TCONS_00021077 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021077
Unique NameTCONS_00021077
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1829

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021077 ID=TCONS_00021077|Name=TCONS_00021077|organism=Clytia hemisphaerica|type=transcript|length=1829bp
ATAGCAGGGCACAAAGCGATAGTTGTTTATAAAACAACACGGAGAATAAA
AGGGTTTATTGTCGGTAGCTAGTACTTCCAATGGCTTTTAACAACGGTGT
ATAATGGGACAATGTGATATTTGTTTTCAAAGCCTTTAAAATCTTAGCTT
CTTCCTTGGAAACTTATATAGCAGCTGGGAGCTGACTTTTTAAAGAAGAT
ACTCAGGAAAGCGATTATTTGAAAGATGAGGGAGATACAAGTACTTCTAC
TGTTCAATTTATGTATCGCTTCTTACGGACAAGTTCCAGCTGGTCCAGTT
GTGAGGGACagactttataagaatattggAAAGATCCACAAATCATATTC
GTTCACTTTCGAAATCAAACCAACAGGAACAATCACAGGATGGTCAAACA
TCGTTCATGCTTATGATAAAGAAGGAAACTGTTGTGGAGTCGGTCAACGT
ATCCCTGCTATATTTGTGCACTCGCGATCCACTCGTCTTCACATTACCAA
CGCTGTGAGTGGTAATGGAAACTACGCTGTCAATAGAAATATACCTATGG
GCCAATTCACCAATGTGACAATTCAGCAAGTTAAGCAATCAGATGGCTCA
TACCTGTATTCAATTTACCTCGATAAGACAAGAGTTGCCTCCACAATCAA
TACCCAACCTCAGGAATTCGACAATGTTCAATTGTATGCTTCAGATAAAT
GGTACAATCCATCTGAAGTTGTCTTGAGATATTTCAACTTCCAAAGTCCT
TACTCAAAACACGGTAAGCTCACGCAGTTACTTTGTCGTCTACATTTTAG
ATNATGTTCAATTGTTTGCTTCAGATAAATGGTACAATCCATCTAAAGTT
GTCTTGAGATATTTCAACTTCCAAAGTCCTTTCCCAAAACAAGaatgtGG
TGTCAGCAAAGTTGGACAAAGCAGAATCGTTGGTGGTCAGAATGCTCTGC
CGGGAGAATGGCCATGGCAGGCATTTTATATAATTAGAAAAGGAACCAGA
GCCTTTTCCTGTGGAGGCGTTTTGATCCACAAGAAATGGGTGTTAACGGC
CGCCCACTGTACAGTAGGAGACGGTGCTTTTGTTAGTAAACTTTATCTGG
GCGAACACGAGCGTGGAAAAGTTGACACTGGAGAACAAACGCCAAAAGTA
AAACGAATAATCAACCATGAAATGTATCGACTCGCACCAGGAACCAATAG
TTTTGACTTTGCacttttggaactggaaacaGAAGCTCAAATAACAGATA
ACGTTCGCACTATTTGTATTCCAAAGAAGCATAGCGGGACTGATTTTGAT
AATCAAATATGTGACATCACAGGATGGGGAACAACGTCAGAAGGTGGCAG
TGGCGCCAACATCTTACAAGAAGCGAGTGTTAGAGTGTACCCTCAACCAG
AATGTGTTGGAAATTACGGTAGTCGAATTGGTGACAGTATGTTTTGTGCC
GGATATCGTGATGGTGGAGTAGACGCGTGTCAAGGAGACAGTGGTGGTCC
CTTACAATGCAAAGATGGAAACAAATGGGTTCTCTGGGGAATAACATCTT
GGGGTATTGGATGTGCCAGACCTGATAGAGCTGGAGTCTATAGCAAGGTT
ACACAAGTTGTGGATTGGATTGAAGAGAAAACTGGAGTtactttttaaaa
cattttgtttatttcataAGGTTTtattaaacgcttttttataagaatat
cagggtgagaatTGACTAAATGTTAAGAATGTCAAAAGACTGTGTTGAGA
ATATCTCACCCTCAGATTCTGAATATTCCTAAAGATACTTCACTCTcacc
caaaaaaaaacataagtaTTATAAAAGTG
Run BLAST on NCBI

transcript from alignment at sc0000377:216529..228630-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021077 ID=TCONS_00021077|Name=TCONS_00021077|organism=Clytia hemisphaerica|type=transcript|length=12102bp|location=Sequence derived from alignment at sc0000377:216529..228630- (Clytia hemisphaerica)
ATAGCAGGGCACAAAGCGATAGTTGTTTATAAAACAACACGGAGAATAAA
AGGGTTTATTGTCGGTAGCTAGTACTTCCAATGGCTTTTAACAACGGTGT
ATAATGGGACAATGTGATATTTGTTTTCAAAGCCTTTAAAATCTTAGCTT
CTTCCTTGGAAACTTATATAGCAGCTGGGAGCTGACTTTTTAAAGAAGAT
ACTCAGGAAAGCGATTATTTGAAAGATGAGGGAGATACAAGTACTTCTAC
TGTTCAATTTATGTATCGCTTCTTACGGACAAGGTAATCTATTCATTTGT
TACAAATATTTGGTGATATCACAGTACTTAAAATAAGATAAAGAAACTGG
CCTAGGGTATTAAAGTTGACAATTCCAGTGCAACAGAGTGGTGCCCTCCC
TTCCTTTGGGTTGATAGCTATTGAAAGAAAGAGGAGCCTTCGACTGAGGT
CGCAGATTTCAGTTGAACTCTTGTAATTCGAATACTCACCTAATTCAAAC
AGATTCTGTGGTCCCTTCATAATTTACCTTGAAAACCTTACAAGAAAACT
CCTATGATTTGAACCCATGTAATTTGAAAAATCATTTAAATCGAACAAAT
TATCCGGTCCCATCAGAAAATTTTAATCATGTAATTCGAATTTTGGAGGA
GAATTCCAAGAAACGAGAGCAGAAAATGAAACAATCGACAATCGAATTAC
TTTTTTGAAAAATTATGAATTGACTTTTAAATTTAAAAACATGACCGTGT
CAAGATTATTTGTACTAGTATTTCACAATTCTCGCTCGAAAATACAAAAA
TTGTTCAAAAGTAAACCTGGGAAAGTCTTTTTTCATCAAATCAGGTCAAA
AATATGAAAACTCATTTAATTCGAAACTCATGTAATTTGAACAAAATTCT
CGGTCCCTTAAGAATTCGTAGCGAGCGGCGCCATATTAGCCATTGAGGAG
ACTTTTAAAAAATATACAAAAAGTTTCTGTGGTGAGAAGGGTTTTGGAGT
ATAATATTTTCAAATACAATTTCATCGTAAAGAACTTTCCCGGTTGAGAT
GATACATTTCATTGTATTCTTTTTATCGGGGACGAACTTTGGGCAAGTTT
TTCTAGCAGGTGGGAGCTCCAACGAGTCTGACACTGGGGTGTAATAGATA
TTTTTGAAAAACGTTTTCTCAATCCAAATCATCGCTCTTAAACTCAATCT
TTTTTTTTGTATTAGTTCCAGCTGGTCCAGTTGTGAGGGACAGACTTTAT
AAGAATATTGGAAAGATCCACAAATCATATTCGTTCACTTTCGAAATCAA
ACCAACAGGAACAATCACAGGATGGTCAAACATCGTTCATGCTTATGATA
AAGAAGGTATGTCTTATAACTACAAACAGACCGCGTCTTGCAGATATCTA
TGTATCTTGAAGACTCTGCTTTAATATTCTATATTTCTTATTTACACACT
TTTTTTATAAGAATACATTTTAATAAAAATGTTCATGATGAAAATGGCCA
AAAAATTTGAATAATGCTAAGAATATCACCGTCATAGAATTTTGCTACTC
AAGCTAAGAATGTAACTTATAGAGCATTTTCAATTATAAATTATCAATTA
CCCTAAAGTAATGCACACTCCTTTCACAAAAATGCCATTTTATGCTTAAG
AGGCATGTACTAAATGTTAAATCTAGTTTGAATTAGGATCCTAACCTAAG
AATACTGTAGGAATGATGATTTTCTCAAAAAGAATTAAGAATATCCATGA
TGAAATGAATTTACACCATTCCTATAAAGAAAAAAGCGTGTATTTCACTA
ATCTCGAAAGTTTTCTTAAATTTGAATGAATATTTGCGACAACTTTCGTG
GGACGCAGCTGCATGTGATTGGTTCAAAAGTAGATAGGATTTTAAATCTT
TTTGAGAGGAGGTCCATGTATTGAGCCTGGCAAAAGCTTTTATGACCTAA
AAGTTCCAGACAAGACTTTTAATCCAAAATATTAGGTAAAAAAATTGCCG
ACTTTTCATGATCATTTCCAAAAGGCATGATTGATACGGGCGAATAGAGC
ATGAAATAATTCCCTATCATAGCTTTGTGTTGTCATCATTTGTTCTCAAT
TTCAAAAATGAATTTCTGACACCTGATGAAATCCGACGCCAATGTCGAGT
CAGCTTTGAAATATATATTCTTTTTCTTCAGGAAACTGTTGTGGAGTCGG
TCAACGTATCCCTGCTATATTTGTGCACTCGCGATCCACTCGTCTTCACA
TTACCAACGCTGTGAGTGGTAATGGAAACTACGCTGTCAATAGAAATATA
CCTATGGGCCAATTCACCAATGTGACAATTCAGCAAGTTAAGCAATCAGA
TGGCTCATACCTGTATTCAATTTACCTCGATAAGACAAGAGTTGCCTCCA
CAATCAATACCCAACCTCAGGAATTCGACAATGTTCAATTGTATGCTTCA
GATAAATGGTACAATCCATCTGAAGTTGTCTTGAGATATTTCAACTTCCA
AAGTCCTTACTCAAAACACGGTAAGCTCACGCAGTTACTTTGTCGTCTAC
ATTTTAGATTAAGAACGCCTTGATCGTTTCGTTATTTTGCACCTGGGGAA
TTTGCCTCTCTGCCAGGGGCCGATTTTTTTTGGGTGGCGCCGAAATACAA
AGGGTGCAAAAAGATGCCTCTGATTACTAATTTGGGCGCCCCACTGCTCT
TTTAGACCTTAGATATGGCCGTTTTCGGTCAAAGAAAATAAACTATTATT
AACCCCTTTATACCATTTTTTCATCTCGCGAAAGAATCTGCTCGCGAAAG
TTCGTAAGCCTAAAGTAGTTTCAATATTTGATCGAACGTACGTGACTTTA
CTAACTCTTAGCCTTCTAGTCTCTAGTTACAACCGGTCTCAGTATTTTTA
ATGAACATCATATTTTTATTAGCTACATATATATTTATCATACTCATACT
AATCATATTCTTGAATCGAGATTTATAGCCTGATGAAATTTGCTTTCCAC
AAGTCATGTGCACAGTTATTGATTTGAAACACATTGAATAACTACACTTT
TAAAACTCAACTTTCTGATTTTCCAGCTGGTCCAGTTGTGAGGGACAGAC
TTTACAAGAACATNAAGTCATGTGCACAGTTATTGATTTGAAACACATTG
AATAACTACACTTTTAAAACTCAACTTTCTGATTTTCCAGCTGGTCCAGT
TGTGAGGGACAGACTTTACAAGAACATCGGAAAGATCCACAAATCATATT
CGTTCACTTTCGAAATCAAACCAACAGGAACAATCGCAGGATGGTCAAAC
ATCGTTCATGCTTATGATAGAGAAGGTATGTTTCGGAAAGGCTGGTAGTA
AAGTAATTCTTCTTCTTCCAGCTTTCCAATCAATCTTGTTTTACACACCT
AGATCTACATAAACTTTCTTAACTTAACAAAACGGATTTTTAAAGCTTTT
TTGTTGTTTGTCATATCGGGCAATATAAAGCCCTGCATTCTCGCTGAATT
TTTCTTAAACTTAATAAAAACATTTCTGATGATGTCTTCTAAACACATGA
ATTCAAGCACATTCACCTTGTCGAGTCAGCTTTGAAATATGTAATCTTTT
CCTTCAGGGAACTGTTGTGGAGTCGGTCAACGTATCCCTGCTATATTTGT
GTACTCGCGATCCACTCGTCTTCACATTACCAACGCTGTGAGTGGTAATG
GAAACTACGCTGTCAATAGAAATATACCTATGGGCCAATTCACCAATGTG
ACAATTCAGCAAGTTAAGCAATCAGATGGCTCATACCTGTATTCAATTTA
CCTCGATAAGACAAGAGTTGCCTCCACAATCAATACCCAACCTCAGGAAT
TCGACAATGTTCAATTGTATGCTTCAGATAAATGGTACAATCCATCTGAA
GTTGTCTTGAGATATTTCAACTTCCAAAGTCCTTACTCAAAACACGGTAA
GCTCACGCAGTTACTTTGTCGTCTACATTTTAGATNATGTTCAATTGTTT
GCTTCAGATAAATGGTACAATCCATCTAAAGTTGTCTTGAGATATTTCAA
CTTCCAAAGTCCTTTCCCAAAACAAGGTAATAAGACTTCACAGTGAAATA
GATTTCTTAAAATAGCATACAATGGAATGTTTTATGCCCATGTTCCCTGT
CCTGTTCAATTTTTAGATAATCTCTCAATTTCTGAGACAATGGTCCCAAA
GCCCTCTGTCAGCGTTGAGTTCTTGAAAATTTTGGGGTCTGGGGAACGGA
TTTTTTCTTGCAAAAATGTTTAAAATCCTTCCGTTTCAAGATACTTGTTG
GGGACCTCAATCACACTCATTGTACCAATACTTGTCTTGCAAAATGCTTG
ACTTTTACAACAATACAAATCATATCTTTTTTTAAGAATGTGGTGTCAGC
AAAGTTGGACAAAGCAGAATCGTTGGTGGTCAGAATGCTCTGCCGGGAGA
ATGGCCATGGCAGGTTCGAAACATTGTTTTCCAAATAAATTTATAAAAGT
GGACTCTCTATAACTCGAACCTCTAATACTCGAATGTCTCCTTAACCCGA
ACAAGTTTTTTTGTTCATTCAGTTAATAATGCCTAATAAACCTATACTCT
TTATTTCAAAATCCCCTTAACTCGAATGAATTTGTGTTCCCCGTGCGTGT
TCGAGTTATAGAGATTCTGCATTAAAGCTCTAGCATGAAACCCGTCACAG
TGACAACCTAAAAACCTTTTTCTCTAGACTCTACCCCATACATACACCTA
TAAACTCCTAAAACGTGAAAAGACTGGGTTAGAATTTCCCTAGTAAATTT
TTGCACAAAAAGTGCTGTCGTCAACAGAAACATCATTTCAAGAGTTTCTC
TCTCAATTTTTATTTTCTTTACTTCATGAGGAACCTCTGTGCAAAATTTC
AGAGCTCTATCACAGTTTGAAGTATTGTCCCTTTTATATGTGATAATCCG
CCCTACTATAGAAGGATTGACGTCAAAATGTCAGGAGTCATTGCATTGAC
TTTTCATAAAAAAGGAATTTTGACATTAATCTCTCCTGGCGGCTCTAACC
CAGCTTTCTCATGCTTTAGGCGTATTAAGGAATACAGTTGTGTAAAACAT
TTTCCATGCCTTATATACTGAGGCAGTAATCAACTTTTTTACATTTAGCC
ATAGTGTATTCACCAATAGTAGCTTGGCGGCACCCATTCCCATTTTTATA
TCGCAACAAACATTACCCTATATATTTTGCAATCGCTTTGCTCGCCAAAC
GTTTCAACAAACTTTTTTCTTAGTGCAGTCAAAATCTTTAATTACTTCAA
TTTGCAACCCCATTTTTGGTCGCACCAAGATAAACTTGAGACTCTTTCGT
CTTGGAAAATTTTATCAAAGAGATGGGAAATTTTAATCGTTCTTCTTCTT
TGTACTTCTTCAGGCATTTTATATAATTAGAAAAGGAANTTAAAACGTGA
AAAGACTGGGTTAGAATTTCCCTAGTAAATTTTTGCACAAAAAGTGCTGT
CGTCAACAGAAACATCATTTTCAAGAGTTTCTCTCTCAATTTTTATTTTC
TTTACTTCATGAGGAACCTCTGTGCAAAATTTCAGAGCTCTATCACAATT
TGAAGTATCGTCCCTTTTATATGTGATAATCCGCCCTACTATAGAAGGAT
TGACGTCAAATTTCAGGAGTCATTGCATTGACTTCTCATCAAGAAAGGAA
TTTTGACATTAATCTCTCCTGGTGGCTCTAACCCAGCTTTCTCACGCTTT
AGGCGTATTAAGGAATACAGTTGTGTAAAACATTTTCCATGCCTTATATA
CTGAGGCAGTAATCAACTTTTTTAAATGGAAATATTGGCCTTAGTGTATT
CACCAATAGTAGCTTGGCGGCACCCATTCCCATTTTTATATCGCAACAAA
CATTACCCTATATATTTCGCAATCGCTTTGCTCGCCAAACGTTTCAACAA
ACTTTTTTCTTAGTGCAGTCAAAATCTTTAATTACTTCAATTTGCAACCC
CATTTTTGGTCGCACCAAGATAAACTTGAGACTCTTTCGTCTTGGAAAAT
TTTATCAAAGAGATGGGAAATTTTAATCGTTCTTCTTCTTTGTACTTCTT
CAGGCATTTTATATAATTAGAAAAGGAACCAGAGCCTTTTCCTGTGGAGG
CGTTTTGATCCACAAGAAATGGGTGTTAACGGCCGCCCACTGTACAGTAG
GAGACGGTGCTTTTGTTAGTAAACTTTATCTGGGTAAGTTATACCAGTTA
TTACATTCTCTTTATATGTTTTTACCGGATGTATCGTTCGTTCTACCAAT
TTGAGAGGCTGAAATATAAGTTAAGAAGGAGAGTCGATCGCCATACTACC
CTTATACTCTTTCTGGGAGTCATCATAGTGAATTTTGTTGCCCATTGGTT
GCGTCATAGTACATGGTAGCGTGAAGGATTAGATGACGGACTGCAATGGA
CTTGGCTCGAATCACCTCCGATGGCTAACTGCAACTTACTTACTTAATTT
CCTGGATCTATTTGAAACTTTTTGTCTTGTCTTTCTAGGCGAACACGAGC
GTGGAAAAGTTGACACTGGAGAACAAACGCCAAAAGTAAAACGAATAATC
AACCATGAAATGTATCGACTCGCACCAGGAACCAATAGTTTTGACTTTGC
ACTTTTGGAACTGGAAACAGAAGCTCAAATAACAGATAACGTTCGCACTA
TTTGTATTCCAAAGAAGCATAGCGGGACTGATTTTGATAATCAAATATGT
GACATCACAGGATGGGGAACAACGTCAGAAGGTGGCAGTGGCGCCAACGT
AAGTTGTTTTGGGTTGAATATTTTTCATACGTGGTATATGCATATTGACA
CTTCCTGATGCATATTTCCATAACGGGACGCCATCACTTTAAAAAAAATT
TTATCAAACTCGAACCCAGTTACTTAGTTCGCTCTTTTATGATTCTGATA
CTGCTCACGAAAAGATTGCATTGCGATTTTATCACCTCCATTAAATTGCC
TTTAAAACATAAGTTTTCAGCAAAAAGAATACATGATATTTTACGCCCAT
AATCGCACGAAGAGTTATTTTTTTTTCTTTGGCGCGCCTTCAAAGAGAGC
AATTAATTGTTAATTGCTTCCTGTAGAGAGCAATTAGGCAATGAGGCTAA
TCACTCGTAATTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCAGGCATTTTATATAATTAGAAAA
GGAACCAGAGCCTTTTCTTGTGGAGGTGTTTTGATCCACAAGAAATGGGT
GTTAACGGCCGCCCACTGTACAGTAGGAGACGGTGCTTTTGTTAGTAAAC
TTTATCTGGGTAAGTTATACCAGTTATTACATTCTCTTTATATGTTTTTA
CCGGATGTATCGTTCGTTCTACCAATTTGAGAGGCTGAAATATAAGTTAA
GAAGGAGAGTCGATCGCCATACTACCCTTATACTCTTTCTGGGAGTCATC
ATAGTGAATTTTGTTGCCCATTGGTTGCGTCATAGTACATGGTAGCGTGA
AGGATTAGATGACGGACTGCAATGGACTTGGCTCGAATCACCTCCGATGG
CTAACCGCAACTTACTTACTTAATTTCCTGGATCTATTTGAAACTTTTTG
TCTTGTCTTTCTAGGCGAACACGAGCGTGGAAAAGTTGACACTGGAGAAC
AAACGCCAAAAGTAAAACGAATAATCAACCATGAAATGTATCGACTCGCA
CCAGGAACCAATAGTTTTGACTTTGCACTTTTGGAACTGGAAACAGAAGC
TCAAATAACAGATAATGTTCGCACTATTTGTATTCCAAAGAAGCATAGCG
GGACTGATTTTGATAATCAAATATGTGACATCACAGGATGGGGAACAACG
TCAGAAGGTGGCAGTGGCGCCAACGTAAGTTGTTTTGGGTTGAATATTTT
TCATACGTGGTATATGCATATTGACACCTCCTGATGCATATTTCCATAAC
GGGACGCCATCACTTTAAAAAAAAATTTATCAAACTCGAACCCAGTTACT
TAGTTCGCTCTTTTATGATTCTGATACTGCTCACGAAAAGATTGCATTGC
GATTTTATCACCTCCATTAAATTGCCCTTAAAACGTAAGTTTTCAGCAAA
AAGAATACATGATATTTTACGCCCATAATCGCACGAACAGTTATTTTTTT
TTCTTTGGCGCGCCTTCAAAGAGAGCAATTAATCGTTAATTGCTTCCTGT
AGAGAGCAATTAGGCAATGAGGCTAATCACTCGTAATTTTTTTACTTCAA
ATTTTCCTCGACCTTTCGGACTCAAACAAAATTAATAACAAAAAAAATCA
CTCGTGCAATTTTCGAATTGTACGAGTTATTATGTGATTACGAGCTAATC
GTACAATTTTTTCACTACTTTTCCCCGTCAGGAAAGTAAATTACAATGAA
AGTTTTACATTTTTCTCTCGTATTGCACTCTTTATCAATTGATTACATAT
ACTAATCTGATTCTAACATTTCCCGAGTGGATTTAATTTTGTGACTCAGC
AATCTCACGCACGCTATATTTTCGCGAAAAATTCGAGAAAAAATTATCAG
ATTAAACAATCGTTTCTACGTCTTTTCAAACCTTTCCCTAATATAAGAAG
CTAATTCCTTGAATAAAGTTATTTTTGCCACTAGTGAAGTATAATTTTGG
AATAGTAGGATGGGGGTAAAATTGTGAAAATCACATGCACAGGAAAAATG
TTTTGATTCCCTAGGCTATGAAAATGCATACTTCCAGATCTGGAAATCTG
GATTTTTCCCTAACCAATCCCTAGCTAGGGAAGATGCAACAGTTCCCTAG
TTATGGAAATAGAATTTCCCTATTATTGAAAAGTGCTTTTCTCGAGCGAA
CCCCAATAAAACCCCATAGAGTTACCCATATTCACGAATTAAATCCTGAT
TTATAGAAAGCTGGTAAAATAATTAAATGTATTCGATCATTCTGTGAGCA
TTGGTTCGATAGCTCTCATTCGTTCTGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGCAATTCTGAATGGGCAACTAGA
ATGTTAAAAATATTAGTTTTCCACATGTGGAAATCCGTTTTCACTAACAC
ATTGGTAATACACTTCCAGCATGGGAAAATAGGATTCCCTAGTTTCCTTA
CTTTCCCGAACTTAAAATTCTAGACTAATGTGATCGAACAAAAAACCACA
TCTGAAAATGAACAATCCCTAGGCTAGGGAATCAATAATTTTTTTCCTGT
GATGATCAACGTTAACTACACTTTCAATTGTAGATCTTACAAGAAGCGAG
TGTTAGAGTGTACCCTCAACCAGAATGTGTTGGAAATTACGGTAGTCGAA
TTGGTGACAGTATGTTTTGTGCCGGATATCGTGATGGTGGAGTAGACGCG
TGTCAAGGAGACAGTGGTGGTCCCTTACAATGCAAAGATGGAAACAAATG
GGTTCTCTGGGGAATAACATCTTGGGGTATTGGATGTGCCAGACCTGATA
GAGCTGGAGTCTATAGCAAGGTTACACAAGTTGTGGATTGGATTGAAGAG
AAAACTGGAGTTACTTTTTAAAACATTTTGTTTATTTCATAAGGTTTTAT
TAAACGCTTTTTTATAAGAATATCAGGGTGAGAATTGACTAAATGTTAAG
AATGTCAAAAGACTGTGTTGAGAATATCTCACCCTCAGATTCTGAATATT
CCTAAAGATACTTCACTCTCACCCAAAAAAAAACATAAGTATTATAAAAG
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011812XLOC_011812Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021077-exon-sc0000377-1575043694:228348..228630TCONS_00021077-exon-sc0000377-1575043694:228348..228630Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:227275..227415TCONS_00021077-exon-sc0000377-1575043694:227275..227415Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:226382..226449TCONS_00021077-exon-sc0000377-1575043694:226382..226449Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:224555..224955TCONS_00021077-exon-sc0000377-1575043694:224555..224955Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:224168..224244TCONS_00021077-exon-sc0000377-1575043694:224168..224244Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:222398..222527TCONS_00021077-exon-sc0000377-1575043694:222398..222527Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:221833..222092TCONS_00021077-exon-sc0000377-1575043694:221833..222092Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1575043694:216529..216997TCONS_00021077-exon-sc0000377-1575043694:216529..216997Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:228348..228630TCONS_00021077-exon-sc0000377-1510915933:228348..228630Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:227275..227415TCONS_00021077-exon-sc0000377-1510915933:227275..227415Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:226382..226449TCONS_00021077-exon-sc0000377-1510915933:226382..226449Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:224555..224955TCONS_00021077-exon-sc0000377-1510915933:224555..224955Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:224168..224244TCONS_00021077-exon-sc0000377-1510915933:224168..224244Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:222398..222527TCONS_00021077-exon-sc0000377-1510915933:222398..222527Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:221833..222092TCONS_00021077-exon-sc0000377-1510915933:221833..222092Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1510915933:216529..216997TCONS_00021077-exon-sc0000377-1510915933:216529..216997Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:228348..228630TCONS_00021077-exon-sc0000377-1491911889:228348..228630Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:227275..227415TCONS_00021077-exon-sc0000377-1491911889:227275..227415Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:226382..226449TCONS_00021077-exon-sc0000377-1491911889:226382..226449Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:224555..224955TCONS_00021077-exon-sc0000377-1491911889:224555..224955Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:224168..224244TCONS_00021077-exon-sc0000377-1491911889:224168..224244Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:222398..222527TCONS_00021077-exon-sc0000377-1491911889:222398..222527Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:221833..222092TCONS_00021077-exon-sc0000377-1491911889:221833..222092Clytia hemisphaericaexon
TCONS_00021077-exon-sc0000377-1491911889:216529..216997TCONS_00021077-exon-sc0000377-1491911889:216529..216997Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:216529..228630 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0990553	0.369455	0	0.0686117	0.319805	0	0.204614	0.0431813	0.111297	0	0.513883	0.160791	7.97443	6.53105	0.445576	0.0668041	0	0.508281	4.08327	9.35026	0	0.0610883	0.143418	0.16238	0.839203	1.58202	0	0	0	0
Blast
[Close]
BLAST of TCONS_00021077 vs. Swiss-Prot (Human)
Match: FA11 (Coagulation factor XI OS=Homo sapiens GN=F11 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.847e-47
Identity = 103/239 (43.10%), Postives = 137/239 (57.32%), Query Frame = 2 
Query:  923 RIVGGQNALPGEWPWQAFYIIRKGTRAFSCGGVLIHKKWVLTAAHCTVG-DGAFVSKLYLGEHERGKVDTGEQTPKVKRIINHEMYRLAPGTNSFDFALLELETEAQITDNVRTICIPKKHSGTDFDNQICDIXXXXXXXXXXXXANILQEASVRVYPQPECVGNY-GSRIGDSMFCAGYRDGGVDACQGDSGGPLQCKDGNKWVLWGITSWGIGCARPDRAGVYSKVTQVVDWIEEKT 1633
            RIVGG  ++ GEWPWQ        T+   CGG +I  +W+LTAAHC  G +   + ++Y G   + ++        V+ II H+ Y++A   + +D ALL+LET    TD+ R IC+P K    +     C +TGWG         N LQ+A + +    EC   Y G +I   M CAGYR+GG DAC+GDSGGPL CK    W L GITSWG GCA+ +R GVY+ V + VDWI EKT
Sbjct:  387 RIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAE--SGYDIALLKLETTVNYTDSQRPICLPSK-GDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 622
The following BLAST results are available for this feature:
BLAST of TCONS_00021077 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FA112.847e-4743.10Coagulation factor XI OS=Homo sapiens GN=F11 PE=1 ... [more]
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