TCONS_00020937 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020937
Unique NameTCONS_00020937
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3007

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020937 ID=TCONS_00020937|Name=TCONS_00020937|organism=Clytia hemisphaerica|type=transcript|length=3007bp
attcaagaaatctcAGATATCTACATTGATAATAATTGAAtcgtttttga
aaagaaatggcTTATGAAAACGAAATGAAAGCATCAAGAACGCTCAAGTT
CGTATCACATCTTGGACATCAAACGCGAATCAGGCCCCCAAAATCATACA
ACCGTGGCTGATTTAGAAGTATGGGAATATACGGCGGAATCTAACAGAAC
AACCAAGGATGGCGACACAAATGACTCAAGGGGTAATTCTACTCCTGGTT
TGTTTCACACTGGCCAATGTTTATTACTTCATACAAAACTACAGCCAGAA
TACGTATTTCCAAGAGGTTAGAAGGACTTTGACCATcgtcaaaaataaag
aagagaACGTCGATGTTACTAACACGGCGAAATCAAGTTCCGGTGGGTTG
ACTCAAGTTAATGAGATATTGAAACGTTTACAAACTTTGGAAACGAAGCG
AAATGTAGACATGGCcaataaaacaaaaactgtTTTGGATGGACTGATGG
GTAAGTTCTGGCCAAACGGTCAACAGGCTAGTGTGGCTGACGAAGCTGAA
AATCTGAAATGGTTAAATCGTACGAATGCGAAAGGCTTCGCGGAATACGG
CGACGGTACGTGTCCCGTCACAACAGATCGTCCACCGTGGCAAAAATTAC
TTCGCGAATGGGTAAAAATCGCTAAGAAGTATAAAATCCGTTATTTCTTA
TCTGCCGGTTCGTTACTCGGGGCGTGGCGTGCGGAAGACGTGATCCCGTA
TGATGCAGATATGGACATACGTATCCACAtcgatgattttgaaaaactct
aTCCGTTACGTCAACGTAAGTTCGTGTGGGACGCGTATGATGATTACGAA
TcgcatttttattttacgaaggATTGGCGATTGCCGTACGATTTACGGCG
TCGGTATACGTGTAAAGGGAAGAAGGTTCATGAGTATGAAGGACAATGCT
CATTTACGGACCCGAACGCACGTATGATTTACCGTCAATGGCATATGGAC
TTATACGCATACACAACGTATACTGACGTCGTCAAATTTTTGCCACGCGA
CGCCGCGTACGAGTACCGTAAGGAAGATATTCTACCGATCACTAAATGTA
TGTTTATGGAAATTGAAACACGATGTCCACAAAATCCGACGGCCATTTTT
AAAAGACTTTACGGTAGTTCAAGACCTTTGCCTACCAAGAAATGTGTAAA
CAAAAAGTACGTTAGAGTCTAGATTTAGAGCATCATGAATTTAAGCGTTC
TGACATTTGCGTTTTgtaatagggggggggggttcaactTTTTCAGTGTA
TGTTTTTAGTTAGCCATAAGATAGCATTTTGAAGCTTCTGTCTTGTTTAT
CtcaatattttatctttttttaacattatatTCTTTACTCGCGCTATCAT
TTGGGAATTTTTCCTCACCATGACCTTTTTAGGGAAATTCAAGTTTAcaa
acactgggcgaaataagagatatcttgaaaatatgatatttccaattact
tttgtaaatatggaaatatgacttttctatatttccaaagttgaggaaat
atcatatttcatgatatttccaaatctgaaacatcaaattttcaaaatat
gatgtttcaacaatgaatttcagaaaagtcatatttccatcaaggtcaaa
ttttatcaatgaatacacatacacgttttttataagactaTCCAAGATTT
TGAAGCCTGcggatgttcttaagtttttgagttttaagcctagaaaTGAT
CTTAAAGAGTTCTTATTTTCTCACTATTTTGTTGGTATATTtctccattt
tcctaagaaattggatgttttagagtccacaaacatataaaaaaaacgtg
taagctaacgaaattttgtacaaaatttcgaatgtttttttcaaataatt
atcAATAAGATTCTATTATCATGAAACTTTGAACCTATCTCGTTAAGTTG
acaaagttcttataaaattagtGTAATGATATcttataaaatttacaaaa
acaacaacaatttatgaaaaataacaattacATTTGGAGACGCTTATGCA
TCATGTTATAACTTGCAATACCAAAATATCTTTGatgcaaaatatttgtt
taaggTGAAACGATCCTCCTTCGAAAAAGCCACTAAGGATTTCTTAATTC
TAAAAAAATAGGGTGTCAGATATGAAATATATCAATATTGCCCTAAAACA
GAGTACAGGACAACAGCAGATAGGACATAGACAACAGGACATAAAGTTAG
AGGACTTGAATAATTAGAAGTTCCCCTTTAATTATGTCTTCTCCTTCAAG
AGTATTCGCTGGTCTTCGCCAGCGATCAATAACCTCCTTTGCTTCGACTT
TGATTTTGCCTTGTTTGACGTCATTGTCGAGAAAGGCGAGGTCGGTCACG
TGTCTACTTTCAATACATGAATCCACGTGTCGATGTGCGATAATGATGTG
ACCACCTGGTTTCACATATCGTATAATGTCCGTCAAGCATTCGTACCCAG
GGTGTGATGCTGAACAAAACAAAACACCTGATGAACAAACAACGTCATAT
TCTTGAGACGGGATGACAGAATCATCGTCTCCACTTTTCAGTTGATAGAA
TTTCTGCATTTTTCCTTTCGATCGAGCAACATCAATGATTTCTTTGCACG
GATCTAACCCATCAATATTTTGATAACCATGTTCAGAAAGAAGATCAGAG
GTTGCGCCTGTACCACATCCATAGTCAAGGATCTTGATATTTTTCTCATT
CGAATACAACTTCAGGATTTTTGTAGCCACAGCTTTAGGGCCAGAATATT
CTTCCTCAGAAGCCCACTCATCGTACGTTTTTGCGTATTTACTGTAAAGT
TCTTGTTGCTTGGCAAACTCTTCACTCGTATCTTCACGTACATCGATGAA
ATATGACCATGCTACACTGGAAAAGTTTTCCGCTTGTTGTGTTACTGCAG
CCATCCTTTTTTAGGTATGTTATGTCTGCACAACTCTCTCTGCAGAAAAT
GACACTT
Run BLAST on NCBI

transcript from alignment at sc0000374:147379..161872+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020937 ID=TCONS_00020937|Name=TCONS_00020937|organism=Clytia hemisphaerica|type=transcript|length=14494bp|location=Sequence derived from alignment at sc0000374:147379..161872+ (Clytia hemisphaerica)
attcaagaaatctcAGATATCTACATTGATAATAATTGAAtcgtttttga
aaagaaatggcTTATGAAAACGAAATGAAAGCATCAAGAACGCTCAAGTT
CGTATCACATCTTGGACATCAAACGCGAATCAGGCCCCCAAAATCATACA
ACCGTGGCTGGTAGGtttctttatttattttattagctattttatccctt
tttttctatgaaatgtTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCTCTACA
CTAACTGCAAAGGAAAACGTCTGGTTGGTGGTGCGAGGGGATGCTAGTTT
CCCCTCACTTATGAAATTAACCTTGATTGACTGTATTTGCTTTACCAATC
AATTGATTCAACTTTTGATCCATTCTATTGAAACTGTCTGCAATTAGCTA
GCAAAAagatcaatttctgaaaaagatcaatttctgaaaaataacTCCTT
TTTCAGTatatttcataatattttttcaggaaaaatgtCCTGTAAGATTA
TTTTTAATGGGTGGTTTCTATAAACCTATTCACATCCAGGCTGGAAATGG
TGCACAGTACGCCAAATATATTTGGAGTGAGGCAGTAATTACTTTTGGCA
TATTGGCGTAAGGAGCGGATATAAAGTAAGATATTGGCGTAGGCATTTCA
AGACGAGAGAAGCACCCCCATTTTAACGCCTGATTTCATGACGCCAGGTT
TAAGCCGCTCCATCGACCGCCATATAAGGACGTAGAGCGTAAATAGAATA
TAAAGCTTATGAGCAACTTTTAGGGGTGAGAAAGCAAATATCCCTGGACC
CGTTAAGGGGGGCTTACAGCAccttaaccccccccccctctgcAATTTCG
CTCTTCCGCAAGCAGAACTTTTTTTGGCGTAGACCTCAGTTTTAACAAAT
AACAATTCGGTATGGACTTTGCATTATTTCCACACTGGAAAACGTGTAAG
CATCAATAATGGCTACGTATGAATGAAGAACAATCTTTACTTGAAACTTA
TTTTAGGCCACGCTTTAATCAAAAAGGCATTTTGTACCTTTGGAATACGT
TTaactagcctagaaatctaagctactTTGATTTAGTCAACTAGGATAAA
TTTGATGGTAACTGAATAACTAGTACAGTAACAATATTCCAAGGCAAGtt
ttaaaatccgtaaatataaaaaatcttttaagcgccgaaaacgctatatt
tcCATTATccccgtgtgtcctagccttgtgaatacgggtttagttaacta
ggctaacaTTTAGCTACCTATTATCTCGTAACTGCAAtagtagactagta
aaccacgtcgttgtatttcgctgcagattaaacttgtAATGGGATCTATT
TTTATATGTTCACTTTCTTTCCAAACCACTCttccgcggcaatttctatt
ttttgttagaactctttattataagcactattcccacGTTCATGTGTCCA
AGGAAAgtcagacgcttgctagtctactgCAATAGATACACTCAATGATT
GTGAAGAGATTTTTATGAATCCATCCATCCCTTTTCTTACATTAGGAAAG
ATACAACCTTTGCAGGTAAATGTTTCACGGTGGTTACCATTTGACAATGG
AAGGCTACTTACACTCACTACTTACGAAGAAATACCAGCCAGCTCATTGG
TTCGAAATGCCTTTAGATTGCACCACCCAACGTGATGGCTTTCACCGTAC
CGAAGAAATTTGCAATTGACACGTGAAAAGGTACAATCTTCCacacccca
gctggcacacaacgttgtttcaacgttcatctaacgttatatggtggatg
ttgtgaacgttagataaacgttgaaacaacgttgtgtacgaTCTTCACAC
TCATTGGAAAATTTATACTTGCCGTAGACGATCCTATCCTAAGGTCAATA
AAAGTGGGATAATTATTAGGAGTATGGATTAATTTGATAACAGAGGTGAG
CTCGGCACGGAGTAAAcagttgtctgtacacagacccagtgtctacggct
tatttcaaaattcattacctgtagttgtcattgtcttttctcatttgaga
tttttcaaactgaccgctgctacactctggtacagaatAGTTAAAACAGT
GATGGGTGTGTTTGCAGTGTTTGCTGGAAACTCTGCCGTTTTTCCTTCTT
CTGTCCATGGCAGTAAACTTCGCGCTAATATATTTTCCCACGTTTTCTAC
CCCTACAAAGGATGATAGCATCTTTTATACTCTTGAatgactactttagg
cgtacaaactttcgcgagcagaaaatTTCGCCAGGTTTAAAAATGGCGAA
ATCTACGAAAATCGTGGTTtgtgctcgcgaaagtttctacgccaAAAGTA
ATATACGGGAATATCCCGGAAGTGTTAGCAGACTAGATTAAACtacattt
tttatgagaataaagCTTGAGAAGATAAGGGCTCGATgccaaaatttgag
aatatttaaaaaatttttaaggctttgatcACTTAATactaaaattaaga
acatttcattttaaaacagGCTTAAAACccataaaagtaataattacaaa
aaagatttttaaaacgtGTGTGACGTTTGAAAGACTTAAGATGTCAGGcc
gattaaaaaagttttcacagcaaaaatttaatggttcttatataaaaaag
gtgtatttgatGTCAGGCTGTCAGATTATCTCGTGTTCGTATTACATTTC
TTTTGGTTTTGTTGACCATATTAAAGTTTGTTATCTTTTCTGAGGGTTTT
TATAAGTTGAAAAGCGTGTACAAAGATttgaatgactttttttttaatat
acttTGATGTAGCAAAGATTGTATTGGTAGATAAGTCAAGAgaatttata
attgaaggttgatGTACTGTACTTTTTAGATTCTGTTTTGGTTGTATGGG
CAAATTAAAtaggcttttttataagaatacactttataagaatgtccatg
atgaaaatggccagaAATATCATAAGAACATAATAAGAATAAGAATATTT
CATGAATATATTTCTGCTTTTataattttctatttcatttaCTTTGTACT
TTACATAGCTGTTTAGTACATTGtgtttattcttttgtttttacgATGAT
TTTGAGACTATGACGATGATGATTTcgaccaaaaagttaagaatatccat
gatgaaatggagttacaccattctttaaaaaaagcgtgtatgggaataaa
aatagaaagaacctttttaaaaaatttcagtagCACAGCCGAAGGATTTT
TCatatgcgagttacgagttacgagttaaagttgcatttagaaccacgag
ttgCGGGTTACTTtgtacgagttacgagttacgagttgcattttaacaaa
ataaaatccagGAGTAAAACNTATTTCTTTTGGTTTTGTTGACCATATTA
AAGTTTGTTATCTTTTCTGagggtttttttataagttgaAAAGCGTGTAC
AAAGATTtgaatgacttttttttaatatactTTGATGTAGCAAAGATTGT
ATTGGTAGATAAGTCAAGAgaatttataattgaaggttgatGTACTGTAC
TTTTTAGATTCTGTTTTGGTTGTATGGGCAAATTAAAtaggcttttttat
aagaatacactttataagaatgtccatgatgaaaatggccagaAATATCA
TAAGAACATAATAAGAATAAGAATATTTCATGAATATATTTCTGCTTTTa
taattttctatttcatttaCTTTGTACTTTACATAGCTGTTTAGTACATT
GtgtttattcttttgtttttacgATGATTTTGAGACTATGACGATGATGA
TTTcgaccaaaaagttaagaatatccatgatgaaatggagttacaccatt
ctttaaaaaaagcgtgtatgggaataaaaatagaaagaacctttttaaaa
aatttcagtagCACAGCCGAAGGATTTTTCatatgcgagttacgagttac
gagttaaagttgcatttagaaccacgagttgCGGGTTACTTtgtacgagt
tacgagttacgagttgcattttaacaaaataaaatccagGAGTAAAACGT
ATCCAGGGAAACTTTGGAAAAGTTGCTTATGTTGGGTGTCTGATATACac
gtattttttttataagaatattcaaaatttttgaagtcttcggatgttct
taaccttgtgagatttaagcctaaaaatgtttttagcatattcttatttt
tcccattttgtgagtatttaaAGTAGGGGGCAGAATGTTTTAAAAGGTCC
TTTTTCTCGATCCAAGGTCGTAGCGAAGTTGAGAAGCTTAGCTTATGTTT
CCTCTTTTTCATTATTCAAAGAACTACTATGTTTAAATTCTTTGTGtaat
cattttcatttatttgttgttttttttaagaggaATTTTTTCCCTATGAG
GGAAAAGGTGTTATGAATGTTATGTTGAATGGGAAATTATTGTAAGTTTG
TAATGATGAGAGTTTCGTGGGTTTTCTCGAAAACTTTTCCCCTGTTAGGG
AATGAATGTATGTAAGTGTAAGATTATAACGATAACTTTTTCAGAAGagt
aaaaaagaaacaaactttGTGAAGAAGAAACATTCTTAAATCTTGCTTCC
ATTCAGCTGCTTCCTTTTAAACGTCCTCATACTGATAAGTTTTTCTCAAT
CTACCTTCGAGacattttttctgaaatttttgtaATTGTGGATGGACCAT
TTGAtgtgttttttcgaaaatcagtcTATAGTCCTGTCTAGTCGCTAGCC
TGTTATTTACGTTTAAAAAACAGTAACAAACATGGTTTATAAACATTCTT
AACCAGTCTTAACATGTACGGAACTTTTAGTAAACTTAAAACTCTGCATG
ATTTAAGAAAGTTTTAATTTAACAGAATATTCGTGCTATAGCTTGACgag
tttgaaatgttttcataAACGGTGATCCGACGGTGAATGAAGAAAATGTT
TGTTGTAAATGTCTCAATGTCTGGCAATGACTTTTCAGACGTAGTTTCgc
catttttttcgaaatacaGTAGTTATATTGTTTTTTGGACTAGATAATTT
TACGAGAAATAACAATGGTATAAAAGAAGcccccaagcggttttcgtgat
gacgtGATCTAGGGACTTTTTTGCAGTGTGGTTACGtgatttgaaaattc
tttcttcgtgattgcgtgataaGAGGTCAATATTcgtgatacgtgatttg
gactttttcaaagggatgcgtgattatccattttttttgctgatttgcgt
gatcgtgattgaagacaaaaaattgtgtGATATCGTGATCAAGAGTTACC
GCTGGGCTCCCCCCCCCTCATGATTAATTTTCTTTAATTATTAATTTAGg
cgagaaaaatttaatttattgttctacgggaAGACCCCCAGAAAAATATG
GGTTGGTcggtataataaaaataaatttcttaaaatctagtGTCGGAAtg
tcaaaatctaaaaaaattctTACGTTTTGAAGCAGTAAACTTTCTCCTCT
TTATCGATGAGCGACTTTCGTGACATTTTAATTGGGATATTTTAAATTCA
TCTAACTTGTGGGATGAATTTACACtttttcaacttgttcagtCAAAAAT
ATCTGCAAAAAACTTATCAAGTCCCGTCCTCTAACTTTGCAAATTCAATG
TTATTATTCTTtcgattttgaaaataaaaacagggTCGGTCGGAcctgta
gaacaataaattaatttggtctcgccttatCTTTAAGGAGGCctccccag
cggacccaaaattcatgccaccacgccaatttttttttcgatttcgcgcc
atcacgcctgaaaaattcgATTTTCCCATGTTCATGATTTTCCCGATCAC
GCCAAGTTTTTCGATTTCATGCCATTACcactagaaaatttagttttcac
gctcatattcTCTGGATACACTCAGTTTTAGACCGCGTTTAGACACATTG
GTATGGATAAAATGCCGttatataaacttaatttttacccacaaatataa
tttatataatttttcctatcggaaacacccgaaaaatctggaaggaattt
gacctctgtttttctatttttagtaatacacaggggtcaaattcgggtgt
ttccgataggaaaaatgacgtaatcttgacttatgcatatcaataattgt
tggacaactggtcacatcaaagggcaccggtttgagggctgaggtatatt
tgagtaaattgactaagcccaccatggttgggcaacggagaaaatttctg
aattttgaagggttattttatttatttcaattcaatttgaaaaatgattc
atgtaaaaataatggaaatcttttaaaagtacaagcaacttttttggtaa
aaacatgagGGGTCATGCCTCCCTAATCCCCCCGTTGACGGGacccatgg
gcattaattgtgaattagcatgaatagttttcaaaaggggaacgaggagg
cTCCACCCTGGTTGGCGTCGACGGGAgacattttcaatttagtatggcta
aaatcgctctcatttactctctttttttccaaaatatggtataaacatca
caggattcctttgatcaataccaatctgctcaaaattacacctcaaaata
aacctgttgcttctttctgtttgaggctttgctataaatatatatatttt
cctgaaataaagtaCCTGATGTCTTTGATGCATCTAATGAATAAGCAATA
AGAGATTTTCGACCCTCTCATTGCAttcaactttattttgaagactagct
agcaactgctaaagacaattggaagttacaaggataaatggcagatgaat
aaaaCTGTTTGGACCGTTTCTTTTATGCTTTTAAATGAGATCTGTAGGAG
GCTCCGCCATATTTGGACATAAGttcataattttgaaatttagaccctct
aaattggctaaaatggacatagaattacgtttcaagtaataaatataatt
ttcacgatcacgctgaactgcaaatttcacgccatcacgcctaaaaaaac
tcaatttcacgatcacgccggcacttcatttttaCGCCATtacgccgttt
ttttcaaaatttcacaccatcacgccacgaaaaccctccatcacgccatc
aagccaaccgctggggggcgcctctttaagttatcaaaaattatcaagaa
CTGAAAATCTTGAGTGTTCTTTGgaaacaaaagttgaaaactCAATTGTT
CTTATACAACATCTTCTGAgtatttttcctaaaaaaaactCTGAATCtgc
aaagcctcaaaatgttcttaacttgtgcTTAATATATTTTGTCCACCGAA
GTCTTATGTCCTTATactgtatagtttgttcttataaaaaaaacgtgtat
ctacCAATTTGATTTGCCTAAGGGGGTAGTTTCTCATATACTTCTTACAA
GAAAAtccaatatttttgaagccttcgagtttaaagcctgaaaatgttct
taaaatgttcttactagAGTTtggaaagccttaaaatggtctTAACTTAT
TCGTAAAATTTTAAGCATGGAAacctaatgttcttatatagtttgttcta
ggACATTCTAGAGTACGatacagatgagatggagtttttataagatactt
taataattggtcatttgaagtaataaaattgacccgatttttagaaaaag
gtTGACGTCACTGGTTGACGACCGACCAAATCAAAAAGAGCTTTTAAAAC
TCCATCCCGTCCCGTAGGGTATCGTGAAACGAAACTAAATGGGAAAGTAT
ATGGAGGGGAAGAAAGGTCCTATTCCGAAGAGTATACCATTTCCCCCAGA
AAGCCTCTTCTACACTTTACAGATCATCTAAATAATGACGcaatgtttcg
agctccaaccctgaccctaactgataatttcgaaataatcaaaaatcgaa
aatatcgaaaaggtCAAAAAGGAAGAATAAGAAAAGTCCAATTTTGATTC
ATTCCTaattgtttatcacgggaattaactacagggtgtccctaattaaa
gtatcgagtttgaactagacgatgttatcgtccgttacagtgatagtaaa
ggcgggaaaaaatggcggtatggcgttatggcggtatacggaaaaaaatc
ggcgggggAGTTTNNNNtttgttttgattttttcgaataccGAACACAGT
TGGCCTCGCATACGGAAACTCGAATACGTACGATTTgggctgtttttgta
ttttgtgccAAAATCGTATAGTCTAAGACTAGCAACTCTACCgaactgta
aactcttttcgtcaaaaaaacccgtttgcgaattttcttcggctttgggc
ttttttctttgatagtgattcgtcttagactataaaatagtctaagtttg
aacatgcgattgagtagaaaagtgttatgtgcgtgttcacaaaattgtat
tttaagctctccctcttttttctttgtcattacgattaatttatacgttg
taactaccttttgtaataagcctgtgtgatgNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNga
tggagaacgttcttatattttagcgataacacacacaaacttttctactc
aatcgcatgttcaaactcgatactttaattagggacaccctgtacatgtg
gtctaaaagaacgacaaattacgcatgcgtgttaatGCAGAAGTCTGATT
TTTTAACTCTTCGGAATGGGACCTTTCTCtgaccatggaggtaataaaaa
tatagatggagtaACAACTTTTTATGTAATAGCCAGATAAGTCATAAAAc
tctttgaaatttatttcaaatcggcctcctttgattaccaatccttgata
gcaaaaatcagtcaagatatagattataagaactaaagtaaagttattct
gTCCAACGAAACCTCGTATTTTTAGGGAAAATGCGAttttttttcgagta
ataatttctttatagttttaaaagaagttttcattttatcgggaaacttt
cgagaggtaaacttcttcaaattttgcgaattctttgttgtttgtggaag
gttctttgctataaatatctttagatctaaaatagcagctgcctcaaaat
tttgatagaatatagttgaaagattggcattagtaaatatgtaaaaattg
acaaaatttggcGAGGATTCCCTGAGAAGcgaacatttcaaattcgatgt
tctgtgcttattcttgcaagtttttcttatgttttataaacaaaactgtc
atcacacaacgaacaaattaaaaatgtagcgtgatgttattcaaattctc
ttcgactgaagtattcccatgagcgaaagcaaaattaatggctttttccc
aaagcaataaagcaacagtttgctatcaacggtacaatacaatagaatag
taggagtgttatctccatctatatttttattacctccatgcaCTGACTGC
ATGCGACGTTtaattgatgatattttttgacaaaggaaattaaaaatgcc
ttaaCTTACTGCCATTAGTCAATTAATAATGTTGAGTCtcataagaaaaa
aacgtaaaaaatgtaatgtatttttattaaaaaaacacgAGTCTTCGGGG
ccaaaaaactgattatgaAGGCTGTTATTTCAATTACAATAAATTAAAAT
GCAATTACACTAAAACACtcttaaaacttaaaataagaacattttaaggt
tctttttaggcttcaaagtaagaaaaaaataagaacattatcCGAAGTCT
TCAAAATTTGTAGACGTTCTTATAACAAAATCCGTGtaataaattttcta
aaatttctttaattaaTTCTATCATCATCATGTGCGATTAAGTTGTCGCA
AATTACCCATTaaattgggacaagctggagtttttacaagctcttatatg
atttggttggtcgttaagttaatttcattactttttctaaagaatgcgtc
atctctattacttcaaatgaccaattagtgaagtatcttataaaaactcc
agctcgtCCCATTAAATTTCCAGTTTTTCATGACATAaacgcaaaaaaaa
caaaatattgcaAATGTTGCAAAAAACAGTTTCTAAGTAAACTAAGCTGT
ATATCGTAGCCAAagcttaaattcattttttctattCATTCATCTTATTT
ATTATCCGATTCTTTTTGAGATCTCATTTAAGGTTTTTCGTGATGTCGTG
ATCGATGAAGGAAGCATTAGTTGCATGATATAATGTAATCTACAAgtatt
caaaactttttgtaaTGTCTCTCTCTAGAAGAAACTTGTTGAGCAGTGTT
TTGataccgtgagatcaggtaacttgcatcattggagggaaacttgcata
gccatcaaatgactgaccaatcaaagcagcaaaatttcaaagcaaatgaa
ctacgcagcttcgctcacagctctactctactatttttgttttgatttaa
ctttgtattttaatgaccagccaggtcattcatttgagggctatgcatgt
tagcctccattgatgcaagttacccgatctcacggtatatcaCGGCTTGC
ACTTTTGGTTTTTGGTAAAACGCATTTTAAAGAGAGAATGATCTAAATAT
CTAACTGTAAAAAGAACAAGCGGATGCTCCTCAGATAGAAAATAGGCTTA
TAATAGAAAGTCAcagatttcaaactttcagccaAACTCTATCAGGTTCT
GGTGTCATGAAATAAGTGTATtagtatattttttgttttcatttcagATT
TAGAAGTATGGGAATATACGGCGGAATCTAACAGAACAACCAAGGATGGC
GACACAAATGACTCAAGGGGTAATTCTACTCCTGGTTTGTTTCACACTGG
CCAATGTTTATTACTTCATACAAAACTACAGCCAGAATACGTATTTCCAA
GAGGTTAGAAGGACTTTGACCATcgtcaaaaataaagaagagaACGTCGA
TGTTACTAACACGGCGAAATCAAGTTCCGGTGGGTTGACTCAAGTTAATG
AGATATTGAAACGTTTACAAACTTTGGAAACGAAGCGAAATGTAGACATG
GCcaataaaacaaaaactgtTTTGGATGGACTGATGGGTAAGTTCTGGCC
AAACGGTCAACAGGCTAGTGTGGCTGACGAAGCTGAAAATCTGAAATGGT
TAAATCGTACGAATGCGAAAGGCTTCGCGGAATACGGCGACGGTACGTGT
CCCGTCACAACAGATCGTCCACCGTGGCAAAAATTACTTCGCGAATGGGT
AAAAATCGCTAAGAAGTATAAAATCCGTTATTTCTTATCTGCCGGTTCGT
TACTCGGGGCGTGGCGTGCGGAAGACGTGATCCCGTATGATGCAGATATG
GACATACGTATCCACAtcgatgattttgaaaaactctaTCCGTTACGTCA
ACGTAAGTTCGTGTGGGACGCGTATGATGATTACGAATcgcatttttatt
ttacgaaggATTGGCGATTGCCGTACGATTTACGGCGTCGGTATACGTGT
AAAGGGAAGAAGGTTCATGAGTATGAAGGACAATGCTCATTTACGGACCC
GAACGCACGTATGATTTACCGTCAATGGCATATGGACTTATACGCATACA
CAACGTATACTGACGTCGTCAAATTTTTGCCACGCGACGCCGCGTACGAG
TACCGTAAGGAAGATATTCTACCGATCACTAAATGTATGTTTATGGAAAT
TGAAACACGATGTCCACAAAATCCGACGGCCATTTTTAAAAGACTTTACG
GTAGTTCAAGACCTTTGCCTACCAAGAAATGTGTAAACAAAAAGTACGTT
AGAGTCTAGATTTAGAGCATCATGAATTTAAGCGTTCTGACATTTGCGTT
TTgtaatagggggggggggttcaactTTTTCAGTGTATGTTTTTAGTTAG
CCATAAGATAGCATTTTGAAGCTTCTGTCTTGTTTATCtcaatattttat
ctttttttaacattatatTCTTTACTCGCGCTATCATTTGGGAATTTTTC
CTCACCATGACCTTTTTAGGGAAATTCAAGTTTAcaaacactgggcgaaa
taagagatatcttgaaaatatgatatttccaattacttttgtaaatatgg
aaatatgacttttctatatttccaaagttgaggaaatatcatatttcatg
atatttccaaatctgaaacatcaaattttcaaaatatgatgtttcaacaa
tgaatttcagaaaagtcatatttccatcaaggtcaaattttatcaatgaa
tacacatacacgttttttataagactaTCCAAGATTTTGAAGCCTGcgga
tgttcttaagtttttgagttttaagcctagaaaTGATCTTAAAGAGTTCT
TATTTTCTCACTATTTTGTTGGTATATTtctccattttcctaagaaattg
gatgttttagagtccacaaacatataaaaaaaacgtgtaagctaacgaaa
ttttgtacaaaatttcgaatgtttttttcaaataattatcAATAAGATTC
TATTATCATGAAACTTTGAACCTATCTCGTTAAGTTGacaaagttcttat
aaaattagtGTAATGATATcttataaaatttacaaaaacaacaacaattt
atgaaaaataacaattacATTTGGAGACGCTTATGCATCATGTTATAACT
TGCAATACCAAAATATCTTTGatgcaaaatatttgtttaaggTGAAACGA
TCCTCCTTCGAAAAAGCCACTAAGGATTTCTTAATTCTAAAAAAATAGGG
TGTCAGATATGAAATATATCAATATTGCCCTAAAACAGAGTACAGGACAA
CAGCAGATAGGACATAGACAACAGGACATAAAGTTAGAGGACTTGAATAA
TTAGAAGTTCCCCTTTAATTATGTCTTCTCCTTCAAGAGTATTCGCTGGT
CTTCGCCAGCGATCAATAACCTCCTTTGCTTCGACTTTGATTTTGCCTTG
TTTGACGTCATTGTCGAGAAAGGCGAGGTCGGTCACGTGTCTACTTTCAA
TACATGAATCCACGTGTCGATGTGCGATAATGATGTGACCACCTGGTTTC
ACATATCGTATAATGTCCGTCAAGCATTCGTACCCAGGGTGTGATGCTGA
ACAAAACAAAACACCTGATGAACAAACAACGTCATATTCTTGAGACGGGA
TGACAGAATCATCGTCTCCACTTTTCAGTTGATAGAATTTCTGCATTTTT
CCTTTCGATCGAGCAACATCAATGATTTCTTTGCACGGATCTAACCCATC
AATATTTTGATAACCATGTTCAGAAAGAAGATCAGAGGTTGCGCCTGTAC
CACATCCATAGTCAAGGATCTTGATATTTTTCTCATTCGAATACAACTTC
AGGATTTTTGTAGCCACAGCTTTAGGGCCAGAATATTCTTCCTCAGAAGC
CCACTCATCGTACGTTTTTGCGTATTTACTGTAAAGTTCTTGTTGCTTGG
CAAACTCTTCACTCGTATCTTCACGTACATCGATGAAATATGACCATGCT
ACACTGGAAAAGTTTTCCGCTTGTTGTGTTACTGCAGCCATCCTTTTTTA
GGTATGTTATGTCTGCACAACTCTCTCTGCAGAAAATGACACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011742XLOC_011742Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020937-exon-sc0000374-1491911889:147379..147538TCONS_00020937-exon-sc0000374-1491911889:147379..147538Clytia hemisphaericaexon
TCONS_00020937-exon-sc0000374-1510915933:147379..147538TCONS_00020937-exon-sc0000374-1510915933:147379..147538Clytia hemisphaericaexon
TCONS_00020937-exon-sc0000374-1575043694:147379..147538TCONS_00020937-exon-sc0000374-1575043694:147379..147538Clytia hemisphaericaexon
TCONS_00020937-exon-sc0000374-1491911889:159026..161872TCONS_00020937-exon-sc0000374-1491911889:159026..161872Clytia hemisphaericaexon
TCONS_00020937-exon-sc0000374-1510915933:159026..161872TCONS_00020937-exon-sc0000374-1510915933:159026..161872Clytia hemisphaericaexon
TCONS_00020937-exon-sc0000374-1575043694:159026..161872TCONS_00020937-exon-sc0000374-1575043694:159026..161872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000374supercontigsc0000374:147379..161872 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.39254e-08	0	0	0.715821	0.702476	4.22923	6.00483	6.99162	0.27532	0.532071	0	0	0	0	9.42643e-11	9.16342e-10	0.34711	0.375389	0	0	2.10975	1.42746	0	3.18512e-05	8.0243	5.53323	1.06166e-08	0.778721	4.69867e-07	3.33055e-10
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020937 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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