TCONS_00021001 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021001
Unique NameTCONS_00021001
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6648

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021001 ID=TCONS_00021001|Name=TCONS_00021001|organism=Clytia hemisphaerica|type=transcript|length=6648bp
TTagacaataaaaaatgaaaaaatgaatgatTGAAACTTCTGACCCTTCT
TACAATCTTATCAAATAAAACGGTTGTTATCGAGCCAAGCTTGATATCAC
CACCATGTCAGAGATTGTTGATTGTATAGCATGGATCGTTCGTAAGACAT
TCTGGTCTTTTGGGGTACTACTAAAATTCCTTGGACTACgattacttgat
ttacttgGATTGATCTTCAACCTGTTAGCATGTTGTACAATAGTACGGCT
ACCACACATGATCGCCGGTTTCCAAGAAATGTCCATGTGGGGCTGGCGAT
GGATCGGCTTTGTtcaattcttcattttcttgaTCGATATACCAATCTTC
ATAATGGGGTTATTCATCTTGTTTACTTTATGGCGTGTACCTCAAACTTA
TAAAGAACTGAAGGAAGAGCTTCATTTAAAAGACTGGAGCGTTAATGACA
GTGGATTTAAATACTATGGATGGAAAATTCGACAAATTGTTATTACCAAT
TTCTTCAAATCATGCATTGATATTTTCTGTTTTCCACTGGCTTTGATATT
GTTATTGTCATGGAGATGTGTTTTATTCATCAATGAGATGAAGAAAGCAG
AATCGGATTCGGATCGTCGTAAAACTTGTTTCAAACATTTCTTCCAGTTG
TTGTTAGACATACCACTTTTGATTGTTACCATTCCAGCAATCCTCTCCTG
GAGACTACCGATTTACGTTTATCAAGTGAGAAAAGCCATCAAGAACAACG
ATGAATGGGACGAAATTCGACTCCTTGGAATTAtccaatgtttttattta
ttcttgGATATACCATGTCTCGTTATGTTCTTCATCACTTTAGTCACGTG
GCGTTCCCCCATCATGTTATGGCAGCTCAGCAACCCTGATCGAGCTTTCT
ATCGCAAGAAACAACAGATGATTATAAGGAAAATTGTCACATTACAATTT
CTGTACTTGTTTTTAGACATTCCTTGTATTATTTGCTCCATATTGATCCT
TGGTACTCTGTGGAGATTACCAACTTTTATCCGGAGATGTAAAAAGCAAT
TTGATATCGTTCGTAATAAGACTGCTTTCTATAAGAAAGAAATGCACCTT
CGTATTGTctgttttcaagaattttgtaTGGTTTTCGTCGATTTTTTCTG
CTTCATACTTTTCGTGATCGTATTCTTCACGTTATGGCGTACTTACCCCA
TCATCAAAGACGTTAAAGGTTATTTGAAACGATACAGCCAAGataagaaa
gtgaaagtgatagTCCCATCAGAAAACACTCCAATTTCAACATCTACAGT
CGAAACGAACAACTCTGAAGAGAAACCTATTTCTTCTGAAAACGAAAAGG
AGGGAGAAGAGGAAGCTGAGAAAAAACCACCCTTGACTTGGTCCAAATGC
ATGACCAAAATCCGAAAAACAATCTGTATGCACTTCGCTTTATTAATCAT
CGATCTACCAGCTATACCGATTTGTTTGTTTCTCTTGATTACCGTTTTAC
GGACAACCCGATTGTTATCCGATTTGCTTGGCGGGAAATTCTACATGTTG
TTTGCAGTATCGGTGTATTACCACGCGTTACATTTCTTGAttgatgtttt
ctttatttgtttgttCTTGGTGTTAATGGTGTTACGACCTATTCAAGTCT
GGATTAACATTCTAGAGGACgaggaacatcaaaaacatagGGAACTGAAA
GAAATTATGAAGTGGTTTCCAGACATCGCCAATAGTCGACATGAAGTTTA
CCAACGATTAGATGACGTTTTAAGTTTAAGTTttaagaatgttgaaaaag
aatttcaatgttTGAGTAAGTTGAATAATGAAATGGATGACCTTATTGAT
CGTGTAAATACCATTCTTGATAAGCTCTCTAAACATGAAATTGAAGACGA
ATTTGTGACTCTCGTAAAGACTGTTATCTTTTACGAAAAGCAACGTACAC
AAAAGTTGGTGCGTTTGTACACAGCGGAACATCACTTCTTACGTCGACCA
GATACAAAGATTCGTGCACAAAACCTCGCTCTTCTACAACGCGAGAAATT
TGAATATGACCGCAACCTAGGTGGAGTTTAtgagaaattaaaaaattaca
ctCCACCTCATGTCCCTTTATACGAATCCAAAACTGGTTTCTCTCTTCGA
TCACGTGACGagacaaaaaaagttttaatcaaAACATTACCACGTGGTGG
GCTGCCCGTTATTTTTGGcgttttaatttgttgtttgCCACTTTACCGTG
CGCCGAAGTTGATCTATCGATTAGTTCGTCGTTGGTATGCACGTTTTGAT
ATTTTACGAGAAACTCTTTATGAATATGCGTTAGATTTCCTGACCATTCT
ACGCATCATTTTCGTTGTTTTGTTCCTGTATCGGGCGCCGTTTATGCTGG
CTGATATCTTCGATTGCATCGTCGAAAAACGTAGCTGGGTTGCTGTTCGG
AAAGTTGTTAAAGAGTACCCTGGTTTTATAGCAGAGGACATTTATTTGTT
GATTAAGGCGTTACTGTCATGGAAAACGCCCCGTTTTCTTCTTACCGCCC
TACTTTTCGGATTTTTCATGCCGGCCGACCTATTTTTGACCGTTGGAAAA
GTTTGCACAGGCAGTAAGTGTATCGCATATTTAATCACTTTATTCTTGTA
CCTGATATTCATGGGTTTCCCATTCGCGTACTCGTTTTACGGTGCCGAGA
AAATAATCGAATACGGACTAGCTTCGACAAATATGATCTTCATCAGCGTT
TTCATTGGTATTTTGTTATTCGTTCTTTTAACAATGGTTATCAGTCTAAT
TCGTGATCAAAAGAAGGTATTCTTGTTGAAAATGCCGGATGCCGATTACG
TTCGATTTAACTGGTACAACATGCACGTGTTAGTGTTCGAAGGTTTAGAA
TTCTTCCAATCGATTGCATTGATTTTCAAATTAACAGACATCCCAATGTA
TGGCTCAAACCATTTATCAGAAgcttcgaaaatccttttattCTCATTTT
TACCGTTTGAACCGATCTTTTGGATAACCGTctctgtttttgtattttgg
ttCTTAAGCTGTGGTGCGCCAATCATTTTCGAGAACATNTATTTATCAGA
AGCTTCGAAAATTCTTTTATTCTCATTTTTACCGTTTGAACCGATCTTTT
GGATAACCGTctctgtttttgtattttggttCTTAAGCTGTGGTGCGCCA
ATCATTTTCGAGAACATTCTTGAAGATTTCCCTATAGGAACATTCGGTAA
ACGACCAAGTTGGAGATTAACCATATCGCTTCTTGCCAAcacattatttt
tatttttcgtcgAGAACTTTATATCATTTAGTGCGTGTAATTATGAACAT
TGCGCATCAAATTTCACCCTCGGTAATATCCAATCTAACGCCACTTGTCT
ACAATCAACCTTCGTCGAGGATACCTCCATGCAATGCTGGTCCGAACCCC
ACCGAGATTATGCTGCTTTCGGACTCTTTGGTCTGGTATGGTACACCACC
ACCGCTTTGATCTTTGATACCACCTACGGGGATCCAGACACAGTCGATCA
GGATATAGGCTTCTCCCCTATCTACACTACTGTCATCAACATCCTGAAGG
CGGGTATGGTTGTCTCCGCCACCATAATCACCAAAACGCCCTACGTCACT
CTGATCTGTTTACTTGTCTTTAACATACTATCCATCTTGTTTACATTTGG
CTTCAAAATGATGTTCAAATTCTACCCATGTAATTTTATCAGTGTTCTTG
TCTGGAGATTGTGTACTTTTGTATCGAGTTGTGTGGTTGTTGTTGCCGTC
CTGGTAGCATTTGTGATGGATGATCCATCTTCTAAGACACCTCTCATCAT
CATGTGTGTCGGTGTCGTAGTCGTATTCATCGTCTCTCTCATCGTCGCAA
TCAAACAACGTCAAATCAGTAACGTCGAACGAGACCGCGAACTTTTTCGT
AAAGAAATCATGAACTTAGAGAACAGAATACAAAAGAACAAATGGTTTTT
GAAAGGATGGGAGAAAAGATCGTCAACGTGGAACCGTCTAATCAAATCCG
TACGATCTGCACAAAAACTTGACAAATCGCTATCTCCCAAAACCGATCTA
GTAGCAACTCCATCAATTCAATCTAAATACCAATCCTTTCAAGCTCCACC
ACCTTTTGTACCTCCTTCAACTTCAGACGATTCCATCGAGTTGAATAACT
TCGAAAAAGAAGGTGACAAGATCTCATTGCACTCTAGCTCGTCTATCGAG
GAGCAGAATACCGACCAACCAGCACCAGCAACTGATCCTCAAGCTGCAGA
ACCATCAGGCCCTCCAGATATCAAGATCACCTTCGACCCTCCTTCAGCAG
AAATCAAACCTCCACCACTACAGATAGACCACAACCCAGAAGCTGCCACC
AACAGCCAGTTAACACCACCCTTACCACCTACCGATCTCGGGCTACCACC
ACCACCTTCATACGAAGCAGTACAGAATAACAAAACATACTACGATTTAC
ACGAATTCCAATCGGACAGAGATGAATACCTCCGTCTAGAAAAGAACGGT
AGAAACCTTTTAGTAACACTTGAAAAATACGTCGACTATAAAGCGTACAA
ATACTCGTTTTTCCTTCAACGTGATCTATGGTTAAACTCAGCTTGGAATG
CAAATTGGACCAGCCTTTTACAGTGTTTACGTGTCTTGAACTCTAACCTT
ACGGGTGattttgaccgcccgtccgccctCGATCTACAGCTTGCCCAGCC
GTCCATAGATAAAGACATCTTACCAAAAGATCCTCAAGATTCGAACGAAC
CACCGCCTCCATTTGTTAAGGAAACCAAGGAAATGCGTCTTCAAAGATCT
AACGAATGTCGAAAGAAAGCGTTAGCTGATGTAGCGTCGCATACACCGTA
TACAGAGGAGTGGGTTGCTATTTTCGAGCGCATCTTACCAACAAATGGAT
GCATCAAGTCGTGGAATATTCAGGGAGACGCCACCGATCATCTGATATTC
TCATTAGAGCTAAGACGATCAGCCACGGGAAAAATAGTCGGCATCGATGA
AAACGCCAGTGGAAATAAACTCGCCATTGGTGCATCGTTGATTCTCGGTA
AAAAGTTGTCGGGAAATATATCTTCGGGTTCGTTGACACTCAACGAAGGA
ATTGTCGGCAAAAAAGGACCTGTTTCACTCACCATAAAATCGTTGAGCTT
CatgcaaaagaaaaataaaacttataTTCAAGTTTCAGATAAGAAGGCAG
CATTTGCTATGGTTCTGGCGTCTAGTAAAGAAATTGTTTGGGAATGATTA
TAATTTTGTAATTGCTAATTTATATGTTAATTTTTTAATACCTATCCAAT
CATATTGGAAGCCTTTGGAATCATTTAATGAGTATTATtagatttttcga
aaataacgTCTTTATCACTTTAACTCAAAACCAGCGTAGATTGAAATTCT
TGCgtcaaacaaacaaaacatttttattaagtAGATTTAATAGTCATTCA
CCTAAGAAAGCACCGATTCGAATAATCTCCAAAATTAGCATTCGTTTATT
GTGTTGGATTAAAACCGACTTTGACTtactatttataagaatcagctatt
ccagaaaaagattAAACCCCGACTTCCGATATTTTAAAGACCATCCTGGA
TTTTCTAGACACTTTGgattttttgtcgaattttacAGAGACTccctgaa
ttaaaaaaaatctaattgacTCTCCTGGATTTTTCTAGGTTTTTCTAGCG
CAGTGCGtatctttttttggaaaagtgcattattattaaaatttcttcac
tgtAAATATGATTCtaaatttctttcaataaacATTTTAAATTAAACGTA
TTAGAATTATTTATTAACTATAAAATTATTGCACAAAAAATTTATGTTAC
TGTATATCATTAGATAAGGATTAATATTTTAATAAGCTGATTCGCACTGT
ATTGGACAGAGTCCCATAGTCTAAAGATCAAAGAAACTTACGTAATccaa
tttttgttataaacaaaTTTCAGCTGTCAAATATGTTTGTTTGCAAATCT
TTCAAACTCTAAATTCGATTTCATATTGATATTTTCAAGGAACTTTAATA
TTATGAATTCtgctttttttatatttgagcaCTACTTTTTCTagcatatt
tttttaattctttctactttttgacttatattttttctgaaggatttcca
aaagcaaaagccgatatttttaattttccacaCTCTAGTGGGAACCGACA
ATATTTGTGTTTAAGGAGGGATCTCTGTGATATTAGTGAAGCTGAGTTTC
TAATTTCGTTTTCCAATTTCGTTTTCCAATTTATTTAAGATAATATAATT
ATTATAATGACAACCGATAAGATATTTGAACTCGTTTTCCAATTGATATT
TCAAACATTATACACGGTTTGGCTTCAACCAAATCTTCCTCTTCTCAtcc
ttttataaaataaaatattagaCAGTAATATAATTATTCTAGAATATCTA
AGTATGCTAAAAAGCTTCGAATATAAATTTATATCAAACTCGTATCCAGA
ACCACATGCACCACTTTTGATCTTACTAACTACAATCGAGAGCGCTATCA
GAACCATAAAACAACGAACTAAGGGACTGGATTCGAGTTTTATTTTAT
Run BLAST on NCBI

protein sequence of TCONS_00021001-protein

>TCONS_00021001-protein ID=TCONS_00021001-protein|Name=TCONS_00021001-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1730bp
MSEIVDCIAWIVRKTFWSFGVLLKFLGLRLLDLLGLIFNLLACCTIVRLP
HMIAGFQEMSMWGWRWIGFVQFFIFLIDIPIFIMGLFILFTLWRVPQTYK
ELKEELHLKDWSVNDSGFKYYGWKIRQIVITNFFKSCIDIFCFPLALILL
LSWRCVLFINEMKKAESDSDRRKTCFKHFFQLLLDIPLLIVTIPAILSWR
LPIYVYQVRKAIKNNDEWDEIRLLGIIQCFYLFLDIPCLVMFFITLVTWR
SPIMLWQLSNPDRAFYRKKQQMIIRKIVTLQFLYLFLDIPCIICSILILG
TLWRLPTFIRRCKKQFDIVRNKTAFYKKEMHLRIVCFQEFCMVFVDFFCF
ILFVIVFFTLWRTYPIIKDVKGYLKRYSQDKKVKVIVPSENTPISTSTVE
TNNSEEKPISSENEKEGEEEAEKKPPLTWSKCMTKIRKTICMHFALLIID
LPAIPICLFLLITVLRTTRLLSDLLGGKFYMLFAVSVYYHALHFLIDVFF
ICLFLVLMVLRPIQVWINILEDEEHQKHRELKEIMKWFPDIANSRHEVYQ
RLDDVLSLSFKNVEKEFQCLSKLNNEMDDLIDRVNTILDKLSKHEIEDEF
VTLVKTVIFYEKQRTQKLVRLYTAEHHFLRRPDTKIRAQNLALLQREKFE
YDRNLGGVYEKLKNYTPPHVPLYESKTGFSLRSRDETKKVLIKTLPRGGL
PVIFGVLICCLPLYRAPKLIYRLVRRWYARFDILRETLYEYALDFLTILR
IIFVVLFLYRAPFMLADIFDCIVEKRSWVAVRKVVKEYPGFIAEDIYLLI
KALLSWKTPRFLLTALLFGFFMPADLFLTVGKVCTGSKCIAYLITLFLYL
IFMGFPFAYSFYGAEKIIEYGLASTNMIFISVFIGILLFVLLTMVISLIR
DQKKVFLLKMPDADYVRFNWYNMHVLVFEGLEFFQSIALIFKLTDIPMYG
SNHLSEASKILLFSFLPFEPIFWITVSVFVFWFLSCGAPIIFENXYLSEA
SKILLFSFLPFEPIFWITVSVFVFWFLSCGAPIIFENILEDFPIGTFGKR
PSWRLTISLLANTLFLFFVENFISFSACNYEHCASNFTLGNIQSNATCLQ
STFVEDTSMQCWSEPHRDYAAFGLFGLVWYTTTALIFDTTYGDPDTVDQD
IGFSPIYTTVINILKAGMVVSATIITKTPYVTLICLLVFNILSILFTFGF
KMMFKFYPCNFISVLVWRLCTFVSSCVVVVAVLVAFVMDDPSSKTPLIIM
CVGVVVVFIVSLIVAIKQRQISNVERDRELFRKEIMNLENRIQKNKWFLK
GWEKRSSTWNRLIKSVRSAQKLDKSLSPKTDLVATPSIQSKYQSFQAPPP
FVPPSTSDDSIELNNFEKEGDKISLHSSSSIEEQNTDQPAPATDPQAAEP
SGPPDIKITFDPPSAEIKPPPLQIDHNPEAATNSQLTPPLPPTDLGLPPP
PSYEAVQNNKTYYDLHEFQSDRDEYLRLEKNGRNLLVTLEKYVDYKAYKY
SFFLQRDLWLNSAWNANWTSLLQCLRVLNSNLTGDFDRPSALDLQLAQPS
IDKDILPKDPQDSNEPPPPFVKETKEMRLQRSNECRKKALADVASHTPYT
EEWVAIFERILPTNGCIKSWNIQGDATDHLIFSLELRRSATGKIVGIDEN
ASGNKLAIGASLILGKKLSGNISSGSLTLNEGIVGKKGPVSLTIKSLSFM
QKKNKTYIQVSDKKAAFAMVLASSKEIVWE
Run BLAST on NCBI

transcript from alignment at sc0000376:90086..97268-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021001 ID=TCONS_00021001|Name=TCONS_00021001|organism=Clytia hemisphaerica|type=transcript|length=7183bp|location=Sequence derived from alignment at sc0000376:90086..97268- (Clytia hemisphaerica)
TTAGACAATAAAAAATGAAAAAATGAATGATTGAAACTTCTGACCCTTCT TACAATCTTATCAAATAAAACGGTTGTTATCGAGCCAAGGTAATTTCATT ATTTACTTTTCATTTTTTACGTCATTGTTTTTACATTTCTACGTTACCAT TATATTTTGGAGGCTTTGAAGGTTTGACTAACTTAAAATACGTCATTTAA ACGTTTTGCGTACACAATTTTTATCCCCTCTCACGCTATTTGAGCACAAT TTTTTAGAACTTTTTTTAGAAATCTGTTCTTAAATATATAAATATATTTC ATTCAATTTATTTTTTATTTTTTATCTAAATCAGAGTGGAAATTTTTCGA AGTTTTAATAAACGGGTGGGACCTAATTGCTGGGGGGTTGGAGATTGTAC TTCTAATAACCCAAAAACGAGGTAAATATAGGCTAAAATCAGGCTTTTTT GAGCAAAATAAGGCGACTTCTTCTTGCTAACTGAAAATATTCTTAAAAAT TAATAAATGGGGGGTCCTAATAAGGTCCAGGGGGATGGAAAATTTTCGAA AAATTAACAAGTGGGGGGGGGGGGGGTTTTTTTGGCCCCTAAGGGTAAAT TTGCTCATTTCTTATTCGTTTTAGCTTGATATCACCACCATGTCAGAGAT TGTTGATTGTATAGCATGGATCGTTCGTAAGACATTCTGGTCTTTTGGGG TACTACTAAAATTCCTTGGACTACGATTACTTGATTTACTTGGATTGATC TTCAACCTGTTAGCATGTTGTACAATAGTACGGCTACCACACATGATCGC CGGTTTCCAAGAAATGTCCATGTGGGGCTGGCGATGGATCGGCTTTGTTC AATTCTTCATTTTCTTGATCGATATACCAATCTTCATAATGGGGTTATTC ATCTTGTTTACTTTATGGCGTGTACCTCAAACTTATAAAGAACTGAAGGA AGAGCTTCATTTAAAAGACTGGAGCGTTAATGACAGTGGATTTAAATACT ATGGATGGAAAATTCGACAAATTGTTATTACCAATTTCTTCAAATCATGC ATTGATATTTTCTGTTTTCCACTGGCTTTGATATTGTTATTGTCATGGAG ATGTGTTTTATTCATCAATGAGATGAAGAAAGCAGAATCGGATTCGGATC GTCGTAAAACTTGTTTCAAACATTTCTTCCAGTTGTTGTTAGACATACCA CTTTTGATTGTTACCATTCCAGCAATCCTCTCCTGGAGACTACCGATTTA CGTTTATCAAGTGAGAAAAGCCATCAAGAACAACGATGAATGGGACGAAA TTCGACTCCTTGGAATTATCCAATGTTTTTATTTATTCTTGGATATACCA TGTCTCGTTATGTTCTTCATCACTTTAGTCACGTGGCGTTCCCCCATCAT GTTATGGCAGCTCAGCAACCCTGATCGAGCTTTCTATCGCAAGAAACAAC AGATGATTATAAGGAAAATTGTCACATTACAATTTCTGTACTTGTTTTTA GACATTCCTTGTATTATTTGCTCCATATTGATCCTTGGTACTCTGTGGAG ATTACCAACTTTTATCCGGAGATGTAAAAAGCAATTTGATATCGTTCGTA ATAAGACTGCTTTCTATAAGAAAGAAATGCACCTTCGTATTGTCTGTTTT CAAGAATTTTGTATGGTTTTCGTCGATTTTTTCTGCTTCATACTTTTCGT GATCGTATTCTTCACGTTATGGCGTACTTACCCCATCATCAAAGACGTTA AAGGTTATTTGAAACGATACAGCCAAGATAAGAAAGTGAAAGTGATAGTC CCATCAGAAAACACTCCAATTTCAACATCTACAGTCGAAACGAACAACTC TGAAGAGAAACCTATTTCTTCTGAAAACGAAAAGGAGGGAGAAGAGGAAG CTGAGAAAAAACCACCCTTGACTTGGTCCAAATGCATGACCAAAATCCGA AAAACAATCTGTATGCACTTCGCTTTATTAATCATCGATCTACCAGCTAT ACCGATTTGTTTGTTTCTCTTGATTACCGTTTTACGGACAACCCGATTGT TATCCGATTTGCTTGGCGGGAAATTCTACATGTTGTTTGCAGTATCGGTG TATTACCACGCGTTACATTTCTTGATTGATGTTTTCTTTATTTGTTTGTT CTTGGTGTTAATGGTGTTACGACCTATTCAAGTCTGGATTAACATTCTAG AGGACGAGGAACATCAAAAACATAGGGAACTGAAAGAAATTATGAAGTGG TTTCCAGACATCGCCAATAGTCGACATGAAGTTTACCAACGATTAGATGA CGTTTTAAGTTTAAGTTTTAAGAATGTTGAAAAAGAATTTCAATGTTTGA GTAAGTTGAATAATGAAATGGATGACCTTATTGATCGTGTAAATACCATT CTTGATAAGCTCTCTAAACATGAAATTGAAGACGAATTTGTGACTCTCGT AAAGACTGTTATCTTTTACGAAAAGCAACGTACACAAAAGTTGGTGCGTT TGTACACAGCGGAACATCACTTCTTACGTCGACCAGATACAAAGATTCGT GCACAAAACCTCGCTCTTCTACAACGCGAGAAATTTGAATATGACCGCAA CCTAGGTGGAGTTTATGAGAAATTAAAAAATTACACTCCACCTCATGTCC CTTTATACGAATCCAAAACTGGTTTCTCTCTTCGATCACGTGACGAGACA AAAAAAGTTTTAATCAAAACATTACCACGTGGTGGGCTGCCCGTTATTTT TGGCGTTTTAATTTGTTGTTTGCCACTTTACCGTGCGCCGAAGTTGATCT ATCGATTAGTTCGTCGTTGGTATGCACGTTTTGATATTTTACGAGAAACT CTTTATGAATATGCGTTAGATTTCCTGACCATTCTACGCATCATTTTCGT TGTTTTGTTCCTGTATCGGGCGCCGTTTATGCTGGCTGATATCTTCGATT GCATCGTCGAAAAACGTAGCTGGGTTGCTGTTCGGAAAGTTGTTAAAGAG TACCCTGGTTTTATAGCAGAGGACATTTATTTGTTGATTAAGGCGTTACT GTCATGGAAAACGCCCCGTTTTCTTCTTACCGCCCTACTTTTCGGATTTT TCATGCCGGCCGACCTATTTTTGACCGTTGGAAAAGTTTGCACAGGCAGT AAGTGTATCGCATATTTAATCACTTTATTCTTGTACCTGATATTCATGGG TTTCCCATTCGCGTACTCGTTTTACGGTGCCGAGAAAATAATCGAATACG GACTAGCTTCGACAAATATGATCTTCATCAGCGTTTTCATTGGTATTTTG TTATTCGTTCTTTTAACAATGGTTATCAGTCTAATTCGTGATCAAAAGAA GGTATTCTTGTTGAAAATGCCGGATGCCGATTACGTTCGATTTAACTGGT ACAACATGCACGTGTTAGTGTTCGAAGGTTTAGAATTCTTCCAATCGATT GCATTGATTTTCAAATTAACAGACATCCCAATGTATGGCTCAAACCATTT ATCAGAAGCTTCGAAAATCCTTTTATTCTCATTTTTACCGTTTGAACCGA TCTTTTGGATAACCGTCTCTGTTTTTGTATTTTGGTTCTTAAGCTGTGGT GCGCCAATCATTTTCGAGAACATNTATTTATCAGAAGCTTCGAAAATTCT TTTATTCTCATTTTTACCGTTTGAACCGATCTTTTGGATAACCGTCTCTG TTTTTGTATTTTGGTTCTTAAGCTGTGGTGCGCCAATCATTTTCGAGAAC ATTCTTGAAGATTTCCCTATAGGAACATTCGGTAAACGACCAAGTTGGAG ATTAACCATATCGCTTCTTGCCAACACATTATTTTTATTTTTCGTCGAGA ACTTTATATCATTTAGTGCGTGTAATTATGAACATTGCGCATCAAATTTC ACCCTCGGTAATATCCAATCTAACGCCACTTGTCTACAATCAACCTTCGT CGAGGATACCTCCATGCAATGCTGGTCCGAACCCCACCGAGATTATGCTG CTTTCGGACTCTTTGGTCTGGTATGGTACACCACCACCGCTTTGATCTTT GATACCACCTACGGGGATCCAGACACAGTCGATCAGGATATAGGCTTCTC CCCTATCTACACTACTGTCATCAACATCCTGAAGGCGGGTATGGTTGTCT CCGCCACCATAATCACCAAAACGCCCTACGTCACTCTGATCTGTTTACTT GTCTTTAACATACTATCCATCTTGTTTACATTTGGCTTCAAAATGATGTT CAAATTCTACCCATGTAATTTTATCAGTGTTCTTGTCTGGAGATTGTGTA CTTTTGTATCGAGTTGTGTGGTTGTTGTTGCCGTCCTGGTAGCATTTGTG ATGGATGATCCATCTTCTAAGACACCTCTCATCATCATGTGTGTCGGTGT CGTAGTCGTATTCATCGTCTCTCTCATCGTCGCAATCAAACAACGTCAAA TCAGTAACGTCGAACGAGACCGCGAACTTTTTCGTAAAGAAATCATGAAC TTAGAGAACAGAATACAAAAGAACAAATGGTTTTTGAAAGGATGGGAGAA AAGATCGTCAACGTGGAACCGTCTAATCAAATCCGTACGATCTGCACAAA AACTTGACAAATCGCTATCTCCCAAAACCGATCTAGTAGCAACTCCATCA ATTCAATCTAAATACCAATCCTTTCAAGCTCCACCACCTTTTGTACCTCC TTCAACTTCAGACGATTCCATCGAGTTGAATAACTTCGAAAAAGAAGGTG ACAAGATCTCATTGCACTCTAGCTCGTCTATCGAGGAGCAGAATACCGAC CAACCAGCACCAGCAACTGATCCTCAAGCTGCAGAACCATCAGGCCCTCC AGATATCAAGATCACCTTCGACCCTCCTTCAGCAGAAATCAAACCTCCAC CACTACAGATAGACCACAACCCAGAAGCTGCCACCAACAGCCAGTTAACA CCACCCTTACCACCTACCGATCTCGGGCTACCACCACCACCTTCATACGA AGCAGTACAGAATAACAAAACATACTACGATTTACACGAATTCCAATCGG ACAGAGATGAATACCTCCGTCTAGAAAAGAACGGTAGAAACCTTTTAGTA ACACTTGAAAAATACGTCGACTATAAAGCGTACAAATACTCGTTTTTCCT TCAACGTGATCTATGGTTAAACTCAGCTTGGAATGCAAATTGGACCAGCC TTTTACAGTGTTTACGTGTCTTGAACTCTAACCTTACGGGTGATTTTGAC CGCCCGTCCGCCCTCGATCTACAGCTTGCCCAGCCGTCCATAGATAAAGA CATCTTACCAAAAGATCCTCAAGATTCGAACGAACCACCGCCTCCATTTG TTAAGGAAACCAAGGAAATGCGTCTTCAAAGATCTAACGAATGTCGAAAG AAAGCGTTAGCTGATGTAGCGTCGCATACACCGTATACAGAGGAGTGGGT TGCTATTTTCGAGCGCATCTTACCAACAAATGGATGCATCAAGTCGTGGA ATATTCAGGGAGACGCCACCGATCATCTGATATTCTCATTAGAGCTAAGA CGATCAGCCACGGGAAAAATAGTCGGCATCGATGAAAACGCCAGTGGAAA TAAACTCGCCATTGGTGCATCGTTGATTCTCGGTAAAAAGTTGTCGGGAA ATATATCTTCGGGTTCGTTGACACTCAACGAAGGAATTGTCGGCAAAAAA GGACCTGTTTCACTCACCATAAAATCGTTGAGCTTCATGCAAAAGAAAAA TAAAACTTATATTCAAGTTTCAGATAAGAAGGCAGCATTTGCTATGGTTC TGGCGTCTAGTAAAGAAATTGTTTGGGAATGATTATAATTTTGTAATTGC TAATTTATATGTTAATTTTTTAATACCTATCCAATCATATTGGAAGCCTT TGGAATCATTTAATGAGTATTATTAGATTTTTCGAAAATAACGTCTTTAT CACTTTAACTCAAAACCAGCGTAGATTGAAATTCTTGCGTCAAACAAACA AAACATTTTTATTAAGTAGATTTAATAGTCATTCACCTAAGAAAGCACCG ATTCGAATAATCTCCAAAATTAGCATTCGTTTATTGTGTTGGATTAAAAC CGACTTTGACTTACTATTTATAAGAATCAGCTATTCCAGAAAAAGATTAA ACCCCGACTTCCGATATTTTAAAGACCATCCTGGATTTTCTAGACACTTT GGATTTTTTGTCGAATTTTACAGAGACTCCCTGAATTAAAAAAAATCTAA TTGACTCTCCTGGATTTTTCTAGGTTTTTCTAGCGCAGTGCGTATCTTTT TTTGGAAAAGTGCATTATTATTAAAATTTCTTCACTGTAAATATGATTCT AAATTTCTTTCAATAAACATTTTAAATTAAACGTATTAGAATTATTTATT AACTATAAAATTATTGCACAAAAAATTTATGTTACTGTATATCATTAGAT AAGGATTAATATTTTAATAAGCTGATTCGCACTGTATTGGACAGAGTCCC ATAGTCTAAAGATCAAAGAAACTTACGTAATCCAATTTTTGTTATAAACA AATTTCAGCTGTCAAATATGTTTGTTTGCAAATCTTTCAAACTCTAAATT CGATTTCATATTGATATTTTCAAGGAACTTTAATATTATGAATTCTGCTT TTTTTATATTTGAGCACTACTTTTTCTAGCATATTTTTTTAATTCTTTCT ACTTTTTGACTTATATTTTTTCTGAAGGATTTCCAAAAGCAAAAGCCGAT ATTTTTAATTTTCCACACTCTAGTGGGAACCGACAATATTTGTGTTTAAG GAGGGATCTCTGTGATATTAGTGAAGCTGAGTTTCTAATTTCGTTTTCCA ATTTCGTTTTCCAATTTATTTAAGATAATATAATTATTATAATGACAACC GATAAGATATTTGAACTCGTTTTCCAATTGATATTTCAAACATTATACAC GGTTTGGCTTCAACCAAATCTTCCTCTTCTCATCCTTTTATAAAATAAAA TATTAGACAGTAATATAATTATTCTAGAATATCTAAGTATGCTAAAAAGC TTCGAATATAAATTTATATCAAACTCGTATCCAGAACCACATGCACCACT TTTGATCTTACTAACTACAATCGAGAGCGCTATCAGAACCATAAAACAAC GAACTAAGGGACTGGATTCGAGTTTTATTTTAT

Coding sequence (CDS) from alignment at sc0000376:90086..97268-

>TCONS_00021001 ID=TCONS_00021001|Name=TCONS_00021001|organism=Clytia hemisphaerica|type=CDS|length=5193bp|location=Sequence derived from alignment at sc0000376:90086..97268- (Clytia hemisphaerica)
ATGTCAGAGATTGTTGATTGTATAGCATGGATCGTTCGTAAGACATTCTG
GTCTTTTGGGGTACTACTAAAATTCCTTGGACTACGATTACTTGATTTAC
TTGGATTGATCTTCAACCTGTTAGCATGTTGTACAATAGTACGGCTACCA
CACATGATCGCCGGTTTCCAAGAAATGTCCATGTGGGGCTGGCGATGGAT
CGGCTTTGTTCAATTCTTCATTTTCTTGATCGATATACCAATCTTCATAA
TGGGGTTATTCATCTTGTTTACTTTATGGCGTGTACCTCAAACTTATAAA
GAACTGAAGGAAGAGCTTCATTTAAAAGACTGGAGCGTTAATGACAGTGG
ATTTAAATACTATGGATGGAAAATTCGACAAATTGTTATTACCAATTTCT
TCAAATCATGCATTGATATTTTCTGTTTTCCACTGGCTTTGATATTGTTA
TTGTCATGGAGATGTGTTTTATTCATCAATGAGATGAAGAAAGCAGAATC
GGATTCGGATCGTCGTAAAACTTGTTTCAAACATTTCTTCCAGTTGTTGT
TAGACATACCACTTTTGATTGTTACCATTCCAGCAATCCTCTCCTGGAGA
CTACCGATTTACGTTTATCAAGTGAGAAAAGCCATCAAGAACAACGATGA
ATGGGACGAAATTCGACTCCTTGGAATTATCCAATGTTTTTATTTATTCT
TGGATATACCATGTCTCGTTATGTTCTTCATCACTTTAGTCACGTGGCGT
TCCCCCATCATGTTATGGCAGCTCAGCAACCCTGATCGAGCTTTCTATCG
CAAGAAACAACAGATGATTATAAGGAAAATTGTCACATTACAATTTCTGT
ACTTGTTTTTAGACATTCCTTGTATTATTTGCTCCATATTGATCCTTGGT
ACTCTGTGGAGATTACCAACTTTTATCCGGAGATGTAAAAAGCAATTTGA
TATCGTTCGTAATAAGACTGCTTTCTATAAGAAAGAAATGCACCTTCGTA
TTGTCTGTTTTCAAGAATTTTGTATGGTTTTCGTCGATTTTTTCTGCTTC
ATACTTTTCGTGATCGTATTCTTCACGTTATGGCGTACTTACCCCATCAT
CAAAGACGTTAAAGGTTATTTGAAACGATACAGCCAAGATAAGAAAGTGA
AAGTGATAGTCCCATCAGAAAACACTCCAATTTCAACATCTACAGTCGAA
ACGAACAACTCTGAAGAGAAACCTATTTCTTCTGAAAACGAAAAGGAGGG
AGAAGAGGAAGCTGAGAAAAAACCACCCTTGACTTGGTCCAAATGCATGA
CCAAAATCCGAAAAACAATCTGTATGCACTTCGCTTTATTAATCATCGAT
CTACCAGCTATACCGATTTGTTTGTTTCTCTTGATTACCGTTTTACGGAC
AACCCGATTGTTATCCGATTTGCTTGGCGGGAAATTCTACATGTTGTTTG
CAGTATCGGTGTATTACCACGCGTTACATTTCTTGATTGATGTTTTCTTT
ATTTGTTTGTTCTTGGTGTTAATGGTGTTACGACCTATTCAAGTCTGGAT
TAACATTCTAGAGGACGAGGAACATCAAAAACATAGGGAACTGAAAGAAA
TTATGAAGTGGTTTCCAGACATCGCCAATAGTCGACATGAAGTTTACCAA
CGATTAGATGACGTTTTAAGTTTAAGTTTTAAGAATGTTGAAAAAGAATT
TCAATGTTTGAGTAAGTTGAATAATGAAATGGATGACCTTATTGATCGTG
TAAATACCATTCTTGATAAGCTCTCTAAACATGAAATTGAAGACGAATTT
GTGACTCTCGTAAAGACTGTTATCTTTTACGAAAAGCAACGTACACAAAA
GTTGGTGCGTTTGTACACAGCGGAACATCACTTCTTACGTCGACCAGATA
CAAAGATTCGTGCACAAAACCTCGCTCTTCTACAACGCGAGAAATTTGAA
TATGACCGCAACCTAGGTGGAGTTTATGAGAAATTAAAAAATTACACTCC
ACCTCATGTCCCTTTATACGAATCCAAAACTGGTTTCTCTCTTCGATCAC
GTGACGAGACAAAAAAAGTTTTAATCAAAACATTACCACGTGGTGGGCTG
CCCGTTATTTTTGGCGTTTTAATTTGTTGTTTGCCACTTTACCGTGCGCC
GAAGTTGATCTATCGATTAGTTCGTCGTTGGTATGCACGTTTTGATATTT
TACGAGAAACTCTTTATGAATATGCGTTAGATTTCCTGACCATTCTACGC
ATCATTTTCGTTGTTTTGTTCCTGTATCGGGCGCCGTTTATGCTGGCTGA
TATCTTCGATTGCATCGTCGAAAAACGTAGCTGGGTTGCTGTTCGGAAAG
TTGTTAAAGAGTACCCTGGTTTTATAGCAGAGGACATTTATTTGTTGATT
AAGGCGTTACTGTCATGGAAAACGCCCCGTTTTCTTCTTACCGCCCTACT
TTTCGGATTTTTCATGCCGGCCGACCTATTTTTGACCGTTGGAAAAGTTT
GCACAGGCAGTAAGTGTATCGCATATTTAATCACTTTATTCTTGTACCTG
ATATTCATGGGTTTCCCATTCGCGTACTCGTTTTACGGTGCCGAGAAAAT
AATCGAATACGGACTAGCTTCGACAAATATGATCTTCATCAGCGTTTTCA
TTGGTATTTTGTTATTCGTTCTTTTAACAATGGTTATCAGTCTAATTCGT
GATCAAAAGAAGGTATTCTTGTTGAAAATGCCGGATGCCGATTACGTTCG
ATTTAACTGGTACAACATGCACGTGTTAGTGTTCGAAGGTTTAGAATTCT
TCCAATCGATTGCATTGATTTTCAAATTAACAGACATCCCAATGTATGGC
TCAAACCATTTATCAGAAGCTTCGAAAATCCTTTTATTCTCATTTTTACC
GTTTGAACCGATCTTTTGGATAACCGTCTCTGTTTTTGTATTTTGGTTCT
TAAGCTGTGGTGCGCCAATCATTTTCGAGAACATNTATTTATCAGAAGCT
TCGAAAATTCTTTTATTCTCATTTTTACCGTTTGAACCGATCTTTTGGAT
AACCGTCTCTGTTTTTGTATTTTGGTTCTTAAGCTGTGGTGCGCCAATCA
TTTTCGAGAACATTCTTGAAGATTTCCCTATAGGAACATTCGGTAAACGA
CCAAGTTGGAGATTAACCATATCGCTTCTTGCCAACACATTATTTTTATT
TTTCGTCGAGAACTTTATATCATTTAGTGCGTGTAATTATGAACATTGCG
CATCAAATTTCACCCTCGGTAATATCCAATCTAACGCCACTTGTCTACAA
TCAACCTTCGTCGAGGATACCTCCATGCAATGCTGGTCCGAACCCCACCG
AGATTATGCTGCTTTCGGACTCTTTGGTCTGGTATGGTACACCACCACCG
CTTTGATCTTTGATACCACCTACGGGGATCCAGACACAGTCGATCAGGAT
ATAGGCTTCTCCCCTATCTACACTACTGTCATCAACATCCTGAAGGCGGG
TATGGTTGTCTCCGCCACCATAATCACCAAAACGCCCTACGTCACTCTGA
TCTGTTTACTTGTCTTTAACATACTATCCATCTTGTTTACATTTGGCTTC
AAAATGATGTTCAAATTCTACCCATGTAATTTTATCAGTGTTCTTGTCTG
GAGATTGTGTACTTTTGTATCGAGTTGTGTGGTTGTTGTTGCCGTCCTGG
TAGCATTTGTGATGGATGATCCATCTTCTAAGACACCTCTCATCATCATG
TGTGTCGGTGTCGTAGTCGTATTCATCGTCTCTCTCATCGTCGCAATCAA
ACAACGTCAAATCAGTAACGTCGAACGAGACCGCGAACTTTTTCGTAAAG
AAATCATGAACTTAGAGAACAGAATACAAAAGAACAAATGGTTTTTGAAA
GGATGGGAGAAAAGATCGTCAACGTGGAACCGTCTAATCAAATCCGTACG
ATCTGCACAAAAACTTGACAAATCGCTATCTCCCAAAACCGATCTAGTAG
CAACTCCATCAATTCAATCTAAATACCAATCCTTTCAAGCTCCACCACCT
TTTGTACCTCCTTCAACTTCAGACGATTCCATCGAGTTGAATAACTTCGA
AAAAGAAGGTGACAAGATCTCATTGCACTCTAGCTCGTCTATCGAGGAGC
AGAATACCGACCAACCAGCACCAGCAACTGATCCTCAAGCTGCAGAACCA
TCAGGCCCTCCAGATATCAAGATCACCTTCGACCCTCCTTCAGCAGAAAT
CAAACCTCCACCACTACAGATAGACCACAACCCAGAAGCTGCCACCAACA
GCCAGTTAACACCACCCTTACCACCTACCGATCTCGGGCTACCACCACCA
CCTTCATACGAAGCAGTACAGAATAACAAAACATACTACGATTTACACGA
ATTCCAATCGGACAGAGATGAATACCTCCGTCTAGAAAAGAACGGTAGAA
ACCTTTTAGTAACACTTGAAAAATACGTCGACTATAAAGCGTACAAATAC
TCGTTTTTCCTTCAACGTGATCTATGGTTAAACTCAGCTTGGAATGCAAA
TTGGACCAGCCTTTTACAGTGTTTACGTGTCTTGAACTCTAACCTTACGG
GTGATTTTGACCGCCCGTCCGCCCTCGATCTACAGCTTGCCCAGCCGTCC
ATAGATAAAGACATCTTACCAAAAGATCCTCAAGATTCGAACGAACCACC
GCCTCCATTTGTTAAGGAAACCAAGGAAATGCGTCTTCAAAGATCTAACG
AATGTCGAAAGAAAGCGTTAGCTGATGTAGCGTCGCATACACCGTATACA
GAGGAGTGGGTTGCTATTTTCGAGCGCATCTTACCAACAAATGGATGCAT
CAAGTCGTGGAATATTCAGGGAGACGCCACCGATCATCTGATATTCTCAT
TAGAGCTAAGACGATCAGCCACGGGAAAAATAGTCGGCATCGATGAAAAC
GCCAGTGGAAATAAACTCGCCATTGGTGCATCGTTGATTCTCGGTAAAAA
GTTGTCGGGAAATATATCTTCGGGTTCGTTGACACTCAACGAAGGAATTG
TCGGCAAAAAAGGACCTGTTTCACTCACCATAAAATCGTTGAGCTTCATG
CAAAAGAAAAATAAAACTTATATTCAAGTTTCAGATAAGAAGGCAGCATT
TGCTATGGTTCTGGCGTCTAGTAAAGAAATTGTTTGGGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011779XLOC_011779Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021001-proteinTCONS_00021001-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021001-exon-sc0000376-1575043694:97180..97268TCONS_00021001-exon-sc0000376-1575043694:97180..97268Clytia hemisphaericaexon
TCONS_00021001-exon-sc0000376-1575043694:90086..96644TCONS_00021001-exon-sc0000376-1575043694:90086..96644Clytia hemisphaericaexon
TCONS_00021001-exon-sc0000376-1510915933:97180..97268TCONS_00021001-exon-sc0000376-1510915933:97180..97268Clytia hemisphaericaexon
TCONS_00021001-exon-sc0000376-1510915933:90086..96644TCONS_00021001-exon-sc0000376-1510915933:90086..96644Clytia hemisphaericaexon
TCONS_00021001-exon-sc0000376-1491911889:97180..97268TCONS_00021001-exon-sc0000376-1491911889:97180..97268Clytia hemisphaericaexon
TCONS_00021001-exon-sc0000376-1491911889:90086..96644TCONS_00021001-exon-sc0000376-1491911889:90086..96644Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:90086..97268 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.3647 2.11758 4.41936 5.17038 12.124 8.07554 6.16155 7.11365 3.65287 5.72453 7.89797 4.35903 8.86636 5.53141 3.63191 6.99969 4.24788 5.88373 7.44748 9.37029 7.25488 7.8939 2.95342 4.3876 7.3983 8.7755 22.0005 20.2828 55.2919 49.1713
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021001 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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