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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021280 ID=TCONS_00021280|Name=TCONS_00021280|organism=Clytia hemisphaerica|type=transcript|length=1196bp
gtggtagggctgaaggcttgattacaggcttcaggctggccatggcctct
cctcttgtgatttcttgtgtgGTACAAAATTATCTCAAGATCAGGCTCCA
ATCATACAAATTCAAGTGGCCagcaaagattttccaattttcaaacGTTA
TTTTCTTACACATTGTTCCACCCAGGTCAAATAGGATTTAAGTAAGtaga
aaagaaattaaatttgtccTGCCTAAATGAAAATCTTCGAACTTACCATA
CTAATGATTATAAAAGacaattctttctttttgaattctTATCAACTGGC
AGTTTGTTGTTACTGGATAAGAAAGCGAAGCTAATTCTTCTGGGACATTG
TTttataaaaactattttttgctttatatggataaaaaagttgattccTT
ATGTTAAttgttttcaacaaaaatgCATGTCATTAAGAAGTAACATTCTG
ATGATTTTAAAGTAAAGTAGGGGAAATAAAGTGGTGAAAGTTCCTTTGGA
ATGATGGGATACAGTATCATATCATATTGTAAGGATTAACCGTGTATTTA
TATTGTGGTAGAAAAGAGTACATTTGTGTTATATTCTTGAACGTATTACT
ATTTATAATCAAATACCGTTGGCTTATCCTGTTTTATTACTGTTCTGTAG
ATATTTTACACAATGTGAAAGGGTGGTTGGGTGGACGAAACATAGTTGCA
TTCTGAAGAGTCAACTCAtgttttgaaatagtttttcaTGTTCAAACCCT
GAGATGGAACTGTGCggcttttcttctttttccctCTCTTTTTTCAGGTT
ATTGGCAATATACTGGTACAATGAATTATCTTGTGACTGTGGTTGATGAT
TTTATTACTGGAaagatttcttaatttttctgaCAATAAAGTAAGTTTGT
TTCATTATAAGTCTACTCTTGTTAAGTAGAATTGTGATCACTTAGACTTG
AAGACAAATGAACAATTTGTTTTTAGGTTAGATCAGGATTCCTTGACTTG
CTAATCCAGTAAACAGACTAAAGTAGCAGCCATAATATTATAATATTTAT
AATAgagtctaggtaatgttctagttggtgagttggggagttgggaagtt
gctagtttcgagttggggagtttgTAAACctttacggcgaccgaaaattt
tctaatttaaactaatgtagcccaaaagtacaaatttcaaattagc Run BLAST on NCBI transcript from alignment at sc0000380:16217..17412 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021280 ID=TCONS_00021280|Name=TCONS_00021280|organism=Clytia hemisphaerica|type=transcript|length=1196bp|location=Sequence derived from alignment at sc0000380:16217..17412 (Clytia hemisphaerica)
gctaatttgaaatttgtacttttgggctacattagtttaaattagaaaat
tttcggtcgccgtaaagGTTTAcaaactccccaactcgaaactagcaact
tcccaactccccaactcaccaactagaacattacctagactcTATTATAA
ATATTATAATATTATGGCTGCTACTTTAGTCTGTTTACTGGATTAGCAAG
TCAAGGAATCCTGATCTAACCTAAAAACAAATTGTTCATTTGTCTTCAAG
TCTAAGTGATCACAATTCTACTTAACAAGAGTAGACTTATAATGAAACAA
ACTTACTTTATTGtcagaaaaattaagaaatcttTCCAGTAATAAAATCA
TCAACCACAGTCACAAGATAATTCATTGTACCAGTATATTGCCAATAACC
TGAAAAAAGAGagggaaaaagaagaaaagccGCACAGTTCCATCTCAGGG
TTTGAACAtgaaaaactatttcaaaacaTGAGTTGACTCTTCAGAATGCA
ACTATGTTTCGTCCACCCAACCACCCTTTCACATTGTGTAAAATATCTAC
AGAACAGTAATAAAACAGGATAAGCCAACGGTATTTGATTATAAATAGTA
ATACGTTCAAGAATATAACACAAATGTACTCTTTTCTACCACAATATAAA
TACACGGTTAATCCTTACAATATGATATGATACTGTATCCCATCATTCCA
AAGGAACTTTCACCACTTTATTTCCCCTACTTTACTTTAAAATCATCAGA
ATGTTACTTCTTAATGACATGcatttttgttgaaaacaaTTAACATAAgg
aatcaacttttttatccatataaagcaaaaaatagtttttataaAACAAT
GTCCCAGAAGAATTAGCTTCGCTTTCTTATCCAGTAACAACAAACTGCCA
GTTGATAagaattcaaaaagaaagaattgtCTTTTATAATCATTAGTATG
GTAAGTTCGAAGATTTTCATTTAGGCAggacaaatttaatttcttttcta
CTTACTTAAATCCTATTTGACCTGGGTGGAACAATGTGTAAGAAAATAAC
gtttgaaaattggaaaatctttgctGGCCACTTGAATTTGTATGATTGGA
GCCTGATCTTGAGATAATTTTGTACcacacaagaaatcacaagaggagag
gccatggccagcctgaagcctgtaatcaagccttcagccctaccac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021280-exon-sc0000380-1491911889:16217..17412 | TCONS_00021280-exon-sc0000380-1491911889:16217..17412 | Clytia hemisphaerica | exon |
| TCONS_00021280-exon-sc0000380-1510915933:16217..17412 | TCONS_00021280-exon-sc0000380-1510915933:16217..17412 | Clytia hemisphaerica | exon |
| TCONS_00021280-exon-sc0000380-1575043694:16217..17412 | TCONS_00021280-exon-sc0000380-1575043694:16217..17412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380 | supercontig | sc0000380:16217..17412 . |
Blast
The following BLAST results are available for this feature:
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