TCONS_00021043 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021043
Unique NameTCONS_00021043
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3929

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021043 ID=TCONS_00021043|Name=TCONS_00021043|organism=Clytia hemisphaerica|type=transcript|length=3929bp
aaagtcgGCTAGCAAGCATATCCTCCGTTTTATTAACACTCTTGTTATAT
CTCATAGCGTATGATCCTGGTTGAAGACGACGTTCGTGTAAAGGGTATGG
TTTTGTTGTGGCTTCGCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCC
TGGATGGAACCCAAAGAtgaaagaagccattgtagtgcaatgtttacatt
tttggaaagttctaAAATGGTAGAAGAAGCTCTGTAAATAAAAATTAGAC
TCTTTTACGTGTTGTGTCGTTCACCACGTTGAGTTGAATTGGTTGGTTAT
ATTTTAAAGGCTTGATTCATACTTTTGCTTTGATACATTTGATTCTCAAT
ATCAACGTCATACTTTGAAGTTCTGTTTATCCTCTCAGTTAGTATATTTT
AAGTTCACCTCTGATTGGATATATAAACACTGCCTCGAAAGACAACAGGA
AACATATGATTATGAATGAAGGGTAGTGTTTTATAGGTAGTAGAACCTAG
AGGTGccttgtttttcatttgtttcatacTTCAATTGGTAATTTTAGTGA
TTGCTAAAGTATTTGGAGAAGCATTTGCTCTCTGACTGGATGAGGTGCTC
TGCATTGTGGTGGTGGCGCACAAAcaatttttagtaaaaaaaccATTCCT
TTCATCTTTTAGtgaatagaaaaagaaagtagcATTACATGAATCAAAAT
GACAGAAATGGTTATCATGCCAACAGATGAACGTATCCCACCGATGGGAT
CAGAAGCTGCAGATACACACTTCAATGAAACTGCTGCATACGATCCTAAA
TTAAATACAAGAGACTTATCACATAATAATAACAAACAATGTATTCCTCA
TTACGAACATTGGAAGGACAGCTTACCAGATCTATTAGATGACACAGAag
gatataaattattttacgAATTTCTAGAGCAAGATAAAAGTATCACGTTA
TTTGAATGTTGGTATTGCTGCAATCAATATCGTAACTTGCCACCAACTAG
AACTAGTGCCAAAGACATTTATCATAGATTTGTAAAGAAAAAGGACCCAC
ATATTCCAATTTCTGAtcaagcaagaaataatttggtATTGAGGATAAAG
GCTAACGATATTACAGAAAAAATTTATGAGGAAATTGAAAAGGAAGTTTA
CACTAATTTAAGGGACAtttgttatccaaaatttttaaaatcagactGTT
TTAATCAATATTGCGAAAGTTCTGGTCAAATGCGGTATGCAGAATATAAT
ACCGATTATGGAAAGCCATCAACAAAATATAGTGGAGTCCTTGATCACAT
TGACAAGCATGACCAGTATCAACCTCAATCAAGATCAGAtTATGAAAGGC
AGTATGAATGCGCCCGTCATCCACACCACGATCGAGTTCACGGACCCTCA
TCCAATTATGACGATCATCATAGCATGCCGTCAGATTATGATCGTAGCTC
TATAACAGATTCCAAAACTTCCATggGATCAAGTAGTCGACACGGTAGAC
CGTCTCGAGGTCACAATCGCGATTACGATGGACCAATGGACGTTAACAAT
TTCAAGCCGCGTACGCAGCGAATCAATCAAGATCGCATGAAACCGATGAA
ACCGACAGACTTTGCTGCACTTTTGAcgcaaaaacttgaaaaagtttTGA
TCGACCGAACTAGAGATGGCCATGATAATTCGTCACACCATTCTCATGGT
GACTCAATGGATCTGTCTTCAATGAAACATCATCTACCAGGTGGACACAA
CAGTCGAGTACCACCCCACCATCAACCTCACATACACGATTTCGATGGCC
AGAGTGAGAGTGACGCCCAATCTTGGGTGCTCTCTGACCGGCCAAGCGTC
GCCGGACAATCATCACATAGTGGCTCACACAGTggtattttaatgaaaaa
taaagcaaaagaaCTCAGAGATAAAATTCATCATCATATTCGAAGTGACT
TGAAAGAATGTCGTTGTGCTGAGTGCCGCCTCACGCCCTCCGTACATTCG
GGCGGTCGTCACGAACACGATTCGCATGCACGACACGGTGGCTCAGAACA
TGGTTTTTATCCACACAGTAGTAATAGTAACTCTTATAATTATTCCAATG
ATACAATACAAGACCGATACAATACAATGTCGTCATCATCTCACCATCGT
GGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATGCTGCACCACC
ATTAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAACGAACGTTACC
AACATCAAAAATCGTACCCAGACCCCTCCCCGTCACCTTCTTTACGTCGA
AAGAAAGCACCTATACAATATAACACAAGTAGGTCACAGAACTCTCAACA
GCCTATTGCGCAAGATACGGGCATGCCGTTATTACCACAACCTGACCCAG
ACAATGTTTTACAAGAGGTTAAACGGAAACTGGAAGAACCCTCACGATCA
CAACAAAATCATCACCGATCTTCaagacaacaacaacaatatcATACGCC
CCATTATGAGGGCGGATACCACCCTCATCACGATAATCAATCAATGGCTT
CTGCTCCTTGGTCGATGTCTGATAACTCTTCAATTATTTCTTATAACCCT
TCACAAGTTTCTACCGTACCTTCATCTGCGTCTAGATTATGGAACGCTCA
AGGTTATTACAAAGATGCCGGTAGTGAAGTCAGAGACGATCGTTGCACGC
CTAGCGAAGTTCACTCGCAAGCAGCTTCTAAACACAGCGGTCCGCGTAGC
GTGACACGTAGTGATCATATGAGCGCTGCACGCAGTGATCATCACAGTGA
CGTAAGATCACAATCGACGGGAATTAGTTACGGCAGTGACGGTAGTAAAG
GACGTTCTTCTTCttctaaaaataaaactgtTATCACGTATTATTACGGT
AGTGAACCTATCCCGTACCGTATTAGCGTTCCGACTACGGAGGTTACGTT
GTCACAATTCAAACTCGAAACCAAACGTGGTAATTATCGCTTTTTTTTCA
AGACTGTTTCCAGTGTCGATGGTGAGGTTGTTTGGGAAGAATTCAAAAAC
GATGATGATGTCCTACCTAAATTTAATGATAAAATTGTTGGCAAAGTCGA
TAAGATCTAATTGACTTTGGTTTTTGGATTTATTTGTTGTTATTGTTTGG
ATTATTTCTCTTAATGATAATCATGACGGAATTGTTGTTAATGTGGACCA
AGTTTTGATTCTACCATAATGAACTTATaatatttatgacgtaatgtttt
aaacAGAAGCACCCTAAAAGACCAAACAGCCGGTCTAATTTTGAATTAAA
CAATAAACTAGGCCCTGGCTATTTTGGGTGCTTGCGTCTGAAAAATTCCG
ACATGAATGATTGATCATGAATTGATAAATgcgttgtttttttatataga
TCCTCGTGTTaatgattacgtcatgaatattattGTCCGCTTGGTTATAT
TATCactgtcttttttttttcaaatttatgctCTGCATTTAAAACTTTAT
CACTATTTATATTTTGCCAATTCTTCTACCCCTGTTTGATACCCCTAAat
atttgttcaattttttaccTTCCTCGTACAGGTTCGGGAatcgaaattca
ttttgacaaatttgaactttttgccaAGTGTCAAGATATTCTTTCCTTGC
TTACTCTTGGCTTTACCTTTCCAACTTTCTTCCTTTTTCCTTTTATATTC
CttcctaaattttttaaaatagatattttacaattttctccCTTTAAGTT
AATATACAATATACTGAAaagagttttattttttactagATTTATCTTAC
TACCCCATGATTGTATGATATTTTAAGATAAACCCCGAAATATACCCCTT
TATAATTACACCCCAATATtgtgaaaaaatgaaataatatcaaaaaatac
aacaaaaggaaaaatgtgaaaattaacaa
Run BLAST on NCBI

transcript from alignment at sc0000377:136776..149964+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021043 ID=TCONS_00021043|Name=TCONS_00021043|organism=Clytia hemisphaerica|type=transcript|length=13189bp|location=Sequence derived from alignment at sc0000377:136776..149964+ (Clytia hemisphaerica)
aaagtcgGCTAGCAAGCATATCCTCCGTTTTATTAACACTCTTGTTATAT CTCATAGCGGTAGgtttttttgtttgtatatAAGAAGCTTTTCCTATTCA ATGACATGTCATATAAATAATACTTGCCAAGAATGGTGTATATTTTGTCA ATAGTAATAAATGAGTAGTGAAGGCATAGTCGGTAAACTTAACCAAGcat gttaatttttatttttcatacatGTTTCGATTTAATAATCATCATCAGTG TTTTTAGTTCTAAAAATAGATAAATGTGTCACTTTGTCAATAGTATGATC CTGGTTGAAGACGACGTTCGTGTAAAGGTTTGTGTTGTGGAGAACGGGTG TAGCAAAGTACACGTATAACGCACCACTTGGCAGTTGTAAGTTATATTAT TTGCTGGATACATAATGTATTTGTTGTCTTTAGGTTTGTTTGGGCTTGCT GAGGGGTTAGGTCTGTGTAAACTTGCTTTAGGAAGATGATGTCGTGTTTC GACTGCATTTTTACCCTTATTTCAAATGATTACTAGTATGTCGCTACACC CATGTCTCATCTCAGTATTGTACATCTGTACATATCACATTACTGTATCC TTTTAAGACTGAGATTTCTGAACGGAACACAGGCCCAGCGGAAGCGGGAA GACTTaggagccttcagcctccccactttaaaCCTTGAAGGGTTGTTCCA CTGNCCCAGCGGAAGCGGGAAGACTGaggagccttcagcctccccacttt aaaCCTTGAAGGGTTGTTCCGCTGGGCCTGGAATAGGAATATGGGCACTG ATACATGAGTAAGATGGGAGATTAAAGcataatacacttttttataagaa aaattttataagaacaatgaggctcgaAATTGccacaaaataagaacaat actgagcctggaattactcaatttcaagcaatttaggggtcagaTTAGTA AAAATtggatacatgtttttttataagagcatccaaaatttttgaagcct gcgaatgaactttttgagttttaagcctataaatgttcttaacatgttct tattttgaccattttgttagtatttttgaccattttcctaagaaataggg tgttttttagtctacaaagccttgaaatgttcttaacttgttcttaacat tttggccatcgaagccttatgttcttatatagtttgttcttataaaaaag tatacTGTAACGCTTAAAACACCTCAATTACATCTTACaaaacaggataa gaacaatttgaggctcaaagtgccaaaaaataagaacagccgagcctcag ccaaattttactggttcttataaaagaaagtgtaCAGCACACCAATGGTG ATTTGGAATCATTTAGTGTTGGCTGGGATTGCCTTTAATTAGTATATCTA AAAGGTATTAGTACCAGAACTCCAAAGACCCGTGAGATAATAatttagtt ttaaaaacagtTTCAGGAATTTGATCGGAAATGTAAAAATTTCACCTCCG TAAAAAGCGGTTGTTTACTCAGTcagttaaaagttttgtttatacaagaa tattttaaatattttctttgatatATGCAGTTTATAATTCAGTATAATGG TCAAATCGTGggaaaattgcttaaaataacATAATCACTCACCCATTTTA CATATTCTATAGTTCAGTGCGctttttttgttaaataaaaGATTACAGGA AGCGAATAGGGTGTAACTATGGTAAATTGGTCTTTGATGGAAAGGCTTTT GCCGATCAAAAACAGCCATACACACATTGagtaaaagaaataaaaagtaa aagttaaATAATTCGTTATTGTGAATATATTCATCGATTAAATAATTtaa caaaaaaggtttttcgttctcattttttttataattttgatcaTAGTAAC TCATTGTAAGGGTTCTCGAAAATGCGATGAGAATGTTTTTAAGAAAACGC GTAATAAAGCAGTAGCGACACTGTAATTAGGTGAATAGATGCGGTTCTTG ATTTCATGATGGTCCCTAAATATATTTTAGGAAAAACTATACAAAATGAT ACGAGTCTTGGTTGGGTAAACCAAAGTATTCTAAACATTTCCATAGTGAC CTCTtttcagaaaaacattttttaataacaCAGTACGCAATCTTTATCCA TATCTTATTGTACCTGTTAAGAGCATGCTAAAAATTAGCTTGTCGACAGA GGCGAAAAATGCCGAAAACTCGCGAATTTTAGCTCTTCATTGCGCTCTTG AAGGCTCTGTCTCCTATTCTTGTTTGCACGTCCTTCTTAAGTAAACTTTA GGTAAAGAAAAACGACACTGCACTTCTtgtaaaaaagcggttttctgtAA CTCATATAATAAACactaaaaacaatttttttattctagTCTTTGCTTAA AGCGCGGCTAACAATAGAGAAGCAAAGTACTTTAAcacattcgaaaaaaa aagttcggTTAGTTAAGTCCTGTGTTTGCTATTGCATAGAGTTTGCCGAC CGACAGTTTTCTCTCTTTCTATCTCATATAAGAAGGGAGATGTGGTTTCA GAGTAtaggtttgagattttttttgtcTAGCTCCTACAAATTACCGTTTT TAATTAATTATAACAAGGAGAAGAGAAAAGAACGCTTTCTTTCGCACATG TGCTAAATCTTATTGTTAGTAGATATATGATAACAATAATGTCTTCTCCT ATTGGTGCGGTTTCTCCTCATCGCGCAATCTGATTGGTGCGGCTTTGAAC AAAAGAAGTGACGTCGAGAGGTTACTACATAGCAAATAAACCGCTAGTGA GATCGGTTTCTTTGATGTACTATGAAAAGCTAACAGACGTTCAAAGTTTT ATATATATCTTTGCTGGGTGCCGTGTAGCAGAGAGAGAGGAGATTTTTTA TGTAGAGGATTCAGGCGAAAGATgaatataataataacaatactAATAAA AAAGTAAGAGAGAGAGAAAAGAGTTGAAGTGAagcagagagagagagaga atatATACACGAGAATTTGGTTTTGTTGTGAGGGTTGTGAGCATGTAGTT ATACATGTATTATATGAAAGGTCNGAGAGAATATATACACGAAAATTTGG TTTTGTTGTGAGCATGTAGTTATACATGTATTATATGAGAGGTCGATATt acattttgtgcttgttgttGTTctgcattttattttcataaaatatactG ATAGATCCTCTAGCTACTTGATATTAAGCTTTTGGTAAAATGATACGATA TGGATTGTATGTTTTGAGTGTATGTATGTGTATACATgtaattttatttc aaacaaagataatacaaatttcaattttttgcactGCAAAACACTGACAT AATCCTAGTCAAGTCAACAAAGAAAGGTTTGAAATCTCAAGAGGTTACCT TGCCAAATGATTAGAGAAGAGAGAGAGAAGAAAAATACATGATATCAATT TGTTATACGGATGCTTCATAGAGTTTGAAAATTATAATCACACAAAATGG ATAGATATAATTGAACAATTAGATGgcttttttgatgttgtttaTGATGG CTCGTCAACTGAAAGTCATCATTTTGTTCTGTGTTTTGTTTTGTGGATAG CCGCTGAGAATTGGTTACTGTTACTTAGGGAGAACTAGctataaagaaag aaatttcaaaagttgaTGATTTTATAAAAGTTTGCAAACTCAACACGGTA AATCACTTACCGAGAAATTGAACAAGCCTTGAAACGATTTCAACGATTGA AAGAAACCAGAAAGGAACATACCAGCTAAGGGTTGAATTTTCTATTACAT TTGTTGTTATAGGGTATGGTTTTGTTGTGGCTTCGCTTTTCGCTCCCTGC CGCCTGCCGCCGTCTGGCCTGGATGGAACCCAAAGAtgaaagaagccatt gtagtgcaatgtttacatttttggaaagttctaAAATGGTAGAAGAAGCT CTGTAAATAAAAATTAGACTCTTTTACGTGTTGTGTCGTTCACCACGTTG AGTTGAATTGGTTGGTTATATTTTAAAGGCTTGATTCATACTTTTGCTTT GATACATTTGATTCTCAATATCAACGTCATACTTTGAAGTTCTGTTTATC CTCTCAGTTAGTATATTTTAAGTTCACCTCTGATTGGATATATAAACACT GCCTCGAAAGACAACAGGAAACATATGATTATGAATGAAGGGTAGTGTTT TATAGGTAGTAGAACCTAGAGGTGccttgtttttcatttgtttcatacTT CAATTGGTAATTTTAGTGATTGCTAAAGTATTTGGAGAAGCATTTGCTCT CTGACTGGATGAGGTGCTCTGCATTGTGGTGGTGGCGCACAAAcaatttt tagtaaaaaaaccATTCCTTTCATCTTTTAGtgaatagaaaaagaaagta gcATTACATGAATCAAAATGACAGAAATGGTTATCATGCCAACAGATGAA CGTATCCCACCGATGGGATCAGAAGCTGCAGATACACACTTCAATGAAAC TGCTGCATACGATCCTAAATTAAATACAAGAGACTTATCACATAATAATA ACAAACAATGTATTCCTCATTACGAACATTGGAAGGACAGCTTACCAGAT CTATTAGATGACACAGAaggatataaattattttacgAATTTCTAGAGCA AGATAAAAGTATCACGTTATTTGAATGTTGGTATTGCTGCAATCAATATC GTAACTTGCCACCAACTAGAACTAGTGCCAAAGACATTTATCATAGATTT GTAAAGAAAAAGGACCCACATATTCCAATTTCTGAtcaagcaagaaataa tttggtATTGAGGATAAAGGCTAACGATATTACAGAAAAAATTTATGAGG AAATTGAAAAGGAAGTTTACACTAATTTAAGGGACAtttgttatccaaaa tttttaaaatcagactGTTTTAATCAATATTGCGAAAGTTCTGGTCAAAT GCGGTATGCAGAATATAATACCGATTATGGAAAGCCATCAACAAAATATA GTGGAGTCCTTGATCACATTGACAAGCATGACCAGTATCAACCTCAATCA AGATCAGAGTAAGTATACCTTGTTTAATAAACAATTTTTGGAAGGTTCAA GGCTCCAATTACATCCATTAGAGTTTCTTCTCATTGATATAAAGTCAGGA GGAATCAGAGAAATTGTAATACAATAGGGATGAGCATACACCTTTTCTTA TAACAACAATTTACAGAAAATGTGACTCAGTCTCATTTGTTATTGCAACA gaatttcagcctgaaatgaaaaaataactaGCTAGAGGCACATTCTAAAT TTCATGGTTTTCACAAAAAGAAATCTgcatcatgaatatttttgaattaa gaagaccagatattttcaaaaatatcaatatgaCAACAAGTTGCATACTT TGCAATCTTTATAATCAAAACAGCATTCCTTTTCTTTGAAGAATACAACA TTGATATTCTGTAATTTCCTTGCTTTTATACAGATCTAATAGCTTTTCAC GACGGTGCCTGAGGATGTAAAGAGAGACTACATTGATTCCTCTCATAGCA GGAGAACACTTTAGTTTATATAAGGACAGTAatgtttttaaggtttttta agaattcttttaaactggcacctttaaaactttattttccAGGATGTTTT ACTTTTAAGCTTTATTCTATGATGATTGCTTTgaatttatgttgtttttt gaaCTGTTCTCTTTCTCAATCTTCAAAAGCTTACGACGCCATTGTTTCAT AGAGAGATCAAATTAGTATCAATTATGAGCAAAGCTTCAAAAAGAGATTC GGTTTTTTTTATTGCCGGTATGTAATAatcaaagataaagaaaaaacata gAATAGGATcatgtagaattttttttcttttttaccaaATTGCCGTTTCC TTTTCACTGCAATTTTGGCTTAGGGAAAATATGTCGTTACTACAGGTCTA AATGGAACTTTTTTGTTCATGTAATTTCTGATGACTAAAGATTACCATAT TCAGAATATTTTTGGTACTAATAACTTTAGGTACTGAATTTTACAGTATG TAAGGCTTCCTCTTCTAATTGACAATTCATATATATTTCCAAAAAGATat agaaatgaagaaaataccCTGAGAAGTTGATAATGACAAAATTCCTTTTG AACTATGATATATATAATCATGTTTCATTccctttattttcttatttttc attttttggttatcttttttatttcagttcaaaatttttcttgaaaatct ttttccacAAGTAGATGGTAGAAAGAAAgtttttccttttctcttttttt ttaatcatcaaaATTCCCCTCTCTATTCAACAATTCCTTTATGTTGTTGT GATACTCAAcgctttatacttttttttcatattttgcgataatgtctttt tcttttcttgtgtCCTACTTGTTTACATTACACACCAATATTTATCAcat aaaaggaaagaaaaacttAACCTTGCATTCCGGTGTAATACAGCCCTTAA AGTCGCCTGTCACTACCCTGTTATACTATTTATCATTTGATGTTATGTTg ctgtttctctttttttaatgaatttttttttcttcccctctatgttatgt ttttctttcttttcactcagcataaacgtttcttataagaacaaagtata taagaacattacatttcaaggtaaaaaatattaagaaaattctaagaaca ttttaaaacactTTACAAACCCTAACATGCAATATCTTAGGAAATTACac taaagcactttgaaatgtTTGCAatttgctgaaaataagaatatttcata ttaatgttcttatagaaaTAACGTGTACAATTTCTCAGTGTGTTTTCCTT TCACGGTTAAAAGCCTCTCTGTATCGATTGGACCGCTTCCATCAAAAGAC TTCGCACTAAATTACATGAAACTTTGTTTCAATCATAataaaagaacaac aaaaaatatTCCTTGATGGATTGCAGCCACCTCATTATTACAATCAAAAC CAATATTAATATACtcctttgaaaattaattttaaaaattttcccttttt ttctctttacagtTATGAAAGGCAGTATGAATGCGCCCGTCATCCACACC ACGATCGAGTTCACGGACCCTCATCCAATTATGACGATCATCATAGCATG CCGTCAGATTATGATCGTAGCTCTATAACAGATTCCAAAACTTCCATGTA AGATTAACTCTAATATTTCTTTTTCGGCATAAATTGGAATCTTATAATGT ATATGTCCTTAGTTTTCTGAAACCATTGGCTATCAGTTCCCAATAGTTTA ACCTAATTATTTCCACTTTTTAAATGCCTCTAAAGCCtatgtttttcaaa actctATTTAGTAAAgtactttctttttttatttagggGATCAAGTAGTC GACACGGTAGACCGTCTCGAGGTCACAATCGCGATTACGATGGACCAATG GACGTTAACAATTTCAAGCCGgtaagattttatttaaaatttcttcatta caAGTCCGAACTTGATTCAAAGTAATCAAAGAACAGTTCTTTTAAACGAT AAATCAATGATATAATATAACTGGGAACCTTTGGAATGTTTCTTTAATCT TCGGCAAAAAGAGAGGGATAAGTTGTTGATACAAGCGTAACCCTTGGTTC CCATCTGATCTTATTGTGAGGCTTGAGTAGGTCCCCTGCTGTTCGAACAG ACAACATTCGCTTTGGTATGAAATATTCGATGCTTATTAGCACCCATTTT CGTTGTTTTGTTTCATATTCAGCGTTTTTTTCTAACATTCGTGTCACTGA ACTCGAACTCATTAAGAGCAATAACCTCGTTttcttaaacattttttttt ttgtgttattGTTGTCTAGGATTTTTACTTAGGCTTTATAGTACCGTTCT GTTtcttaaacgtttttttatataataaggACTCATAAACGCCAAATTGC ACACAAATTACTCCCAATATGAtggtgaaaattaaaacattttaacaACA ATTTCGGCTTAAAACTcataaagttaagaacatcgagGGCTTAGAAAATT TgtacgttcttataaaaaatcatttatgcCGTGTATTAAGACTTTAAGGT AGCCTGCTGCGAAAGTGGATCACAgtgcttgttttcaaaaattctctTTG TGTTGGAATTCCCTGTTCTATCTTTTGTATTCTGTGCGTGCCTTATGTTT TTCATCTAACACCGAGAGAgcagaaaaatgtttttataagaactagacAA TTTTGGCTGAGGCTGAGACTCGGATGAGGCTGTTTTTATCATTTCGTGAT TTTGGttcaaatgtttttgaaatggtctaaaaaatactttttctagCCAT ATTTGACAGTTGAGATTGGCATATTATTTTTAGGTTATTGATAAAAAtca agcctcatgttcttataaaaaacgtgaaaGATAGAGTCACTTTGCTTGTA CATAGATGAAAGAGCTCCCTTCACCGTAAGCTTAATCTTGTTTCTCTGTA CGCGCTGATGCGCTTTTCGAATAAGTCTCGATTTGAATCAACTATAACAA TTTTGTCCCCTTTTCTtgagttttataagaacaatgtatATTGTAAATAA CCGAAGTCAAGTATATTTCCCCCTCCtttttaatgttcttataaagaatt gAAGATGTACTATTAGAGCCTTCTCGTAAGGCTAGTACGCTAATGAAATT ATATTCAGAAAACATCAAACAGAATAATTTTGTATCCAACACTATACTTC TTAAAACTTttcttaatgttttttcttcttaaaaaatcTTACTTGAAAga gatgtttttaaaaatacattGCCGACTCAAGAGACTCAAGACCGCTCTTA TATAAGATTACGAGTCCGCAAAAATTGTCTTTACTTGCGTTTTCTTGTTG AACGTAACTGTAGcgcatttttcttctttcttttaccTTATTAAGATTGT CAAAGAACATTTTTCCCGCCCGTCCCGTCCCTTTCATTTTCNAACTGTAG cgcatttttcttctttcttttaccTTATTAAGATTGTCAAAGAACATTTT TCCCGCGCGTCCCGTCCCTTTCATTTTCATAGCTTTTTCCCAATTCTTTA AACCTCTCTTTACCGAATTTcctcttttaatttttaaaggaCCTTAAAAG AGAATGCGCTAATATTTCTATTTCTTCGTTTATGACTCtttataaattaa attggatgaGTAAAGAAGTTTTATTTCTTTCCTGGCCATAAGCCCTTCCA ATACTGAAAAGTTCCTTTTGCTAAGTAAACCTAAGCGCTTAGGCCCATAA TTCTATATAATACCCATCTAGCATCAATTTGCTGTGAGATTTTATAGCCA TAGCATAACATTTCTtatcttttaaaagattttgtttttatgttaATAAG CTGTAGAAGCTGTCTTGAAACCATAACAAAATTTGTGTGTCGGTATGTCT TGTGCATTATGAGCCgtgatagaaaaaaataaatctttaaaaaacattgt ttcaacgttcaaacTAAATCCATTAAAAGAcgttccatatttctttttac tCAAACACACTCAAAAATATGGTTTTATTTTGCCTGTGATGACTTTTTTA CGAATAATTTCATGCTTATACGCAAAAGATTAAGCAGGTTTAGAACCCCC AAAAGTCGCCcgtcttaaaaaaaattgatttctcaattacaaaaaagaaa tttgtaacAAGATCTAAATTCGCTAGTCTATTAACAAATTGATATGCCGA CTCTTAAAACACGTGCacctttttttaagaaatttctcTGCTACGAGAAA AAACCCCtacatattttgtttttgttatcaAATAGTCGCTCACAAAAACA TTATGAAAAATAAGttcaaaaaatgtataatttgatATCGTAAAGTCACT GGGCCGACAAACCGATTTTAAGAACACCGTCATTTTCATAAACAATAATT TTTTGCATCGCATTCTTTTCATCCTTGTTAAAAACGTTACGGTATTTCTT GCATACCTTTTGGACTTTTCGGAAATTAAACCATATTGATGCAGTTTTCT TGGGaggaaaagtattttttaaacatgGTATCAAACATTGGGGTCAGTCT TTCGATGACTACCATTAGTGTAAGATAAATTTTCTCGTGTAGCTTCCAGA CCATAGCAACTGTACTGTAGACTATAGTTCGTGNGCGACACGGTGGCTCA GAACACGGTTTTTATCCACACAGTAGTAATAGTAACTCTTATAATTATTC CAATGATACAATACAAGACCGATACAATACAATGTCGTCATCATCTCACC AACGTGGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATGCTGCA CCACCATTAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAANGTGTA GCTTCCAGACCATAGCAACTGTACTGTAGACTGTAGTTCGTGTCTTTTTG CCGCTGTCTCGTTTCATACATACAAAACACTTGATGGAGACTACTttgaa tataataaaaaaattttccgaaattattttatttcttcttctttctttat tATTAGCCTGGTATATAatctctcttttctttttctcttttaacaGCGTA CGCAGCGAATCAATCAAGATCGCATGAAACCGATGAAACCGACAGACTTT GCTGCACTTTTGAcgcaaaaacttgaaaaagtttTGATCGACCGAACTAG AGATGGCCATGATAATTCGGTAAGTGATTCTATAACAATCCTTATTTCTA TCGTATCCTAACCGTATGAACTTCATGGATGAGTGTAAAGAATTCAATGT TTAAACTATATAAATTgtaataaatctttttcaactttttttcaatatat gaCTGTTCACTCTGAAAATTTACTTCGTTTTAGTTTCATTTCTTTATTTC GAGTTTTGCTGACCTGTCTTATAtcattcttttcttttataGTCACACCA TTCTCATGGTGACTCAATGGATCTGTCTTCAATGAAACATCATCTACCAG GTGGACACAACAGTCGAGTACCACCCCACCATCAACCTCACATACACGAT TTCGATGGCCAGAGTGAGAGTGACGCCCAATCTTGGGTGCTCTCTGACCG GCCAAGCGTCGCCGGACAATCATCACATAGTGGCTCACACAGTggtattt taatgaaaaataaagcaaaagaaCTCAGAGATAAAATTCATCATCATATT CGAAGTGACTTGAAAGAATGTCGTTGTGCTGAGTGCCGCCTCACGCCCTC CGTACATTCGGGCGGTCGTCACGAACACGATTCGCATGCACGACACGGTG GCTCAGAACATGGTTTTTATCCACACAGTAGTAATAGTAACTCTTATAAT TATTCCAATGATACAATACAAGACCGATACAATACAATGTCGTCATCATC TCACCATCGTGGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATG CTGCACCACCATTAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAAC GAACGTTACCAACATCAAAAATCGTACCCAGACCCCTCCCCGTCACCTTC TTTACGTCGAAAGAAAGCACCTATACAATATAACACAAGTAGGTCACAGA ACTCTCAACAGCCTATTGCGCAAGATACGGGCATGCCGTTATTACCACAA CCTGACCCAGACAATGTTTTACAAGAGGTTAAACGGAAACTGGAAGAACC CTCACGATCACAACAAAATCATCACCGATCTTCaagacaacaacaacaat atcATACGCCCCATTATGAGGGCGGATACCACCCTCATCACGATAATCAA TCAATGGCTTCTGCTCCTTGGTCGATGTCTGATAACTCTTCAATTATTTC TTATAACCCTTCACAAGTTTCTACCGTACCTTCATCTGCGTCTAGATTAT GGAACGCTCAAGGTTATTACAAAGATGCCGGTAGTGAAGTCAGAGACGAT CGTTGCACGCCTAGCGAAGTTCACTCGCAAGCAGCTTCTAAACACAGCGG TCCGCGTAGCGTGACACGTAGTGATCATATGAGCGCTGCACGCAGTGATC ATCACAGTGACGTAAGATCACAATCGACGGGAATTAGTTACGGCAGTGAC GGTAGTAAAGGACGTTCTTCTTCttctaaaaataaaactgtTATCACGTA TTATTACGGTAGTGAACCTATCCCGTACCGTATTAGCGTTCCGACTACGG AGGTTACGTTGTCACAATTCAAACTCGAAACCAAACGTGGTAATTATCGC TTTTTTTTCAAGACTGTTTCCAGTGTCGATGGTGAGGTTGTTTGGGAAGA ATTCAAAAACGATGATGATGTCCTACCTAAATTTAATGATAAAATTGTTG GCAAAGTCGATAAGATCTAATTGACTTTGGTTTTTGGATTTATTTGTTGT TATTGTTTGGATTATTTCTCTTAATGATAATCATGACGGAATTGTTGTTA ATGTGGACCAAGTTTTGATTCTACCATAATGAACTTATaatatttatgac gtaatgttttaaacAGAAGCACCCTAAAAGACCAAACAGCCGGTCTAATT TTGAATTAAACAATAAACTAGGCCCTGGCTATTTTGGGTGCTTGCGTCTG AAAAATTCCGACATGAATGATTGATCATGAATTGATAAATgcgttgtttt tttatatagaTCCTCGTGTTaatgattacgtcatgaatattattGTCCGC TTGGTTATATTATCactgtcttttttttttcaaatttatgctCTGCATTT AAAACTTTATCACTATTTATATTTTGCCAATTCTTCTACCCCTGTTTGAT ACCCCTAAatatttgttcaattttttaccTTCCTCGTACAGGTTCGGGAa tcgaaattcattttgacaaatttgaactttttgccaAGTGTCAAGATATT CTTTCCTTGCTTACTCTTGGCTTTACCTTTCCAACTTTCTTCCTTTTTCC TTTTATATTCCttcctaaattttttaaaatagatattttacaattttctc cCTTTAAGTTAATATACAATATACTGAAaagagttttattttttactagA TTTATCTTACTACCCCATGATTGTATGATATTTTAAGATAAACCCCGAAA TATACCCCTTTATAATTACACCCCAATATtgtgaaaaaatgaaataatat caaaaaatacaacaaaaggaaaaatgtgaaaattaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011804XLOC_011804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021043-exon-sc0000377-1491911889:136776..136834TCONS_00021043-exon-sc0000377-1491911889:136776..136834Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:136776..136834TCONS_00021043-exon-sc0000377-1510915933:136776..136834Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:136776..136834TCONS_00021043-exon-sc0000377-1575043694:136776..136834Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1491911889:137069..137102TCONS_00021043-exon-sc0000377-1491911889:137069..137102Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:137069..137102TCONS_00021043-exon-sc0000377-1510915933:137069..137102Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:137069..137102TCONS_00021043-exon-sc0000377-1575043694:137069..137102Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1491911889:140588..141833TCONS_00021043-exon-sc0000377-1491911889:140588..141833Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:140588..141833TCONS_00021043-exon-sc0000377-1510915933:140588..141833Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:140588..141833TCONS_00021043-exon-sc0000377-1575043694:140588..141833Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1491911889:143838..143972TCONS_00021043-exon-sc0000377-1491911889:143838..143972Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:143838..143972TCONS_00021043-exon-sc0000377-1510915933:143838..143972Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:143838..143972TCONS_00021043-exon-sc0000377-1575043694:143838..143972Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1491911889:144162..144246TCONS_00021043-exon-sc0000377-1491911889:144162..144246Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:144162..144246TCONS_00021043-exon-sc0000377-1510915933:144162..144246Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:144162..144246TCONS_00021043-exon-sc0000377-1575043694:144162..144246Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1491911889:147372..147494TCONS_00021043-exon-sc0000377-1491911889:147372..147494Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:147372..147494TCONS_00021043-exon-sc0000377-1510915933:147372..147494Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:147372..147494TCONS_00021043-exon-sc0000377-1575043694:147372..147494Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1491911889:147718..149964TCONS_00021043-exon-sc0000377-1491911889:147718..149964Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1510915933:147718..149964TCONS_00021043-exon-sc0000377-1510915933:147718..149964Clytia hemisphaericaexon
TCONS_00021043-exon-sc0000377-1575043694:147718..149964TCONS_00021043-exon-sc0000377-1575043694:147718..149964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:136776..149964 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.182893 0.0322515 0 2.33208e-05 1.00727 1.39539 1.45746e-10 1.19897 1.35358e-05 0.933581 4.33073e-07 3.10228e-08 0.678382 1.66989 1.19539 0.00362253 0.0108921 0.757317 1.69955e-07 1.36266e-07 0 0 7.56177e-10 1.47927e-08 4.22963e-10 0.756844
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021043 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top