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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021319 ID=TCONS_00021319|Name=TCONS_00021319|organism=Clytia hemisphaerica|type=transcript|length=946bp
GAACACTTGCTATAATGACATTGTTTTCTTCCGGAAAAATCTATTCCTTC
TACCTTCCGGTAAAGCTGGAAAGACTTTCATTCTGGAAATGACGAAATTG
ATTGATTTTTGGAACACAAACTCAGCAAACTTTTCAAAGGTGTCCATAAA
AATGCTTATGTGTATGCCAAACCTTCTACTCCAGAAACCACATGCTAGAT
CAACCAGTAAAGAACACTCTTTAACTCTGATGAGAAGGCTACAATGGTGG
CAAgaaggagaatttgaaaaactGTTAAATGaagcaaaagaaattcaaaa
tcgTCTAAATGAATTTCAAAGACAGTCAACTAAATCCTCTACAGCTGAGT
TTACAAAGCACATGCTTAGGGGCAACATTAAAGCAGCTCTTCGTGTTCTT
GAACAAGCCCCTAATGGTGGTATTCTTGGTTTAAATGAAGACACTCTCAG
ATCCCTCAAAGAGCTACACCCTGAAGGATCTGATGCACAGAATGACATTT
TGTTAACTGGCGAACCTGCTCAAATTGACCCCATCGTATATGAATCGATT
GACGGCACCGCAATCTTGTCCGCTGCACTCAAAACAAGAGGATCTGCTGG
TCCCTCCACCCTTGATGCTGATGGCTGGCGAAGAATCCTTGCCTCGAGGA
ATTATGGTACCGTGGGTTCTGATCTTCGAACTTCGCTGGCTAACATGTTG
AAAATCCTTTGTCAAACGCCTTTAGACCCAAACTCGGAGGAAAGAGACAT
AGAAGCATTTCTTGCTTGTAGACTTGTGCCCCTTGACAAGAACCCTGGTG
TAAGACCAATAGGTATAGGAGAGGTGCTAAGGcgtatttttggaaaaact
ctAATTCATGTGATTAAAGGAGACATAATGAATGCTGCTGGTTCGCTGCA
AGTTTGTGCAGGCCAGCAGGCTGGGAGCGAGGCAGCTGTACATGCC Run BLAST on NCBI protein sequence of TCONS_00021319-protein >TCONS_00021319-protein ID=TCONS_00021319-protein|Name=TCONS_00021319-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
NTCYNDIVFFRKNLFLLPSGKAGKTFILEMTKLIDFWNTNSANFSKVSIK
MLMCMPNLLLQKPHARSTSKEHSLTLMRRLQWWQEGEFEKLLNEAKEIQN
RLNEFQRQSTKSSTAEFTKHMLRGNIKAALRVLEQAPNGGILGLNEDTLR
SLKELHPEGSDAQNDILLTGEPAQIDPIVYESIDGTAILSAALKTRGSAG
PSTLDADGWRRILASRNYGTVGSDLRTSLANMLKILCQTPLDPNSEERDI
EAFLACRLVPLDKNPGVRPIGIGEVLRRIFGKTLIHVIKGDIMNAAGSLQ
VCAGQQAGSEAAVHA Run BLAST on NCBI transcript from alignment at sc0000382:252341..253286 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021319 ID=TCONS_00021319|Name=TCONS_00021319|organism=Clytia hemisphaerica|type=transcript|length=946bp|location=Sequence derived from alignment at sc0000382:252341..253286 (Clytia hemisphaerica)
GGCATGTACAGCTGCCTCGCTCCCAGCCTGCTGGCCTGCACAAACTTGCA
GCGAACCAGCAGCATTCATTATGTCTCCTTTAATCACATGAATTagagtt
tttccaaaaatacgCCTTAGCACCTCTCCTATACCTATTGGTCTTACACC
AGGGTTCTTGTCAAGGGGCACAAGTCTACAAGCAAGAAATGCTTCTATGT
CTCTTTCCTCCGAGTTTGGGTCTAAAGGCGTTTGACAAAGGATTTTCAAC
ATGTTAGCCAGCGAAGTTCGAAGATCAGAACCCACGGTACCATAATTCCT
CGAGGCAAGGATTCTTCGCCAGCCATCAGCATCAAGGGTGGAGGGACCAG
CAGATCCTCTTGTTTTGAGTGCAGCGGACAAGATTGCGGTGCCGTCAATC
GATTCATATACGATGGGGTCAATTTGAGCAGGTTCGCCAGTTAACAAAAT
GTCATTCTGTGCATCAGATCCTTCAGGGTGTAGCTCTTTGAGGGATCTGA
GAGTGTCTTCATTTAAACCAAGAATACCACCATTAGGGGCTTGTTCAAGA
ACACGAAGAGCTGCTTTAATGTTGCCCCTAAGCATGTGCTTTGTAAACTC
AGCTGTAGAGGATTTAGTTGACTGTCTTTGAAATTCATTTAGAcgatttt
gaatttcttttgcttCATTTAACagtttttcaaattctccttcTTGCCAC
CATTGTAGCCTTCTCATCAGAGTTAAAGAGTGTTCTTTACTGGTTGATCT
AGCATGTGGTTTCTGGAGTAGAAGGTTTGGCATACACATAAGCATTTTTA
TGGACACCTTTGAAAAGTTTGCTGAGTTTGTGTTCCAAAAATCAATCAAT
TTCGTCATTTCCAGAATGAAAGTCTTTCCAGCTTTACCGGAAGGTAGAAG
GAATAGATTTTTCCGGAAGAAAACAATGTCATTATAGCAAGTGTTC Coding sequence (CDS) from alignment at sc0000382:252341..253286 >TCONS_00021319 ID=TCONS_00021319|Name=TCONS_00021319|organism=Clytia hemisphaerica|type=CDS|length=945bp|location=Sequence derived from alignment at sc0000382:252341..253286 (Clytia hemisphaerica)
GGCATGTACAGCTGCCTCGCTCCCAGCCTGCTGGCCTGCACAAACTTGCA
GCGAACCAGCAGCATTCATTATGTCTCCTTTAATCACATGAATTagagtt
tttccaaaaatacgCCTTAGCACCTCTCCTATACCTATTGGTCTTACACC
AGGGTTCTTGTCAAGGGGCACAAGTCTACAAGCAAGAAATGCTTCTATGT
CTCTTTCCTCCGAGTTTGGGTCTAAAGGCGTTTGACAAAGGATTTTCAAC
ATGTTAGCCAGCGAAGTTCGAAGATCAGAACCCACGGTACCATAATTCCT
CGAGGCAAGGATTCTTCGCCAGCCATCAGCATCAAGGGTGGAGGGACCAG
CAGATCCTCTTGTTTTGAGTGCAGCGGACAAGATTGCGGTGCCGTCAATC
GATTCATATACGATGGGGTCAATTTGAGCAGGTTCGCCAGTTAACAAAAT
GTCATTCTGTGCATCAGATCCTTCAGGGTGTAGCTCTTTGAGGGATCTGA
GAGTGTCTTCATTTAAACCAAGAATACCACCATTAGGGGCTTGTTCAAGA
ACACGAAGAGCTGCTTTAATGTTGCCCCTAAGCATGTGCTTTGTAAACTC
AGCTGTAGAGGATTTAGTTGACTGTCTTTGAAATTCATTTAGAcgatttt
gaatttcttttgcttCATTTAACagtttttcaaattctccttcTTGCCAC
CATTGTAGCCTTCTCATCAGAGTTAAAGAGTGTTCTTTACTGGTTGATCT
AGCATGTGGTTTCTGGAGTAGAAGGTTTGGCATACACATAAGCATTTTTA
TGGACACCTTTGAAAAGTTTGCTGAGTTTGTGTTCCAAAAATCAATCAAT
TTCGTCATTTCCAGAATGAAAGTCTTTCCAGCTTTACCGGAAGGTAGAAG
GAATAGATTTTTCCGGAAGAAAACAATGTCATTATAGCAAGTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021319-exon-sc0000382-1491911889:252341..253286 | TCONS_00021319-exon-sc0000382-1491911889:252341..253286 | Clytia hemisphaerica | exon |
| TCONS_00021319-exon-sc0000382-1510915933:252341..253286 | TCONS_00021319-exon-sc0000382-1510915933:252341..253286 | Clytia hemisphaerica | exon |
| TCONS_00021319-exon-sc0000382-1575043694:252341..253286 | TCONS_00021319-exon-sc0000382-1575043694:252341..253286 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000382 | supercontig | sc0000382:252341..253286 . |
Blast
The following BLAST results are available for this feature:
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