TCONS_00020454 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020454
Unique NameTCONS_00020454
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length130

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020454 ID=TCONS_00020454|Name=TCONS_00020454|organism=Clytia hemisphaerica|type=transcript|length=130bp
ACCCTGTTCAGCGGGTGCTAGGAGGGGGATAGGTAAGGGAAATTAAAGCA
AAGTTGATAGAAAATGATAGAAAAGTGCtgagtggtaaaacttcaaactg
atttgctggaggacagaatcaagttaatca
Run BLAST on NCBI

transcript from alignment at sc0000356:234631..234760

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020454 ID=TCONS_00020454|Name=TCONS_00020454|organism=Clytia hemisphaerica|type=transcript|length=130bp|location=Sequence derived from alignment at sc0000356:234631..234760 (Clytia hemisphaerica)
tgattaacttgattctgtcctccagcaaatcagtttgaagttttaccact
caGCACTTTTCTATCATTTTCTATCAACTTTGCTTTAATTTCCCTTACCT
ATCCCCCTCCTAGCACCCGCTGAACAGGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011497XLOC_011497Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020454-exon-sc0000356-1491911889:234631..234760TCONS_00020454-exon-sc0000356-1491911889:234631..234760Clytia hemisphaericaexon
TCONS_00020454-exon-sc0000356-1510915933:234631..234760TCONS_00020454-exon-sc0000356-1510915933:234631..234760Clytia hemisphaericaexon
TCONS_00020454-exon-sc0000356-1575043694:234631..234760TCONS_00020454-exon-sc0000356-1575043694:234631..234760Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000356supercontigsc0000356:234631..234760 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020454 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top