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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020938 ID=TCONS_00020938|Name=TCONS_00020938|organism=Clytia hemisphaerica|type=transcript|length=3055bp
CCAAAATCATACAACCGTGGCTGGAAAGATACAACCTTTGCAGGTAAATG
TTTCACGGTGGTTACCATTTGACAATGGAAGGCTACTTACACTCACTACT
TACGAAGAAATACCAGCCAGCTCATTGGTTCGAAATGCCTTTAGATTGCA
CCACCCAACGTGATGGCTTTCACCGTACCGAAGAAATTTGCAATTGACAC
GTGAAAAGATTTAGAAGTATGGGAATATACGGCGGAATCTAACAGAACAA
CCAAGGATGGCGACACAAATGACTCAAGGGGTAATTCTACTCCTGGTTTG
TTTCACACTGGCCAATGTTTATTACTTCATACAAAACTACAGCCAGAATA
CGTATTTCCAAGAGGTTAGAAGGACTTTGACCATcgtcaaaaataaagaa
gagaACGTCGATGTTACTAACACGGCGAAATCAAGTTCCGGTGGGTTGAC
TCAAGTTAATGAGATATTGAAACGTTTACAAACTTTGGAAACGAAGCGAA
ATGTAGACATGGCcaataaaacaaaaactgtTTTGGATGGACTGATGGGT
AAGTTCTGGCCAAACGGTCAACAGGCTAGTGTGGCTGACGAAGCTGAAAA
TCTGAAATGGTTAAATCGTACGAATGCGAAAGGCTTCGCGGAATACGGCG
ACGGTACGTGTCCCGTCACAACAGATCGTCCACCGTGGCAAAAATTACTT
CGCGAATGGGTAAAAATCGCTAAGAAGTATAAAATCCGTTATTTCTTATC
TGCCGGTTCGTTACTCGGGGCGTGGCGTGCGGAAGACGTGATCCCGTATG
ATGCAGATATGGACATACGTATCCACAtcgatgattttgaaaaactctaT
CCGTTACGTCAACGTAAGTTCGTGTGGGACGCGTATGATGATTACGAATc
gcatttttattttacgaaggATTGGCGATTGCCGTACGATTTACGGCGTC
GGTATACGTGTAAAGGGAAGAAGGTTCATGAGTATGAAGGACAATGCTCA
TTTACGGACCCGAACGCACGTATGATTTACCGTCAATGGCATATGGACTT
ATACGCATACACAACGTATACTGACGTCGTCAAATTTTTGCCACGCGACG
CCGCGTACGAGTACCGTAAGGAAGATATTCTACCGATCACTAAATGTATG
TTTATGGAAATTGAAACACGATGTCCACAAAATCCGACGGCCATTTTTAA
AAGACTTTACGGTAGTTCAAGACCTTTGCCTACCAAGAAATGTGTAAACA
AAAAGTACGTTAGAGTCTAGATTTAGAGCATCATGAATTTAAGCGTTCTG
ACATTTGCGTTTTgtaatagggggggggggttcaactTTTTCAGTGTATG
TTTTTAGTTAGCCATAAGATAGCATTTTGAAGCTTCTGTCTTGTTTATCt
caatattttatctttttttaacattatatTCTTTACTCGCGCTATCATTT
GGGAATTTTTCCTCACCATGACCTTTTTAGGGAAATTCAAGTTTAcaaac
actgggcgaaataagagatatcttgaaaatatgatatttccaattacttt
tgtaaatatggaaatatgacttttctatatttccaaagttgaggaaatat
catatttcatgatatttccaaatctgaaacatcaaattttcaaaatatga
tgtttcaacaatgaatttcagaaaagtcatatttccatcaaggtcaaatt
ttatcaatgaatacacatacacgttttttataagactaTCCAAGATTTTG
AAGCCTGcggatgttcttaagtttttgagttttaagcctagaaaTGATCT
TAAAGAGTTCTTATTTTCTCACTATTTTGTTGGTATATTtctccattttc
ctaagaaattggatgttttagagtccacaaacatataaaaaaaacgtgta
agctaacgaaattttgtacaaaatttcgaatgtttttttcaaataattat
cAATAAGATTCTATTATCATGAAACTTTGAACCTATCTCGTTAAGTTGac
aaagttcttataaaattagtGTAATGATATcttataaaatttacaaaaac
aacaacaatttatgaaaaataacaattacATTTGGAGACGCTTATGCATC
ATGTTATAACTTGCAATACCAAAATATCTTTGatgcaaaatatttgttta
aggTGAAACGATCCTCCTTCGAAAAAGCCACTAAGGATTTCTTAATTCTA
AAAAAATAGGGTGTCAGATATGAAATATATCAATATTGCCCTAAAACAGA
GTACAGGACAACAGCAGATAGGACATAGACAACAGGACATAAAGTTAGAG
GACTTGAATAATTAGAAGTTCCCCTTTAATTATGTCTTCTCCTTCAAGAG
TATTCGCTGGTCTTCGCCAGCGATCAATAACCTCCTTTGCTTCGACTTTG
ATTTTGCCTTGTTTGACGTCATTGTCGAGAAAGGCGAGGTCGGTCACGTG
TCTACTTTCAATACATGAATCCACGTGTCGATGTGCGATAATGATGTGAC
CACCTGGTTTCACATATCGTATAATGTCCGTCAAGCATTCGTACCCAGGG
TGTGATGCTGAACAAAACAAAACACCTGATGAACAAACAACGTCATATTC
TTGAGACGGGATGACAGAATCATCGTCTCCACTTTTCAGTTGATAGAATT
TCTGCATTTTTCCTTTCGATCGAGCAACATCAATGATTTCTTTGCACGGA
TCTAACCCATCAATATTTTGATAACCATGTTCAGAAAGAAGATCAGAGGT
TGCGCCTGTACCACATCCATAGTCAAGGATCTTGATATTTTTCTCATTCG
AATACAACTTCAGGATTTTTGTAGCCACAGCTTTAGGGCCAGAATATTCT
TCCTCAGAAGCCCACTCATCGTACGTTTTTGCGTATTTACTGTAAAGTTC
TTGTTGCTTGGCAAACTCTTCACTCGTATCTTCACGTACATCGATGAAAT
ATGACCATGCTACACTGGAAAAGTTTTCCGCTTGTTGTGTTACTGCAGCC
ATCCTTTTTTAGGTATGTTATGTCTGCACAACTCTCTCTGCAGAAAATGA
CACTT Run BLAST on NCBI protein sequence of TCONS_00020938-protein >TCONS_00020938-protein ID=TCONS_00020938-protein|Name=TCONS_00020938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MATQMTQGVILLLVCFTLANVYYFIQNYSQNTYFQEVRRTLTIVKNKEEN
VDVTNTAKSSSGGLTQVNEILKRLQTLETKRNVDMANKTKTVLDGLMGKF
WPNGQQASVADEAENLKWLNRTNAKGFAEYGDGTCPVTTDRPPWQKLLRE
WVKIAKKYKIRYFLSAGSLLGAWRAEDVIPYDADMDIRIHIDDFEKLYPL
RQRKFVWDAYDDYESHFYFTKDWRLPYDLRRRYTCKGKKVHEYEGQCSFT
DPNARMIYRQWHMDLYAYTTYTDVVKFLPRDAAYEYRKEDILPITKCMFM
EIETRCPQNPTAIFKRLYGSSRPLPTKKCVNKKYVRV Run BLAST on NCBI transcript from alignment at sc0000374:147516..161872+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020938 ID=TCONS_00020938|Name=TCONS_00020938|organism=Clytia hemisphaerica|type=transcript|length=14357bp|location=Sequence derived from alignment at sc0000374:147516..161872+ (Clytia hemisphaerica)
CCAAAATCATACAACCGTGGCTGGTAGGtttctttatttattttattagc
tattttatccctttttttctatgaaatgtTTTGCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCC
CCCCCCCTCTACACTAACTGCAAAGGAAAACGTCTGGTTGGTGGTGCGAG
GGGATGCTAGTTTCCCCTCACTTATGAAATTAACCTTGATTGACTGTATT
TGCTTTACCAATCAATTGATTCAACTTTTGATCCATTCTATTGAAACTGT
CTGCAATTAGCTAGCAAAAagatcaatttctgaaaaagatcaatttctga
aaaataacTCCTTTTTCAGTatatttcataatattttttcaggaaaaatg
tCCTGTAAGATTATTTTTAATGGGTGGTTTCTATAAACCTATTCACATCC
AGGCTGGAAATGGTGCACAGTACGCCAAATATATTTGGAGTGAGGCAGTA
ATTACTTTTGGCATATTGGCGTAAGGAGCGGATATAAAGTAAGATATTGG
CGTAGGCATTTCAAGACGAGAGAAGCACCCCCATTTTAACGCCTGATTTC
ATGACGCCAGGTTTAAGCCGCTCCATCGACCGCCATATAAGGACGTAGAG
CGTAAATAGAATATAAAGCTTATGAGCAACTTTTAGGGGTGAGAAAGCAA
ATATCCCTGGACCCGTTAAGGGGGGCTTACAGCAccttaacccccccccc
ctctgcAATTTCGCTCTTCCGCAAGCAGAACTTTTTTTGGCGTAGACCTC
AGTTTTAACAAATAACAATTCGGTATGGACTTTGCATTATTTCCACACTG
GAAAACGTGTAAGCATCAATAATGGCTACGTATGAATGAAGAACAATCTT
TACTTGAAACTTATTTTAGGCCACGCTTTAATCAAAAAGGCATTTTGTAC
CTTTGGAATACGTTTaactagcctagaaatctaagctactTTGATTTAGT
CAACTAGGATAAATTTGATGGTAACTGAATAACTAGTACAGTAACAATAT
TCCAAGGCAAGttttaaaatccgtaaatataaaaaatcttttaagcgccg
aaaacgctatatttcCATTATccccgtgtgtcctagccttgtgaatacgg
gtttagttaactaggctaacaTTTAGCTACCTATTATCTCGTAACTGCAA
tagtagactagtaaaccacgtcgttgtatttcgctgcagattaaacttgt
AATGGGATCTATTTTTATATGTTCACTTTCTTTCCAAACCACTCttccgc
ggcaatttctattttttgttagaactctttattataagcactattcccac
GTTCATGTGTCCAAGGAAAgtcagacgcttgctagtctactgCAATAGAT
ACACTCAATGATTGTGAAGAGATTTTTATGAATCCATCCATCCCTTTTCT
TACATTAGGAAAGATACAACCTTTGCAGGTAAATGTTTCACGGTGGTTAC
CATTTGACAATGGAAGGCTACTTACACTCACTACTTACGAAGAAATACCA
GCCAGCTCATTGGTTCGAAATGCCTTTAGATTGCACCACCCAACGTGATG
GCTTTCACCGTACCGAAGAAATTTGCAATTGACACGTGAAAAGGTACAAT
CTTCCacaccccagctggcacacaacgttgtttcaacgttcatctaacgt
tatatggtggatgttgtgaacgttagataaacgttgaaacaacgttgtgt
acgaTCTTCACACTCATTGGAAAATTTATACTTGCCGTAGACGATCCTAT
CCTAAGGTCAATAAAAGTGGGATAATTATTAGGAGTATGGATTAATTTGA
TAACAGAGGTGAGCTCGGCACGGAGTAAAcagttgtctgtacacagaccc
agtgtctacggcttatttcaaaattcattacctgtagttgtcattgtctt
ttctcatttgagatttttcaaactgaccgctgctacactctggtacagaa
tAGTTAAAACAGTGATGGGTGTGTTTGCAGTGTTTGCTGGAAACTCTGCC
GTTTTTCCTTCTTCTGTCCATGGCAGTAAACTTCGCGCTAATATATTTTC
CCACGTTTTCTACCCCTACAAAGGATGATAGCATCTTTTATACTCTTGAa
tgactactttaggcgtacaaactttcgcgagcagaaaatTTCGCCAGGTT
TAAAAATGGCGAAATCTACGAAAATCGTGGTTtgtgctcgcgaaagtttc
tacgccaAAAGTAATATACGGGAATATCCCGGAAGTGTTAGCAGACTAGA
TTAAACtacattttttatgagaataaagCTTGAGAAGATAAGGGCTCGAT
gccaaaatttgagaatatttaaaaaatttttaaggctttgatcACTTAAT
actaaaattaagaacatttcattttaaaacagGCTTAAAACccataaaag
taataattacaaaaaagatttttaaaacgtGTGTGACGTTTGAAAGACTT
AAGATGTCAGGccgattaaaaaagttttcacagcaaaaatttaatggttc
ttatataaaaaaggtgtatttgatGTCAGGCTGTCAGATTATCTCGTGTT
CGTATTACATTTCTTTTGGTTTTGTTGACCATATTAAAGTTTGTTATCTT
TTCTGAGGGTTTTTATAAGTTGAAAAGCGTGTACAAAGATttgaatgact
ttttttttaatatacttTGATGTAGCAAAGATTGTATTGGTAGATAAGTC
AAGAgaatttataattgaaggttgatGTACTGTACTTTTTAGATTCTGTT
TTGGTTGTATGGGCAAATTAAAtaggcttttttataagaatacactttat
aagaatgtccatgatgaaaatggccagaAATATCATAAGAACATAATAAG
AATAAGAATATTTCATGAATATATTTCTGCTTTTataattttctatttca
tttaCTTTGTACTTTACATAGCTGTTTAGTACATTGtgtttattcttttg
tttttacgATGATTTTGAGACTATGACGATGATGATTTcgaccaaaaagt
taagaatatccatgatgaaatggagttacaccattctttaaaaaaagcgt
gtatgggaataaaaatagaaagaacctttttaaaaaatttcagtagCACA
GCCGAAGGATTTTTCatatgcgagttacgagttacgagttaaagttgcat
ttagaaccacgagttgCGGGTTACTTtgtacgagttacgagttacgagtt
gcattttaacaaaataaaatccagGAGTAAAACNTATTTCTTTTGGTTTT
GTTGACCATATTAAAGTTTGTTATCTTTTCTGagggtttttttataagtt
gaAAAGCGTGTACAAAGATTtgaatgacttttttttaatatactTTGATG
TAGCAAAGATTGTATTGGTAGATAAGTCAAGAgaatttataattgaaggt
tgatGTACTGTACTTTTTAGATTCTGTTTTGGTTGTATGGGCAAATTAAA
taggcttttttataagaatacactttataagaatgtccatgatgaaaatg
gccagaAATATCATAAGAACATAATAAGAATAAGAATATTTCATGAATAT
ATTTCTGCTTTTataattttctatttcatttaCTTTGTACTTTACATAGC
TGTTTAGTACATTGtgtttattcttttgtttttacgATGATTTTGAGACT
ATGACGATGATGATTTcgaccaaaaagttaagaatatccatgatgaaatg
gagttacaccattctttaaaaaaagcgtgtatgggaataaaaatagaaag
aacctttttaaaaaatttcagtagCACAGCCGAAGGATTTTTCatatgcg
agttacgagttacgagttaaagttgcatttagaaccacgagttgCGGGTT
ACTTtgtacgagttacgagttacgagttgcattttaacaaaataaaatcc
agGAGTAAAACGTATCCAGGGAAACTTTGGAAAAGTTGCTTATGTTGGGT
GTCTGATATACacgtattttttttataagaatattcaaaatttttgaagt
cttcggatgttcttaaccttgtgagatttaagcctaaaaatgtttttagc
atattcttatttttcccattttgtgagtatttaaAGTAGGGGGCAGAATG
TTTTAAAAGGTCCTTTTTCTCGATCCAAGGTCGTAGCGAAGTTGAGAAGC
TTAGCTTATGTTTCCTCTTTTTCATTATTCAAAGAACTACTATGTTTAAA
TTCTTTGTGtaatcattttcatttatttgttgttttttttaagaggaATT
TTTTCCCTATGAGGGAAAAGGTGTTATGAATGTTATGTTGAATGGGAAAT
TATTGTAAGTTTGTAATGATGAGAGTTTCGTGGGTTTTCTCGAAAACTTT
TCCCCTGTTAGGGAATGAATGTATGTAAGTGTAAGATTATAACGATAACT
TTTTCAGAAGagtaaaaaagaaacaaactttGTGAAGAAGAAACATTCTT
AAATCTTGCTTCCATTCAGCTGCTTCCTTTTAAACGTCCTCATACTGATA
AGTTTTTCTCAATCTACCTTCGAGacattttttctgaaatttttgtaATT
GTGGATGGACCATTTGAtgtgttttttcgaaaatcagtcTATAGTCCTGT
CTAGTCGCTAGCCTGTTATTTACGTTTAAAAAACAGTAACAAACATGGTT
TATAAACATTCTTAACCAGTCTTAACATGTACGGAACTTTTAGTAAACTT
AAAACTCTGCATGATTTAAGAAAGTTTTAATTTAACAGAATATTCGTGCT
ATAGCTTGACgagtttgaaatgttttcataAACGGTGATCCGACGGTGAA
TGAAGAAAATGTTTGTTGTAAATGTCTCAATGTCTGGCAATGACTTTTCA
GACGTAGTTTCgccatttttttcgaaatacaGTAGTTATATTGTTTTTTG
GACTAGATAATTTTACGAGAAATAACAATGGTATAAAAGAAGcccccaag
cggttttcgtgatgacgtGATCTAGGGACTTTTTTGCAGTGTGGTTACGt
gatttgaaaattctttcttcgtgattgcgtgataaGAGGTCAATATTcgt
gatacgtgatttggactttttcaaagggatgcgtgattatccattttttt
tgctgatttgcgtgatcgtgattgaagacaaaaaattgtgtGATATCGTG
ATCAAGAGTTACCGCTGGGCTCCCCCCCCCTCATGATTAATTTTCTTTAA
TTATTAATTTAGgcgagaaaaatttaatttattgttctacgggaAGACCC
CCAGAAAAATATGGGTTGGTcggtataataaaaataaatttcttaaaatc
tagtGTCGGAAtgtcaaaatctaaaaaaattctTACGTTTTGAAGCAGTA
AACTTTCTCCTCTTTATCGATGAGCGACTTTCGTGACATTTTAATTGGGA
TATTTTAAATTCATCTAACTTGTGGGATGAATTTACACtttttcaacttg
ttcagtCAAAAATATCTGCAAAAAACTTATCAAGTCCCGTCCTCTAACTT
TGCAAATTCAATGTTATTATTCTTtcgattttgaaaataaaaacagggTC
GGTCGGAcctgtagaacaataaattaatttggtctcgccttatCTTTAAG
GAGGCctccccagcggacccaaaattcatgccaccacgccaatttttttt
tcgatttcgcgccatcacgcctgaaaaattcgATTTTCCCATGTTCATGA
TTTTCCCGATCACGCCAAGTTTTTCGATTTCATGCCATTACcactagaaa
atttagttttcacgctcatattcTCTGGATACACTCAGTTTTAGACCGCG
TTTAGACACATTGGTATGGATAAAATGCCGttatataaacttaattttta
cccacaaatataatttatataatttttcctatcggaaacacccgaaaaat
ctggaaggaatttgacctctgtttttctatttttagtaatacacaggggt
caaattcgggtgtttccgataggaaaaatgacgtaatcttgacttatgca
tatcaataattgttggacaactggtcacatcaaagggcaccggtttgagg
gctgaggtatatttgagtaaattgactaagcccaccatggttgggcaacg
gagaaaatttctgaattttgaagggttattttatttatttcaattcaatt
tgaaaaatgattcatgtaaaaataatggaaatcttttaaaagtacaagca
acttttttggtaaaaacatgagGGGTCATGCCTCCCTAATCCCCCCGTTG
ACGGGacccatgggcattaattgtgaattagcatgaatagttttcaaaag
gggaacgaggaggcTCCACCCTGGTTGGCGTCGACGGGAgacattttcaa
tttagtatggctaaaatcgctctcatttactctctttttttccaaaatat
ggtataaacatcacaggattcctttgatcaataccaatctgctcaaaatt
acacctcaaaataaacctgttgcttctttctgtttgaggctttgctataa
atatatatattttcctgaaataaagtaCCTGATGTCTTTGATGCATCTAA
TGAATAAGCAATAAGAGATTTTCGACCCTCTCATTGCAttcaactttatt
ttgaagactagctagcaactgctaaagacaattggaagttacaaggataa
atggcagatgaataaaaCTGTTTGGACCGTTTCTTTTATGCTTTTAAATG
AGATCTGTAGGAGGCTCCGCCATATTTGGACATAAGttcataattttgaa
atttagaccctctaaattggctaaaatggacatagaattacgtttcaagt
aataaatataattttcacgatcacgctgaactgcaaatttcacgccatca
cgcctaaaaaaactcaatttcacgatcacgccggcacttcatttttaCGC
CATtacgccgtttttttcaaaatttcacaccatcacgccacgaaaaccct
ccatcacgccatcaagccaaccgctggggggcgcctctttaagttatcaa
aaattatcaagaaCTGAAAATCTTGAGTGTTCTTTGgaaacaaaagttga
aaactCAATTGTTCTTATACAACATCTTCTGAgtatttttcctaaaaaaa
actCTGAATCtgcaaagcctcaaaatgttcttaacttgtgcTTAATATAT
TTTGTCCACCGAAGTCTTATGTCCTTATactgtatagtttgttcttataa
aaaaaacgtgtatctacCAATTTGATTTGCCTAAGGGGGTAGTTTCTCAT
ATACTTCTTACAAGAAAAtccaatatttttgaagccttcgagtttaaagc
ctgaaaatgttcttaaaatgttcttactagAGTTtggaaagccttaaaat
ggtctTAACTTATTCGTAAAATTTTAAGCATGGAAacctaatgttcttat
atagtttgttctaggACATTCTAGAGTACGatacagatgagatggagttt
ttataagatactttaataattggtcatttgaagtaataaaattgacccga
tttttagaaaaaggtTGACGTCACTGGTTGACGACCGACCAAATCAAAAA
GAGCTTTTAAAACTCCATCCCGTCCCGTAGGGTATCGTGAAACGAAACTA
AATGGGAAAGTATATGGAGGGGAAGAAAGGTCCTATTCCGAAGAGTATAC
CATTTCCCCCAGAAAGCCTCTTCTACACTTTACAGATCATCTAAATAATG
ACGcaatgtttcgagctccaaccctgaccctaactgataatttcgaaata
atcaaaaatcgaaaatatcgaaaaggtCAAAAAGGAAGAATAAGAAAAGT
CCAATTTTGATTCATTCCTaattgtttatcacgggaattaactacagggt
gtccctaattaaagtatcgagtttgaactagacgatgttatcgtccgtta
cagtgatagtaaaggcgggaaaaaatggcggtatggcgttatggcggtat
acggaaaaaaatcggcgggggAGTTTNNNNtttgttttgattttttcgaa
taccGAACACAGTTGGCCTCGCATACGGAAACTCGAATACGTACGATTTg
ggctgtttttgtattttgtgccAAAATCGTATAGTCTAAGACTAGCAACT
CTACCgaactgtaaactcttttcgtcaaaaaaacccgtttgcgaattttc
ttcggctttgggcttttttctttgatagtgattcgtcttagactataaaa
tagtctaagtttgaacatgcgattgagtagaaaagtgttatgtgcgtgtt
cacaaaattgtattttaagctctccctcttttttctttgtcattacgatt
aatttatacgttgtaactaccttttgtaataagcctgtgtgatgNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNgatggagaacgttcttatattttagcgataacacacaca
aacttttctactcaatcgcatgttcaaactcgatactttaattagggaca
ccctgtacatgtggtctaaaagaacgacaaattacgcatgcgtgttaatG
CAGAAGTCTGATTTTTTAACTCTTCGGAATGGGACCTTTCTCtgaccatg
gaggtaataaaaatatagatggagtaACAACTTTTTATGTAATAGCCAGA
TAAGTCATAAAActctttgaaatttatttcaaatcggcctcctttgatta
ccaatccttgatagcaaaaatcagtcaagatatagattataagaactaaa
gtaaagttattctgTCCAACGAAACCTCGTATTTTTAGGGAAAATGCGAt
tttttttcgagtaataatttctttatagttttaaaagaagttttcatttt
atcgggaaactttcgagaggtaaacttcttcaaattttgcgaattctttg
ttgtttgtggaaggttctttgctataaatatctttagatctaaaatagca
gctgcctcaaaattttgatagaatatagttgaaagattggcattagtaaa
tatgtaaaaattgacaaaatttggcGAGGATTCCCTGAGAAGcgaacatt
tcaaattcgatgttctgtgcttattcttgcaagtttttcttatgttttat
aaacaaaactgtcatcacacaacgaacaaattaaaaatgtagcgtgatgt
tattcaaattctcttcgactgaagtattcccatgagcgaaagcaaaatta
atggctttttcccaaagcaataaagcaacagtttgctatcaacggtacaa
tacaatagaatagtaggagtgttatctccatctatatttttattacctcc
atgcaCTGACTGCATGCGACGTTtaattgatgatattttttgacaaagga
aattaaaaatgccttaaCTTACTGCCATTAGTCAATTAATAATGTTGAGT
Ctcataagaaaaaaacgtaaaaaatgtaatgtatttttattaaaaaaaca
cgAGTCTTCGGGGccaaaaaactgattatgaAGGCTGTTATTTCAATTAC
AATAAATTAAAATGCAATTACACTAAAACACtcttaaaacttaaaataag
aacattttaaggttctttttaggcttcaaagtaagaaaaaaataagaaca
ttatcCGAAGTCTTCAAAATTTGTAGACGTTCTTATAACAAAATCCGTGt
aataaattttctaaaatttctttaattaaTTCTATCATCATCATGTGCGA
TTAAGTTGTCGCAAATTACCCATTaaattgggacaagctggagtttttac
aagctcttatatgatttggttggtcgttaagttaatttcattactttttc
taaagaatgcgtcatctctattacttcaaatgaccaattagtgaagtatc
ttataaaaactccagctcgtCCCATTAAATTTCCAGTTTTTCATGACATA
aacgcaaaaaaaacaaaatattgcaAATGTTGCAAAAAACAGTTTCTAAG
TAAACTAAGCTGTATATCGTAGCCAAagcttaaattcattttttctattC
ATTCATCTTATTTATTATCCGATTCTTTTTGAGATCTCATTTAAGGTTTT
TCGTGATGTCGTGATCGATGAAGGAAGCATTAGTTGCATGATATAATGTA
ATCTACAAgtattcaaaactttttgtaaTGTCTCTCTCTAGAAGAAACTT
GTTGAGCAGTGTTTTGataccgtgagatcaggtaacttgcatcattggag
ggaaacttgcatagccatcaaatgactgaccaatcaaagcagcaaaattt
caaagcaaatgaactacgcagcttcgctcacagctctactctactatttt
tgttttgatttaactttgtattttaatgaccagccaggtcattcatttga
gggctatgcatgttagcctccattgatgcaagttacccgatctcacggta
tatcaCGGCTTGCACTTTTGGTTTTTGGTAAAACGCATTTTAAAGAGAGA
ATGATCTAAATATCTAACTGTAAAAAGAACAAGCGGATGCTCCTCAGATA
GAAAATAGGCTTATAATAGAAAGTCAcagatttcaaactttcagccaAAC
TCTATCAGGTTCTGGTGTCATGAAATAAGTGTATtagtatattttttgtt
ttcatttcagATTTAGAAGTATGGGAATATACGGCGGAATCTAACAGAAC
AACCAAGGATGGCGACACAAATGACTCAAGGGGTAATTCTACTCCTGGTT
TGTTTCACACTGGCCAATGTTTATTACTTCATACAAAACTACAGCCAGAA
TACGTATTTCCAAGAGGTTAGAAGGACTTTGACCATcgtcaaaaataaag
aagagaACGTCGATGTTACTAACACGGCGAAATCAAGTTCCGGTGGGTTG
ACTCAAGTTAATGAGATATTGAAACGTTTACAAACTTTGGAAACGAAGCG
AAATGTAGACATGGCcaataaaacaaaaactgtTTTGGATGGACTGATGG
GTAAGTTCTGGCCAAACGGTCAACAGGCTAGTGTGGCTGACGAAGCTGAA
AATCTGAAATGGTTAAATCGTACGAATGCGAAAGGCTTCGCGGAATACGG
CGACGGTACGTGTCCCGTCACAACAGATCGTCCACCGTGGCAAAAATTAC
TTCGCGAATGGGTAAAAATCGCTAAGAAGTATAAAATCCGTTATTTCTTA
TCTGCCGGTTCGTTACTCGGGGCGTGGCGTGCGGAAGACGTGATCCCGTA
TGATGCAGATATGGACATACGTATCCACAtcgatgattttgaaaaactct
aTCCGTTACGTCAACGTAAGTTCGTGTGGGACGCGTATGATGATTACGAA
TcgcatttttattttacgaaggATTGGCGATTGCCGTACGATTTACGGCG
TCGGTATACGTGTAAAGGGAAGAAGGTTCATGAGTATGAAGGACAATGCT
CATTTACGGACCCGAACGCACGTATGATTTACCGTCAATGGCATATGGAC
TTATACGCATACACAACGTATACTGACGTCGTCAAATTTTTGCCACGCGA
CGCCGCGTACGAGTACCGTAAGGAAGATATTCTACCGATCACTAAATGTA
TGTTTATGGAAATTGAAACACGATGTCCACAAAATCCGACGGCCATTTTT
AAAAGACTTTACGGTAGTTCAAGACCTTTGCCTACCAAGAAATGTGTAAA
CAAAAAGTACGTTAGAGTCTAGATTTAGAGCATCATGAATTTAAGCGTTC
TGACATTTGCGTTTTgtaatagggggggggggttcaactTTTTCAGTGTA
TGTTTTTAGTTAGCCATAAGATAGCATTTTGAAGCTTCTGTCTTGTTTAT
CtcaatattttatctttttttaacattatatTCTTTACTCGCGCTATCAT
TTGGGAATTTTTCCTCACCATGACCTTTTTAGGGAAATTCAAGTTTAcaa
acactgggcgaaataagagatatcttgaaaatatgatatttccaattact
tttgtaaatatggaaatatgacttttctatatttccaaagttgaggaaat
atcatatttcatgatatttccaaatctgaaacatcaaattttcaaaatat
gatgtttcaacaatgaatttcagaaaagtcatatttccatcaaggtcaaa
ttttatcaatgaatacacatacacgttttttataagactaTCCAAGATTT
TGAAGCCTGcggatgttcttaagtttttgagttttaagcctagaaaTGAT
CTTAAAGAGTTCTTATTTTCTCACTATTTTGTTGGTATATTtctccattt
tcctaagaaattggatgttttagagtccacaaacatataaaaaaaacgtg
taagctaacgaaattttgtacaaaatttcgaatgtttttttcaaataatt
atcAATAAGATTCTATTATCATGAAACTTTGAACCTATCTCGTTAAGTTG
acaaagttcttataaaattagtGTAATGATATcttataaaatttacaaaa
acaacaacaatttatgaaaaataacaattacATTTGGAGACGCTTATGCA
TCATGTTATAACTTGCAATACCAAAATATCTTTGatgcaaaatatttgtt
taaggTGAAACGATCCTCCTTCGAAAAAGCCACTAAGGATTTCTTAATTC
TAAAAAAATAGGGTGTCAGATATGAAATATATCAATATTGCCCTAAAACA
GAGTACAGGACAACAGCAGATAGGACATAGACAACAGGACATAAAGTTAG
AGGACTTGAATAATTAGAAGTTCCCCTTTAATTATGTCTTCTCCTTCAAG
AGTATTCGCTGGTCTTCGCCAGCGATCAATAACCTCCTTTGCTTCGACTT
TGATTTTGCCTTGTTTGACGTCATTGTCGAGAAAGGCGAGGTCGGTCACG
TGTCTACTTTCAATACATGAATCCACGTGTCGATGTGCGATAATGATGTG
ACCACCTGGTTTCACATATCGTATAATGTCCGTCAAGCATTCGTACCCAG
GGTGTGATGCTGAACAAAACAAAACACCTGATGAACAAACAACGTCATAT
TCTTGAGACGGGATGACAGAATCATCGTCTCCACTTTTCAGTTGATAGAA
TTTCTGCATTTTTCCTTTCGATCGAGCAACATCAATGATTTCTTTGCACG
GATCTAACCCATCAATATTTTGATAACCATGTTCAGAAAGAAGATCAGAG
GTTGCGCCTGTACCACATCCATAGTCAAGGATCTTGATATTTTTCTCATT
CGAATACAACTTCAGGATTTTTGTAGCCACAGCTTTAGGGCCAGAATATT
CTTCCTCAGAAGCCCACTCATCGTACGTTTTTGCGTATTTACTGTAAAGT
TCTTGTTGCTTGGCAAACTCTTCACTCGTATCTTCACGTACATCGATGAA
ATATGACCATGCTACACTGGAAAAGTTTTCCGCTTGTTGTGTTACTGCAG
CCATCCTTTTTTAGGTATGTTATGTCTGCACAACTCTCTCTGCAGAAAAT
GACACTT Coding sequence (CDS) from alignment at sc0000374:147516..161872+ >TCONS_00020938 ID=TCONS_00020938|Name=TCONS_00020938|organism=Clytia hemisphaerica|type=CDS|length=1014bp|location=Sequence derived from alignment at sc0000374:147516..161872+ (Clytia hemisphaerica)
ATGGCGACACAAATGACTCAAGGGGTAATTCTACTCCTGGTTTGTTTCAC
ACTGGCCAATGTTTATTACTTCATACAAAACTACAGCCAGAATACGTATT
TCCAAGAGGTTAGAAGGACTTTGACCATcgtcaaaaataaagaagagaAC
GTCGATGTTACTAACACGGCGAAATCAAGTTCCGGTGGGTTGACTCAAGT
TAATGAGATATTGAAACGTTTACAAACTTTGGAAACGAAGCGAAATGTAG
ACATGGCcaataaaacaaaaactgtTTTGGATGGACTGATGGGTAAGTTC
TGGCCAAACGGTCAACAGGCTAGTGTGGCTGACGAAGCTGAAAATCTGAA
ATGGTTAAATCGTACGAATGCGAAAGGCTTCGCGGAATACGGCGACGGTA
CGTGTCCCGTCACAACAGATCGTCCACCGTGGCAAAAATTACTTCGCGAA
TGGGTAAAAATCGCTAAGAAGTATAAAATCCGTTATTTCTTATCTGCCGG
TTCGTTACTCGGGGCGTGGCGTGCGGAAGACGTGATCCCGTATGATGCAG
ATATGGACATACGTATCCACAtcgatgattttgaaaaactctaTCCGTTA
CGTCAACGTAAGTTCGTGTGGGACGCGTATGATGATTACGAATcgcattt
ttattttacgaaggATTGGCGATTGCCGTACGATTTACGGCGTCGGTATA
CGTGTAAAGGGAAGAAGGTTCATGAGTATGAAGGACAATGCTCATTTACG
GACCCGAACGCACGTATGATTTACCGTCAATGGCATATGGACTTATACGC
ATACACAACGTATACTGACGTCGTCAAATTTTTGCCACGCGACGCCGCGT
ACGAGTACCGTAAGGAAGATATTCTACCGATCACTAAATGTATGTTTATG
GAAATTGAAACACGATGTCCACAAAATCCGACGGCCATTTTTAAAAGACT
TTACGGTAGTTCAAGACCTTTGCCTACCAAGAAATGTGTAAACAAAAAGT
ACGTTAGAGTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020938-exon-sc0000374-1491911889:147516..147538 | TCONS_00020938-exon-sc0000374-1491911889:147516..147538 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1510915933:147516..147538 | TCONS_00020938-exon-sc0000374-1510915933:147516..147538 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1575043694:147516..147538 | TCONS_00020938-exon-sc0000374-1575043694:147516..147538 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1491911889:149774..149958 | TCONS_00020938-exon-sc0000374-1491911889:149774..149958 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1510915933:149774..149958 | TCONS_00020938-exon-sc0000374-1510915933:149774..149958 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1575043694:149774..149958 | TCONS_00020938-exon-sc0000374-1575043694:149774..149958 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1491911889:159026..161872 | TCONS_00020938-exon-sc0000374-1491911889:159026..161872 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1510915933:159026..161872 | TCONS_00020938-exon-sc0000374-1510915933:159026..161872 | Clytia hemisphaerica | exon |
| TCONS_00020938-exon-sc0000374-1575043694:159026..161872 | TCONS_00020938-exon-sc0000374-1575043694:159026..161872 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000374 | supercontig | sc0000374:147516..161872 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007074 | LicD_fam |
Blast
The following BLAST results are available for this feature:
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