgtgatgtaataggccatt
tcacaatcgaaatgaatcatgggtaatcaggactgattgcacCTCAATAA
CAACTTCTCGTTCAATAACAGCAGAcgcaaaaacatccaaaattttagac
AAACAGAAAGTCGTTATCACTGCGgggtggtcctgattacccatgattca
tttcgactgtgaaatggcctattagaagacattgcattgacgcgTATCAT
AAATTAAAGGAATGTTTTGTTTGTTCACTATGTGCCTGTAGGCGTCTTAA
GACTATGGTTAAAAGTGTTCAGCGTTATTTGACTTAGGGTACCCGTTTAG
ATCCACAACCTTCATGTTCTGGATGGAGCTCGTGAAATCAACAATTGAAA
GACCATTCCTCgatttcaaccaatagaaaggCATTATCTAACATTTcctt
ctcttttcttttctagcaTGTGTTGATCAATACAAGTACGCATGCACCAC
TTTCAAGGAGGATTGTTCCAGCCGATACAAACCAGGAGAATTCATGCATA
CTTATTGTCCGGAAACTTGCAACCTTTGTGGTGGTATGTAGCTTTCATAA
ACTTCCTTTTAAGTATACTAATTTAGGTGTGTATTTATTTTGCCGTTTTG
CCGTTTGGCCAAAATGTGATTTTTGGagggtatttaatttggcagatggg
gAAATTTTAGGCATTTCTATTTAAAAAATACTTGgaattttaacagtttt
tacaTAAAAAGGCTGACATCATATATAATTTTTACCCtaaaagatttttg
ttaaatttgactGGCATTTGCATTTACTTTGGCGGCTCTTACCAACAACG
AACTTTGTTCCGCGAATCATCATGAATGACTAACAGTTCGCGAAAAGTTA
TTTTcacaaaatacaaattttctatttcctTACCAAATGCCAATTGGGCG
GTGACTATAATcctttcaagtcaaaaaaaaaaaaacatttcttgaaaacc
actggaaaatggcaaaatttacatccttgcaaaattattttttcatacta
CACCCCCTGGAAACGCGTTCATCCACCTCCCTGTATGAATATAAGATGGC
CCATTATAACACTGAagagattataaaaatattttccgatTTTACAGGAG
GATGTTTGAACGAGCGTGGGTTTGATGAATATTGTGCTTTCTGGAAGACG
GATTTGAACTGGTGTGtcgaaaatgaagataaaatgCGCCATTACTGTAA
CAAAGAATGTGGATTCTGTTAAACGAGATCTGATTGGTTTAAATCTAAAA
GATTGGTTGATTTACAGGAAAGATAACGTGATTGgcttaaattttgataa
aatccatTGTTATAAACCGATGAACTTTTGGTCGTTTACCGTcatcgttt
tgtataagattcccttTCCCGCACTAATATTCTCCTGGCTCTTCCggaat
ctttccgctattttcCCGGGATAGCCGGCACGAGATTTGACAGGTTTTTC
TTCTAAAGATACGGAAAATTTTGTGTTTACTTACGAAATTTATTTATCTA
GCTTTCCGaagtttatttttcaactacccggaGTTTTGGTCTTTTTCCGT
TAGGAAAGAGGTAGATGCGGGAAAGAGAATCTTATGCACAACAACGGTAA
TACGTTTATCAAACAATCCTTGGTTATACATTGATTTTATTGTCAGTATT
ATTGTAATCTAGAAACCTATTATCTTCGTTTATTATTTGTACATAATGTT
TTATTATTTAGGAAACTTTGATGAGTTTTAGAATTCTTGAGCTTGGAGCA
TCGTCGAAAAAATAATACGGTTATCGCTATAAGTTTAGTATCTGTTAAAA
ACAGCCAAAGAACCaaacgagaaaaaaatttatttcgttttatattttca
aattcttatttttgtgAGCAGAAATTATGTTTTATGAATTTATggttaaa
attttttgttttaaaatctattttgtttctaataaaattatctttcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012170XLOC_012170Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021683-exon-sc0000393-1491911889:17113..17149TCONS_00021683-exon-sc0000393-1491911889:17113..17149Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:17113..17149TCONS_00021683-exon-sc0000393-1510915933:17113..17149Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:17113..17149TCONS_00021683-exon-sc0000393-1575043694:17113..17149Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:17561..17632TCONS_00021683-exon-sc0000393-1491911889:17561..17632Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:17561..17632TCONS_00021683-exon-sc0000393-1510915933:17561..17632Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:17561..17632TCONS_00021683-exon-sc0000393-1575043694:17561..17632Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:23424..23476TCONS_00021683-exon-sc0000393-1491911889:23424..23476Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:23424..23476TCONS_00021683-exon-sc0000393-1510915933:23424..23476Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:23424..23476TCONS_00021683-exon-sc0000393-1575043694:23424..23476Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:24552..24582TCONS_00021683-exon-sc0000393-1491911889:24552..24582Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:24552..24582TCONS_00021683-exon-sc0000393-1510915933:24552..24582Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:24552..24582TCONS_00021683-exon-sc0000393-1575043694:24552..24582Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:25149..25238TCONS_00021683-exon-sc0000393-1491911889:25149..25238Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:25149..25238TCONS_00021683-exon-sc0000393-1510915933:25149..25238Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:25149..25238TCONS_00021683-exon-sc0000393-1575043694:25149..25238Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:25748..25837TCONS_00021683-exon-sc0000393-1491911889:25748..25837Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:25748..25837TCONS_00021683-exon-sc0000393-1510915933:25748..25837Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:25748..25837TCONS_00021683-exon-sc0000393-1575043694:25748..25837Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:26721..26792TCONS_00021683-exon-sc0000393-1491911889:26721..26792Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:26721..26792TCONS_00021683-exon-sc0000393-1510915933:26721..26792Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:26721..26792TCONS_00021683-exon-sc0000393-1575043694:26721..26792Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:27199..27327TCONS_00021683-exon-sc0000393-1491911889:27199..27327Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:27199..27327TCONS_00021683-exon-sc0000393-1510915933:27199..27327Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:27199..27327TCONS_00021683-exon-sc0000393-1575043694:27199..27327Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:27784..28032TCONS_00021683-exon-sc0000393-1491911889:27784..28032Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:27784..28032TCONS_00021683-exon-sc0000393-1510915933:27784..28032Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:27784..28032TCONS_00021683-exon-sc0000393-1575043694:27784..28032Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:28679..28795TCONS_00021683-exon-sc0000393-1491911889:28679..28795Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:28679..28795TCONS_00021683-exon-sc0000393-1510915933:28679..28795Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:28679..28795TCONS_00021683-exon-sc0000393-1575043694:28679..28795Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1491911889:29360..30210TCONS_00021683-exon-sc0000393-1491911889:29360..30210Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1510915933:29360..30210TCONS_00021683-exon-sc0000393-1510915933:29360..30210Clytia hemisphaericaexon
TCONS_00021683-exon-sc0000393-1575043694:29360..30210TCONS_00021683-exon-sc0000393-1575043694:29360..30210Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:17113..30210 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.600461	0.491309	6.32297e-06	0.48515	0	0	0	0	7.27293	3.96807	6.4642	7.52304	8.70793	13.6581	10.6692	13.575	8.87508	12.0615	24.0085	37.658	24.1414	18.4721	15.4142	13.8179	0	0	70.8493	57.5553	0.664217	11.4399
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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