TCONS_00021681 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021681
Unique NameTCONS_00021681
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1854

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021681 ID=TCONS_00021681|Name=TCONS_00021681|organism=Clytia hemisphaerica|type=transcript|length=1854bp
GCTAAGACTAGATCATAACCATTCgtactttctttttataaataacATCC
ATCATTTGTATTTTTAGAACTGGAGATCGCCCAGAAAGACAGAAAAGAAG
tcAAAAAGAACAGTTTGTCTTCACTTGATTCTCTACAAGACATGAAAGCG
AGGCTGGAAGAATTGGAAAAAGATTTGAAGGCCAAACGATCTAGAGGAGG
TTCGAATGATGAAAATACCAAACACATGCAAGACGCTATGAAGAAATTAG
ACGCAGAATTGGAACGCCATTCAAAGAGACAAGCATCAAAGAAATCAGCT
TCCAGTTTATCCTTTGATGAACTCATGGACGACATCAGAGAAACAGGAAG
TATGCGAGACGACTTGAAGAACAAATTTTACAACATTATTGGTTACAAAC
AATCATCTCAAGATGATATCGATCAACATTTCAAACGGGCATATTTGGAA
GGCTCTTTGGGAAGCATTTTGGATCAAATTCGCAACTCTAAACGTGGAAG
CCAAAAAGACGAAATTTTCCGACGAGAAGATTCCGAATGCAAAGACGTGC
GTTCAGATTGTGCTCGATTGAAGTCGTACTGTGAAAATTACcgtgaaaaa
ttggaaggagcttGCGATAAAACTTGTCAATACTGtcGTGAATGTAAGAA
TTCTGGAGCTATAAGTGACGAAATGTGTGAAAGCCTACGCAAAGAATCGA
GAAACAATCCTCAAGGATTGGATTATTGTTTCATGGATGGTTACACTGAT
CGAATGAGAAATATTTGTTACAAATCGTGTGGTTATTGTAAAGCACCTGC
CCCACCAAAATGCTCTGAAACTCAATACAAATGTTGTTGGGATGACGTCA
CTACAAAAGTTGATAATGCTGGATCTAACTGCCCAGcaTGTGTTGATCAA
TACAAGTACGCATGCACCACTTTCAAGGAGGATTGTTCCAGCCGATACAA
ACCAGGAGAATTCATGCATACTTATTGTCCGGAAACTTGCAACCTTTGTG
GTGGAGGATGTTTGAACGAGCGTGGGTTTGATGAATATTGTGCTTTCTGG
AAGACGGATTTGAACTGGTGTGtcgaaaatgaagataaaatgCGCCATTA
CTGTAACAAAGAATGTGGATTCTGTTAAACGAGATCTGATTGGTTTAAAT
CTAAAAGATTGGTTGATTTACAGGAAAGATAACGTGATTGgcttaaattt
tgataaaatccatTGTTATAAACCGATGAACTTTTGGTCGTTTACCGTca
tcgttttgtataagattcccttTCCCGCACTAATATTCTCCTGGCTCTTC
CggaatctttccgctattttcCCGGGATAGCCGGCACGAGATTTGACAGG
TTTTTCTTCTAAAGATACGGAAAATTTTGTGTTTACTTACGAAATTTATT
TATCTAGCTTTCCGaagtttatttttcaactacccggaGTTTTGGTCTTT
TTCCGTTAGGAAAGAGGTAGATGCGGGAAAGAGAATCTTATGCACAACAA
CGGTAATACGTTTATCAAACAATCCTTGGTTATACATTGATTTTATTGTC
AGTATTATTGTAATCTAGAAACCTATTATCTTCGTTTATTATTTGTACAT
AATGTTTTATTATTTAGGAAACTTTGATGAGTTTTAGAATTCTTGAGCTT
GGAGCATCGTCGAAAAAATAATACGGTTATCGCTATAAGTTTAGTATCTG
TTAAAAACAGCCAAAGAACCaaacgagaaaaaaatttatttcgttttata
ttttcaaattcttatttttgtgAGCAGAAATTATGTTTTATGAATTTATg
gttaaaattttttgttttaaaatctattttgtttctaataaaattatctt
tcat
Run BLAST on NCBI

transcript from alignment at sc0000393:17050..30210+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021681 ID=TCONS_00021681|Name=TCONS_00021681|organism=Clytia hemisphaerica|type=transcript|length=13161bp|location=Sequence derived from alignment at sc0000393:17050..30210+ (Clytia hemisphaerica)
GCTAAGACTAGATCATAACCATTCgtactttctttttataaataacATCC
ATCATTTGTATTTTTAGAACTGGAGATCGCCCAGAAAGACAGAAAAGAAG
GTATGCtacacaaaaaatttttttaccataCCGTTCTTTTGACTCTCCTA
CCAATGTAAAAAGCTCTTCCGTCTCAGCGAAGTAAATAGGCTTTTCGATC
TCAAAATTCATTACGTaaattcaagaaaatgtttcaacagaaaaccttgc
tttgaccacttaAGCCTAGTTATTGAATGTAAAACCGTATGATCAATCTT
TTAAAGTATTATCCTTTGAGCTGCCTTCTAAAGCCTGATTCCAAATAAAT
TTCCCCGTGAATTCCTctttttctgaattttgaatgtttttcacTAACTT
CGATTTTATNGCCTGATTCCAAATAAATTTCCCCGTGAATTCCTcttttt
ctgaattttgaatgtttttcactaacttcgattttatttttattttattt
ttattttacagtcAAAAAGAACAGTTTGTCTTCACTTGATTCTCTACAAG
ACATGAAAGCGAGGCTGGAAGAATTGGAAAAAGGTGAGAGaattatttaa
ttttgcgaGGGTATGGGTATATCCGAGCCGAATGTCGAGTGTTGactgaa
aaattcaaacaaactaTTCGAAATCACATCCTCTTTAGAGGATTTGCTTT
ATAAAAAACTACTTTGAAACCTTCACTAAGACTGTCATTCCTTTAAACCC
CGGcaccaattttaaattttttccgTTTATTCTCCTTCGAACTGAAGGTT
AGCATAATTTGATACCTCTTTTCTCTCAAACAAGAGGTTGTAGCACATCG
AACTacaatttttggtattttgaggtcaatgttttcttttatctttccaC
TTTAACCACAAAACCAAAGATGTTCACATAGTAACTCatctttgaagttt
ttgtttgtcaaaatgCCAGAACTATGGTATCTTATGTCTAGGTATAAGAA
GGCCATAGTTACACATAGCTACAACCAATCATCTCATAATCCTCTCCTAT
CTAACATGGGATTGATAGGATAGGGTCgttcgtctacttttagtcatttg
gGCCGATTTTCAGGGTTAAATTCTGGGAAAAATTCTCGAATTTTGTCTTG
CTGACAGGGTCCTAAATTTGCCAAATATTCATACCTAACAGGGTctattt
ttcaaactccagcgacACGTCCTcctcggccgtcaaggtcagtgcccccc
ccccccccggggatttTGGAATCATCacttttgttcaaattttgacaAGA
AAAATATACGGATAAAATCGATAATCGGCCACTTGACCGAAATTTCTACG
CTACGAACATGGTTTTACTGAAGCAGTAAGGCAAGATAAATTTAATTTCT
GTTCTACGGGAAACCttcagaaaaatatgggtctgtcggtcggtcggtcg
gtcggtatagtagaaataaatttctttaaatctaGAGTCGGAAGGTCAAG
TTCTAAAAAATAGTGACGTTTTGAAGtattagactttttcctttcTAACG
ATGGGCGACATTCGTGCCATTTCCATTGATATTTTTTAGATTCATCTAAG
TTCTTGGATGCATTTACACtttttcaacttgttcagtTAAAATTATCTGC
AAAAAAACTCATAAAGTTCATTCTTCCTTCACCTTTGCAAATTTaatgtt
attaattttcgattttggaaaaagCAGGGTCGATCGGGCCCGTAGAGCAA
TAACTTAGATTGGTCTCGCATAATTAAGTCATTATAACCTGCCAACCTAT
ATATTTTTTATGGTTCAGATCCTAGAGAAAGTTTCCCCGCCTTTGCAAGT
TGTAATTTGATTTGAGGAGGCCTTTCTGTCTTGACTGTTAAAAAGGAAAA
CACCTTGTTATTGCCATGTAAATCTTGTCAAAGTGTCTAGAATGTTAAAG
AATTGGAAAGTTATTTTAAACAAGGGTCAACGTGAGGGTCATACGTCACA
TATTTTTATGATGACTatgagaaagaggaaaaatagaCCACgtattattt
ttgtaaatttaatgCCGTCTGTAAAATAATATGACCTTTGCAAACGCCTG
AAGAATACTCTCTGCGTGATTTTGAACCTGAAAAAGcaaactgttttaaa
tttatacttttttgtcatggactttaaaaaaaaaaagttcacaaaaatat
tttaaaatgtgACTTTTTCAGAGGCTTTTTTAGTCAAACCTACCGAGGTT
CTGAAAACTTTGGACTTTGTAAGACCAAGTCACCTTTTTCGCAGTGAGAG
GCTTGAACCCCCGCCCtcgccctcgttttcggggatcgGCGGGTCATACT
GCAATATTTCCTAGCTTATGTATTAGAGCTTTTGAATGGGGTTATGACAG
ATCAAAGTCTATCATTCCTCTTCGATAGGTAATCGACCCGCGCGTTCAAA
GCTTTAGCATGGGCAGCCGTCAATCTACCATTTATTATCAGATAATTCGA
AGGAAATACGCTTTTAATTAAATTGTATCGGAGAAAACGGAATTTCAATT
CGAAACAGACCGGAAAATGTTAGACAGAAAAATGGtaggaaaaatattaa
aatgtatCAAGTTACGAATTGTTATTTCGCCGCTGTGAACTCGCTGAGac
gaatttcgaaatccaaggGTTAATTTTCTTCGTGGCTCATGAGAGTTTAA
TCTGGTAGGCTCTGCTCATCTTATACAGCTAAAAAGCTTCGTATAGGAAG
TATAGGTCTGTGGGTGTGAGTATTGTGAGTGACAAACTCAATAAATGTTG
GTGGAGCTAAAAAAATCGGCTAAACTTACACAATTTTCCTGTTTTCTCTT
TTCATTGGATTTTGTTTTTAGTCACTCCTGATAACCAAATCAAATGATCT
ACATTGATCAACATGGTGGACTTAATACTTTCTAAATCCTTATTTTAATC
CTATGTTAGTTTTTAACAACTCATAAATGACGACCgtttaataaaaacat
ttatatTTTGTCAAACTTAAAAATAACCTACATTTTTTATGAACAGTTTT
TACTAGAGCGCCAAAATCATTGAACAAATTAGAGAAAAATACTATTACCC
AGATTTCAAAATTAGCTAAGTAAGCTGAAGTAAGTCATATTTTGAGAAga
ttttaagcctgaaaatcacgaaaaataaGAGTAGCTGAGCCTCAGCTAAA
ATtgactggttcttataaaaaatgtggtGGGGTAGAGTCTTGATAACTCG
AAAGCTCATGGGaaacgcaaatttgttcgagttaaaaaacTTTCGAGTTA
TGCAGACTAGTTTAAGGCATTGTTGACTGAAGGGACGatcaaacttgttc
gagttaagaagacatttgaataaaagaagttcgAGATTCCGCTGTATTTT
CACAATCAGTTATAAAAGTTATTTCGTGTacataaaaaatctgaaaataa
tcTAGTAGACAAACGGTAAAGAAATTTGTCTAATGAAGACTACATGTATT
GTCATTTGGTATCACGTATCTCTGTGTTTGACAAATGACTGGGCTAAGTG
ATATATAAATTCAAacagtttgttttcaaattcaaacatTAGATTGTTTT
TTTAACCAAATTGTTTGCTTTGACATTGTTCATAAAACACAAAAGTTTGT
CCAAGCAATAGACGGCTTCTATGATATTACTATTACTACTTATGTGATAG
AGTTTCCATAAGGCCAAAACCAGCCATAGAGCTAAACATTAGATGGAAAA
TTTGTACTATAATATAcaacacacccccttctcacggCAGACCCACTGGG
GgcccttcccactgaaaaattggccaaaatatcatcccaGTGGGAAATGA
TTCTCCAATTTCTGTCCCCACtgataataatcaaataaaccaatcctcat
tgcaaaatattatgctattttcccaCCCCACTGAATtctttgacttgaaa
acaaaagcatTTAAATCTCCAGCCATAAAGATTACAGTATGGgtatatca
atccccatcgagtttaaaaaaaaaccgagaaaatatcctaccgggtctgt
gaggaGGGGGTGTTACAACGAttacactacacgttttttggacataccgg
gaggtcctttaatttgaccgttgtccgttcgtctgttctgttacaagctt
ttctcgggattggctcattagttttttttaatattttgcacaatgataca
aaatagcaatggctgtaaagtgacggagcccgatttttgaaaaaaaattt
tggggggcaaattagggccaaaaactacctaaaaattaggttttttggac
ttggtgcaaaattgcttcattagtttttcNaaaataaggttttttggact
ttgtgcaaaattgcttcattagtttttcctgatttttggcagaaagatag
agtgcaaggtaccctaaaatgtggctgaagtagtttttctcggaaaattt
tttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactacct
aaaaatagggttttttggacttggtACAAAATTGCTTCATTAGTTTTTCC
TGATTTTTGGCAGAAAGATAGAGTGcaaggtaccctaaaatgtggctgaa
gtaatttttctcggaaaattttttttcgtcgtaaaatacggattttcgtt
ttttggggaaattcccttttaccatttgcCTGTTagtagcttttctcggg
attggctcattagttttttttcattttttgcataatgatacaaaatagca
atgcctaaaaagtgacggagcccgatctttgaaaaaaattttggggggca
tatttgggccaaaaactacctaaaaataaggttttttggactttgtgcaa
aattgcttcattagtttttcctgatttttggcagaaagatagagtgcaag
gtaccctaaaatatggctgaagtaatttttctcggaaaatttttttcgtc
gtcaatacggattttcgcaaatttgggccaaaaactacctaaaaaaaagg
ttttttggactttgcgcaaaattgcttcattagtttttcctgatttttgg
cagaaagatagagtgcaaggtaccctaaaatatggctgaagtaatttttc
tcggaaaatttttttcgtcgtcaatacggattttcgcaaatttgggccaa
aaactacctaaaaaataaggttttttggactttgtgcaaaattgcttcat
tagtttttcctgatttttggcagaaagatagagtgcaaggtaccctaaaa
tatggctgaagtaatttttctcggaaaatttttttcgtcgtaaaatacgg
attttagcaagtttgggccaaaaaatacctaaaaataagttttttttgaa
cttggtgcaaaattgcttcattagtttttcctgatttttggcagaaagat
ggagAGAGCCAGAttctctaaaaagtgactgaagcagttttttttcggaa
aattttctttggccgtaaaaatcggattttcttatttggggaaactccct
tttgtcatatttagggaaaatgagcatttctcgagattggcttggtgttt
ttttcttattttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNtggtaatatttaatttctgatggagcctgattttcgaaa
aaataattttttgagcaaatttgggcagaaaagtgcctatattcaagctg
ctcattaCACTTTCTTATACTCTCTTGCTTTTTgttctatttttatctga
ttttgatcaccaggtaggtccgttcagcatgttgcttgttttttaagaaa
tacacttttaagaaacatgagacTCAAAATGCCTAAAActtaagaaacat
ctaagaaacatgctgaggctgagaatgagaaaataacattttttaattcg
gttttttttaagaaccttccaatcaaaacaaatgtgtttttttctttgca
tgaaaaataggctgattatgtcaaaaaagaAACATTAAGGCTGCTttgta
aaactagtttctttaaaaaaaaagctgTAAACCTTAAAAATCATCTGCAA
AGTGTCACCGGGAAATGGGTTGAATTTTCTACTTCATAAGTCTAAAATAC
TTCAAAAGGAAGTCATGGAACCATTAAAAGGCCTAGATAACTTTAACCTT
TTAGAAGGAATTTAAATTTAATCTTTGGGATAGACTGATCCGTTTATTTA
TTACATCTCTCTTAACATTCTATCTCTACCCCTTCGCTTAAAATTAAcgg
tttaaaaatttctttctccCCCAGATTTGAAGGCCAAACGATCTAGAGGA
GGTTCGAATGATGAAAATACCAAACACATGCAAGACGCTATGAAGAAATT
AGACGCAGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgattatgtcaaa
aaagaAACATTAAGGCTGCTttgtaaaactagtttctttaaaaaaaaagc
tgTAAACCTTAAAAATCATCTGCAAAGTGTCACCGGGAAATGGGTTGAAT
TTTCTACTTCATAAGTCTAAAATACTTCAAAAGGAAGTCATGGAACCATT
AAAAGGCCTAGATAACTTTAACCTTTTAGAAGGAATTTAAATTTAATCTT
TGGGATAGACTGATCCGTTTATTTATTACATCTCTCTTAACATTCTATCT
CTACCCCTTCGCTTAAAATTAAcggtttaaaaatttctttctccCCCAGA
TTTGAAGGCCAAACGATCTAGAGGAGGTTCGAATGATGAAAATACCAAAC
ACATGCAAGACGCTATGAAGAAATTAGACGCAGgttgatatttcattttt
tcatatatttttcttataCCTAGGAAGACTCAATTAGGTAAAATTTAGTT
CGTTTTCTTTGCAACATCGAACTTTGAAGCTACTCGGCAACTATATTATA
CATCGAGCTTTGGTCGGATCTGTTTTTAGCCTTCATTTAGACAATCGGGA
TCTTGTTAAGGTAGTTAAGGTCTAGTTAAGGTCTTGTTTCACCCTAAAAC
AGATCCTCGAAGTTTTGCTTCTTCAATATCCATCGCTAAAAAAGGATAGG
GGGCAGATTCAATGTTATTAATGCAGGGGGTTaaatcattttcagacatt
aagTGGTAGTTTGATAGAATTTAAGAGatgaaaattctaaattttttggt
gtttccTGTAAAAGTTAAGAAGAAAACTTTAACCACTTCCCCAACTGTGA
AACATCATGGGTACGCTTTTGGAGGGGGAGAGGTTGACATATACCAGTTA
TATTGTTTTATTGAACAAAACTAAACTCAATTAACAAAGACCGCTGCTct
atttatatatttattttaggatttttattttcttactttttactgCTAGA
ATTGGAACGCCATTCAAAGAGACAAGCATCAAAGAAATCAGCTTCCAGTT
TATCCTTTGATGAACTCATGGACGACATCAGAGAAACAGGTTTGTAGCAT
TTCCAAGGCCTTCTCGACCTTCTCGACCTTCGCGATTGtctaaattgctt
tacattcattagactagagtctacatttggctgaactttgctttttgata
attttttatgacgctgagtccagtgaagtaatcgcgccatccagtctata
aaaaagctttaaattgGACCCCGGGCTTTACATTCATCTACTAAAAGATC
GATGCGTGCATCAACTCGGACCCAGTCCTCTTCAGCTAGATCCACTTGCA
TGTATCTTCtcaacaatagaccttttcataaattacgttacgaacatcac
ttgcctcgttttgaaattattgccatggtgagtaactcccagcggatttc
attaaaactactttctattcatgaaaaaatcatttaatgtctcaagggac
ataatcaccatggtaattttttgaatacgaggcaagtgatgttcgtgacg
taatttatgaaaagctcTTTACTGACAACATTTTCTCTTTCATTATAGGA
AGTATGCGAGACGACTTGAAGAACAAATTTTACAACATTATTGGTTACAA
ACAATCATCTCAAGATGATATCGATCAACATTTCAAACGTGAGTTATCAC
AACGTCAAGTTGACATTCATTTAACGTTCAAAAGCGTTACACTCCGTTAT
TTCTGAACAATCTTTTCTAACGACTCATTTGAATTCCAGGAAATATCTTG
AAACTCTGGTCTATTATGTGGATTATGGcgcctccttctcacagaccaac
gGGGACCCCTTCccaatggaaaaattggccaagtATCGTCCCCATTGGAA
AATTATACTACGATGAGTTTTtctcccgctgaaaataatcaaataagcaa
atcctcactgcaaaatactgTGCTATTCTTTCCATCCTCACTGAGTTTTA
TGGCTCAAAAGCAAtgaaattcaaatccccagccttTAAAAACACCTGAA
AATCGATCCCCATCgcgttttggtccgttatttttatccccactggctga
aaaaatcctaccgggtctgtgagaagggggtgtattatgTAGAAAAAGTC
GAAATTACGCCCATGATAGGAGAAGGTTGAAAAAACGTTTCTCGGCTTCT
GTCAAGGTTATAAAAATGATGGCTGGATCTTAAttaagcgaccgtagtgc
aatggtagagcatccggcaaCAGTTTGCatggttgtgggttcaacctcCA
GCCGAGTCATAccaaatttccaaaatggtacttgatgcctctctgcttga
tgctcagcaattaagagaaagatcaagggtaagtggagaaatctagGGAA
AAAAAGTGGCGCTctcccctaccttcaggtagatagctatGGAAAGAGGa
gtcttcgggtcgcctccgactgtagtcacagacttacttactacttactt
agCTCTCAATTAGAAATCCTTCGTAAAGCTTCGCTCTTTAATTTGATAAT
CATATAAATCATTTATTCTAGGGGCATATTTGGAAGGCTCTTTGGGAAGC
ATTTTGGATCAAATTCGCAACTCTAAACGTGGAAGCCAAAAAGGTAGgtc
tattttttttatttaataatCTGAAATTTGCAACTGTGGTTTTCTGTTAT
GCGAAAGTTTAATCCTAAAAGTTGGTACTTATTTGTATCTTTGGTACTTA
TTTGTATCTTTGGTACTTATTTGTATCTTTGGTACGGTAGACCTTCGGAA
GTATTCCAGTCAACGCTTGGTGTGTCCTTAGTGACACTGTTTGTGTTGTT
GCTATGATACGCCTTATATGTCTGTAACGGTCCCAGCGCAGTGACATGTA
TGGTTGTTGTTGTACCAGGttttatcaacaaaaaaaaaccgCAGCAAAAC
CTCAAAGTAGCTTTGAAGATAATCGACCTTTCAATAATTCGCAACTTTTA
ATTGCATGTAccattttttaagaatattttcattttttttcaccaaTAGA
CGAAATTTTCCGACGAGAAGATTCCGAATGCAAAGACGTGCGTTCAGATT
GTGCTCGATTGAAGTCGTACTGTGAAAATTACcgtgaaaaattggaagga
gcttGCGATAAAACTTGTCAATACTGtcgtaagtttttttttaagttttc
gaTAATTTAGGGATAGTAGCAAAGCATTGCAATTCCATGTTGTTAATGAA
ATAAATGATATGCTTTGAGAATAAGTTATTTAGTTTTTATAGTAGAAAAC
TTAAAATGTAGAAGCAACAAATTAATAAGACTGAATATGTGTGAATATAA
GTGTACTGGGTCTAGGTTCGCTCCGATTATAGTCTATGTAAACTAACGAC
ActattatttttttccattcCAACTTTACTCTCTGATAAGATCTCGGGGA
TTTGGAAATTATCGTAAAATAAACAAACGGGGGTAgggcgtttattaggc
accaAAGAGTACacattgaaaaaatataaaaaacggtATAAGTATATAAA
GATCAGCTTTTAGTGTCATAGTGAAACGCAACGCTCAAAAATAAGTTCCG
TTAAAGGTATATCACAACTGCTTGTATTTTTTAGGTGAATGTAAGAATTC
TGGAGCTATAAGTGACGAAATGTGTGAAAGCCTACGCAAAGAATCGAGAA
ACAATCCTCAAGGATTGGATTATTGTTTCATGGATGGTTACACTGATCGA
ATGAGAAATATTTGTTACAAATCGTGTGGTTATTGTAAAGCACCTGCCCC
ACCAAAATGCTCTGAAACTCAATACAAATGTTGTTGGGATGACGTCACTA
CAAAAGTTGATAATGCTGGATCTAACTGCCCAGGTAATAAAGCGACAGAT
TATCACTGCCTTGGAAATCATATGTATAGAAGATGATTCCATAGTCCGAA
AAAATGGTCCCTTTTATTAAGGTACTTcgactattcatgatatgcaccat
tgatTTCTCTTCaaccacggacccaacagctgattggttgcaagtgaagt
gttgactgattttacgtcacttacaaccaatcagctattggttccgtgat
gtaataggccatttcacaatcgaaatgaatcatgggtaatcaggactgat
tgcacCTCAATAACAACTTCTCGTTCAATAACAGCAGAcgcaaaaacatc
caaaattttagacAAACAGAAAGTCGTTATCACTGCGgggtggtcctgat
tacccatgattcatttcgactgtgaaatggcctattagaagacattgcat
tgacgcgTATCATAAATTAAAGGAATGTTTTGTTTGTTCACTATGTGCCT
GTAGGCGTCTTAAGACTATGGTTAAAAGTGTTCAGCGTTATTTGACTTAG
GGTACCCGTTTAGATCCACAACCTTCATGTTCTGGATGGAGCTCGTGAAA
TCAACAATTGAAAGACCATTCCTCgatttcaaccaatagaaaggCATTAT
CTAACATTTccttctcttttcttttctagcaTGTGTTGATCAATACAAGT
ACGCATGCACCACTTTCAAGGAGGATTGTTCCAGCCGATACAAACCAGGA
GAATTCATGCATACTTATTGTCCGGAAACTTGCAACCTTTGTGGTGGTAT
GTAGCTTTCATAAACTTCCTTTTAAGTATACTAATTTAGGTGTGTATTTA
TTTTGCCGTTTTGCCGTTTGGCCAAAATGTGATTTTTGGagggtatttaa
tttggcagatggggAAATTTTAGGCATTTCTATTTAAAAAATACTTGgaa
ttttaacagtttttacaTAAAAAGGCTGACATCATATATAATTTTTACCC
taaaagatttttgttaaatttgactGGCATTTGCATTTACTTTGGCGGCT
CTTACCAACAACGAACTTTGTTCCGCGAATCATCATGAATGACTAACAGT
TCGCGAAAAGTTATTTTcacaaaatacaaattttctatttcctTACCAAA
TGCCAATTGGGCGGTGACTATAATcctttcaagtcaaaaaaaaaaaaaca
tttcttgaaaaccactggaaaatggcaaaatttacatccttgcaaaatta
ttttttcatactaCACCCCCTGGAAACGCGTTCATCCACCTCCCTGTATG
AATATAAGATGGCCCATTATAACACTGAagagattataaaaatattttcc
gatTTTACAGGAGGATGTTTGAACGAGCGTGGGTTTGATGAATATTGTGC
TTTCTGGAAGACGGATTTGAACTGGTGTGtcgaaaatgaagataaaatgC
GCCATTACTGTAACAAAGAATGTGGATTCTGTTAAACGAGATCTGATTGG
TTTAAATCTAAAAGATTGGTTGATTTACAGGAAAGATAACGTGATTGgct
taaattttgataaaatccatTGTTATAAACCGATGAACTTTTGGTCGTTT
ACCGTcatcgttttgtataagattcccttTCCCGCACTAATATTCTCCTG
GCTCTTCCggaatctttccgctattttcCCGGGATAGCCGGCACGAGATT
TGACAGGTTTTTCTTCTAAAGATACGGAAAATTTTGTGTTTACTTACGAA
ATTTATTTATCTAGCTTTCCGaagtttatttttcaactacccggaGTTTT
GGTCTTTTTCCGTTAGGAAAGAGGTAGATGCGGGAAAGAGAATCTTATGC
ACAACAACGGTAATACGTTTATCAAACAATCCTTGGTTATACATTGATTT
TATTGTCAGTATTATTGTAATCTAGAAACCTATTATCTTCGTTTATTATT
TGTACATAATGTTTTATTATTTAGGAAACTTTGATGAGTTTTAGAATTCT
TGAGCTTGGAGCATCGTCGAAAAAATAATACGGTTATCGCTATAAGTTTA
GTATCTGTTAAAAACAGCCAAAGAACCaaacgagaaaaaaatttatttcg
ttttatattttcaaattcttatttttgtgAGCAGAAATTATGTTTTATGA
ATTTATggttaaaattttttgttttaaaatctattttgtttctaataaaa
ttatctttcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012170XLOC_012170Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021681-exon-sc0000393-1491911889:17050..17149TCONS_00021681-exon-sc0000393-1491911889:17050..17149Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:17050..17149TCONS_00021681-exon-sc0000393-1510915933:17050..17149Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:17050..17149TCONS_00021681-exon-sc0000393-1575043694:17050..17149Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:17561..17632TCONS_00021681-exon-sc0000393-1491911889:17561..17632Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:17561..17632TCONS_00021681-exon-sc0000393-1510915933:17561..17632Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:17561..17632TCONS_00021681-exon-sc0000393-1575043694:17561..17632Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:23424..23507TCONS_00021681-exon-sc0000393-1491911889:23424..23507Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:23424..23507TCONS_00021681-exon-sc0000393-1510915933:23424..23507Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:23424..23507TCONS_00021681-exon-sc0000393-1575043694:23424..23507Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:25149..25238TCONS_00021681-exon-sc0000393-1491911889:25149..25238Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:25149..25238TCONS_00021681-exon-sc0000393-1510915933:25149..25238Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:25149..25238TCONS_00021681-exon-sc0000393-1575043694:25149..25238Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:25748..25837TCONS_00021681-exon-sc0000393-1491911889:25748..25837Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:25748..25837TCONS_00021681-exon-sc0000393-1510915933:25748..25837Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:25748..25837TCONS_00021681-exon-sc0000393-1575043694:25748..25837Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:26721..26792TCONS_00021681-exon-sc0000393-1491911889:26721..26792Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:26721..26792TCONS_00021681-exon-sc0000393-1510915933:26721..26792Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:26721..26792TCONS_00021681-exon-sc0000393-1575043694:26721..26792Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:27199..27327TCONS_00021681-exon-sc0000393-1491911889:27199..27327Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:27199..27327TCONS_00021681-exon-sc0000393-1510915933:27199..27327Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:27199..27327TCONS_00021681-exon-sc0000393-1575043694:27199..27327Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:27784..28032TCONS_00021681-exon-sc0000393-1491911889:27784..28032Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:27784..28032TCONS_00021681-exon-sc0000393-1510915933:27784..28032Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:27784..28032TCONS_00021681-exon-sc0000393-1575043694:27784..28032Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:28679..28795TCONS_00021681-exon-sc0000393-1491911889:28679..28795Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:28679..28795TCONS_00021681-exon-sc0000393-1510915933:28679..28795Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:28679..28795TCONS_00021681-exon-sc0000393-1575043694:28679..28795Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1491911889:29360..30210TCONS_00021681-exon-sc0000393-1491911889:29360..30210Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1510915933:29360..30210TCONS_00021681-exon-sc0000393-1510915933:29360..30210Clytia hemisphaericaexon
TCONS_00021681-exon-sc0000393-1575043694:29360..30210TCONS_00021681-exon-sc0000393-1575043694:29360..30210Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:17050..30210 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.54998	2.25479	2.75855	2.25467	9.27853	6.33766	8.11197	9.45357	13.2103	11.3087	15.8613	10.6906	41.731	29.0069	26.1219	40.8065	33.6553	37.7622	102.155	100.474	47.633	51.8734	26.4764	36.7751	44.2885	70.0703	130.582	95.5597	15.9273	24.379
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021681 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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