TCONS_00021032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021032
Unique NameTCONS_00021032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2783

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021032 ID=TCONS_00021032|Name=TCONS_00021032|organism=Clytia hemisphaerica|type=transcript|length=2783bp
CAAAGAGTTCGTAACGCAAAGCAACTTGGTTTAAATTTGACCACGagtga
gaaattcaagaaacaTCAACGTCTTGATCCTGATATCAAACATCTTTTTA
AGGTGATGTTGATTGGTGACAGTGGTGTAGGGAAGACATGTGTTTTAATC
CGATTCAAAGATGGCGCATTTTTAAGTGGTAGTTTCATCTCGACTGTAGG
AATTGACTTTAGGAACAAAACCATAAACGTGGACGGGAAGAAAGTCAAGT
TACAAATTTGGGACACAGCCGGACAAGAGAGATTTCGAAGCATCACGCAT
GCATACTATAGAGATGCACATGctCTATTGCTGCTTTATGATGTGGGTAG
CAGAAAATCATTCGAAAACACGAGGGCGTGGTTATCAGAAATTAGAGAGT
ATGCACCAAATGACGCTGTCATTATGTTGCTCGGCAACAAGTGTGATTTG
GCAAAAGAAAGACAAGTCAAAAGGGAGGAAGGTGAAAAATTAGCGCAGGA
TTATAATGTACCATTCCTGGAAACAAGCGCAAAATCGGGGCTGAATGTTG
ATCTAGCGTTCGAAGCTGCTTCAAGaGAATTAATGAATATAGAAGCACGC
GGTAAAGAACACAATGGAAAATTTAATATTGGACAATATGTTTCAGAGAA
AGAACAAAAGCCTGGATGCTGTGGGTAATAAAAGAGTATCTTTAGCCTGC
ATTCTGTTCCACTTAGATGTTATTTATCATTTTGGAAGAAGGCGGGAGAT
ACCAATAATAGCCAATTGTAGGGCATGTTAAATTATAAAGTCAAATATGA
AATAAATAGAGGAATTATTCTGGAAGCCATTCCTATCTTATGGAAAAGTG
CAGTGACTATTCCTTTCTGAGTGGTCctggtttttgtttttgaagataCA
AATTACCTTTGAATTGACTGTTTTGGACTAACGAGATCTGTAAGGGTTTT
GGTTTGACGAGATCTGTAAGGATTATAGTATCGCAGATCCATTGTCAACT
TGTGCTGGTTATGACTGATAGCAAGATGGAAAAATAATGATAAGCTTGGT
TAGACTGAAAAGGTGCTGCTTTGAATTTGATCAGTCGTTTTGGTATAGCT
TCttccttttgtctttttttttaatttggtttCCTTCTAAAGCATagata
taattattttttcgatacagtatatatttttcgtctttatattttgtttt
ttttcttacgAAACAAGATGTTTTGGATAGATTTAGAacgttttttgaaa
tatttttttagcaaaaaagtatagattttttctttaatttttcaatattt
ttttggaaCGTTTCTATAGTATAAtctattttcattatttatgCTGCATG
CACCaggtttatatttttcttttagccggattttaataaagaaagctttt
ttttcaaatgactgCTTTAGTCAGCCTACGATACCATACAAATAAGAATT
TGTTGACTTGATTTATCCAAAATAAATTGGTTCAGCTTCTGCCTGGTGCC
ACCCAAATTTTCCGAAATGAATCAAAACAATTGTTTGACGCCTTTGTCCG
GGATTATTTTTACCTCAGACTCAAAATATTACGTTAGGTTCATCTTACCA
ACTTTTtgttagaaaattaaaaaattatttaaattttgTCCTGTAATGTT
atgtcaaaatgtttttttgcaatGAGTTTTTGAACTTAAATGAATTTTAT
TAAGTGTAATTCACTACTTTCTAAAAGTACATGGAGAAAATGTTCGGATT
CCAGAGCTTAATCAAATGCGATTGGTTAGTCTTAATATCCAAAAAGGTCT
TAAGTCTAACCTTATCTAAGCAATAGCTATACAAAGGAATACTGGTTTTT
TCTCAGCGGCTTGTATCTAAGAGAGAAAagcaaaaatgaggttttctaCC
ACTCGTCATtattaattttacttttctttttgtcttttatgttaattttt
tggtttttaattattttttttttaatgaaggTTGTTAATTTTAGGTTAAT
AAAAACTTTAGATACTACTGTTGTGATGTTTTGCTGTACATAAAGTATTA
TGATAATTTGGAAGTTCATTTGTTACTTTGTTTCggttattttggaaatt
tgttatGTTTTAATTATTGTAGTAATCTCCAGATTTTCTGGTTTGTATTT
TTCTAGTTTACTATAATTTTACGAAAGTATTTTCAATTCGCACGAAGTTA
TTATACCTTTACTTCAGAGCACTTCACTTGGTTATTTTACGCTTCGCTTC
AATTGTATAGAAAGGGACTAGCGTATAGGAGCTTACCACATTTAAACAAA
AAACCGAATGTTTTGAGTCTGAGAACCAAGTCACCAAGTGAGCGTATTGA
GCTTTATATAGGATGAAGGAGGATGAAGCCTAAAACCCGGATAAACCATA
AGTCATCAAAACCTAgatattttcatttcataatGGACATCATCTTATAT
CTATCACCAAATTTTTGTTCATATATTTATTAGTACTGGTATATAATCAT
TATCACATGCATTTTTTGcgtattattttctttaattacttttattttgg
tttaactattatatttttttaaaaagtcaaagaatAAACTGGAGTTACAT
CACGAAAATTTTATAACCATAAAATGATAATTATTTAAGTATCTTTTAAC
TGAATTTCGGTTATAGTCTTATTTTTCTAACAACTCTATGTACCAAGTTG
GCACATATACCGTTTTAACGCCTATCTAACAGACGTGGTCAGTGCACACT
ATAGAATTAGCAATTCATTTGAACGTTATTGGC
Run BLAST on NCBI

protein sequence of TCONS_00021032-protein

>TCONS_00021032-protein ID=TCONS_00021032-protein|Name=TCONS_00021032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
QRVRNAKQLGLNLTTSEKFKKHQRLDPDIKHLFKVMLIGDSGVGKTCVLI
RFKDGAFLSGSFISTVGIDFRNKTINVDGKKVKLQIWDTAGQERFRSITH
AYYRDAHALLLLYDVGSRKSFENTRAWLSEIREYAPNDAVIMLLGNKCDL
AKERQVKREEGEKLAQDYNVPFLETSAKSGLNVDLAFEAASRELMNIEAR
GKEHNGKFNIGQYVSEKEQKPGCCG
Run BLAST on NCBI

transcript from alignment at sc0000377:110189..117324+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021032 ID=TCONS_00021032|Name=TCONS_00021032|organism=Clytia hemisphaerica|type=transcript|length=7136bp|location=Sequence derived from alignment at sc0000377:110189..117324+ (Clytia hemisphaerica)
CAAAGAGTTCGTAACGCAAAGCAACTTGGTTTAAATTTGACCACGagtga
gaaattcaagaaacaTCAACGTCTTGATCCTGATATCAAACATCTTTTTA
AGGTAAATAATAGTATAACCTGTCCCACCCCTTCCaagatttgttttttt
gtaaaatcttgcCGTTTGTCGGTCTGAATTTTGTGTTTCGCTAGTACTAA
ATTTTTAGTATATACCAACTTTTTGGTAATAAATCATCGAAAAACAGGTG
CGTTGGTAGGAGTgctctttttttaagaaaatatacCATTTCACTGAAGT
GGATAAAGTGACGTCACTTAGTTTAAGAAGTTTACTACATCGTAgagccc
gggggtactaggtttgcgaggtgacgtgtatgtccgagccaaaaatcgaa
aatcgacccttagagagaggaCAAATTTGCGTTTTTGGGAcgcttagaga
gactttttccaaaatgagaggaaaaattgacgtttttggaCCCTTATAGA
GAATTTTTGTCGATTCTAATCATTTTTTGTCCAAATCTTTGAAAATCACG
ACACCtttgaaagaagaaatttcgattttcgtgaattttggacccttaca
gagactgctttttaattgttttgtacccctttgagagactttcgtgAGTG
TGAAAAAGGGAACCTTATGGCTCGTATATATCCGGTAcctattttgccta
agtacccatTCCTCCCCGGGTCGTAGGGGCAACTGCCTTTCAGTTTCTTC
CACATTTTACAATGGCTATTATTAACAAAATgattaaattaaataaaaaa
gttatacTAAAAAATGCTGCAAAAACAAAGCCCCTGGATAACTGACCGAG
CTTGCAAATTTCCGGAAAAGAATAGACAGCTCTTAGCTTTTGTGTTTATG
CTGTAAAAAAGGTGTAAGGTATAGGACAgtttgaaatgataatttttaaG
TCTGAAAGCGGTTTGCCGCTTGATGCGTTAGAGAAATGATTTTGCTTTAT
AGCGCCTTTGGAAGAATCTGCTCATTTGACTTTTAAAATACAGTTTACAG
GCTTACAAAACCAACCTTTACgcaatgcaattttttttttgattcagCAG
TAAGTTAGGTTGGCACCTTCAGCAGTTAGAGGGTACCTCATCAACATTTT
ATATATGAATGTTTTGCAAACTCTGCAGACCTATTTAGATTAaccttttc
taaaaaaatcttatttgatAAAGGTATGTGATCCATAGAGAGCTAAACCT
GTTGTCAAATTGCAATTTAACTTCATCCAACAAAATACTTTGTGAAAATA
CTAGTAGTTTCATAAAACGTCCAACCATGAAGTGTCTTAatctttccagc
gcgcaacatttttctgaaaaatttaaaaattgccttgtttttttttaacc
atCTCTATAAACTGGTATAAAAGCCTGTAACTTGATAGTTATAcaatggt
tttggtaccattagaaaggtatttttataatctttataAAAGCATTAGGT
GTATGCAAATGGTCATCGGAGTTATAGCCTTAAGTCTGGGACACTGTATA
TTGACAAATTTAGAACATGTATAGACGTCACTCGGGTTTGAAGGGTTAAA
ACCTTATCATTTGTATATTTGACCAAAGTTCAGCTAGCAGCATCTAACTT
TCATTTATTGAGGTTCAAAACCTTTGTCTTGATGTGGGTACAATCAAAAT
CGTTTTTCGTTTTGCCCTTCCGTCTTTTTCTCGCTTTATTCATAAGCCCA
GTGCATCGCTGCATAGAAGTCTCTATAGATTATGTTAGTTCATGAATATT
TTATTCGATGAAAACAAGTTTAATATACTCCATCACCGCGGTGCTACCCC
CTTTTTCTCGTTTTTCAATTGAAGTTCACTGAAAAAAACGGGAAGAATAA
AATTCTGTTTGTACGAATGATTCTCAAAGAATGTTTTTCTATGATGTCTT
TTATGATGATagatttgaaacatttttgttgCTTGCGAAATCTCGGCTAA
AGTGAAAAGCGTAAAATTTACAAtaacaatattttttaaatctacCTCAT
CACGGGCCAACCTTGCAAGGTCGACTTAAATACGTAATCTTGACTGAAGT
TGTTTTTTGTTGCTGGTTGAGGGGAGTTTGTTTGAAGACTGAAGAAAAGC
ATGGTGGGATTCGGAAATATTGAAAAAGGAGTTGATAAAGCATTCTATGT
AAATCAAATTTGTTCATCTTTTGATAATTAAATTTGGTCTAGCTAGGCTT
GAGCCAAACTTGAATTTGAGGATCAAAATTGATCTTATACTTACcaaaaa
aatacctttcaaaaacCTACGCTAAAAAGTTTCTGCAGAAAGCTTCTTCC
GGCACCGCTTTTAAACAAACGGTGAAAtcgaaaatattcttgaaaaaGTT
TGTGGTGTGCTCCAATGACAATGATCCTAAAGAAACTTCTATTCCTCGAT
TAGCCCTTCCCCGATCAATTACAAGGATTTGTACTGAAAacttttccttc
atttttcagGTGATGTTGATTGGTGACAGTGGTGTAGGGAAGACATGTGT
TTTAATCCGATTCAAAGATGGCGCATTTTTAAGTGGTAGTTTCATCTCGA
CTGTAGGAATTGACTTTAGGGTAAGGCGACGAATAATTTAATTTGATTCA
TTTAAGTTTtcatatattcttttatttcaaCTGAGCGTACACGCCCAATG
TCCCTTTCGAGTCTCTTATTCGGGCGGGAATAACAGGGCGGCATGGATCA
CGTCGCTCCTAGTACCCTGCAAAGCCGTAGAATTGAAGAAACCGTGGAAT
GATATTTTTTGCATGACTTTGTAAATCTTTTAAATTCTATTTTAGAACAA
AACCATAAACGTGGACGGGAAGAAAGTCAAGTTACAAGTGAGCTCCAGAT
TTAAAAACTTCCgatatttcttgaaatttttattttaagccTCTCTCATT
AAATTCGAATCGTTTGCTATCGTTGTAAGATTCATTTATACGCATTTTAC
AGGGTAGGCCTtaattgaaaaaagattgaTTGAGACTTTAAGCCCCTTGA
GATTTCCAGCTTTCAGTATCTAGTTCGACTTTGGGAGGGCTTGGGCTGAG
GTTAGTAACTACTGAGGCCCTCGAAGACTTTATGTTTTATGCTTGTTCGT
TTTGCTAAAAATTGACAAGAAACTTTAGGCGATTCTAGTTCGTTTAAAGT
ACATGATTAATGAAACCTTTAAGATAAGTTCTATCTCTTTTATTCCAATA
GATTTGGGACACAGCCGGACAAGAGAGATTTCGAAGCATCACGCATGCAT
ACTATAGAGATGCACATGGTAACCTTTTTTTCAAGCAGTTGAATTATGAA
ATGTCTTAAAAATCTTGAAAGCAACTAAGATTTCCTCAAAGAGAAGCTGG
GGAACCCCAAACTCTAAAATCCCCAAAACTATTGGCTTTTCTCTGtgaat
cattatttttcaattttttttctagctCTATTGCTGCTTTATGATGTGGG
TAGCAGAAAATCATTCGAAAACACGAGGGTACGAACAATACTTATTCTAT
TTAAATTCTGCCGTAATTTTTTATTAATACTTAATACTAATAATCTTTGA
GTTTTAAGTAAGAGTGTTGAATTTTGTGGTGTTTTGATTTTgtctgaaaa
caaaacaaaacacaaaaaaatttgaaatcaaaagccCTGACTGCCTCAAA
GTTACGCAACGAGTTTGCGTAATATTTACGCATTTTAGTCGATCAGAGTT
TAAATATGGCAATTAATTGTGGTGACCGAGTGCTCAAAAGATCAATCAAT
TCCAGATAACACAAATTTCAAATCGTTTCTTTGAGTCAGAGTTGGTATAA
ACGATTTTTCTTGTGCGATTCTTtcatcattcattcattcattcattcat
tcatttattcattcattcctATTTTTTAGGCGTGGTTATCAGAAATTAGA
GAGTATGCACCAAATGACGCTGTCATTATGTTGCTCGGCAACAAGGTAAC
ACATAATAAACTTAATTACTAGAATAAATATGCATCtgtatgttttttat
aatgttccaagtatttcaaaatctttagaGCTCTCACTTCCATTGAACTT
GCTTCGATTGGTATGTAAAATGTTGTGGAGATGTCTGTTCCCTCAAAAGT
TTTGACCAACTCTGTCCCCCAAAGCTTGATTTTTGACCCTCGTATATTTT
CGATTCCTTTTAGTGTGATTTGGCAAAAGAAAGACAAGTCAAAAGGGAGG
AAGGTGAAAAATTAGCGCAGGTACGTGTTAAGATGAGCactacatgtttt
tattttataagatttgtgtttttcattttatcataGATTTTCTTATAGAG
TATATTCTTACAAAAAGCGTGTAAACTCGGTAATCTTTCGGCTAGCGTAC
CCTCTTTACTTCTTATTGTTCTATTGTTCTACCAGTCGTCTCAAAAAACT
GAGTAattatttttgtgtttgtttgtcCACAAAGTTTTGAAACTTACTGT
ATTCTTCTTGTTAAGGATTATAATGTACCATTCCTGGAAACAAGCGCAAA
ATCGGGGCTGAATGTTGATCTAGCGTTCGAAGCTGCTTCAAGGTATCTTT
CATCTTTCACTGCCCTATTTTCTTCTCTATCGTATTTGCTATCCAGAACA
ACAAGGCAAGCAagatttaaaacttttagactAAAAGTCAGGTTGCTCGG
CACCTGTGGTCAAGAGTGTCAGCTAAACTCCCATTTCTGACCTAACACCA
TACCATTAAAGACAAGGGTCAAGGATAGGTTAACAAATCCAGGGGAATAA
AATGAACTTTGACTGCGATGTTCTTCGAATCTTACTCTCACTAAGAAATG
TTCGTATAATACTTTATATAATTCTAGTATTTCGAAAGTAAATCAAATCC
GATaacacattttttttgcttttttcagaGAATTAATGAATATAGAAGCA
CGCGGTAAAGAACACAATGGAAAATTTAATATTGGACAATATGTTTCAGA
GAAAGAACAAAAGCCTGGATGCTGTGGGTAATAAAAGAGTATCTTTAGCC
TGCATTCTGTTCCACTTAGATGTTATTTATCATTTTGGAAGAAGGCGGGA
GATACCAATAATAGCCAATTGTAGGGCATGTTAAATTATAAAGTCAAATA
TGAAATAAATAGAGGAATTATTCTGGAAGCCATTCCTATCTTATGGAAAA
GTGCAGTGACTATTCCTTTCTGAGTGGTCctggtttttgtttttgaagat
aCAAATTACCTTTGAATTGACTGTTTTGGACTAACGAGATCTGTAAGGGT
TTTGGTTTGACGAGATCTGTAAGGATTATAGTATCGCAGATCCATTGTCA
ACTTGTGCTGGTTATGACTGATAGCAAGATGGAAAAATAATGATAAGCTT
GGTTAGACTGAAAAGGTGCTGCTTTGAATTTGATCAGTCGTTTTGGTATA
GCTTCttccttttgtctttttttttaatttggtttCCTTCTAAAGCATag
atataattattttttcgatacagtatatatttttcgtctttatattttgt
tttttttcttacgAAACAAGATGTTTTGGATAGATTTAGAacgttttttg
aaatatttttttagcaaaaaagtatagattttttctttaatttttcaata
tttttttggaaCGTTTCTATAGTATAAtctattttcattatttatgCTGC
ATGCACCaggtttatatttttcttttagccggattttaataaagaaagct
tttttttcaaatgactgCTTTAGTCAGCCTACGATACCATACAAATAAGA
ATTTGTTGACTTGATTTATCCAAAATAAATTGGTTCAGCTTCTGCCTGGT
GCCACCCAAATTTTCCGAAATGAATCAAAACAATTGTTTGACGCCTTTGT
CCGGGATTATTTTTACCTCAGACTCAAAATATTACGTTAGGTTCATCTTA
CCAACTTTTtgttagaaaattaaaaaattatttaaattttgTCCTGTAAT
GTTatgtcaaaatgtttttttgcaatGAGTTTTTGAACTTAAATGAATTT
TATTAAGTGTAATTCACTACTTTCTAAAAGTACATGGAGAAAATGTTCGG
ATTCCAGAGCTTAATCAAATGCGATTGGTTAGTCTTAATATCCAAAAAGG
TCTTAAGTCTAACCTTATCTAAGCAATAGCTATACAAAGGAATACTGGTT
TTTTCTCAGCGGCTTGTATCTAAGAGAGAAAagcaaaaatgaggttttct
aCCACTCGTCATtattaattttacttttctttttgtcttttatgttaatt
ttttggtttttaattattttttttttaatgaaggTTGTTAATTTTAGGTT
AATAAAAACTTTAGATACTACTGTTGTGATGTTTTGCTGTACATAAAGTA
TTATGATAATTTGGAAGTTCATTTGTTACTTTGTTTCggttattttggaa
atttgttatGTTTTAATTATTGTAGTAATCTCCAGATTTTCTGGTTTGTA
TTTTTCTAGTTTACTATAATTTTACGAAAGTATTTTCAATTCGCACGAAG
TTATTATACCTTTACTTCAGAGCACTTCACTTGGTTATTTTACGCTTCGC
TTCAATTGTATAGAAAGGGACTAGCGTATAGGAGCTTACCACATTTAAAC
AAAAAACCGAATGTTTTGAGTCTGAGAACCAAGTCACCAAGTGAGCGTAT
TGAGCTTTATATAGGATGAAGGAGGATGAAGCCTAAAACCCGGATAAACC
ATAAGTCATCAAAACCTAgatattttcatttcataatGGACATCATCTTA
TATCTATCACCAAATTTTTGTTCATATATTTATTAGTACTGGTATATAAT
CATTATCACATGCATTTTTTGcgtattattttctttaattacttttattt
tggtttaactattatatttttttaaaaagtcaaagaatAAACTGGAGTTA
CATCACGAAAATTTTATAACCATAAAATGATAATTATTTAAGTATCTTTT
AACTGAATTTCGGTTATAGTCTTATTTTTCTAACAACTCTATGTACCAAG
TTGGCACATATACCGTTTTAACGCCTATCTAACAGACGTGGTCAGTGCAC
ACTATAGAATTAGCAATTCATTTGAACGTTATTGGC

Coding sequence (CDS) from alignment at sc0000377:110189..117324+

>TCONS_00021032 ID=TCONS_00021032|Name=TCONS_00021032|organism=Clytia hemisphaerica|type=CDS|length=6102bp|location=Sequence derived from alignment at sc0000377:110189..117324+ (Clytia hemisphaerica)
CAAAGAGTTCGTAACGCAAAGCAACTTGGTTTAAATTTGACCACGagtga
gaaattcaagaaacaTCAACGTCTTGATCCTGATATCAAACATCTTTTTA
AGGTGATGTTGATTGGTGACAGTGGTGTAGGGAAGACATGTGTTTTAATC
CGATTCAAAGATGGCGCATTTTTAAGTGGTAGTTTCATCTCGACTGTAGG
AATTGACTTTAGGAACAAAACCATAAACGTGGACGGGAAGAAAGTCAAGT
TACAAATTTGGGACACAGCCGGACAAGAGAGATTTCGAAGCATCACGCAT
GCATACTATAGAGATGCACATGctCTATTGCTGCTTTATGATGTGGGTAG
CAGAAAATCATTCGAAAACACGAGGGCGTGGTTATCAGAAATTAGAGAGT
ATGCACCAAATGACGCTGTCATTATGTTGCTCGGCAACAAGTGTGATTTG
GCAAAAGAAAGACAAGTCAAAAGGGAGGAAGGTGAAAAATTAGCGCAGGA
TTATAATGTACCATTCCTGGAAACAAGCGCAAAATCGGGGCTGAATGTTG
ATCTAGCGTTCGAAGCTGCTTCAAGaGAATTAATGAATATAGAAGCACGC
GGTAAAGAACACAATGGAAAATTTAATATTGGACAATATGTTTCAGAGAA
AGAACAAAAGCCTGGATGCTGTGGGTAACAAAGAGTTCGTAACGCAAAGC
AACTTGGTTTAAATTTGACCACGagtgagaaattcaagaaacaTCAACGT
CTTGATCCTGATATCAAACATCTTTTTAAGGTGATGTTGATTGGTGACAG
TGGTGTAGGGAAGACATGTGTTTTAATCCGATTCAAAGATGGCGCATTTT
TAAGTGGTAGTTTCATCTCGACTGTAGGAATTGACTTTAGGAACAAAACC
ATAAACGTGGACGGGAAGAAAGTCAAGTTACAAATTTGGGACACAGCCGG
ACAAGAGAGATTTCGAAGCATCACGCATGCATACTATAGAGATGCACATG
ctCTATTGCTGCTTTATGATGTGGGTAGCAGAAAATCATTCGAAAACACG
AGGGCGTGGTTATCAGAAATTAGAGAGTATGCACCAAATGACGCTGTCAT
TATGTTGCTCGGCAACAAGTGTGATTTGGCAAAAGAAAGACAAGTCAAAA
GGGAGGAAGGTGAAAAATTAGCGCAGGATTATAATGTACCATTCCTGGAA
ACAAGCGCAAAATCGGGGCTGAATGTTGATCTAGCGTTCGAAGCTGCTTC
AAGaGAATTAATGAATATAGAAGCACGCGGTAAAGAACACAATGGAAAAT
TTAATATTGGACAATATGTTTCAGAGAAAGAACAAAAGCCTGGATGCTGT
GGGTAACAAAGAGTTCGTAACGCAAAGCAACTTGGTTTAAATTTGACCAC
GagtgagaaattcaagaaacaTCAACGTCTTGATCCTGATATCAAACATC
TTTTTAAGGTGATGTTGATTGGTGACAGTGGTGTAGGGAAGACATGTGTT
TTAATCCGATTCAAAGATGGCGCATTTTTAAGTGGTAGTTTCATCTCGAC
TGTAGGAATTGACTTTAGGAACAAAACCATAAACGTGGACGGGAAGAAAG
TCAAGTTACAAATTTGGGACACAGCCGGACAAGAGAGATTTCGAAGCATC
ACGCATGCATACTATAGAGATGCACATGctCTATTGCTGCTTTATGATGT
GGGTAGCAGAAAATCATTCGAAAACACGAGGGCGTGGTTATCAGAAATTA
GAGAGTATGCACCAAATGACGCTGTCATTATGTTGCTCGGCAACAAGTGT
GATTTGGCAAAAGAAAGACAAGTCAAAAGGGAGGAAGGTGAAAAATTAGC
GCAGGATTATAATGTACCATTCCTGGAAACAAGCGCAAAATCGGGGCTGA
ATGTTGATCTAGCGTTCGAAGCTGCTTCAAGaGAATTAATGAATATAGAA
GCACGCGGTAAAGAACACAATGGAAAATTTAATATTGGACAATATGTTTC
AGAGAAAGAACAAAAGCCTGGATGCTGTGGGTAACAAAGAGTTCGTAACG
CAAAGCAACTTGGTTTAAATTTGACCACGagtgagaaattcaagaaacaT
CAACGTCTTGATCCTGATATCAAACATCTTTTTAAGGTGATGTTGATTGG
TGACAGTGGTGTAGGGAAGACATGTGTTTTAATCCGATTCAAAGATGGCG
CATTTTTAAGTGGTAGTTTCATCTCGACTGTAGGAATTGACTTTAGGAAC
AAAACCATAAACGTGGACGGGAAGAAAGTCAAGTTACAAATTTGGGACAC
AGCCGGACAAGAGAGATTTCGAAGCATCACGCATGCATACTATAGAGATG
CACATGctCTATTGCTGCTTTATGATGTGGGTAGCAGAAAATCATTCGAA
AACACGAGGGCGTGGTTATCAGAAATTAGAGAGTATGCACCAAATGACGC
TGTCATTATGTTGCTCGGCAACAAGTGTGATTTGGCAAAAGAAAGACAAG
TCAAAAGGGAGGAAGGTGAAAAATTAGCGCAGGATTATAATGTACCATTC
CTGGAAACAAGCGCAAAATCGGGGCTGAATGTTGATCTAGCGTTCGAAGC
TGCTTCAAGaGAATTAATGAATATAGAAGCACGCGGTAAAGAACACAATG
GAAAATTTAATATTGGACAATATGTTTCAGAGAAAGAACAAAAGCCTGGA
TGCTGTGGGTAACAAAGAGTTCGTAACGCAAAGCAACTTGGTTTAAATTT
GACCACGagtgagaaattcaagaaacaTCAACGTCTTGATCCTGATATCA
AACATCTTTTTAAGGTGATGTTGATTGGTGACAGTGGTGTAGGGAAGACA
TGTGTTTTAATCCGATTCAAAGATGGCGCATTTTTAAGTGGTAGTTTCAT
CTCGACTGTAGGAATTGACTTTAGGAACAAAACCATAAACGTGGACGGGA
AGAAAGTCAAGTTACAAATTTGGGACACAGCCGGACAAGAGAGATTTCGA
AGCATCACGCATGCATACTATAGAGATGCACATGctCTATTGCTGCTTTA
TGATGTGGGTAGCAGAAAATCATTCGAAAACACGAGGGCGTGGTTATCAG
AAATTAGAGAGTATGCACCAAATGACGCTGTCATTATGTTGCTCGGCAAC
AAGTGTGATTTGGCAAAAGAAAGACAAGTCAAAAGGGAGGAAGGTGAAAA
ATTAGCGCAGGATTATAATGTACCATTCCTGGAAACAAGCGCAAAATCGG
GGCTGAATGTTGATCTAGCGTTCGAAGCTGCTTCAAGaGAATTAATGAAT
ATAGAAGCACGCGGTAAAGAACACAATGGAAAATTTAATATTGGACAATA
TGTTTCAGAGAAAGAACAAAAGCCTGGATGCTGTGGGTAACAAAGAGTTC
GTAACGCAAAGCAACTTGGTTTAAATTTGACCACGagtgagaaattcaag
aaacaTCAACGTCTTGATCCTGATATCAAACATCTTTTTAAGGTGATGTT
GATTGGTGACAGTGGTGTAGGGAAGACATGTGTTTTAATCCGATTCAAAG
ATGGCGCATTTTTAAGTGGTAGTTTCATCTCGACTGTAGGAATTGACTTT
AGGAACAAAACCATAAACGTGGACGGGAAGAAAGTCAAGTTACAAATTTG
GGACACAGCCGGACAAGAGAGATTTCGAAGCATCACGCATGCATACTATA
GAGATGCACATGctCTATTGCTGCTTTATGATGTGGGTAGCAGAAAATCA
TTCGAAAACACGAGGGCGTGGTTATCAGAAATTAGAGAGTATGCACCAAA
TGACGCTGTCATTATGTTGCTCGGCAACAAGTGTGATTTGGCAAAAGAAA
GACAAGTCAAAAGGGAGGAAGGTGAAAAATTAGCGCAGGATTATAATGTA
CCATTCCTGGAAACAAGCGCAAAATCGGGGCTGAATGTTGATCTAGCGTT
CGAAGCTGCTTCAAGaGAATTAATGAATATAGAAGCACGCGGTAAAGAAC
ACAATGGAAAATTTAATATTGGACAATATGTTTCAGAGAAAGAACAAAAG
CCTGGATGCTGTGGGTAACAAAGAGTTCGTAACGCAAAGCAACTTGGTTT
AAATTTGACCACGagtgagaaattcaagaaacaTCAACGTCTTGATCCTG
ATATCAAACATCTTTTTAAGGTGATGTTGATTGGTGACAGTGGTGTAGGG
AAGACATGTGTTTTAATCCGATTCAAAGATGGCGCATTTTTAAGTGGTAG
TTTCATCTCGACTGTAGGAATTGACTTTAGGAACAAAACCATAAACGTGG
ACGGGAAGAAAGTCAAGTTACAAATTTGGGACACAGCCGGACAAGAGAGA
TTTCGAAGCATCACGCATGCATACTATAGAGATGCACATGctCTATTGCT
GCTTTATGATGTGGGTAGCAGAAAATCATTCGAAAACACGAGGGCGTGGT
TATCAGAAATTAGAGAGTATGCACCAAATGACGCTGTCATTATGTTGCTC
GGCAACAAGTGTGATTTGGCAAAAGAAAGACAAGTCAAAAGGGAGGAAGG
TGAAAAATTAGCGCAGGATTATAATGTACCATTCCTGGAAACAAGCGCAA
AATCGGGGCTGAATGTTGATCTAGCGTTCGAAGCTGCTTCAAGaGAATTA
ATGAATATAGAAGCACGCGGTAAAGAACACAATGGAAAATTTAATATTGG
ACAATATGTTTCAGAGAAAGAACAAAAGCCTGGATGCTGTGGGTAACAAA
GAGTTCGTAACGCAAAGCAACTTGGTTTAAATTTGACCACGagtgagaaa
ttcaagaaacaTCAACGTCTTGATCCTGATATCAAACATCTTTTTAAGGT
GATGTTGATTGGTGACAGTGGTGTAGGGAAGACATGTGTTTTAATCCGAT
TCAAAGATGGCGCATTTTTAAGTGGTAGTTTCATCTCGACTGTAGGAATT
GACTTTAGGAACAAAACCATAAACGTGGACGGGAAGAAAGTCAAGTTACA
AATTTGGGACACAGCCGGACAAGAGAGATTTCGAAGCATCACGCATGCAT
ACTATAGAGATGCACATGctCTATTGCTGCTTTATGATGTGGGTAGCAGA
AAATCATTCGAAAACACGAGGGCGTGGTTATCAGAAATTAGAGAGTATGC
ACCAAATGACGCTGTCATTATGTTGCTCGGCAACAAGTGTGATTTGGCAA
AAGAAAGACAAGTCAAAAGGGAGGAAGGTGAAAAATTAGCGCAGGATTAT
AATGTACCATTCCTGGAAACAAGCGCAAAATCGGGGCTGAATGTTGATCT
AGCGTTCGAAGCTGCTTCAAGaGAATTAATGAATATAGAAGCACGCGGTA
AAGAACACAATGGAAAATTTAATATTGGACAATATGTTTCAGAGAAAGAA
CAAAAGCCTGGATGCTGTGGGTAACAAAGAGTTCGTAACGCAAAGCAACT
TGGTTTAAATTTGACCACGagtgagaaattcaagaaacaTCAACGTCTTG
ATCCTGATATCAAACATCTTTTTAAGGTGATGTTGATTGGTGACAGTGGT
GTAGGGAAGACATGTGTTTTAATCCGATTCAAAGATGGCGCATTTTTAAG
TGGTAGTTTCATCTCGACTGTAGGAATTGACTTTAGGAACAAAACCATAA
ACGTGGACGGGAAGAAAGTCAAGTTACAAATTTGGGACACAGCCGGACAA
GAGAGATTTCGAAGCATCACGCATGCATACTATAGAGATGCACATGctCT
ATTGCTGCTTTATGATGTGGGTAGCAGAAAATCATTCGAAAACACGAGGG
CGTGGTTATCAGAAATTAGAGAGTATGCACCAAATGACGCTGTCATTATG
TTGCTCGGCAACAAGTGTGATTTGGCAAAAGAAAGACAAGTCAAAAGGGA
GGAAGGTGAAAAATTAGCGCAGGATTATAATGTACCATTCCTGGAAACAA
GCGCAAAATCGGGGCTGAATGTTGATCTAGCGTTCGAAGCTGCTTCAAGa
GAATTAATGAATATAGAAGCACGCGGTAAAGAACACAATGGAAAATTTAA
TATTGGACAATATGTTTCAGAGAAAGAACAAAAGCCTGGATGCTGTGGGT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011802XLOC_011802Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021032-proteinTCONS_00021032-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021032-exon-sc0000377-1491911889:110189..110290TCONS_00021032-exon-sc0000377-1491911889:110189..110290Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:110189..110290TCONS_00021032-exon-sc0000377-1510915933:110189..110290Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:110189..110290TCONS_00021032-exon-sc0000377-1575043694:110189..110290Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:112698..112808TCONS_00021032-exon-sc0000377-1491911889:112698..112808Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:112698..112808TCONS_00021032-exon-sc0000377-1510915933:112698..112808Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:112698..112808TCONS_00021032-exon-sc0000377-1575043694:112698..112808Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:113034..113075TCONS_00021032-exon-sc0000377-1491911889:113034..113075Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:113034..113075TCONS_00021032-exon-sc0000377-1510915933:113034..113075Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:113034..113075TCONS_00021032-exon-sc0000377-1575043694:113034..113075Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:113440..113506TCONS_00021032-exon-sc0000377-1491911889:113440..113506Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:113440..113506TCONS_00021032-exon-sc0000377-1510915933:113440..113506Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:113440..113506TCONS_00021032-exon-sc0000377-1575043694:113440..113506Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:113664..113716TCONS_00021032-exon-sc0000377-1491911889:113664..113716Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:113664..113716TCONS_00021032-exon-sc0000377-1510915933:113664..113716Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:113664..113716TCONS_00021032-exon-sc0000377-1575043694:113664..113716Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:114118..114183TCONS_00021032-exon-sc0000377-1491911889:114118..114183Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:114118..114183TCONS_00021032-exon-sc0000377-1510915933:114118..114183Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:114118..114183TCONS_00021032-exon-sc0000377-1575043694:114118..114183Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:114402..114458TCONS_00021032-exon-sc0000377-1491911889:114402..114458Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:114402..114458TCONS_00021032-exon-sc0000377-1510915933:114402..114458Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:114402..114458TCONS_00021032-exon-sc0000377-1575043694:114402..114458Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:114704..114780TCONS_00021032-exon-sc0000377-1491911889:114704..114780Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:114704..114780TCONS_00021032-exon-sc0000377-1510915933:114704..114780Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:114704..114780TCONS_00021032-exon-sc0000377-1575043694:114704..114780Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1491911889:115117..117324TCONS_00021032-exon-sc0000377-1491911889:115117..117324Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1510915933:115117..117324TCONS_00021032-exon-sc0000377-1510915933:115117..117324Clytia hemisphaericaexon
TCONS_00021032-exon-sc0000377-1575043694:115117..117324TCONS_00021032-exon-sc0000377-1575043694:115117..117324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:110189..117324 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.379918	0.48407	0.412913	0.312146	1.65109e-07	0	0	0	4.40212	3.62725	1.64246	2.07837	0.60679	0.802682	0.794443	0.820784	2.91945	2.59333	2.38465	1.69015	2.1242	2.74039	1.02471	1.60119	0	0	0.531383	1.48051	0.658985	0.609794
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Blast
[Close]
BLAST of TCONS_00021032 vs. Swiss-Prot (Human)
Match: RAB26 (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 8.463e-84
Identity = 127/192 (66.15%), Postives = 156/192 (81.25%), Query Frame = 1 
Query:   97 FKVMLIGDSGVGKTCVLIRFKDGAFLSGSFISTVGIDFRNKTINVDGKKVKLQIWDTAGQERFRSITHAYYRDAHALLLLYDVGSRKSFENTRAWLSEIREYAPNDAVIMLLGNKCDLAKERQVKREEGEKLAQDYNVPFLETSAKSGLNVDLAFEAASRELMNIEARGKEHNGKFNIGQYVSEKEQKPGCC 672
            FKVML+GDSGVGKTC+L+RFKDGAFL+G+FISTVGIDFRNK ++VDG KVKLQ+WDTAGQERFRS+THAYYRDAHALLLLYDV ++ SF+N +AWL+EI EYA +D  +MLLGNK D A ER VKRE+GEKLA++Y +PF+ETSAK+GLNVDLAF A ++EL     +      +F +  YV  + +   CC
Sbjct:   64 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKAPSEP-RFRLHDYVKREGRGASCC 254
The following BLAST results are available for this feature:
BLAST of TCONS_00021032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB268.463e-8466.15Ras-related protein Rab-26 OS=Homo sapiens GN=RAB2... [more]
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