TCONS_00020159-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020159-protein
Unique NameTCONS_00020159-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020159-protein ID=TCONS_00020159-protein|Name=TCONS_00020159-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MASGESVNTSEFYAQQAKTTDDAASIAFVVGKNKYPLDEWLKRNKPSNVR
RDQGFGWIWVLRPEDDNNDNNEDFDPDKMMDEWQKVNASESINITKEYVF
ELARKHKCTSGEWLVTTRPGIETDRLWAIIAKGIVNGETLARHAKVSAHE
GPDIRHVFCIYNDNFLDKDQVMENERTIRELGIKRALTYKPDVYTYLGIY
RKNRWKIRPTIYTSNWDILKKGTIIKET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011326XLOC_011326Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020159TCONS_00020159Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015034DUF1917
IPR023398TIF_eIF4e-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015034Protein of unknown function DUF1917PFAMPF08939DUF1917coord: 95..198
e-value: 1.8E-15
score: 57.5
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10coord: 23..225
e-value: 2.1E-45
score: 154.7
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 53..215

Blast
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BLAST of TCONS_00020159-protein vs. Swiss-Prot (Human)
Match: CK068 (UPF0696 protein C11orf68 OS=Homo sapiens GN=C11orf68 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.107e-36
Identity = 76/190 (40.00%), Postives = 98/190 (51.58%), Query Frame = 0 
Query:   37 LDEWLKRNKPSNVRR--DQG------FGWIWVLRPEDDNNDNNEDFDPDKMMDEWQKVNASESINITKEYVFELARKHKCTSGEWLVTTRPGIETDRLWAIIAKGIVNGETLARHAKVSAHEGPDIRHVFCIYNDNFLDKDQVMENERTIRELGIKRALTYKPDVYTYLGIYRKNRWKIRPTIYTSNWDI 218
            LD WL +  PS V R  D G       GWI V       N      D   +   W+ +  S    IT   + +LA  H   SG+WL+   PG + D  WA IA+ +V G+   + AKVS       R V C+Y D+F D+  V+E +  IR  GIK  LTYKPDVYTYLGIYR NRW + PT+Y S + +
Sbjct:   50 LDAWLAKYPPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSG----DVQGLQAAWEALQTSGR-PITPGTLRQLAITHHVLSGKWLMHLAPGFKLDHAWAGIARAVVEGQL--QVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIKCLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQL 232
The following BLAST results are available for this feature:
BLAST of TCONS_00020159-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CK0683.107e-3640.00UPF0696 protein C11orf68 OS=Homo sapiens GN=C11orf... [more]
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