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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020759 ID=TCONS_00020759|Name=TCONS_00020759|organism=Clytia hemisphaerica|type=transcript|length=441bp
ggtacttaTGGAAGAGCCAGGAAAGattttgtaatgaaatccaAAACAGG
GCGATATCAAATCCATAAAGATGATTTACTATGTACTTTCGTTTACGCCA
TTCATCGAGATGAAGAAGTTTTTGAGGAtcctttcaaattgaaaatgacC
CGTGATAGGAAGATTATCGAGAATCAAAATGTGTGTTTTGGGTCTCCTCT
TGTCATGGAACCTACAGCCAACAATCATAAATGTCCAGCTGCTAGAGTTA
TGATCAATGTATTGAAAATGTTTCTGGCACATTTCACTAGATGTGATGTA
AACATTACGTCAGATGTCACGTGCTCTTACACAAGCTCAGAAAGATTGGC
ATGCACCGATGAGCCTCTTGTTGTTGAAAAGTTCGTGTACAAAGAATAGA
CGTACAAGTTTTCTTATAGAAACatTCATAATCaatgaagc Run BLAST on NCBI protein sequence of TCONS_00020759-protein >TCONS_00020759-protein ID=TCONS_00020759-protein|Name=TCONS_00020759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=132bp
GTYGRARKDFVMKSKTGRYQIHKDDLLCTFVYAIHRDEEVFEDPFKLKMT
RDRKIIENQNVCFGSPLVMEPTANNHKCPAARVMINVLKMFLAHFTRCDV
NITSDVTCSYTSSERLACTDEPLVVEKFVYKE Run BLAST on NCBI transcript from alignment at sc0000370:14979..16263+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020759 ID=TCONS_00020759|Name=TCONS_00020759|organism=Clytia hemisphaerica|type=transcript|length=1285bp|location=Sequence derived from alignment at sc0000370:14979..16263+ (Clytia hemisphaerica)
ggtacttaTGGAAGAGCCAGGAAAGattttgtaatgaaatccaAAACAGG
GCGATATCAAATCCATAAAGATGATTTACTATGTACTTTCGTTTACGCCA
TTCATCGAGATGAAGAAGTTTTTGAGGAtcctttcaaattgaaaatgacC
CGTGATAGGAAGATTATCGAGAATCAAAATGTGTGTTTTGGGTCTCCTCT
TGTCATGGAACCTACAGCCAACAATCATAAATGTCCAGCTGCTAGAGTTA
TGATCAATGTATTGAAAATGTTTCTGGCACATTTCACTAGATGTGATGTA
AACATTACGTCAGATGTCACGTGCTCTTACACAAGCTCAGAAAGATTGGC
ATGCACCGATGAGCCTCTTGTTGTTGAAAAGTTCGTGTACAAAGAATAGA
CGTACAAGTTTTCTTATAGAAACATTCATAATCAATGAAGCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGTGTGTTTTGGGTCTCCTCTTGTCAT
GGAACCTACAGTCAACAATCATAAATGTCCAGCTGATAGAGTTATGATCA
AtgtattgaaaatgtttttggcacaTTTCACTAGATGTGATGTAAACATT
ACGTCAGATGTCACGTGCTCTTACACAAGCTCAGAAAGATTGGCATGCAC
CGATGAGCCTCTTGTTGTTGAAAAGTTCGTGTACAAAGAATAGacgtaca
agtttttttatagaaacatTCATAATCaatgaagc Coding sequence (CDS) from alignment at sc0000370:14979..16263+ >TCONS_00020759 ID=TCONS_00020759|Name=TCONS_00020759|organism=Clytia hemisphaerica|type=CDS|length=399bp|location=Sequence derived from alignment at sc0000370:14979..16263+ (Clytia hemisphaerica)
ggtacttaTGGAAGAGCCAGGAAAGattttgtaatgaaatccaAAACAGG
GCGATATCAAATCCATAAAGATGATTTACTATGTACTTTCGTTTACGCCA
TTCATCGAGATGAAGAAGTTTTTGAGGAtcctttcaaattgaaaatgacC
CGTGATAGGAAGATTATCGAGAATCAAAATGTGTGTTTTGGGTCTCCTCT
TGTCATGGAACCTACAGCCAACAATCATAAATGTCCAGCTGCTAGAGTTA
TGATCAATGTATTGAAAATGTTTCTGGCACATTTCACTAGATGTGATGTA
AACATTACGTCAGATGTCACGTGCTCTTACACAAGCTCAGAAAGATTGGC
ATGCACCGATGAGCCTCTTGTTGTTGAAAAGTTCGTGTACAAAGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020759-exon-sc0000370-1491911889:14979..15401 | TCONS_00020759-exon-sc0000370-1491911889:14979..15401 | Clytia hemisphaerica | exon |
| TCONS_00020759-exon-sc0000370-1510915933:14979..15401 | TCONS_00020759-exon-sc0000370-1510915933:14979..15401 | Clytia hemisphaerica | exon |
| TCONS_00020759-exon-sc0000370-1575043694:14979..15401 | TCONS_00020759-exon-sc0000370-1575043694:14979..15401 | Clytia hemisphaerica | exon |
| TCONS_00020759-exon-sc0000370-1491911889:16246..16263 | TCONS_00020759-exon-sc0000370-1491911889:16246..16263 | Clytia hemisphaerica | exon |
| TCONS_00020759-exon-sc0000370-1510915933:16246..16263 | TCONS_00020759-exon-sc0000370-1510915933:16246..16263 | Clytia hemisphaerica | exon |
| TCONS_00020759-exon-sc0000370-1575043694:16246..16263 | TCONS_00020759-exon-sc0000370-1575043694:16246..16263 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000370 | supercontig | sc0000370:14979..16263 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001128 | Cyt_P450 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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