TCONS_00020637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020637
Unique NameTCONS_00020637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020637 ID=TCONS_00020637|Name=TCONS_00020637|organism=Clytia hemisphaerica|type=transcript|length=2121bp
TTTTTGGCAAGCATGACGTAATGTCTTGTCCATCGCGTACTTTCcccttt
ctcaaattttcatggAATCACTGACAGTTGAGTATTTTTTTGTGGAAGGG
ATGAGTAACACTTTCTTTGAATGTTGCATTTTGATTTTCGTAATACTATC
ATTGCCCTACTGTTTCACCATGTCACAGTATCAACAAAATCCAGACTTCA
TTAAAGAAATCACAGGCATCAAAGATAAAAATGGAGAAAGACTTTATCAA
GTTGTTTGGAAACAAAACAGCTGGGTTCCAGAATCTCAACTCCGAAGTTG
TACAGAACAGATTGGAAAGTTTGAAGATAAAAATGTCGATACTGCTGCAA
ATGGTTTGAGTAATCTTCAGATTACTCCTCCTAAAAAGGTGGCCAAAGAA
GAAAAGGTGTGCTCTCCAAAACCAAAGGATGGAAAAGAGGAAAGAAAGCA
AGatgctGTTTTAAGACGCTTACCATCAACCACCTCTGACATCAAAAGAC
ACACAAGCGTTCTGGAAGGCATCAAAACATTAACTCCAGATTTTCTCAAA
GACGAAAATAAGAAGAAACTTATAGATGAAGCTTTGATGAAATTCAAAGA
GAAATATTGCAATCCACCAAAAAAGGACGACCTTAAAGCTGCAAAGGGAA
AGTTTGGTATTGTTTTGGAAGATTTGAAATTGTCtttcaaagaaaacttt
ttaacgtGTAAAAACACTGAGTACACTGGCTCAACATATGAAGGTTTAAA
GATCTCAGGAGATGGACTCGAATTTGACGTTATGTTTTTGTTCGAAGGTG
GAGAAGATCTAAAAGTTTTGCCAATAAAAGATGAAGTGGGCTTTGCACAT
TTAGCTTTAATTGATAAGGATATTGTGAAAGAAAATGCAATTACCAAATC
AGCTGATAAGGATGGTAAAATTCTGTCAAAAAAACTGAAAGACAAATTCA
AAGGGACAttacaaaatttcattaataaTTCTCCTCAATATAAAGAATTG
ATTACAATGAAGGAGCACGGTCCAGCTATTCAATttgatatcaaaagaaa
aaaggatGATAAAGACCTTTGGTATAGTGTTGATTTGTTACCCTCCTTTG
AAGTCAAAGTAAATGAAGAAAAACACATTTATGTACCAAAGAAAATTGGA
ACTGATCAAAATAGTTGGCGTAGATCATTTTCTAAGGAGGAGAAAGATCT
CCTTCGAAATATTGATTCGGGGAACGGAAACCGAAGAGAGGTTGCTCGca
cattaaaagcaatgatcaAAAAGGAATTAAAAAATATCCCATCGTATGCT
ATCAAAACAACTTTGCTTCATATATGTTACGGTGAATCAAAAATAGATGA
AGAGTTATGGGTACCCCAAGAGTATACAAATCGTGTTTTTGATATGCTTG
CATTACTTGAAGGCTACTTCAAAGAAAAATGGCTACCAAATTATTTTCTA
CCAACTCAGAATCTGCTTAAGAATATGAATGACANAAAATGGCTACCAAA
TTATTTCCTACCAACTCAGAATCTGCTTAAGAGTATGAATGACAGAAATT
TGGAGCAAGTTGAGAACCGTTTGAGAGGATTACGAATGAGTGACAAGAAG
TTTTTAAGTTTGACCAAAACCGATGGTGATCTGGTGTAGATACATTTTGA
TTCTAAATGAAAACTTTGAAGAGATTCATGGTTAAAGTATAATATCTAGC
TAGCCGTGTTTTTGTGTATGAGTCTCATTCTCAATCcaagtatttcaaaa
tattgtgaaCAAAATGTTTACTTCTAGATAAGGTCATGAGATAAAGGAAA
TGTGTTATTGGTCAATACCAGTCAGTttatttatatttgttttttatttt
caaagcttttaaTTTTGTAGATGTGGTTTGATACCATTTTAAATTGTTGC
AGCTGCCAAGCAGTAATTGCAATCAAAAGTACTagtgaatatttcaaaat
ttgtatttttaaaaaggtCGATTAAAAAGAATAGTAGTTGTTAGTTTGCT
ATTGCTTTCTtttcattatttatgacgtcataatttgaaaaaagttgaat
atctcaagaactaattctcgaaactttatgaaatttggaccaatgatcga
acttatcaagaggaggagaat
Run BLAST on NCBI

protein sequence of TCONS_00020637-protein

>TCONS_00020637-protein ID=TCONS_00020637-protein|Name=TCONS_00020637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=525bp
MESLTVEYFFVEGMSNTFFECCILIFVILSLPYCFTMSQYQQNPDFIKEI
TGIKDKNGERLYQVVWKQNSWVPESQLRSCTEQIGKFEDKNVDTAANGLS
NLQITPPKKVAKEEKVCSPKPKDGKEERKQDAVLRRLPSTTSDIKRHTSV
LEGIKTLTPDFLKDENKKKLIDEALMKFKEKYCNPPKKDDLKAAKGKFGI
VLEDLKLSFKENFLTCKNTEYTGSTYEGLKISGDGLEFDVMFLFEGGEDL
KVLPIKDEVGFAHLALIDKDIVKENAITKSADKDGKILSKKLKDKFKGTL
QNFINNSPQYKELITMKEHGPAIQFDIKRKKDDKDLWYSVDLLPSFEVKV
NEEKHIYVPKKIGTDQNSWRRSFSKEEKDLLRNIDSGNGNRREVARTLKA
MIKKELKNIPSYAIKTTLLHICYGESKIDEELWVPQEYTNRVFDMLALLE
GYFKEKWLPNYFLPTQNLLKNMNDXKWLPNYFLPTQNLLKSMNDRNLEQV
ENRLRGLRMSDKKFLSLTKTDGDLV
Run BLAST on NCBI

transcript from alignment at sc0000359:302494..309820+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020637 ID=TCONS_00020637|Name=TCONS_00020637|organism=Clytia hemisphaerica|type=transcript|length=7327bp|location=Sequence derived from alignment at sc0000359:302494..309820+ (Clytia hemisphaerica)
TTTTTGGCAAGCATGACGTAATGTCTTGTCCATCGCGTACTTTCcccttt
ctcaaattttcatggAATCACTGACAGTTGAGTATTTTTTTGTGGAAGGG
ATGAGTAACACTTTCTTTGAATGTTGCATTTTGATTTTCGTAATACTATC
ATTGCCCTACTGTTTCACCATGTCACAGTATCAACAAAATCCAGACTTCA
TTAAAGAAATCACAGGCATCAAAGATGTaagttttgttttaatttttttt
actgctAGCTATTAACATATAGCATAGCTACTGTAAGGGACTAAATGAAA
CTAATCTTCTATTATATTATGCAAGCGTGTGTTACTCTTGCAAAAGTAAT
ACAATCTGTTTTTTTCCATCAGAATGGAGtttgctggagtttttaattat
tccaCATAGGCATTGTTGTGATTAGCAAAAGGTACTATATTCTTACTCAA
TTacaattgggccattccagaatttgtctgtaacaggatTTCGGAggtca
aaagttttcaccaaaattcgaaatctccaaggtgagagaagaaaatgtat
gaatttccaaggcaaattgaattaaaaaagggtggattttccgatgcatt
ttgcaaaagtacatggattttcatcggaatttccgaacaccactggaaaa
gaaattatttctgaggctataaaaaattaaaaaatgcacgtcaTCCGACG
GGGGGTTGCAAATATTTTCTGGGATGGCCCATTTTATATTGGGTCACGAG
GTTCTAATGAGGctctaaatagacctttttttaaagaggcagccatgttg
aataattatgtactccagagcataaaaacaatgatacagccgtGCATAGT
Agtatatcatgcatattttaaaaattatgcatggctgtatcattgttttt
atgctggagtacataattattcaacatggctgcctctttaaaaaaaggtc
tatttcgtGGGTTTTTCTAATGTccacatccctcttctaatttggACACC
ctttttagagataggaatgaTAGGAATGTCTAGATCTGCCCctaaaatcc
agaaaaaaaaaagccagaaaaacaggtaaatatggccagttttaaatgat
tttgtccctgaactgtagatattatcaaaattttgcccCTGTTCTTGAAA
AGTGGGCAATCTCTGCCCTCGAGATCTCAATGATTTCTTCCATACTCTGA
AAAACTGgtcactaagcaaagaaaagttGTTTCCATCATAAGTCCTTGGA
TTTCACGATACAGCCCctctttttttaaatgcagTATCTCTGTTTTTATG
ACAAGGGAGATTATAGCATGCACATAGGAAAGGTTTGGATATTATCCCAG
ctatatttttaaattgaattcttgtgcgatcaaaattgaaataaagatGG
CGGGTGAGGCCAAGGATGGAATTGGATAAAATTCCTACAATCTTGCAACT
TTCTGActcaaaagatttggaaaagttAAGCAGTCAGTTGGacgactttt
gaaaaaatacccactattttgttttgatgactgtttttaaaaactACAAT
GTTTTAGCCTGTTTTAGCAAGCTCAACATTTACTTCATAGCAATCCAGTC
CTCACTTTTTATTCTGTCATAAGATTCACTCAGTCTGTCTGTGTCAGTCT
CGAGTGAGTTAGGACTTGTCTCAAAAACATAGCAATTACCCAAACTTTTT
GAGACCTATAAAAGTCATATAGACTTTTTTTGTAGGGCGCAATATCATAT
CTTATAATTAAAAGCTCTGGCATCAACAATCTGGAAACAAGGTAATATGA
CATACTGGATATCCTTGCCATAGcctaatcaagtttttgaaattgaatcT
TTATGCTAGATACATCTGCCACATATGCCTTGTTTTCCAAACTGGTCCAC
AGCATGTGAAAAGCAGAATTAGTAAACACAGGGGAGTttaattagtacta
gtaataacatggtttagagggtgatttgggattaataaccccgaggtatg
aaaacatttcaaaatattttgaagtgttttcaatgaaacgaggggttatt
aatccaaaatcacccgagaataccatgttattccgcgttaattatatggt
caaaaaaagaattcgactgacactcttattttgattggcttaaaaatttt
gtacgatattttgttaaccaatcaaaatattgtATGATACTTTTcattca
accaatagaaatttttgtttacatcagggcgattacaaatAAGCGGGgtt
attacggatttatcgcccgctcgtcctttacaaatctaagctaaatgtaa
tcatccatataattaattaattaatcattattttgatgctaGAGTGTAAT
AATGATATTCAACATGACGTTGACTTAAGATTATGGGTAATGCAAATTAT
GTTTGACCCTGTGCTTTTTAAAATCCTCTTGTTAATACAAAAATATGTTT
GAGACTTGACTTTTTAACTCCCCTGAGtacattatttattatttttccaa
CCAGAACATTATGTACTTGTTATTAGCCTCAGGAGGTTAAAAAGGAATGA
CACTCACTCCAATATTGCAATGAATCACAATTAGGGAATTTTCTTACTGG
AAtattaaattttgataaaattccaTTTACCTGGAACTCCAATCTATTAT
AATTGGGTTGgatttcagaaaatttaattttttaagtgAGTTTGtgtctt
tttcatgaaaataaatCCCTCAAAGTCATGTAAAATTACATAGCAAATAC
CAATAGAATTTCTAGCAAAAAGGCTTTCAGCTGGTAAAACCATGTTATTG
GCAAAATTGAATTCATACAAAATTTGACTAGCAAATCCAGAAAGTTTAAT
GATTCttctaaataaaatattttgcacaaatTTACTTTTAGAAAAATGGA
GAAAGACTTTATCAAGTTGTTTGGAAACAAAACAGCTGGGTTCCAGAATC
TCAACTCCGAAGTTGTACAGAACAGATTGGAAAGTTTGAAGATAAAAATG
TCGATACTGCTGCAAATGGTTTGAGTAATCTTCAGATTACTCCTCCTAAA
AAGGTGGCCAAAGAAGAAAAGGTGTGCTCTCCAAAACCAAAGGATGGAAA
AGAGGAAAGAAAGCAAGGTAAAAAGATTTAGTATCCATTGAAAACAGAAA
GACTTTGTTATGTTGTCTTTGGACTAACTTtagatactttaatcgtagaa
attttagccagactaattttagcgtatattagcgagtcaggaaaatcttg
attttttttggatttattttagcaaatcatgatttcaaaaaatttcgcgc
ggataaattttagcgaatactcgcattacattattgactgaatttgtttt
ctagcatttctttgcactgaaacccttcctattgataaaaatgtatcaag
gcaatataaccagaaatttcacGCGGATAAAtcttagcgatctgtcgatt
cagTGTGTTTTAGCGAGaattattttagcgaaaatagggaaaactcgcta
gaacgctaaaattagtctcgctaaaacttctacgattaaagtagttgGAA
AAATTCAATCAATAAAGCCTTTTTTTAGattgtgatttgaaaatatatat
ttttgaatatatttttttttatttaatatttttttaaagatgctGTTTTA
AGACGCTTACCATCAACCACCTCTGACATCAAAAGACACACAAGCGGTAA
GATTAATAACGTAACCAATTTGGCCAATTCGCCAATTTTTATACAATTTG
GCAAAAAGAAGAATTaagcaaatattttaatttgggACGAGTTTATTCTC
ATGAGTGACTATTTGACTATTTTTCTTATCATTTCGAACCAATGCTGGGT
AATCAATTATTCAACAACAAAAGATTTATTAAAAGAAGCATTTTCCAATT
TCACTCTCGGGATGATAGCATGATAGCATTGATTTTTTTTTTTTTCACTT
TATTTAACGTTGGAAAATTATAAAAAATAGTAACTTAATACTAATACAAT
CCGACAAACTATAATTAAGATGTATAAAAAATTCTATAATATATATATAA
TATATATTAAAAAAACTACACTAGATTATGGGTAGAAGAGGAGATTCATC
TACATGAGATGGTAGTCTCATCTAGTTTATTTTTAAAATCCAAGATAACA
CTCGGAATTTCATTCCAAGTCATTGTGGCGCGAAAGTCAAAAGAATCGGT
GTAAGTATAGTTTGGAATTTCAAGCAAATCTCCTGATCTTAGAACATATG
GTATTTGCTTTGTTTCAAAAATGTCATGCAAAATTTTGGGGCCCAGTTTT
CTTTAGATTTGAAAACTTTGCAAAGCATAAGTTTAATATTTTGGTCATGA
ATTTCAATCGAATTAGATCTAACAAGAAGTTTTTCAAAGGACTCGGTAAA
GTTTGAAAATCTTGCTTTGTGGGCTCTGTAATGCGTTTTATTGATTAATG
CATGTGCAGTTTTAGAACAAAACATCCATATGAGTGGAcaataattgaaa
attgacaTAATAAAAGTGAAATATAAGATGTCACGTTTTTCTTGGGACAA
AATAGTCCTTATCCTCATTAAGGctttaattttgttgtttgcatTTGACG
TAAGGTCTAATAGATGAGGATAAAAACAGAATTTGTCATCAATCAAAACT
CCTAAAAGTTTTACAATTTCAGAACTATCAATAATATTACCATTAATGAT
CAGAGAAATATTACATTTTGGACTACCTGGGAAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGACTACCTGGGAA
GATGACTTGAAACTTTGCTGAGTTTGCCACCAATGAATTTTGTGCATACC
AATCTAACATTAGTTTTGCTTTTTTGGAGAGCATAGTGAAAACAATTTCA
AGCGTTTTTCCTGCCACCGAAAGAGTGTTATCGTCAGCAAAGTTACAGAT
GTCATCTTCATTAAATATGATAAACATATCAttaatgaaaacattaaata
aaaTAGGTCCTAATACTGACCATTGAGGAACCCCAGGTTTTTTAAAACTC
AGAAAATATTAACCCAACCTTTTAAATGGCTTATTGGAAACCCAAATAAC
AGCAGAAAAAGGTTATCGAATATGAAAGAAAATCAATCCAGAGCCCTCtt
gttttttaggtttttttctGGTTGATGACAGTACTAAAAATCTACTAGTA
AACGCTCTTGTATTTCCGCATCATCTTCTGTGTTACAAAAGTTTGATTCT
CTTTCTTGGCAGATAAATCAAGTCCACCCAATTAATAAAGATTTTCGTCA
GCTCTTGTGACTATTCTTCTGCTGTTGTTAAAATGAAAGGTTTTCAATTT
CCTGCTATTAATCTTTCAGTTCTGGAAGGCATCAAAACATTAACTCCAGA
TTTTCTCAAAGACGAAAATAAGAAGAAACTTATAGATGAAGCTTTGATGA
AATTCAAAGAGAAATATTGCAATCCACCAAAAAAGGACGACCTTAAAGCT
GCAAAGGGAAAGTTTGGTATTGTTTTGGAAGATTTGAAATTGTCtttcaa
agaaaactttttaacgtGTAAAAACACTGAGTACACTGGCTCAACATATG
AAGGTTTAAAGATCTCAGGAGATGGACTCGAATTTGACGTTATGTTTTTG
TTCGAAGGTGGAGAAGATCTAAAAGTTTTGCCAATAAAAGATGAAGTGGG
CTTTGCACATTTAGCTTTAATTGATAAGGATATTGTGAAAGAAAATGCAA
TTACCAAATCAGCTGATAAGGATGGTAAAATTCTGTCAAAAAAACTGAAA
GACAAATTCAAAGGGACAttacaaaatttcattaataaTTCTCCTCAATA
TAAAGAATTGATTACAATGAAGGAGCACGGTCCAGCTATTCAATttgata
tcaaaagaaaaaaggatGATAAAGACCTTTGGTATAGTGTTGATTTGTTA
CCCTCCTTTGAAGTCAAAGTAAATGAAGGTAAGcaacccaaaaagtcttt
tCGCCTTTAACTAATTTCCATTccaaagaataattttttttaaatacagc
aaaattaaaatagctttgaaaagtttcttttttgataatcaattttcccg
ttttcaatgaaaatgctaTCTTGAATATTTAGCTCAAATCTtcataaatg
tttttttgctttttgtatCCTTGGAATTAAGTTAATTTTCTTCAAGTGAT
ATTCAAACGTTTACAAAACCTTCCTCAAGTTTAATCGTTGATTTCatctt
attattatttatttttgtttacagAAAAACACATTTATGTACCAAAGAAA
ATTGGAACTGATCAAAATAGTTGGCGTAGATCATTTTCTAAGGAGGAGAA
AGATCTCCTTCGAAATATTGATTCGGGGAACGGAAACCGAAGAGAGGTTG
CTCGcacattaaaagcaatgatcaAAAAGGAATTAAAAAATATCCCATCG
TATGCTATCAAAACAACTTTGCTTCATATATGTTACGGTGAATCAAAAAT
AGATGAAGAGTTATGGGTACCCCAAGAGTATACAAATCGTGTTTTTGATA
TGCTTGCATTACTTGAAGGCTACTTCAAAGAAAAATGGCTACCAAATTAT
TTTCTACCAACTCAGAATCTGCTTAAGAATATGAATGACANAAAATGGCT
ACCAAATTATTTCCTACCAACTCAGAATCTGCTTAAGAGTATGAATGACA
GAAATTTGGAGCAAGTTGAGAACCGTTTGAGAGGATTACGAATGAGTGAC
AAGAAGTTTTTAAGTTTGACCAAAACCGATGGTGATCTGGTGTAGATACA
TTTTGATTCTAAATGAAAACTTTGAAGAGATTCATGGTTAAAGTATAATA
TCTAGCTAGCCGTGTTTTTGTGTATGAGTCTCATTCTCAATCcaagtatt
tcaaaatattgtgaaCAAAATGTTTACTTCTAGATAAGGTCATGAGATAA
AGGAAATGTGTTATTGGTCAATACCAGTCAGTttatttatatttgttttt
tattttcaaagcttttaaTTTTGTAGATGTGGTTTGATACCATTTTAAAT
TGTTGCAGCTGCCAAGCAGTAATTGCAATCAAAAGTACTagtgaatattt
caaaatttgtatttttaaaaaggtCGATTAAAAAGAATAGTAGTTGTTAG
TTTGCTATTGCTTTCTtttcattatttatgacgtcataatttgaaaaaag
ttgaatatctcaagaactaattctcgaaactttatgaaatttggaccaat
gatcgaacttatcaagaggaggagaat

Coding sequence (CDS) from alignment at sc0000359:302494..309820+

>TCONS_00020637 ID=TCONS_00020637|Name=TCONS_00020637|organism=Clytia hemisphaerica|type=CDS|length=7890bp|location=Sequence derived from alignment at sc0000359:302494..309820+ (Clytia hemisphaerica)
atggAATCACTGACAGTTGAGTATTTTTTTGTGGAAGGGATGAGTAACAC
TTTCTTTGAATGTTGCATTTTGATTTTCGTAATACTATCATTGCCCTACT
GTTTCACCATGTCACAGTATCAACAAAATCCAGACTTCATTAAAGAAATC
ACAGGCATCAAAGATAAAAATGGAGAAAGACTTTATCAAGTTGTTTGGAA
ACAAAACAGCTGGGTTCCAGAATCTCAACTCCGAAGTTGTACAGAACAGA
TTGGAAAGTTTGAAGATAAAAATGTCGATACTGCTGCAAATGGTTTGAGT
AATCTTCAGATTACTCCTCCTAAAAAGGTGGCCAAAGAAGAAAAGGTGTG
CTCTCCAAAACCAAAGGATGGAAAAGAGGAAAGAAAGCAAGatgctGTTT
TAAGACGCTTACCATCAACCACCTCTGACATCAAAAGACACACAAGCGTT
CTGGAAGGCATCAAAACATTAACTCCAGATTTTCTCAAAGACGAAAATAA
GAAGAAACTTATAGATGAAGCTTTGATGAAATTCAAAGAGAAATATTGCA
ATCCACCAAAAAAGGACGACCTTAAAGCTGCAAAGGGAAAGTTTGGTATT
GTTTTGGAAGATTTGAAATTGTCtttcaaagaaaactttttaacgtGTAA
AAACACTGAGTACACTGGCTCAACATATGAAGGTTTAAAGATCTCAGGAG
ATGGACTCGAATTTGACGTTATGTTTTTGTTCGAAGGTGGAGAAGATCTA
AAAGTTTTGCCAATAAAAGATGAAGTGGGCTTTGCACATTTAGCTTTAAT
TGATAAGGATATTGTGAAAGAAAATGCAATTACCAAATCAGCTGATAAGG
ATGGTAAAATTCTGTCAAAAAAACTGAAAGACAAATTCAAAGGGACAtta
caaaatttcattaataaTTCTCCTCAATATAAAGAATTGATTACAATGAA
GGAGCACGGTCCAGCTATTCAATttgatatcaaaagaaaaaaggatGATA
AAGACCTTTGGTATAGTGTTGATTTGTTACCCTCCTTTGAAGTCAAAGTA
AATGAAGAAAAACACATTTATGTACCAAAGAAAATTGGAACTGATCAAAA
TAGTTGGCGTAGATCATTTTCTAAGGAGGAGAAAGATCTCCTTCGAAATA
TTGATTCGGGGAACGGAAACCGAAGAGAGGTTGCTCGcacattaaaagca
atgatcaAAAAGGAATTAAAAAATATCCCATCGTATGCTATCAAAACAAC
TTTGCTTCATATATGTTACGGTGAATCAAAAATAGATGAAGAGTTATGGG
TACCCCAAGAGTATACAAATCGTGTTTTTGATATGCTTGCATTACTTGAA
GGCTACTTCAAAGAAAAATGGCTACCAAATTATTTTCTACCAACTCAGAA
TCTGCTTAAGAATATGAATGACANAAAATGGCTACCAAATTATTTCCTAC
CAACTCAGAATCTGCTTAAGAGTATGAATGACAGAAATTTGGAGCAAGTT
GAGAACCGTTTGAGAGGATTACGAATGAGTGACAAGAAGTTTTTAAGTTT
GACCAAAACCGATGGTGATCTGGTGTAGatggAATCACTGACAGTTGAGT
ATTTTTTTGTGGAAGGGATGAGTAACACTTTCTTTGAATGTTGCATTTTG
ATTTTCGTAATACTATCATTGCCCTACTGTTTCACCATGTCACAGTATCA
ACAAAATCCAGACTTCATTAAAGAAATCACAGGCATCAAAGATAAAAATG
GAGAAAGACTTTATCAAGTTGTTTGGAAACAAAACAGCTGGGTTCCAGAA
TCTCAACTCCGAAGTTGTACAGAACAGATTGGAAAGTTTGAAGATAAAAA
TGTCGATACTGCTGCAAATGGTTTGAGTAATCTTCAGATTACTCCTCCTA
AAAAGGTGGCCAAAGAAGAAAAGGTGTGCTCTCCAAAACCAAAGGATGGA
AAAGAGGAAAGAAAGCAAGatgctGTTTTAAGACGCTTACCATCAACCAC
CTCTGACATCAAAAGACACACAAGCGTTCTGGAAGGCATCAAAACATTAA
CTCCAGATTTTCTCAAAGACGAAAATAAGAAGAAACTTATAGATGAAGCT
TTGATGAAATTCAAAGAGAAATATTGCAATCCACCAAAAAAGGACGACCT
TAAAGCTGCAAAGGGAAAGTTTGGTATTGTTTTGGAAGATTTGAAATTGT
CtttcaaagaaaactttttaacgtGTAAAAACACTGAGTACACTGGCTCA
ACATATGAAGGTTTAAAGATCTCAGGAGATGGACTCGAATTTGACGTTAT
GTTTTTGTTCGAAGGTGGAGAAGATCTAAAAGTTTTGCCAATAAAAGATG
AAGTGGGCTTTGCACATTTAGCTTTAATTGATAAGGATATTGTGAAAGAA
AATGCAATTACCAAATCAGCTGATAAGGATGGTAAAATTCTGTCAAAAAA
ACTGAAAGACAAATTCAAAGGGACAttacaaaatttcattaataaTTCTC
CTCAATATAAAGAATTGATTACAATGAAGGAGCACGGTCCAGCTATTCAA
TttgatatcaaaagaaaaaaggatGATAAAGACCTTTGGTATAGTGTTGA
TTTGTTACCCTCCTTTGAAGTCAAAGTAAATGAAGAAAAACACATTTATG
TACCAAAGAAAATTGGAACTGATCAAAATAGTTGGCGTAGATCATTTTCT
AAGGAGGAGAAAGATCTCCTTCGAAATATTGATTCGGGGAACGGAAACCG
AAGAGAGGTTGCTCGcacattaaaagcaatgatcaAAAAGGAATTAAAAA
ATATCCCATCGTATGCTATCAAAACAACTTTGCTTCATATATGTTACGGT
GAATCAAAAATAGATGAAGAGTTATGGGTACCCCAAGAGTATACAAATCG
TGTTTTTGATATGCTTGCATTACTTGAAGGCTACTTCAAAGAAAAATGGC
TACCAAATTATTTTCTACCAACTCAGAATCTGCTTAAGAATATGAATGAC
ANAAAATGGCTACCAAATTATTTCCTACCAACTCAGAATCTGCTTAAGAG
TATGAATGACAGAAATTTGGAGCAAGTTGAGAACCGTTTGAGAGGATTAC
GAATGAGTGACAAGAAGTTTTTAAGTTTGACCAAAACCGATGGTGATCTG
GTGTAGatggAATCACTGACAGTTGAGTATTTTTTTGTGGAAGGGATGAG
TAACACTTTCTTTGAATGTTGCATTTTGATTTTCGTAATACTATCATTGC
CCTACTGTTTCACCATGTCACAGTATCAACAAAATCCAGACTTCATTAAA
GAAATCACAGGCATCAAAGATAAAAATGGAGAAAGACTTTATCAAGTTGT
TTGGAAACAAAACAGCTGGGTTCCAGAATCTCAACTCCGAAGTTGTACAG
AACAGATTGGAAAGTTTGAAGATAAAAATGTCGATACTGCTGCAAATGGT
TTGAGTAATCTTCAGATTACTCCTCCTAAAAAGGTGGCCAAAGAAGAAAA
GGTGTGCTCTCCAAAACCAAAGGATGGAAAAGAGGAAAGAAAGCAAGatg
ctGTTTTAAGACGCTTACCATCAACCACCTCTGACATCAAAAGACACACA
AGCGTTCTGGAAGGCATCAAAACATTAACTCCAGATTTTCTCAAAGACGA
AAATAAGAAGAAACTTATAGATGAAGCTTTGATGAAATTCAAAGAGAAAT
ATTGCAATCCACCAAAAAAGGACGACCTTAAAGCTGCAAAGGGAAAGTTT
GGTATTGTTTTGGAAGATTTGAAATTGTCtttcaaagaaaactttttaac
gtGTAAAAACACTGAGTACACTGGCTCAACATATGAAGGTTTAAAGATCT
CAGGAGATGGACTCGAATTTGACGTTATGTTTTTGTTCGAAGGTGGAGAA
GATCTAAAAGTTTTGCCAATAAAAGATGAAGTGGGCTTTGCACATTTAGC
TTTAATTGATAAGGATATTGTGAAAGAAAATGCAATTACCAAATCAGCTG
ATAAGGATGGTAAAATTCTGTCAAAAAAACTGAAAGACAAATTCAAAGGG
ACAttacaaaatttcattaataaTTCTCCTCAATATAAAGAATTGATTAC
AATGAAGGAGCACGGTCCAGCTATTCAATttgatatcaaaagaaaaaagg
atGATAAAGACCTTTGGTATAGTGTTGATTTGTTACCCTCCTTTGAAGTC
AAAGTAAATGAAGAAAAACACATTTATGTACCAAAGAAAATTGGAACTGA
TCAAAATAGTTGGCGTAGATCATTTTCTAAGGAGGAGAAAGATCTCCTTC
GAAATATTGATTCGGGGAACGGAAACCGAAGAGAGGTTGCTCGcacatta
aaagcaatgatcaAAAAGGAATTAAAAAATATCCCATCGTATGCTATCAA
AACAACTTTGCTTCATATATGTTACGGTGAATCAAAAATAGATGAAGAGT
TATGGGTACCCCAAGAGTATACAAATCGTGTTTTTGATATGCTTGCATTA
CTTGAAGGCTACTTCAAAGAAAAATGGCTACCAAATTATTTTCTACCAAC
TCAGAATCTGCTTAAGAATATGAATGACANAAAATGGCTACCAAATTATT
TCCTACCAACTCAGAATCTGCTTAAGAGTATGAATGACAGAAATTTGGAG
CAAGTTGAGAACCGTTTGAGAGGATTACGAATGAGTGACAAGAAGTTTTT
AAGTTTGACCAAAACCGATGGTGATCTGGTGTAGatggAATCACTGACAG
TTGAGTATTTTTTTGTGGAAGGGATGAGTAACACTTTCTTTGAATGTTGC
ATTTTGATTTTCGTAATACTATCATTGCCCTACTGTTTCACCATGTCACA
GTATCAACAAAATCCAGACTTCATTAAAGAAATCACAGGCATCAAAGATA
AAAATGGAGAAAGACTTTATCAAGTTGTTTGGAAACAAAACAGCTGGGTT
CCAGAATCTCAACTCCGAAGTTGTACAGAACAGATTGGAAAGTTTGAAGA
TAAAAATGTCGATACTGCTGCAAATGGTTTGAGTAATCTTCAGATTACTC
CTCCTAAAAAGGTGGCCAAAGAAGAAAAGGTGTGCTCTCCAAAACCAAAG
GATGGAAAAGAGGAAAGAAAGCAAGatgctGTTTTAAGACGCTTACCATC
AACCACCTCTGACATCAAAAGACACACAAGCGTTCTGGAAGGCATCAAAA
CATTAACTCCAGATTTTCTCAAAGACGAAAATAAGAAGAAACTTATAGAT
GAAGCTTTGATGAAATTCAAAGAGAAATATTGCAATCCACCAAAAAAGGA
CGACCTTAAAGCTGCAAAGGGAAAGTTTGGTATTGTTTTGGAAGATTTGA
AATTGTCtttcaaagaaaactttttaacgtGTAAAAACACTGAGTACACT
GGCTCAACATATGAAGGTTTAAAGATCTCAGGAGATGGACTCGAATTTGA
CGTTATGTTTTTGTTCGAAGGTGGAGAAGATCTAAAAGTTTTGCCAATAA
AAGATGAAGTGGGCTTTGCACATTTAGCTTTAATTGATAAGGATATTGTG
AAAGAAAATGCAATTACCAAATCAGCTGATAAGGATGGTAAAATTCTGTC
AAAAAAACTGAAAGACAAATTCAAAGGGACAttacaaaatttcattaata
aTTCTCCTCAATATAAAGAATTGATTACAATGAAGGAGCACGGTCCAGCT
ATTCAATttgatatcaaaagaaaaaaggatGATAAAGACCTTTGGTATAG
TGTTGATTTGTTACCCTCCTTTGAAGTCAAAGTAAATGAAGAAAAACACA
TTTATGTACCAAAGAAAATTGGAACTGATCAAAATAGTTGGCGTAGATCA
TTTTCTAAGGAGGAGAAAGATCTCCTTCGAAATATTGATTCGGGGAACGG
AAACCGAAGAGAGGTTGCTCGcacattaaaagcaatgatcaAAAAGGAAT
TAAAAAATATCCCATCGTATGCTATCAAAACAACTTTGCTTCATATATGT
TACGGTGAATCAAAAATAGATGAAGAGTTATGGGTACCCCAAGAGTATAC
AAATCGTGTTTTTGATATGCTTGCATTACTTGAAGGCTACTTCAAAGAAA
AATGGCTACCAAATTATTTTCTACCAACTCAGAATCTGCTTAAGAATATG
AATGACANAAAATGGCTACCAAATTATTTCCTACCAACTCAGAATCTGCT
TAAGAGTATGAATGACAGAAATTTGGAGCAAGTTGAGAACCGTTTGAGAG
GATTACGAATGAGTGACAAGAAGTTTTTAAGTTTGACCAAAACCGATGGT
GATCTGGTGTAGatggAATCACTGACAGTTGAGTATTTTTTTGTGGAAGG
GATGAGTAACACTTTCTTTGAATGTTGCATTTTGATTTTCGTAATACTAT
CATTGCCCTACTGTTTCACCATGTCACAGTATCAACAAAATCCAGACTTC
ATTAAAGAAATCACAGGCATCAAAGATAAAAATGGAGAAAGACTTTATCA
AGTTGTTTGGAAACAAAACAGCTGGGTTCCAGAATCTCAACTCCGAAGTT
GTACAGAACAGATTGGAAAGTTTGAAGATAAAAATGTCGATACTGCTGCA
AATGGTTTGAGTAATCTTCAGATTACTCCTCCTAAAAAGGTGGCCAAAGA
AGAAAAGGTGTGCTCTCCAAAACCAAAGGATGGAAAAGAGGAAAGAAAGC
AAGatgctGTTTTAAGACGCTTACCATCAACCACCTCTGACATCAAAAGA
CACACAAGCGTTCTGGAAGGCATCAAAACATTAACTCCAGATTTTCTCAA
AGACGAAAATAAGAAGAAACTTATAGATGAAGCTTTGATGAAATTCAAAG
AGAAATATTGCAATCCACCAAAAAAGGACGACCTTAAAGCTGCAAAGGGA
AAGTTTGGTATTGTTTTGGAAGATTTGAAATTGTCtttcaaagaaaactt
tttaacgtGTAAAAACACTGAGTACACTGGCTCAACATATGAAGGTTTAA
AGATCTCAGGAGATGGACTCGAATTTGACGTTATGTTTTTGTTCGAAGGT
GGAGAAGATCTAAAAGTTTTGCCAATAAAAGATGAAGTGGGCTTTGCACA
TTTAGCTTTAATTGATAAGGATATTGTGAAAGAAAATGCAATTACCAAAT
CAGCTGATAAGGATGGTAAAATTCTGTCAAAAAAACTGAAAGACAAATTC
AAAGGGACAttacaaaatttcattaataaTTCTCCTCAATATAAAGAATT
GATTACAATGAAGGAGCACGGTCCAGCTATTCAATttgatatcaaaagaa
aaaaggatGATAAAGACCTTTGGTATAGTGTTGATTTGTTACCCTCCTTT
GAAGTCAAAGTAAATGAAGAAAAACACATTTATGTACCAAAGAAAATTGG
AACTGATCAAAATAGTTGGCGTAGATCATTTTCTAAGGAGGAGAAAGATC
TCCTTCGAAATATTGATTCGGGGAACGGAAACCGAAGAGAGGTTGCTCGc
acattaaaagcaatgatcaAAAAGGAATTAAAAAATATCCCATCGTATGC
TATCAAAACAACTTTGCTTCATATATGTTACGGTGAATCAAAAATAGATG
AAGAGTTATGGGTACCCCAAGAGTATACAAATCGTGTTTTTGATATGCTT
GCATTACTTGAAGGCTACTTCAAAGAAAAATGGCTACCAAATTATTTTCT
ACCAACTCAGAATCTGCTTAAGAATATGAATGACANAAAATGGCTACCAA
ATTATTTCCTACCAACTCAGAATCTGCTTAAGAGTATGAATGACAGAAAT
TTGGAGCAAGTTGAGAACCGTTTGAGAGGATTACGAATGAGTGACAAGAA
GTTTTTAAGTTTGACCAAAACCGATGGTGATCTGGTGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011576XLOC_011576Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020637-exon-sc0000359-1491911889:302494..302719TCONS_00020637-exon-sc0000359-1491911889:302494..302719Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1510915933:302494..302719TCONS_00020637-exon-sc0000359-1510915933:302494..302719Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1575043694:302494..302719TCONS_00020637-exon-sc0000359-1575043694:302494..302719Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1491911889:305385..305610TCONS_00020637-exon-sc0000359-1491911889:305385..305610Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1510915933:305385..305610TCONS_00020637-exon-sc0000359-1510915933:305385..305610Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1575043694:305385..305610TCONS_00020637-exon-sc0000359-1575043694:305385..305610Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1491911889:306133..306189TCONS_00020637-exon-sc0000359-1491911889:306133..306189Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1510915933:306133..306189TCONS_00020637-exon-sc0000359-1510915933:306133..306189Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1575043694:306133..306189TCONS_00020637-exon-sc0000359-1575043694:306133..306189Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1491911889:307913..308521TCONS_00020637-exon-sc0000359-1491911889:307913..308521Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1510915933:307913..308521TCONS_00020637-exon-sc0000359-1510915933:307913..308521Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1575043694:307913..308521TCONS_00020637-exon-sc0000359-1575043694:307913..308521Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1491911889:308818..309820TCONS_00020637-exon-sc0000359-1491911889:308818..309820Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1510915933:308818..309820TCONS_00020637-exon-sc0000359-1510915933:308818..309820Clytia hemisphaericaexon
TCONS_00020637-exon-sc0000359-1575043694:308818..309820TCONS_00020637-exon-sc0000359-1575043694:308818..309820Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020637-proteinTCONS_00020637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:302494..309820 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.6241	9.39947	5.51828	5.26506	7.62727	4.87307	8.23836	9.41549	5.68001	7.95833	8.71682	4.48364	12.829	9.02656	8.77028	12.5564	5.79611	5.50882	10.64	12.4838	6.67413	5.91681	11.5602	11.5627	11.0886	13.9303	9.23034	10.2689	9.68833	10.1869
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
IPR016197Chromodomain-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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