TCONS_00021044 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021044
Unique NameTCONS_00021044
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3588

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021044 ID=TCONS_00021044|Name=TCONS_00021044|organism=Clytia hemisphaerica|type=transcript|length=3588bp
CAAGCATATCCTCCGTTTTATTAACACTCTTGTTATATCTCATAGCGACG
ACGTTCGTGTAAAGGTTTGTGTTGTGGAGAACGGGTGTAGCAAAGTACAC
GTATAACGCACCACTTGGCAGTTGGTATGGTTTTGTTGTGGCTTCGCTTT
TCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGATGGAACCCAAAGAtga
aagaagccattgtagtgcaatgtttacatttttggaaagttctaAAATGG
TAGAAGAAGCTCTGTAAATAAAAATTAGACTCTTTTACGTGTTGTGTCGT
TCACCACGTTGAGTTGAATTGtgaatagaaaaagaaagtagcATTACATG
AATCAAAATGACAGAAATGGTTATCATGCCAACAGATGAACGTATCCCAC
CGATGGGATCAGAAGCTGCAGATACACACTTCAATGAAACTGCTGCATAC
GATCCTAAATTAAATACAAGAGACTTATCACATAATAATAACAAACAATG
TATTCCTCATTACGAACATTGGAAGGACAGCTTACCAGATCTATTAGATG
ACACAGAaggatataaattattttacgAATTTCTAGAGCAAGATAAAAGT
ATCACGTTATTTGAATGTTGGTATTGCTGCAATCAATATCGTAACTTGCC
ACCAACTAGAACTAGTGCCAAAGACATTTATCATAGATTTGTAAAGAAAA
AGGACCCACATATTCCAATTTCTGAtcaagcaagaaataatttggtATTG
AGGATAAAGGCTAACGATATTACAGAAAAAATTTATGAGGAAATTGAAAA
GGAAGTTTACACTAATTTAAGGGACAtttgttatccaaaatttttaaaat
cagactGTTTTAATCAATATTGCGAAAGTTCTGGTCAAATGCGGTATGCA
GAATATAATACCGATTATGGAAAGCCATCAACAAAATATAGTGGAGTCCT
TGATCACATTGACAAGCATGACCAGTATCAACCTCAATCAAGATCAGAtT
ATGAAAGGCAGTATGAATGCGCCCGTCATCCACACCACGATCGAGTTCAC
GGACCCTCATCCAATTATGACGATCATCATAGCATGCCGTCAGATTATGA
TCGTAGCTCTATAACAGATTCCAAAACTTCCATggGATCAAGTAGTCGAC
ACGGTAGACCGTCTCGAGGTCACAATCGCGATTACGATGGACCAATGGAC
GTTAACAATTTCAAGCCGCGTACGCAGCGAATCAATCAAGATCGCATGAA
ACCGATGAAACCGACAGACTTTGCTGCACTTTTGAcgcaaaaacttgaaa
aagtttTGATCGACCGAACTAGAGATGGCCATGATAATTCGTCACACCAT
TCTCATGGTGACTCAATGGATCTGTCTTCAATGAAACATCATCTACCAGG
TGGACACAACAGTCGAGTACCACCCCACCATCAACCTCACATACACGATT
TCGATGGCCAGAGTGAGAGTGACGCCCAATCTTGGGTGCTCTCTGACCGG
CCAAGCGTCGCCGGACAATCATCACATAGTGGCTCACACAGTggtatttt
aatgaaaaataaagcaaaagaaCTCAGAGATAAAATTCATCATCATATTC
GAAGTGACTTGAAAGAATGTCGTTGTGCTGAGTGCCGCCTCACGCCCTCC
GTACATTCGGGCGGTCGTCACGAACACGATTCGCATGCACGACACGGTGG
CTCAGAACATGGTTTTTATCCACACAGTAGTAATAGTAACTCTTATAATT
ATTCCAATGATACAATACAAGACCGATACAATACAATGTCGTCATCATCT
CACCATCGTGGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATGC
TGCACCACCATTAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAACG
AACGTTACCAACATCAAAAATCGTACCCAGACCCCTCCCCGTCACCTTCT
TTACGTCGAAAGAAAGCACCTATACAATATAACACAAGTAGGTCACAGAA
CTCTCAACAGCCTATTGCGCAAGATACGGGCATGCCGTTATTACCACAAC
CTGACCCAGACAATGTTTTACAAGAGGTTAAACGGAAACTGGAAGAACCC
TCACGATCACAACAAAATCATCACCGATCTTCaagacaacaacaacaata
tcATACGCCCCATTATGAGGGCGGATACCACCCTCATCACGATAATCAAT
CAATGGCTTCTGCTCCTTGGTCGATGTCTGATAACTCTTCAATTATTTCT
TATAACCCTTCACAAGTTTCTACCGTACCTTCATCTGCGTCTAGATTATG
GAACGCTCAAGGTTATTACAAAGATGCCGGTAGTGAAGTCAGAGACGATC
GTTGCACGCCTAGCGAAGTTCACTCGCAAGCAGCTTCTAAACACAGCGGT
CCGCGTAGCGTGACACGTAGTGATCATATGAGCGCTGCACGCAGTGATCA
TCACAGTGACGTAAGATCACAATCGACGGGAATTAGTTACGGCAGTGACG
GTAGTAAAGGACGTTCTTCTTCttctaaaaataaaactgtTATCACGTAT
TATTACGGTAGTGAACCTATCCCGTACCGTATTAGCGTTCCGACTACGGA
GGTTACGTTGTCACAATTCAAACTCGAAACCAAACGTGGTAATTATCGCT
TTTTTTTCAAGACTGTTTCCAGTGTCGATGGTGAGGTTGTTTGGGAAGAA
TTCAAAAACGATGATGATGTCCTACCTAAATTTAATGATAAAATTGTTGG
CAAAGTCGATAAGATCTAATTGACTTTGGTTTTTGGATTTATTTGTTGTT
ATTGTTTGGATTATTTCTCTTAATGATAATCATGACGGAATTGTTGTTAA
TGTGGACCAAGTTTTGATTCTACCATAATGAACTTATaatatttatgacg
taatgttttaaacAGAAGCACCCTAAAAGACCAAACAGCCGGTCTAATTT
TGAATTAAACAATAAACTAGGCCCTGGCTATTTTGGGTGCTTGCGTCTGA
AAAATTCCGACATGAATGATTGATCATGAATTGATAAATgcgttgttttt
ttatatagaTCCTCGTGTTaatgattacgtcatgaatattattGTCCGCT
TGGTTATATTATCactgtcttttttttttcaaatttatgctCTGCATTTA
AAACTTTATCACTATTTATATTTTGCCAATTCTTCTACCCCTGTTTGATA
CCCCTAAatatttgttcaattttttaccTTCCTCGTACAGGTTCGGGAat
cgaaattcattttgacaaatttgaactttttgccaAGTGTCAAGATATTC
TTTCCTTGCTTACTCTTGGCTTTACCTTTCCAACTTTCTTCCTTTTTCCT
TTTATATTCCttcctaaattttttaaaatagatattttacaattttctcc
CTTTAAGTTAATATACAATATACTGAAaagagttttattttttactagAT
TTATCTTACTACCCCATGATTGTATGATATTTTAAGATAAACCCCGAAAT
ATACCCCTTTATAATTACACCCCAATATtgtgaaaaaatgaaataatatc
aaaaaatacaacaaaaggaaaaatgtgaaaattaacaa
Run BLAST on NCBI

transcript from alignment at sc0000377:136788..149964+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021044 ID=TCONS_00021044|Name=TCONS_00021044|organism=Clytia hemisphaerica|type=transcript|length=13177bp|location=Sequence derived from alignment at sc0000377:136788..149964+ (Clytia hemisphaerica)
CAAGCATATCCTCCGTTTTATTAACACTCTTGTTATATCTCATAGCGGTA
GgtttttttgtttgtatatAAGAAGCTTTTCCTATTCAATGACATGTCAT
ATAAATAATACTTGCCAAGAATGGTGTATATTTTGTCAATAGTAATAAAT
GAGTAGTGAAGGCATAGTCGGTAAACTTAACCAAGcatgttaatttttat
ttttcatacatGTTTCGATTTAATAATCATCATCAGTGTTTTTAGTTCTA
AAAATAGATAAATGTGTCACTTTGTCAATAGTATGATCCTGGTTGAAGAC
GACGTTCGTGTAAAGGTTTGTGTTGTGGAGAACGGGTGTAGCAAAGTACA
CGTATAACGCACCACTTGGCAGTTGTAAGTTATATTATTTGCTGGATACA
TAATGTATTTGTTGTCTTTAGGTTTGTTTGGGCTTGCTGAGGGGTTAGGT
CTGTGTAAACTTGCTTTAGGAAGATGATGTCGTGTTTCGACTGCATTTTT
ACCCTTATTTCAAATGATTACTAGTATGTCGCTACACCCATGTCTCATCT
CAGTATTGTACATCTGTACATATCACATTACTGTATCCTTTTAAGACTGA
GATTTCTGAACGGAACACAGGCCCAGCGGAAGCGGGAAGACTTaggagcc
ttcagcctccccactttaaaCCTTGAAGGGTTGTTCCACTGNCCCAGCGG
AAGCGGGAAGACTGaggagccttcagcctccccactttaaaCCTTGAAGG
GTTGTTCCGCTGGGCCTGGAATAGGAATATGGGCACTGATACATGAGTAA
GATGGGAGATTAAAGcataatacacttttttataagaaaaattttataag
aacaatgaggctcgaAATTGccacaaaataagaacaatactgagcctgga
attactcaatttcaagcaatttaggggtcagaTTAGTAAAAATtggatac
atgtttttttataagagcatccaaaatttttgaagcctgcgaatgaactt
tttgagttttaagcctataaatgttcttaacatgttcttattttgaccat
tttgttagtatttttgaccattttcctaagaaatagggtgttttttagtc
tacaaagccttgaaatgttcttaacttgttcttaacattttggccatcga
agccttatgttcttatatagtttgttcttataaaaaagtatacTGTAACG
CTTAAAACACCTCAATTACATCTTACaaaacaggataagaacaatttgag
gctcaaagtgccaaaaaataagaacagccgagcctcagccaaattttact
ggttcttataaaagaaagtgtaCAGCACACCAATGGTGATTTGGAATCAT
TTAGTGTTGGCTGGGATTGCCTTTAATTAGTATATCTAAAAGGTATTAGT
ACCAGAACTCCAAAGACCCGTGAGATAATAatttagttttaaaaacagtT
TCAGGAATTTGATCGGAAATGTAAAAATTTCACCTCCGTAAAAAGCGGTT
GTTTACTCAGTcagttaaaagttttgtttatacaagaatattttaaatat
tttctttgatatATGCAGTTTATAATTCAGTATAATGGTCAAATCGTGgg
aaaattgcttaaaataacATAATCACTCACCCATTTTACATATTCTATAG
TTCAGTGCGctttttttgttaaataaaaGATTACAGGAAGCGAATAGGGT
GTAACTATGGTAAATTGGTCTTTGATGGAAAGGCTTTTGCCGATCAAAAA
CAGCCATACACACATTGagtaaaagaaataaaaagtaaaagttaaATAAT
TCGTTATTGTGAATATATTCATCGATTAAATAATTtaacaaaaaaggttt
ttcgttctcattttttttataattttgatcaTAGTAACTCATTGTAAGGG
TTCTCGAAAATGCGATGAGAATGTTTTTAAGAAAACGCGTAATAAAGCAG
TAGCGACACTGTAATTAGGTGAATAGATGCGGTTCTTGATTTCATGATGG
TCCCTAAATATATTTTAGGAAAAACTATACAAAATGATACGAGTCTTGGT
TGGGTAAACCAAAGTATTCTAAACATTTCCATAGTGACCTCTtttcagaa
aaacattttttaataacaCAGTACGCAATCTTTATCCATATCTTATTGTA
CCTGTTAAGAGCATGCTAAAAATTAGCTTGTCGACAGAGGCGAAAAATGC
CGAAAACTCGCGAATTTTAGCTCTTCATTGCGCTCTTGAAGGCTCTGTCT
CCTATTCTTGTTTGCACGTCCTTCTTAAGTAAACTTTAGGTAAAGAAAAA
CGACACTGCACTTCTtgtaaaaaagcggttttctgtAACTCATATAATAA
ACactaaaaacaatttttttattctagTCTTTGCTTAAAGCGCGGCTAAC
AATAGAGAAGCAAAGTACTTTAAcacattcgaaaaaaaaagttcggTTAG
TTAAGTCCTGTGTTTGCTATTGCATAGAGTTTGCCGACCGACAGTTTTCT
CTCTTTCTATCTCATATAAGAAGGGAGATGTGGTTTCAGAGTAtaggttt
gagattttttttgtcTAGCTCCTACAAATTACCGTTTTTAATTAATTATA
ACAAGGAGAAGAGAAAAGAACGCTTTCTTTCGCACATGTGCTAAATCTTA
TTGTTAGTAGATATATGATAACAATAATGTCTTCTCCTATTGGTGCGGTT
TCTCCTCATCGCGCAATCTGATTGGTGCGGCTTTGAACAAAAGAAGTGAC
GTCGAGAGGTTACTACATAGCAAATAAACCGCTAGTGAGATCGGTTTCTT
TGATGTACTATGAAAAGCTAACAGACGTTCAAAGTTTTATATATATCTTT
GCTGGGTGCCGTGTAGCAGAGAGAGAGGAGATTTTTTATGTAGAGGATTC
AGGCGAAAGATgaatataataataacaatactAATAAAAAAGTAAGAGAG
AGAGAAAAGAGTTGAAGTGAagcagagagagagagagaatatATACACGA
GAATTTGGTTTTGTTGTGAGGGTTGTGAGCATGTAGTTATACATGTATTA
TATGAAAGGTCNGAGAGAATATATACACGAAAATTTGGTTTTGTTGTGAG
CATGTAGTTATACATGTATTATATGAGAGGTCGATATtacattttgtgct
tgttgttGTTctgcattttattttcataaaatatactGATAGATCCTCTA
GCTACTTGATATTAAGCTTTTGGTAAAATGATACGATATGGATTGTATGT
TTTGAGTGTATGTATGTGTATACATgtaattttatttcaaacaaagataa
tacaaatttcaattttttgcactGCAAAACACTGACATAATCCTAGTCAA
GTCAACAAAGAAAGGTTTGAAATCTCAAGAGGTTACCTTGCCAAATGATT
AGAGAAGAGAGAGAGAAGAAAAATACATGATATCAATTTGTTATACGGAT
GCTTCATAGAGTTTGAAAATTATAATCACACAAAATGGATAGATATAATT
GAACAATTAGATGgcttttttgatgttgtttaTGATGGCTCGTCAACTGA
AAGTCATCATTTTGTTCTGTGTTTTGTTTTGTGGATAGCCGCTGAGAATT
GGTTACTGTTACTTAGGGAGAACTAGctataaagaaagaaatttcaaaag
ttgaTGATTTTATAAAAGTTTGCAAACTCAACACGGTAAATCACTTACCG
AGAAATTGAACAAGCCTTGAAACGATTTCAACGATTGAAAGAAACCAGAA
AGGAACATACCAGCTAAGGGTTGAATTTTCTATTACATTTGTTGTTATAG
GGTATGGTTTTGTTGTGGCTTCGCTTTTCGCTCCCTGCCGCCTGCCGCCG
TCTGGCCTGGATGGAACCCAAAGAtgaaagaagccattgtagtgcaatgt
ttacatttttggaaagttctaAAATGGTAGAAGAAGCTCTGTAAATAAAA
ATTAGACTCTTTTACGTGTTGTGTCGTTCACCACGTTGAGTTGAATTGGT
TGGTTATATTTTAAAGGCTTGATTCATACTTTTGCTTTGATACATTTGAT
TCTCAATATCAACGTCATACTTTGAAGTTCTGTTTATCCTCTCAGTTAGT
ATATTTTAAGTTCACCTCTGATTGGATATATAAACACTGCCTCGAAAGAC
AACAGGAAACATATGATTATGAATGAAGGGTAGTGTTTTATAGGTAGTAG
AACCTAGAGGTGccttgtttttcatttgtttcatacTTCAATTGGTAATT
TTAGTGATTGCTAAAGTATTTGGAGAAGCATTTGCTCTCTGACTGGATGA
GGTGCTCTGCATTGTGGTGGTGGCGCACAAAcaatttttagtaaaaaaac
cATTCCTTTCATCTTTTAGtgaatagaaaaagaaagtagcATTACATGAA
TCAAAATGACAGAAATGGTTATCATGCCAACAGATGAACGTATCCCACCG
ATGGGATCAGAAGCTGCAGATACACACTTCAATGAAACTGCTGCATACGA
TCCTAAATTAAATACAAGAGACTTATCACATAATAATAACAAACAATGTA
TTCCTCATTACGAACATTGGAAGGACAGCTTACCAGATCTATTAGATGAC
ACAGAaggatataaattattttacgAATTTCTAGAGCAAGATAAAAGTAT
CACGTTATTTGAATGTTGGTATTGCTGCAATCAATATCGTAACTTGCCAC
CAACTAGAACTAGTGCCAAAGACATTTATCATAGATTTGTAAAGAAAAAG
GACCCACATATTCCAATTTCTGAtcaagcaagaaataatttggtATTGAG
GATAAAGGCTAACGATATTACAGAAAAAATTTATGAGGAAATTGAAAAGG
AAGTTTACACTAATTTAAGGGACAtttgttatccaaaatttttaaaatca
gactGTTTTAATCAATATTGCGAAAGTTCTGGTCAAATGCGGTATGCAGA
ATATAATACCGATTATGGAAAGCCATCAACAAAATATAGTGGAGTCCTTG
ATCACATTGACAAGCATGACCAGTATCAACCTCAATCAAGATCAGAGTAA
GTATACCTTGTTTAATAAACAATTTTTGGAAGGTTCAAGGCTCCAATTAC
ATCCATTAGAGTTTCTTCTCATTGATATAAAGTCAGGAGGAATCAGAGAA
ATTGTAATACAATAGGGATGAGCATACACCTTTTCTTATAACAACAATTT
ACAGAAAATGTGACTCAGTCTCATTTGTTATTGCAACAgaatttcagcct
gaaatgaaaaaataactaGCTAGAGGCACATTCTAAATTTCATGGTTTTC
ACAAAAAGAAATCTgcatcatgaatatttttgaattaagaagaccagata
ttttcaaaaatatcaatatgaCAACAAGTTGCATACTTTGCAATCTTTAT
AATCAAAACAGCATTCCTTTTCTTTGAAGAATACAACATTGATATTCTGT
AATTTCCTTGCTTTTATACAGATCTAATAGCTTTTCACGACGGTGCCTGA
GGATGTAAAGAGAGACTACATTGATTCCTCTCATAGCAGGAGAACACTTT
AGTTTATATAAGGACAGTAatgtttttaaggttttttaagaattctttta
aactggcacctttaaaactttattttccAGGATGTTTTACTTTTAAGCTT
TATTCTATGATGATTGCTTTgaatttatgttgttttttgaaCTGTTCTCT
TTCTCAATCTTCAAAAGCTTACGACGCCATTGTTTCATAGAGAGATCAAA
TTAGTATCAATTATGAGCAAAGCTTCAAAAAGAGATTCGGTTTTTTTTAT
TGCCGGTATGTAATAatcaaagataaagaaaaaacatagAATAGGATcat
gtagaattttttttcttttttaccaaATTGCCGTTTCCTTTTCACTGCAA
TTTTGGCTTAGGGAAAATATGTCGTTACTACAGGTCTAAATGGAACTTTT
TTGTTCATGTAATTTCTGATGACTAAAGATTACCATATTCAGAATATTTT
TGGTACTAATAACTTTAGGTACTGAATTTTACAGTATGTAAGGCTTCCTC
TTCTAATTGACAATTCATATATATTTCCAAAAAGATatagaaatgaagaa
aataccCTGAGAAGTTGATAATGACAAAATTCCTTTTGAACTATGATATA
TATAATCATGTTTCATTccctttattttcttatttttcattttttggtta
tcttttttatttcagttcaaaatttttcttgaaaatctttttccacAAGT
AGATGGTAGAAAGAAAgtttttccttttctctttttttttaatcatcaaa
ATTCCCCTCTCTATTCAACAATTCCTTTATGTTGTTGTGATACTCAAcgc
tttatacttttttttcatattttgcgataatgtctttttcttttcttgtg
tCCTACTTGTTTACATTACACACCAATATTTATCAcataaaaggaaagaa
aaacttAACCTTGCATTCCGGTGTAATACAGCCCTTAAAGTCGCCTGTCA
CTACCCTGTTATACTATTTATCATTTGATGTTATGTTgctgtttctcttt
ttttaatgaatttttttttcttcccctctatgttatgtttttctttcttt
tcactcagcataaacgtttcttataagaacaaagtatataagaacattac
atttcaaggtaaaaaatattaagaaaattctaagaacattttaaaacact
TTACAAACCCTAACATGCAATATCTTAGGAAATTACactaaagcactttg
aaatgtTTGCAatttgctgaaaataagaatatttcatattaatgttctta
tagaaaTAACGTGTACAATTTCTCAGTGTGTTTTCCTTTCACGGTTAAAA
GCCTCTCTGTATCGATTGGACCGCTTCCATCAAAAGACTTCGCACTAAAT
TACATGAAACTTTGTTTCAATCATAataaaagaacaacaaaaaatatTCC
TTGATGGATTGCAGCCACCTCATTATTACAATCAAAACCAATATTAATAT
ACtcctttgaaaattaattttaaaaattttccctttttttctctttacag
tTATGAAAGGCAGTATGAATGCGCCCGTCATCCACACCACGATCGAGTTC
ACGGACCCTCATCCAATTATGACGATCATCATAGCATGCCGTCAGATTAT
GATCGTAGCTCTATAACAGATTCCAAAACTTCCATGTAAGATTAACTCTA
ATATTTCTTTTTCGGCATAAATTGGAATCTTATAATGTATATGTCCTTAG
TTTTCTGAAACCATTGGCTATCAGTTCCCAATAGTTTAACCTAATTATTT
CCACTTTTTAAATGCCTCTAAAGCCtatgtttttcaaaactctATTTAGT
AAAgtactttctttttttatttagggGATCAAGTAGTCGACACGGTAGAC
CGTCTCGAGGTCACAATCGCGATTACGATGGACCAATGGACGTTAACAAT
TTCAAGCCGgtaagattttatttaaaatttcttcattacaAGTCCGAACT
TGATTCAAAGTAATCAAAGAACAGTTCTTTTAAACGATAAATCAATGATA
TAATATAACTGGGAACCTTTGGAATGTTTCTTTAATCTTCGGCAAAAAGA
GAGGGATAAGTTGTTGATACAAGCGTAACCCTTGGTTCCCATCTGATCTT
ATTGTGAGGCTTGAGTAGGTCCCCTGCTGTTCGAACAGACAACATTCGCT
TTGGTATGAAATATTCGATGCTTATTAGCACCCATTTTCGTTGTTTTGTT
TCATATTCAGCGTTTTTTTCTAACATTCGTGTCACTGAACTCGAACTCAT
TAAGAGCAATAACCTCGTTttcttaaacatttttttttttgtgttattGT
TGTCTAGGATTTTTACTTAGGCTTTATAGTACCGTTCTGTTtcttaaacg
tttttttatataataaggACTCATAAACGCCAAATTGCACACAAATTACT
CCCAATATGAtggtgaaaattaaaacattttaacaACAATTTCGGCTTAA
AACTcataaagttaagaacatcgagGGCTTAGAAAATTTgtacgttctta
taaaaaatcatttatgcCGTGTATTAAGACTTTAAGGTAGCCTGCTGCGA
AAGTGGATCACAgtgcttgttttcaaaaattctctTTGTGTTGGAATTCC
CTGTTCTATCTTTTGTATTCTGTGCGTGCCTTATGTTTTTCATCTAACAC
CGAGAGAgcagaaaaatgtttttataagaactagacAATTTTGGCTGAGG
CTGAGACTCGGATGAGGCTGTTTTTATCATTTCGTGATTTTGGttcaaat
gtttttgaaatggtctaaaaaatactttttctagCCATATTTGACAGTTG
AGATTGGCATATTATTTTTAGGTTATTGATAAAAAtcaagcctcatgttc
ttataaaaaacgtgaaaGATAGAGTCACTTTGCTTGTACATAGATGAAAG
AGCTCCCTTCACCGTAAGCTTAATCTTGTTTCTCTGTACGCGCTGATGCG
CTTTTCGAATAAGTCTCGATTTGAATCAACTATAACAATTTTGTCCCCTT
TTCTtgagttttataagaacaatgtatATTGTAAATAACCGAAGTCAAGT
ATATTTCCCCCTCCtttttaatgttcttataaagaattgAAGATGTACTA
TTAGAGCCTTCTCGTAAGGCTAGTACGCTAATGAAATTATATTCAGAAAA
CATCAAACAGAATAATTTTGTATCCAACACTATACTTCTTAAAACTTttc
ttaatgttttttcttcttaaaaaatcTTACTTGAAAgagatgtttttaaa
aatacattGCCGACTCAAGAGACTCAAGACCGCTCTTATATAAGATTACG
AGTCCGCAAAAATTGTCTTTACTTGCGTTTTCTTGTTGAACGTAACTGTA
GcgcatttttcttctttcttttaccTTATTAAGATTGTCAAAGAACATTT
TTCCCGCCCGTCCCGTCCCTTTCATTTTCNAACTGTAGcgcatttttctt
ctttcttttaccTTATTAAGATTGTCAAAGAACATTTTTCCCGCGCGTCC
CGTCCCTTTCATTTTCATAGCTTTTTCCCAATTCTTTAAACCTCTCTTTA
CCGAATTTcctcttttaatttttaaaggaCCTTAAAAGAGAATGCGCTAA
TATTTCTATTTCTTCGTTTATGACTCtttataaattaaattggatgaGTA
AAGAAGTTTTATTTCTTTCCTGGCCATAAGCCCTTCCAATACTGAAAAGT
TCCTTTTGCTAAGTAAACCTAAGCGCTTAGGCCCATAATTCTATATAATA
CCCATCTAGCATCAATTTGCTGTGAGATTTTATAGCCATAGCATAACATT
TCTtatcttttaaaagattttgtttttatgttaATAAGCTGTAGAAGCTG
TCTTGAAACCATAACAAAATTTGTGTGTCGGTATGTCTTGTGCATTATGA
GCCgtgatagaaaaaaataaatctttaaaaaacattgtttcaacgttcaa
acTAAATCCATTAAAAGAcgttccatatttctttttactCAAACACACTC
AAAAATATGGTTTTATTTTGCCTGTGATGACTTTTTTACGAATAATTTCA
TGCTTATACGCAAAAGATTAAGCAGGTTTAGAACCCCCAAAAGTCGCCcg
tcttaaaaaaaattgatttctcaattacaaaaaagaaatttgtaacAAGA
TCTAAATTCGCTAGTCTATTAACAAATTGATATGCCGACTCTTAAAACAC
GTGCacctttttttaagaaatttctcTGCTACGAGAAAAAACCCCtacat
attttgtttttgttatcaAATAGTCGCTCACAAAAACATTATGAAAAATA
AGttcaaaaaatgtataatttgatATCGTAAAGTCACTGGGCCGACAAAC
CGATTTTAAGAACACCGTCATTTTCATAAACAATAATTTTTTGCATCGCA
TTCTTTTCATCCTTGTTAAAAACGTTACGGTATTTCTTGCATACCTTTTG
GACTTTTCGGAAATTAAACCATATTGATGCAGTTTTCTTGGGaggaaaag
tattttttaaacatgGTATCAAACATTGGGGTCAGTCTTTCGATGACTAC
CATTAGTGTAAGATAAATTTTCTCGTGTAGCTTCCAGACCATAGCAACTG
TACTGTAGACTATAGTTCGTGNGCGACACGGTGGCTCAGAACACGGTTTT
TATCCACACAGTAGTAATAGTAACTCTTATAATTATTCCAATGATACAAT
ACAAGACCGATACAATACAATGTCGTCATCATCTCACCAACGTGGTTCCT
CGCGCACGCGTGAAACGCACCCGCATCCAGATGCTGCACCACCATTAGAC
ACTAGTAAAATTTATTCTTGGATGGAGAAAAANGTGTAGCTTCCAGACCA
TAGCAACTGTACTGTAGACTGTAGTTCGTGTCTTTTTGCCGCTGTCTCGT
TTCATACATACAAAACACTTGATGGAGACTACTttgaatataataaaaaa
attttccgaaattattttatttcttcttctttctttattATTAGCCTGGT
ATATAatctctcttttctttttctcttttaacaGCGTACGCAGCGAATCA
ATCAAGATCGCATGAAACCGATGAAACCGACAGACTTTGCTGCACTTTTG
AcgcaaaaacttgaaaaagtttTGATCGACCGAACTAGAGATGGCCATGA
TAATTCGGTAAGTGATTCTATAACAATCCTTATTTCTATCGTATCCTAAC
CGTATGAACTTCATGGATGAGTGTAAAGAATTCAATGTTTAAACTATATA
AATTgtaataaatctttttcaactttttttcaatatatgaCTGTTCACTC
TGAAAATTTACTTCGTTTTAGTTTCATTTCTTTATTTCGAGTTTTGCTGA
CCTGTCTTATAtcattcttttcttttataGTCACACCATTCTCATGGTGA
CTCAATGGATCTGTCTTCAATGAAACATCATCTACCAGGTGGACACAACA
GTCGAGTACCACCCCACCATCAACCTCACATACACGATTTCGATGGCCAG
AGTGAGAGTGACGCCCAATCTTGGGTGCTCTCTGACCGGCCAAGCGTCGC
CGGACAATCATCACATAGTGGCTCACACAGTggtattttaatgaaaaata
aagcaaaagaaCTCAGAGATAAAATTCATCATCATATTCGAAGTGACTTG
AAAGAATGTCGTTGTGCTGAGTGCCGCCTCACGCCCTCCGTACATTCGGG
CGGTCGTCACGAACACGATTCGCATGCACGACACGGTGGCTCAGAACATG
GTTTTTATCCACACAGTAGTAATAGTAACTCTTATAATTATTCCAATGAT
ACAATACAAGACCGATACAATACAATGTCGTCATCATCTCACCATCGTGG
TTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATGCTGCACCACCAT
TAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAACGAACGTTACCAA
CATCAAAAATCGTACCCAGACCCCTCCCCGTCACCTTCTTTACGTCGAAA
GAAAGCACCTATACAATATAACACAAGTAGGTCACAGAACTCTCAACAGC
CTATTGCGCAAGATACGGGCATGCCGTTATTACCACAACCTGACCCAGAC
AATGTTTTACAAGAGGTTAAACGGAAACTGGAAGAACCCTCACGATCACA
ACAAAATCATCACCGATCTTCaagacaacaacaacaatatcATACGCCCC
ATTATGAGGGCGGATACCACCCTCATCACGATAATCAATCAATGGCTTCT
GCTCCTTGGTCGATGTCTGATAACTCTTCAATTATTTCTTATAACCCTTC
ACAAGTTTCTACCGTACCTTCATCTGCGTCTAGATTATGGAACGCTCAAG
GTTATTACAAAGATGCCGGTAGTGAAGTCAGAGACGATCGTTGCACGCCT
AGCGAAGTTCACTCGCAAGCAGCTTCTAAACACAGCGGTCCGCGTAGCGT
GACACGTAGTGATCATATGAGCGCTGCACGCAGTGATCATCACAGTGACG
TAAGATCACAATCGACGGGAATTAGTTACGGCAGTGACGGTAGTAAAGGA
CGTTCTTCTTCttctaaaaataaaactgtTATCACGTATTATTACGGTAG
TGAACCTATCCCGTACCGTATTAGCGTTCCGACTACGGAGGTTACGTTGT
CACAATTCAAACTCGAAACCAAACGTGGTAATTATCGCTTTTTTTTCAAG
ACTGTTTCCAGTGTCGATGGTGAGGTTGTTTGGGAAGAATTCAAAAACGA
TGATGATGTCCTACCTAAATTTAATGATAAAATTGTTGGCAAAGTCGATA
AGATCTAATTGACTTTGGTTTTTGGATTTATTTGTTGTTATTGTTTGGAT
TATTTCTCTTAATGATAATCATGACGGAATTGTTGTTAATGTGGACCAAG
TTTTGATTCTACCATAATGAACTTATaatatttatgacgtaatgttttaa
acAGAAGCACCCTAAAAGACCAAACAGCCGGTCTAATTTTGAATTAAACA
ATAAACTAGGCCCTGGCTATTTTGGGTGCTTGCGTCTGAAAAATTCCGAC
ATGAATGATTGATCATGAATTGATAAATgcgttgtttttttatatagaTC
CTCGTGTTaatgattacgtcatgaatattattGTCCGCTTGGTTATATTA
TCactgtcttttttttttcaaatttatgctCTGCATTTAAAACTTTATCA
CTATTTATATTTTGCCAATTCTTCTACCCCTGTTTGATACCCCTAAatat
ttgttcaattttttaccTTCCTCGTACAGGTTCGGGAatcgaaattcatt
ttgacaaatttgaactttttgccaAGTGTCAAGATATTCTTTCCTTGCTT
ACTCTTGGCTTTACCTTTCCAACTTTCTTCCTTTTTCCTTTTATATTCCt
tcctaaattttttaaaatagatattttacaattttctccCTTTAAGTTAA
TATACAATATACTGAAaagagttttattttttactagATTTATCTTACTA
CCCCATGATTGTATGATATTTTAAGATAAACCCCGAAATATACCCCTTTA
TAATTACACCCCAATATtgtgaaaaaatgaaataatatcaaaaaatacaa
caaaaggaaaaatgtgaaaattaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011804XLOC_011804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021044-exon-sc0000377-1491911889:136788..136834TCONS_00021044-exon-sc0000377-1491911889:136788..136834Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:136788..136834TCONS_00021044-exon-sc0000377-1510915933:136788..136834Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:136788..136834TCONS_00021044-exon-sc0000377-1575043694:136788..136834Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:137086..137161TCONS_00021044-exon-sc0000377-1491911889:137086..137161Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:137086..137161TCONS_00021044-exon-sc0000377-1510915933:137086..137161Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:137086..137161TCONS_00021044-exon-sc0000377-1575043694:137086..137161Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:140588..140785TCONS_00021044-exon-sc0000377-1491911889:140588..140785Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:140588..140785TCONS_00021044-exon-sc0000377-1510915933:140588..140785Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:140588..140785TCONS_00021044-exon-sc0000377-1575043694:140588..140785Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:141157..141833TCONS_00021044-exon-sc0000377-1491911889:141157..141833Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:141157..141833TCONS_00021044-exon-sc0000377-1510915933:141157..141833Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:141157..141833TCONS_00021044-exon-sc0000377-1575043694:141157..141833Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:143838..143972TCONS_00021044-exon-sc0000377-1491911889:143838..143972Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:143838..143972TCONS_00021044-exon-sc0000377-1510915933:143838..143972Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:143838..143972TCONS_00021044-exon-sc0000377-1575043694:143838..143972Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:144162..144246TCONS_00021044-exon-sc0000377-1491911889:144162..144246Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:144162..144246TCONS_00021044-exon-sc0000377-1510915933:144162..144246Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:144162..144246TCONS_00021044-exon-sc0000377-1575043694:144162..144246Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:147372..147494TCONS_00021044-exon-sc0000377-1491911889:147372..147494Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:147372..147494TCONS_00021044-exon-sc0000377-1510915933:147372..147494Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:147372..147494TCONS_00021044-exon-sc0000377-1575043694:147372..147494Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1491911889:147718..149964TCONS_00021044-exon-sc0000377-1491911889:147718..149964Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1510915933:147718..149964TCONS_00021044-exon-sc0000377-1510915933:147718..149964Clytia hemisphaericaexon
TCONS_00021044-exon-sc0000377-1575043694:147718..149964TCONS_00021044-exon-sc0000377-1575043694:147718..149964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:136788..149964 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.00202449	0.000235497	0.00398009	0.00085914	0.00163049	0.000107752	1.17942	8.58818e-06	2.43796	3.70704	0	0	2.06192	4.09663e-05	5.86881	0.395379	1.08943e-06	1.84926	0	0.392832	1.60049e-10	2.11402e-05	0	1.96002e-10	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021044 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top