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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021478 ID=TCONS_00021478|Name=TCONS_00021478|organism=Clytia hemisphaerica|type=transcript|length=1539bp
aacaatataaatatttttccgtttaaaatttactaaaaagaaaatacaaa
gtgaaaaatcaaaatctaaacAAAAGATAAATGGCACGTctacttttata
caaaaagttgacaaaagttgaaaactcATCTAAATCCTGTAAGCCTACTT
GAAATTGAACAATATTTGAATACAAAATGCAAGAAAAGTCTTGaaattaa
aatgtaataaataatatataaatttatttcaaaatttcgaagctaaaaaa
attacattactTCAAGTTTCATGCTTTATGGCAATCATCAGACgtacaaa
taaaaatattaactaaaactaataaataataaatcaatAATTACCAGTAA
GTAAAGTAAGTAGTATTATATTCATCTGGAGGCGGTGCTGGGAGTGAgag
agtctatccccttttctatttgagctagacctgggagatcgaatgatGAA
GTGGAGCGCCACCCTTACTCttagctcccagtaacttaccgcctagatca
gattagccaatctaagctactcatccgctgagttggtGGTATAACTCTTa
aattgtaaggcgaatgctctaccgactttGAGCTATCCGGCCACTAATTA
CCAGTATGCCAGGAATATGAAGCTGTAAAGTTTGGAAGTCCAAAATGAAT
GAATTAATTGATTGGAACATCTTGATCTGAGTAGAATAATATTGAACAAA
TCAAAATATGATAGCCGCATGAGAAGCCATATTGCATTTAAATGTTGACT
CTTTAAAGTCTAAGTGGCAACTGAATGATGATGTGTGATGATGTGGTTTT
GAAGTATGATATATAAACAAAAAGCAAAGTGGATAAATACTAAACATAGT
TAACAAAATtgacaaataaataaataaatttctgTGCATAAGTTAGCTAT
CATAAATAAACTTGAATAGGACTTTAACGTTATAGAAGTAACAGAAAAAC
TACTGAAAAAAAGCAAAGTGGGCATGcaataaaatgatgaaaatgtaaAT
AGATCCAAAACTGAAAGCTGTAATCAAATGTGAGTTATGacttagacgat
gctatcgtccgtgtaaaggtcagtaaacgcgTGAAAAAGTtcgggcgtca
gggcggtttacggtaaaaaagtggcggtagagttttggaacactgtaaac
atctccgccactgcttactccacccgaatttatcacgcctctcctaaact
attcccttttttagtgatcttgtgtagacgataggatcatCTAGTTATGA
CTTAACTATTAGAAAGTTTGCAGTCCTGAGAGTCAATTTCATAAGTCATT
AATTGCATTTAATATTAGTGAAAAATGGAGAgtgtttctttataaaaaat
ggATCAGGTGCACTTATCGGTACCCAAGGTAGCATTCTTTACCAGTAAAA
AagctggtaaagaatcttaccaaAGGGTGGTTTTATTCAaaagggatgag
ctggagtttttacaagatacttcactaaagtctattcacgataagtgtgc
actcttttttcttttacctataacttttgaaggaattct Run BLAST on NCBI transcript from alignment at sc0000386:289797..291335 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021478 ID=TCONS_00021478|Name=TCONS_00021478|organism=Clytia hemisphaerica|type=transcript|length=1539bp|location=Sequence derived from alignment at sc0000386:289797..291335 (Clytia hemisphaerica)
agaattccttcaaaagttataggtaaaagaaaaaagagtgcacacttatc
gtgaatagactttagtgaagtatcttgtaaaaactccagctcatcccttt
TGAATAAAACCACCCTttggtaagattctttaccagctTTTTTACTGGTA
AAGAATGCTACCTTGGGTACCGATAAGTGCACCTGATccattttttataa
agaaacacTCTCCATTTTTCACTAATATTAAATGCAATTAATGACTTATG
AAATTGACTCTCAGGACTGCAAACTTTCTAATAGTTAAGTCATAACTAGa
tgatcctatcgtctacacaagatcactaaaaaagggaatagtttaggaga
ggcgtgataaattcgggtggagtaagcagtggcggagatgtttacagtgt
tccaaaactctaccgccacttttttaccgtaaaccgccctgacgcccgaA
CTTTTTCAcgcgtttactgacctttacacggacgatagcatcgtctaagt
CATAACTCACATTTGATTACAGCTTTCAGTTTTGGATCTATttacatttt
catcattttattgCATGCCCACTTTGCTTTTTTTCAGTAGTTTTTCTGTT
ACTTCTATAACGTTAAAGTCCTATTCAAGTTTATTTATGATAGCTAACTT
ATGCAcagaaatttatttatttatttgtcaATTTTGTTAACTATGTTTAG
TATTTATCCACTTTGCTTTTTGTTTATATATCATACTTCAAAACCACATC
ATCACACATCATCATTCAGTTGCCACTTAGACTTTAAAGAGTCAACATTT
AAATGCAATATGGCTTCTCATGCGGCTATCATATTTTGATTTGTTCAATA
TTATTCTACTCAGATCAAGATGTTCCAATCAATTAATTCATTCATTTTGG
ACTTCCAAACTTTACAGCTTCATATTCCTGGCATACTGGTAATTAGTGGC
CGGATAGCTCaaagtcggtagagcattcgccttacaatttAAGAGTTATA
CCaccaactcagcggatgagtagcttagattggctaatctgatctaggcg
gtaagttactgggagctaaGAGTAAGGGTGGCGCTCCACTTCatcattcg
atctcccaggtctagctcaaatagaaaaggggatagactctcTCACTCCC
AGCACCGCCTCCAGATGAATATAATACTACTTACTTTACTTACTGGTAAT
TattgatttattatttattagttttagttaatatttttatttgtacGTCT
GATGATTGCCATAAAGCATGAAACTTGAagtaatgtaatttttttagctt
cgaaattttgaaataaatttatatattatttattacattttaatttCAAG
ACTTTTCTTGCATTTTGTATTCAAATATTGTTCAATTTCAAGTAGGCTTA
CAGGATTTAGATgagttttcaacttttgtcaactttttgtataaaagtag
ACGTGCCATTTATCTTTTgtttagattttgatttttcactttgtattttc
tttttagtaaattttaaacggaaaaatatttatattgtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021478-exon-sc0000386-1491911889:289797..291335 | TCONS_00021478-exon-sc0000386-1491911889:289797..291335 | Clytia hemisphaerica | exon |
| TCONS_00021478-exon-sc0000386-1510915933:289797..291335 | TCONS_00021478-exon-sc0000386-1510915933:289797..291335 | Clytia hemisphaerica | exon |
| TCONS_00021478-exon-sc0000386-1575043694:289797..291335 | TCONS_00021478-exon-sc0000386-1575043694:289797..291335 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000386 | supercontig | sc0000386:289797..291335 . |
Blast
The following BLAST results are available for this feature:
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