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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020159 ID=TCONS_00020159|Name=TCONS_00020159|organism=Clytia hemisphaerica|type=transcript|length=1092bp
TCAATACAAAACTACTTACCCTCTCTTAtctgaaatttctttcaaaactt
cTTCACTTTGGTGGAGAATTTATGAAAACAAACGCTCGGCGCCGTAAAAT
TATTCACGATCGAATgcaaaatggtagacaaaggaGCGCAGATTATTTTT
GATGTTgttgagttttttctttttttactgcAGAAGGCTGTTTAACTCCA
ACTTTTCAGAGACAAATCCCAAAGCTATTGAAAATTGAAGGATGGCTTCT
GGTGAAAGTGTAAATACTTCTGAATTTTATGCGCAACAAGCAAAGACTAC
TGATGATGCTGCTTCAATAGCATTTGTTGTTGGAAAGAATAAATATCCCT
TAGATGAATGGTTGAAAAGGAACAAGCCTTCAAATGTCCGTAGGGATCAA
GGATTTGGCTGGATCTGGGTGTTACGTCCAGAAGATGACAATAATGACAA
TAATGAAGATTTTGACCCAGATAAAATGATGGATGAATGGCAGAAAGTAA
ATGCTTCTGAAAGCATTAACATCACTAAAGAATATGTTTTTGAACTAGCA
CGCAAACATAAATGTACATCAGGAGAATGGTTAGTAACAACCAGACCTGG
TATAGAAACTGACCGACTGTGGGCTATCATTGCAAAAGGAATTGTTAATG
GGGAAACATTGGCTAGGCATGCTAAAGTGAGTGCACATGAGGGACCAGAT
ATTAGACATGTTTTCTGTATTTATAATGATAACTTTTTAGATAAAGATCA
AGTTATGGAGAATGAAAGAACAATTAGGGAATTAGGAATCAAACGTGCTT
TGACATACAAACCAGATGTTTACACATATTTAGGTATTTATCGAAAGAAT
CGCTGGAAGATTCGACCAACCATTTATACAAGCAATTGGGACATTTTGAA
GAAAGGAACAATTATCAAAGAGACATAATTTTCATATCAAATAAATCATA
TTATTTAATATAAACCAGGGGGTTTTGATTTAGGTCGGCCACTGTATTTC
TACAACATTTAGTTTCTGACAGGTGTCATATTTTTATGTATAACTACATA
GATATTATTAACTACATAGAGTTTACCCCCACCCCCCCCCTC Run BLAST on NCBI protein sequence of TCONS_00020159-protein >TCONS_00020159-protein ID=TCONS_00020159-protein|Name=TCONS_00020159-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MASGESVNTSEFYAQQAKTTDDAASIAFVVGKNKYPLDEWLKRNKPSNVR
RDQGFGWIWVLRPEDDNNDNNEDFDPDKMMDEWQKVNASESINITKEYVF
ELARKHKCTSGEWLVTTRPGIETDRLWAIIAKGIVNGETLARHAKVSAHE
GPDIRHVFCIYNDNFLDKDQVMENERTIRELGIKRALTYKPDVYTYLGIY
RKNRWKIRPTIYTSNWDILKKGTIIKET Run BLAST on NCBI transcript from alignment at sc0000350:163797..179552+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020159 ID=TCONS_00020159|Name=TCONS_00020159|organism=Clytia hemisphaerica|type=transcript|length=15756bp|location=Sequence derived from alignment at sc0000350:163797..179552+ (Clytia hemisphaerica)
TCAATACAAAACTACTTACCCTCTCTTAtctgaaatttctttcaaaactt
cTTCACTTTGGTGGAGAATTTATGAAAACAAACGCTCGGCGCCGTAAAAT
TATTCACGATCGAATgcaaaatggtagacaaaggaGCGCAGATTATTTTT
GATGTTgttgagttttttctttttttactgcAGAAGGCTGTTTAACTCCA
ACTTTTCAGGTAAATTGACAGGTATAGTTTATTATCTTATCTCTACTTGT
CTACTGTAGCTTCCTGTAATGTTGATATACCTTGTTTAATTCCGTCACAG
CAACAactatctggtctgcaaagtagTATGAGATatgaccagacggtgtc
aatcgaactgtttgcGAACTCGAACTATTTGcgatgttagcttttttagg
cttatgcaaataaatggatagaaaatagaaatagaacaacttcgaacaaa
aatcgcaatcgaaccaatcgaacgtaatcgaatgtgatcgaataattgcg
attcgattgtagaacgtaatcgaatctcaatcgaatggcagattcctggg
taatattcgattgtgttcgattgcgttcgagtaaggttagattggttcgc
tcgattgatagttgactatgacatggcatggaccaggggtttaggtaccc
cctaagaaaacaggtaccccctgaattttaggtaccccctgaattttagg
tacccccaaacaacagacgttagtaggtaccccctgtgaaTGGTACCCCC
TGTGTGACTTGAGTgtatgtcaagaaatgaaaaaaattgtatatttttac
aattaaaaagaataatgatagttagataaaagcaagataaaatatagttc
ccaagcccccagcccttactgcataaaagttagatacccccagagatcat
aggttccccctgaattttaggtcccccctgaattttaggtcccccctgaa
ttttaggtacccccaaacaacggacgttagtaggtaccccctgtgaaTGG
TACCCCCTGTGCGACTTGAGTgtatgtcaagaaatgaaaaaaattgtata
tttttacaattaaaaagaataatgatagttagataaaagcaagataaaat
ttagttcccaagcccccagcccttactgcataaaagttagatacccccag
agatcataggttccccctgaaattgaaaaaaaatccagcccccagccttt
tcaggaagattttggttgtagcccccccccccttgcgggctggggggggg
ttcatgccatgctatgttcgattggttcgattgattgtcaattacattgg
aataatcttcgatttcgttcgattacgattatgttcgatgagtttgattg
cgattaaattaaattggatcactctgttagagtaGAGCTCTTTCAGTCTT
TAGTGTGGGCGGCCGGGTGCTTGTGAAGtaccataccaaagcgaataaaa
tctaatacaattgaatcaatcaaacgtaatcaaatacaatcgaacgtaat
cgaatacaatcaaacgtaattgaatacaatcgaacgtaatcgaagcaatc
gaacagcaaatcctgggtaatatttaattaattcaattaattgcgttcga
caatcgaattgcaattattcgagtgcgttcaattgcgttcaattgcgttc
aattgcgttcgattgattcggcgttcgattcgttcgattgacaccgtctg
gatatgAGTTAGTGCGGTGCGTGAATTTTTTAAATAGCTAATATTCAGAA
GGTTTTATCTACTAGCCGTAATGTATAAGGGTTGCAAAGcaatccagact
ccacctcaattcgcaagttgctagcaaaactagctgtattgtataagggt
tgcgaagcgatcgagACTCCACCACCTCAATTCTAGCAACTcgagaagat
ttttcaaatttgaattttttttggaaaacctacagtatcctatcttgtag
tgcttttcaaaagaaagaaaactgaGGGGACATAGGCCTCCAGaagataa
gtggttgtaaagatattcaaattttagtgccgaaaatttgactgaaaaca
gttagggaaaccatccatcaggatcctgccattctataagccagaaaaaa
ctaaatgacacttgtaaactgaAGTTTCTTTACCATTTCCCaccgaaaac
aaccaaaaacattgctacttcccaaagccggagaccaaaacaaattaaaa
tcttccaagattatggcacctttttggatctattgttaaggccatctaaa
atggtggaaagagtgtGGTAACGctaaaacgcccaatatgatcttccaac
tgCCAACAGAAAGCGAGTTAGTTCCCGCGCGAGTTACATcatgcactcca
tcgcagcgctCAACGAAGTGTGTTtgaatgaatatcattaattataagaa
tatcttatgtgcttaccttcagtaaacttcgagtgcttcattgaaaacga
agaaggtaagaagataaaaaatgcgctggataattttcattgtatataac
agtttggtcaatcatcgctgaaagtttgaaaaagtttttccgacgcaaaa
aaagatttcagttAATTAAAAGCACAGTATGCTTtatatacttactatgt
ttgctacatcctctaggctaaaaaaagtgtgaaaacacacaaatgccatt
ttttaatgagtgatgttatgatatttttgattaTACATATTATAgataca
ggaactcgccaaatgctcctaactgaaaaatttcaaaaaaggtttaggaa
aatagcttgaaaaaattcgaaaaatgtgtcaaaaaagaaataaaatcttt
tttctagtcatgcttctttaattttgtttatctctttttctagtgtagct
agagacctgaaatttggagggagaattctttgatggtaaATAGCTTGGAA
ATGGTTGAAATGAGAATtgccatgctaaagaagcaaaaaagtgaaaaaaa
actacatgaatatgaaagaactaaaattagcaaatttgatttttgaactc
cccaccctttttctgataaacatacaaagtttcagccttccactacattt
tcctccatttccagaaacatttgttcatcgatagttgcaactttttcttc
tcctgtcgaaaaataatttcaaaaatgttgcaAAAGCGTTTGGCACTtta
gtgttatataccgctggaaagctaagatcacgggctttcttttagtaaaa
accggaacgctttagcatacacagaaaaaaagttcgaagggttcaaagtt
cacagaaaaatgaaacatttggtttgacgtcaacacaagttgacttctgg
agtcgctatacaattcgcaagttgctagcaaaataagagccACTCTGATA
AAACCCCAAAAGAGACAGGGTTTAaaatcagttagtcacactagcgtccc
gctgaaatgcatatcaaagattaatgctgcgaaagcgctatatcgtttat
ctgactctcaagcaaaaaaatgcactgcaaaacttctaaaaggatttata
aaaaaataaccaggcgctttttaatgaaactagcattctcaaaaactatg
agaaattgcctaaaatttaagccatagatgaaaaaatttgagccaagcca
accttgagaactaatttgaagatcatcttctcaagaaaaagatctacggg
ggagaatTTGTACTTAACCATAAATCATTCATGTCTATACCTTTTTGGGT
TTTCTTTGGAATCCATTCTCTTCCTCTTTTCTCCGTTATTATGCGTTTAA
AATAAGTCCATTCTAATTTGCCGGGACCCGATTTCAATGTCATTGTAACA
CGCCCGGAAAAGTACTATACCGATTTAAATATTTGGAAATGATTGTCCGT
GTTtgtaatactctcgggtacctaatagccgcccccccccgCTGATTaac
gtatttttcaaggaaggcAGAGTACTATATGGGAGAGTAAATAcatagtg
tattccgccttctttagaaacatttgaaagggttttttttaaagaaggcg
gaatactactGTATCTTAGGGCAGTAAGgccatagtagtgtattccgcct
tctttagaaacatttgaaggggtatttttttaaagaaggcggaatactat
gttagggcagtaagtccaaagtagtgtattctgcctttagaaacattcga
aggggtatttttttaaagaaggcggaatactatgttagggcagtaagtcc
aaagtagtgtattctgccttctttagaaacattcaaaggggtattttttt
aaagaaggcggaatactatgttagggcagtaagtccaaagtagtgtattc
tgctttctttagaaacattccaaggggtatttttttaaagaaggcggaat
actatgttagggcagtaagtccaaagtagtgtattctgccttctttagaa
acattcgaaggggtatttttttaaagaaggcggaatactatgttagggca
gtaagtccaaagtagtgtattctgccttctttagaaacattcgaaggggt
atttttttaaagaaggcagaatactatgttagggcagtaagtccaaagta
gtgtattctgccttctttagaaacattcgaaagtgtattttttaaagaag
gcagAATACACTGTTTGGATTTTTTGTTCTAATATAGTAtttcgccttct
ttagaaattttgaaataaggaaaatcgggactaaaaatttctcgttGCCA
TATATAGTTTTAATTGAGTCCCGAATCGAATATGTTCGTAAAgtaaatcg
ggactaaaaatttctcgttGCTATATATAGTTTTCAttgagtcccgaatc
caatatgtttgtaaggtaaatcgggactaaaagtttctcgttgctatata
tacttttacttgagtcccgaattaAACCTTTTCGTAAACCAATTCGGGAC
CATCCCGAATCAAACCTTTATATAGACGGAGTCGGGACCGTCCCGAAACG
GACATTTTCAAGACAAGCTATAGATAGCCCGTATAAATAAAGATCTGCCC
CAcacttccctgattttcaaattcaagccgccgtatccatcttttcagtg
actcagatagtaaatttgtattatatatacttttacttgagtcccgaatc
aAATATGTTTGTAAggtaaatcgggactaaaagtttctcgttgCTATATA
TACTTATATATGCTATATATAATTCAACCTTTTCGTAAACCGATTCGGGA
CCATCCCGAATCAAACCTTTATATAGACGGAGTCGGGACCGTCCTGAAAC
AGACATTTTCAAGACAAGCTATAATTAGCCCGTATAAATAAAGATCTGCC
CCAcacttccctgattttcaaattcaagctgccgtatccatcttttcagt
gactcagatattaaatatgtattatatatacttttacttgagtcccgaat
tcaaccATTTCGTAGGCCAAATCGGGAAGTTTAATTTAGTCCCGAATCCA
AACATTTCGTACACAAaatcgggactcaagtaaaagtatatagtataaat
caaaccatcgatcaattttttttttcatcgatttcgacTTCTTTACCACG
TCGTTCTAGATCGGGACAGTCCCGAGCGGGACTCAAGTTAAATTAGGCCG
GAGACGGGACCCACCTAGATCCACGCACTgctggataggctatttcccag
aaattttgcaacttttgaaagttcgaacatttttattcgaatcgtctgtc
gaaatcatcaaaagtaaacaaaagcatAAATCTACAAAGATTGCTTGTTG
TTGGTTCTTGGCCagttttggtttgttttcttgacaaatttgattacctc
cgtacctctttatcattgaatatccacttagttttgcaaggtaagtttag
tTACACTtataaaagagcactcctcctgCACGCGCGACTTGCAAGAAACT
TCTCATTTAtttattgaccttatttgatacttgataattacttttaaaag
tcaaggaatgatgaagatcctttctgtcacctttcaaactatttttttcc
attcaacagcaaaataaacatttaaaactgaAGAACCACTGTTTAGATGc
gtgcccgcgcggcaatttgatcaacttcagattctaagttcgtttttcgg
cttccggtaattttttgCTCTTCACTGCTAGGGTTCACCAttttaaaatg
gcatttttcgcagtcctagctaccaaaccgagaaagtttttgtGGCCTAA
GCCAAACccttcaaggtcattttgacaaaatcatcGGTTTCAAGACGTGA
TTTATGTAGTAAATTtttgcttgggatagaagttaaaggtacgtgcacac
aatGTAGCAAAACTGCTTTGCTCATGAATTCACTCAGATTCACTTCGCAA
TAAGAGACACTCTGAAAACCCCAAAAGAGACAGAGGGTCGTACCACCGTA
AAGTTGGTCTAATATAATGTCcaacatccgtcttctaatttggacaccct
ttttaaatatttcctatctatataggaaatatttgttaaaacggtaattt
ttcttctccttcttctccttctccaagtctaacgctcggttttggtcaat
ttcgtgagtttgtacatgagtctctttttaaatcaagctccggcgataaa
aacagtaggatgttcttttttcgaggcggaagacgtcatttctccgagaa
acgtctgtggtaaataCCCGTACagcgctctattctccttgtcgatcggg
caacgtcggccgtttcagaagcgtattcTTGAttggaccatactgctttg
tttctaactgtcaaaacaaagatggcagaaaatagacatttcgctacttt
tcttcaattctttgctttggtttatatgctttgatgagttgaattggatc
atgatttttgtacgattgtcacaaggaatggtcgatagtgaaattttctt
aatattcctttctggatttgatgtttcgtttacattctgttggaatgagc
tggaatgagagatgatacATGCAACAATCtattggtcttggaaaaacagg
acattttatcaactttcacagcaaactaacttcaattttgtttgtatatt
tacataaatcgtacgaaggcaagtgactgtggataaatctgaccatggtg
tacctgaaaaattacatacttgcaatatgaaaaaagtttgcacccaacga
atgcaatgcaacaatgggaatggttgatgaactgattttagctaaaaatt
taaacatggagcaaaattgactggttaatgattgaatttcccttggtttt
tttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNcaacaatgaattaactgctggggttagtgacagttagtgaaaactcgt
tgcggttataaatttcaaattttaaagctgataaccggatccggaacacc
ggagattttcttaccgtcaactgctccaacttggccaccatttcaccgaa
cctccaaagtcattagattagagttaatgaacggcgtattaaaaaatggc
aaaacgatggagcgtttgatgttactcgcgcggcaagttatacacgcgtt
atttgttaatcccatcgggcgataggcggataggcagcgggcgttctcta
attctccaatcggtgctatcagtgaaagttatcgtgacatgttatgaaag
gaaacttttgtgaaaaatttggagattttcttacacgttcattcaaaacg
tggaaaacttttgtcgtgaacttgacattttcttccacatgcatttaaaa
aatgaagaaaactcaagtgatttcctggcatgacaatttattttattttc
tgacatttttttggaaatttcgattgtttccaagtaaatgttttttcttt
tataagcataacgtttataagcatatgcaggctcagtttttggtacccaa
acaatggctctattgtttgagaacaatagaatgctaagcataatgcgagc
ctgatgtaggggcagacacttgcttataaaaaaaaaaacatgtatgtgac
attttttgctcttgcagcatgcttttggaaatcataaaatggcttctgtt
aggggataattttttcctatcgacattctttcagattatgaaatgtttcc
aagtatataaaaatgagatttttttttttttggcattctgtcggaaaata
tgaaattgtttccctgttttgaaagatttttactttttagcacgtacatt
atttcaaaagttactttaaatttttacattttttacaatattttatatat
gaaagtataatggtCGGTTTGCGTAAAAGTGGACATGAAAAagggtcaaa
aaattttttttctgttgtttgaatttttcattgtaATGACGTTTTTTCTT
TACCTTATGGATTTAAGTTTCATATTCCGAAGCAGTCCTACGTGATTCTG
ATCTGAAAGAAAATGGCGGCTACTTCAATGTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAA
AATTtactataatttttttctaaaaagcctGGAATACCCTTTATTGATAT
TTTCCACTCCTACTACATGGTTGccatcaattttcaataaaatgtaacac
atagaaagaattataagaaaaaaattgtcaacaTATTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAAGTTCTTTGTTGTTACGT
ACGggacaaactttcaaaatactACATACACTCCTTCGCATCTCTAGGCT
CTATATATCATGAAAAACAGtcagctaaaatttcaaaccaataaCTTAAG
AAGTCAGAGAAACAGCTAGAGAAAAAACTAAAAGGGTTTCAGTGAAATCT
CAGATTACGTTTAGCGAGTCACACTATAGATATAGATTGGACTCTGTATT
ACAACCTTTTGAATTGTATTACTCCCTCACAGCTATCAATGACCCTCTCA
ATCACTCAACTGACTGAAAAAAGTTGTCTTGAAGGTAGGTGGTTGATAAC
AGCCATCATATGTTCAATAAAATTGGAAGTAAACACTAAAATATAGTTTA
GAAACAGCTGGGTATTTAATAGAAATCNCAATAAAATTGGAAGTAAACAC
TAAAATATAGTTTTAGAAACAGCTGGGTATTTAATAGAAATCTGTTGTTA
CGTACAGGACAAAGTTACGTACGGGACAAATTTTATTTCTAAgcagtttt
ttggaaaaacgaTGTAGACCCAGAGAATTTAGCAATAATTTTTAGAGAGG
CATCTGGAAAACttacaaaaaactgaaaaaaaactaatttgaaaCCAAAC
TTTCAGCGAGATATGCCCAATTCTATAGGTGTTACGTACGGGACATTCAC
GTAGAACCATCTCCAATTAGGCTCAAATCagttaaaatatcttttattCT
ATGGTTTTTAcagcaaattttaaattttaattatgATCCACAGATATCAA
TTAAGAAATCTGTATGTAAATTTTTTGTCATAATGGTTTCACAAAAGATT
ATACCAGTTCATTCAACTAAACTGTTACGTACGGGACATAAAAGCTTGAC
CGTGAAGTAAAATCTCTGCCCATTTCTCCCACTAGcacttataaataaaa
acaaggcaAAACATTTTACTTCAACCTATCCTTCATTGGATGATCCAACA
AAAGATGCCACACAACTCAAGGATTATGTTACAAATAAAGctttaaaatt
agaattttttcaaaaccgtCCCGTACGTAACGCAAAATGTCCCGTACGTA
ACGCAATATTTCCAGATTGGTACAAATTCTGGTGAAAAAATTTTACAGTG
AGATTTTGTATATTAACAGCAacctataaaaacaaaaaaccaacAAATTG
AAGCACTCTTATAATCCCTGTGGGTCAAACCGTCTCCATGTCCACTTTTA
CGCAAACCGAcctaatgcaaaatatttcatctcattttaaaaatatataa
aattttctttggttttcttactgtgaagtattctcctttttgtcattctt
tcattttaaatatttgccctttttggctatataatatttctggaaatcag
cccttaaaataataattatataatcaggtcttttgatgtgttcaacaaca
ctctacttggcggtgcgacgccgggtgaccgctagtataatactaaaatc
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTActggcaataacataaatggaattttgaaattcttag
ggacttgtgttgcttgatgttatctgagatttaaagcactttgaaatctt
ttgaggacatcaatattattttaacatttgtaaaggaaatatttatccgc
atctttgggGCTCTTGTTTATAGATAAGATGATAGAtttagtttcaatca
gcgattccgaccttcctcagtcctaattgttcctatctctaacaGCCAGG
GCCTCCGCCTTGGTCTtttataaaattagtttggatagaataaaaacata
actgatcaacacaaccaaaccttttgtcttgcgtttactctttccttccc
aacaacttttgtttttggttatgcaggttttaaaatccacaagaaATGAA
CCTCtaatagctttatctgaataaatctggttgaaaaccttttgtcaggt
tttatccacgtggtgaacagGTTTCCCTGATTTCccaataattaaaaatt
ggaactgtCCTGTGGGCGCGGgtgggcgtaccgccatcgcaaaatatttt
tcgtgaacatttaccgtattctaacgctaatataatctagataggaaaca
aatattaaatgtGAATTATCATATTATTTGAATTatattaaattaagttt
ttcgagagctttcagattctataattggttttggccaaaaatgagtttga
aatttccataaaaattggATTGGGCCCTTGGGCTCTAGCCTAGGTTTTCA
ATAAATGGGTCCAAAAATAAGGGCAATCCTTAAATTTTTTCTGGGCCGCC
CTTCTAATATCAATCCATAGGGTATTAGGCATGTCTGGTCCAAATTTGGC
GCTTTGTTCCAATTTTGcacattttttgatgttttttgttATGAACCGGG
CCTACTTTAAATGCCCCATATGacttagcctgggtatccagactcaaaat
ttcagaaaaaaagtcttacctcaacatacaaagtttatAAAATATTAGAG
TCTGtgtaactaaaaaagtctgatacagtttgtttgatattgtatgtgag
tgaacccttgttgacagaatctaaaaactttggaaacccaggcagacaca
cataattacttaccataaaatctctttttatacaaactcaaaagcctttc
aaaactactttaaactacatccaaacgtcagccacataaaggctcctttc
catcagcaattttgtttagaaatgaacctgtgttttcattttatatttgt
ttatctttttttgtaaTGTCagcttttttcataaattatgcaCGCGCATC
GTAAAATATCGAAAACACCGCaaaaaattctgctcagtgactgggcgcgt
actgaatAATTAgatacactcgcatatgcaggggcagatatccctgcaga
ggagttagttggaccagaccgtaaaccagaaacatgatcttaaaaaaact
agacaatgaaatagtttacggtctggataggGCATATGATTATATGTATG
CAAGCAGATAGAAGTTTACACAAATATTATAAAACCAACTAAGTATTTTA
AGaagaaatataaaaacaataaaagatcAAACTTCATAAtgcaaaaagaa
atacttacaaAACATTAGAAATCTGTTCTTAAAGATCATTTTCTACTGCT
TTCTGTTTCAACACCattaaaaaattcaacaaaGACAGAGTAAACGCACC
AAATTTTAAAAGCACACAAATTGAAAGTAGTATTTATGACCTCGTACTTT
CTTTCCATTgcaagaaaatatcaaaaaacctgttttgatCTACGAGTTCC
AGCACAACATTAAAAGCAAGTATTTTCCTACTATATAAATCAGAGGTTTC
AGATCATTGTTTGGATTtgaaatatgacgtcatctatTCCCAAGGGAATA
ATTTACCATCAGCCAAATAaggattattatttttttgtaccTTCACTgct
gatttttcagcttgagtttatgtctcaTATTATGATTCAATGAAGGGCTG
GTTCTAAAGAGATAAAAGAATATGATTATCTTTGGTTTTCAAGAGAATTT
TTCTCTAAATCCCAAATCAAGGTAAATGTGCACTAAAACTAAGCTACTTA
GAATCAGGGGTATGtaatagcggagctggataatgcacatttgaaaaagc
cttgacatcaagagggtctgtaaaacaaaTCGGCGAATgacaattcaaaa
aaattaaaaacattgttttcattagtaaaattataagaaattttGTCTAT
TAGATTATAAATAGCAATTTTTCAtctgaaataccgcgctacacctctgc
ctcactttctaactgatattttcagaaagtgagTCGGTATGTCTGGttat
ggaaaaaaattcaagtcaattgaaacagtatttgtcaaaatatttccatc
caaaatttttaaagaggaatTATGAAAGCTtcattcataacacacgctga
aaAGATTAGATTTCATTCGCAAGGAAgtttttggggtatcttctgcAAAT
ATTATTTCGATGAAAAgtgggaacatcatagcaaaatatgtgaaGACGTA
CTGCATGACTACtttgtcttcttcatttttcttataaaagcagaacactc
aaggggacagagatggatttctattatgaacagtttacaatagaaaagac
aaagaagcaatccgctaaggaattctcatCCAGCGCCGCTATTACATATC
CCTGTTAGAATTATATAAATGAGACTCTttttttgacagctgaaaatatt
atttaaaaattaaataaacatgGGGGTCCTAACAAGGTCTGAAAAAGTTA
ACAAGCAGGTTGTCTGTCAAGAGTAGTTTGAATGAAATAGCTGGTCTGTT
TTCAATAATAGAGACAAATCCCAAAGCTATTGAAAATTGAAGGATGGCTT
CTGGTGAAAGTGTAAATACTTCTGAATTTTATGCGCAACAAGCAAAGACT
ACTGATGATGCTGCTTCAATAGCATTTGTTGTTGGAAAGAATAAATATCC
CTTAGATGAATGGTTGAAAAGGAACAAGCCTTCAAATGTCCGTAGGTAAG
GTTggccttcaaaatttatcatggCCTGTTCACTTACAATATGCAAacag
aaaaatgttgaaaacaaTCTTACTAATCAAGTCAAGTACTTCTTAAGATG
AAAATTAGATACATAATATAAAGGAtgtataaataatgtttttcaaCTGA
CTAACCATGGCCTGAACCTAGTGCAAGATGACAGAAAACCAATATTTTAA
GACATGTTTTTCTTACTTGTCCGACTTATGATTCAGTCTTATCTATCAGT
tcaaatatcttcaaatttatCAAGCAATCCTTATTTTTATAGTTTGCATT
TTTTTAGGGATCAAGGATTTGGCTGGATCTGGGTGTTACGTCCAGAAGAT
GACAATAATGACAATAATGAAGATTTTGACCCAGATAAAATGATGGATGA
ATGGCAGAAAGTAAATGCTTCTGAAAGCATTAACATCACTAAAGAATATG
TTTTTGAACTAGCACGCAAACATAAATGTACATCAGGAGAATGGTTAGTA
ACAACCAGACCTGGTATAGAAACTGACCGACTGTGGGCTATCATTGCAAA
AGGAATTGTTAATGGGGAAACATTGGCTAGGCATGCTAAAGTGAGTGCAC
ATGAGGGACCAGATATTAGACATGTTTTCTGTATTTATAATGATAACTTT
TTAGATAAAGATCAAGTTATGGAGAATGAAAGAACAATTAGGGAATTAGG
AATCAAACGTGCTTTGACATACAAACCAGATGTTTACACATATTTAGGTA
TTTATCGAAAGAATCGCTGGAAGATTCGACCAACCATTTATACAAGCAAT
TGGGACATTTTGAAGAAAGGAACAATTATCAAAGAGACATAATTTTCATA
TCAAATAAATCATATTATTTAATATAAACCAGGGGGTTTTGATTTAGGTC
GGCCACTGTATTTCTACAACATTTAGTTTCTGACAGGTGTCATATTTTTA
TGTATAACTACATAGATATTATTAACTACATAGAGTTTACCCCCACCCCC
CCCCTC Coding sequence (CDS) from alignment at sc0000350:163797..179552+ >TCONS_00020159 ID=TCONS_00020159|Name=TCONS_00020159|organism=Clytia hemisphaerica|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000350:163797..179552+ (Clytia hemisphaerica)
ATGGCTTCTGGTGAAAGTGTAAATACTTCTGAATTTTATGCGCAACAAGC
AAAGACTACTGATGATGCTGCTTCAATAGCATTTGTTGTTGGAAAGAATA
AATATCCCTTAGATGAATGGTTGAAAAGGAACAAGCCTTCAAATGTCCGT
AGGGATCAAGGATTTGGCTGGATCTGGGTGTTACGTCCAGAAGATGACAA
TAATGACAATAATGAAGATTTTGACCCAGATAAAATGATGGATGAATGGC
AGAAAGTAAATGCTTCTGAAAGCATTAACATCACTAAAGAATATGTTTTT
GAACTAGCACGCAAACATAAATGTACATCAGGAGAATGGTTAGTAACAAC
CAGACCTGGTATAGAAACTGACCGACTGTGGGCTATCATTGCAAAAGGAA
TTGTTAATGGGGAAACATTGGCTAGGCATGCTAAAGTGAGTGCACATGAG
GGACCAGATATTAGACATGTTTTCTGTATTTATAATGATAACTTTTTAGA
TAAAGATCAAGTTATGGAGAATGAAAGAACAATTAGGGAATTAGGAATCA
AACGTGCTTTGACATACAAACCAGATGTTTACACATATTTAGGTATTTAT
CGAAAGAATCGCTGGAAGATTCGACCAACCATTTATACAAGCAATTGGGA
CATTTTGAAGAAAGGAACAATTATCAAAGAGACATAAATGGCTTCTGGTG
AAAGTGTAAATACTTCTGAATTTTATGCGCAACAAGCAAAGACTACTGAT
GATGCTGCTTCAATAGCATTTGTTGTTGGAAAGAATAAATATCCCTTAGA
TGAATGGTTGAAAAGGAACAAGCCTTCAAATGTCCGTAGGGATCAAGGAT
TTGGCTGGATCTGGGTGTTACGTCCAGAAGATGACAATAATGACAATAAT
GAAGATTTTGACCCAGATAAAATGATGGATGAATGGCAGAAAGTAAATGC
TTCTGAAAGCATTAACATCACTAAAGAATATGTTTTTGAACTAGCACGCA
AACATAAATGTACATCAGGAGAATGGTTAGTAACAACCAGACCTGGTATA
GAAACTGACCGACTGTGGGCTATCATTGCAAAAGGAATTGTTAATGGGGA
AACATTGGCTAGGCATGCTAAAGTGAGTGCACATGAGGGACCAGATATTA
GACATGTTTTCTGTATTTATAATGATAACTTTTTAGATAAAGATCAAGTT
ATGGAGAATGAAAGAACAATTAGGGAATTAGGAATCAAACGTGCTTTGAC
ATACAAACCAGATGTTTACACATATTTAGGTATTTATCGAAAGAATCGCT
GGAAGATTCGACCAACCATTTATACAAGCAATTGGGACATTTTGAAGAAA
GGAACAATTATCAAAGAGACATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020159-exon-sc0000350-1491911889:163797..164005 | TCONS_00020159-exon-sc0000350-1491911889:163797..164005 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1510915933:163797..164005 | TCONS_00020159-exon-sc0000350-1510915933:163797..164005 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1575043694:163797..164005 | TCONS_00020159-exon-sc0000350-1575043694:163797..164005 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1491911889:178358..178541 | TCONS_00020159-exon-sc0000350-1491911889:178358..178541 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1510915933:178358..178541 | TCONS_00020159-exon-sc0000350-1510915933:178358..178541 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1575043694:178358..178541 | TCONS_00020159-exon-sc0000350-1575043694:178358..178541 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1491911889:178854..179552 | TCONS_00020159-exon-sc0000350-1491911889:178854..179552 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1510915933:178854..179552 | TCONS_00020159-exon-sc0000350-1510915933:178854..179552 | Clytia hemisphaerica | exon |
| TCONS_00020159-exon-sc0000350-1575043694:178854..179552 | TCONS_00020159-exon-sc0000350-1575043694:178854..179552 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:163797..179552 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00020159 vs. Swiss-Prot (Human)
Match: CK068 (UPF0696 protein C11orf68 OS=Homo sapiens GN=C11orf68 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 7.633e-32 Identity = 75/190 (39.47%), Postives = 98/190 (51.58%), Query Frame = 2
Query: 350 LDEWLKRNKPSNVRR--DQG------FGWIWVLRXXXXXXXXXXXXXXXKMMDEWQKVNASESINITKEYVFELARKHKCTSGEWLVTTRPGIETDRLWAIIAKGIVNGETLARHAKVSAHEGPDIRHVFCIYNDNFLDKDQVMENERTIRELGIKRALTYKPDVYTYLGIYRKNRWKIRPTIYTSNWDI 895
LD WL + PS V R D G GWI V + D + W+ + S IT + +LA H SG+WL+ PG + D WA IA+ +V G+ + AKVS R V C+Y D+F D+ V+E + IR GIK LTYKPDVYTYLGIYR NRW + PT+Y S + +
Sbjct: 50 LDAWLAKYPPSQVTRYGDPGSPNSEPVGWIAVY----GQGYSPNSGDVQGLQAAWEALQTSGR-PITPGTLRQLAITHHVLSGKWLMHLAPGFKLDHAWAGIARAVVEGQL--QVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIKCLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQL 232
The following BLAST results are available for this feature:
|
