TCONS_00020134 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020134
Unique NameTCONS_00020134
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1618

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020134 ID=TCONS_00020134|Name=TCONS_00020134|organism=Clytia hemisphaerica|type=transcript|length=1618bp
GTCTTGTTCTGGATTGTGTAATATTTTCTACATGTTAAAATTAAACATAA
ATCccaaaaaaaactaacaaaactaCCTTGTGACTGCCATCACTCCAACA
ACCAACCAAGAACAGCAACCACATAACatataaacataaaaaagatGAGA
GAACTCAAACCACTTCTTGGATTGGACGATCTGAACAGCAAATCACGACT
CGTCAATATTAAGGTACATACATACGATGGCAAGGAAACATTATTAACAG
TAGCAGCAGGTGACCAGGTGAAGGCTATCAAAGAGCAATTGCTTGGTGAG
GCTGGTGCTAAAGATGTCTCCAACTACAAGGTAGTAATGTTAGCAGGGAA
CAAGGTACTGGAAGATCAACATACCATTCAACAAGAGGGCATTGTGGACG
ATGACCAGTTCTTGATTTGTCGCAAACGGAGAAGCGTCACCAGTCATTTT
CGTAAATCATTCTCTTATTCGAGTAAAGGACCTGATCTCACACTTATCAA
GAAATGTACCGAGTTTTTTGAGGAAGAAAAAGGATCAGGAGCCACCAGTC
CACCTCTTGGCTTCGCTGGCATGTTTGATTTCTTTGGTGAGTTGAAGAGA
ATCTTGGTATCGTTAACTGAAGTTGCCAGTCTGGTTCAACATGTCAATTG
CGAAGAAGGATCATCAAGTTCTGGCGGAGCCTCCTCAACGAATAGCGATG
AAATGGATACCGAAGATATTGAAATTAACGTTGACCCCTTATGTTTACAA
AAACTACTAGATATGGGTTTCGAAGAAGTACGTTCGCGCAAAGCATTACT
GCTCTCAAAGATGATTCCAATGCGTGCAATGGAATGGCTTCTGGAACATT
CGAATGACGAAGATATTGATAAACCGTTAACTTCCGATGAAATTAATACT
CTAGCGGCTGAAAATAATCCTAACGTCAAACGAAAACGAGTGCCCGGTCG
AAAGAAGGAATTCATACCGAACCCAAGATGTGTCTCGAATTTGAAAGAAA
TGGGATTCGAGGAAAAAGACATTGTAATAGCGTTAAAGATTTCGTCTAAC
AATCAAGAACGTGCCTTAGATTGGTTGCTAGGTGATAGACAAGTTCCTGA
TCGTATCCCTGACGACGGGTTGGACCCAGACTCGCCGTTGTATAGCGCCA
TTATGGATCATCCAGTCGTACAACTTGGGTTAACAAATCCTCGGATTTTA
CACGCTTTTGAGGACATGCTTGAAAATCCGAATAACAGCGGACAGTATAT
AAATGATCCGGAAATTGGACCGGTGTTATTGCAAATTTCAAGAATCGTTC
AATCGTTCTCACGATAGTTTTTTTCAATATGAAatgttgatttatttttt
gaaatcttacaaaatgttgaaaatttccatCATTTAAAGAGGGatcatat
tttaatttttttataccttgaaaattttgttttttttacatctTTGTCCA
TCATCGATTCAATTATAATTACAGTATAAGAAattgtgttttcattttct
tgttcCAGATTATTGTTgcagtttttagtttttgttttcgaAGGTTTATT
TTGAGTGTACGACACTTTTATGTTATGTTATTTGATGTATTTGAAATACC
GATGAATTAATATCAATG
Run BLAST on NCBI

protein sequence of TCONS_00020134-protein

>TCONS_00020134-protein ID=TCONS_00020134-protein|Name=TCONS_00020134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MRELKPLLGLDDLNSKSRLVNIKVHTYDGKETLLTVAAGDQVKAIKEQLL
GEAGAKDVSNYKVVMLAGNKVLEDQHTIQQEGIVDDDQFLICRKRRSVTS
HFRKSFSYSSKGPDLTLIKKCTEFFEEEKGSGATSPPLGFAGMFDFFGEL
KRILVSLTEVASLVQHVNCEEGSSSSGGASSTNSDEMDTEDIEINVDPLC
LQKLLDMGFEEVRSRKALLLSKMIPMRAMEWLLEHSNDEDIDKPLTSDEI
NTLAAENNPNVKRKRVPGRKKEFIPNPRCVSNLKEMGFEEKDIVIALKIS
SNNQERALDWLLGDRQVPDRIPDDGLDPDSPLYSAIMDHPVVQLGLTNPR
ILHAFEDMLENPNNSGQYINDPEIGPVLLQISRIVQSFSR
Run BLAST on NCBI

transcript from alignment at sc0000349:159240..166488-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020134 ID=TCONS_00020134|Name=TCONS_00020134|organism=Clytia hemisphaerica|type=transcript|length=7249bp|location=Sequence derived from alignment at sc0000349:159240..166488- (Clytia hemisphaerica)
GTCTTGTTCTGGATTGTGTAATATTTTCTACATGTTAAAATTGTAAGGTT
ATTGTTTTTTGTTGTCGTATTACTACTAGAAACAAACTCCATTTTCAAGT
TCGTTGGAGCTAAAATCCAGCAATGTATGTGTCTATATCTGCCTTTTTCT
TGGGTGAATATCAGTGACATGGTGGAAGGGAGTCAGGCCTCTCCAGTAGA
GCCCTGATGGCTAATTTTAATTTTCTTTCTTTGATTTGCTGATAATTCAA
TCCAACCTTGATCTCCTGCAGTTTTATATAGAAATTCTAACCCACATTTG
ACTAGACTACCTCAGCAGCATNGCTGATAATTCAATCCAACCTAGATCTC
CTGCAGTTTTATATAGAAATTCTAACCCACATTTGACTAGACTACCTCAG
CAGCATCAAAACAATGTTAAAGCAGACTTTGTTCTAAATCATACAATTTC
TAACCAATATTACGTTAGACACTATCATACCATGTCATGCTATGTAAACT
ATTTTATTTGGCATCAGCTCTGCTTGATTTGTTTTGTTTTATTTTGTTAA
TTGCTTTTTTAAAAGATGAGTCGATTTATTTTCTCCACAAATCAATTTTT
TTATTATTCAAACATCTAATCATGTTTGGTTAAAAAGAAGAGATATACTT
GATGCTTGTTGATGTTCTTATCAGCTATTCAGGAAACAATTGATGCCGAA
TGATGAGTGATTATTATTTACATTTTTAACATTTGGTGCTGTAAAACTGG
GTCAAATGTTCTGATTCCGACACTCGCTTTCATTTTATGATAGGTTTATC
AAATCTTGAGAGAGAAAATACTGATTATGGGGAAATTTGGAAACGCTCAT
TGAGTTGATTTGTATATTACCATGTTTTTGATATGTGAACTAACGTAGCT
AGAGTATGTAGCATATCAAAGCTCAGAATTGATAATCACCATTTAGTATT
TAAAAATTTTAATCTCTCTTTCTCGCGAACTAACAACATACGACTTGCTT
ATATCTTTCATTTAGAAACATAAATCCCAAAAAAAACTAACAAAACTACC
TTGTGACTGCCATCACTCCAACAACCAACCAAGAACAGCAACCACATAAC
ATATAAACATAAAAAAGATGAGAGAACTCAAACCACTTCTTGGATTGGAC
GATCTGAACAGCAAATCACGACTCGTCAATATTAAGGTATGTGTTTTAAA
AATCCTCTAAACCCTCGTTGGGCACCCTACTATATTCATCGTTGGGCATC
CAAATTGCAATTAAAGCAGGATCTTGGGGTTAAGGGCAAAGTTCGAGAAA
TTGATGTAGTTCTGATCTAGTTTCAAGTGCCTGATAATCTATTTTCTTTG
TTCCTAGAATGAGACAAACCCATTAAGCTGCAGTGCAAATCGACATTTTC
AGGATCTAGAGAATAGTTATCAAAGCAAATTTTTTCCCTCGTAACGAACT
TCCATCTTTGTGAAGTGTAAAAAAATCACCATATCTGCTAAAGAAGATTG
CAACATTCACCAACCTTTTCTCTCCTTCATAGGTACATACATACGATGGC
AAGGAAACATTATTAACAGTAGCAGCAGGTGACCAGGTGAAGGCTATCAA
AGAGCAATTGCTTGGTGAGGCTGGTGCTAAAGATGTCTCCAACTACAAGG
TAGGTCCCAGATGGTTGCCACATAAGTAAGTCAGCTACAATTTCCACATA
AGTAAGTCAGAACAATTTCTTACTAACTCCAGACTCGATAATCTTGTATT
TGAAGAAGAAAAAATCGAGTCTATTATTAATTCTTTGAATGTTAACAAGG
CCCATGGGTGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAGTCAGCTACCGCAGTCTGAGGATACCCAAAAGCTCCTCTTTCATTAGC
TATCTACCCGAAAGCGAAGGCGAGCCTCTTTTTCCCTGAATCTTCTCTTT
AATTACTGATAACCATTTTGTACTAAGTAAGAAATCTTTGGTATGACCCG
GCCGGGGATCGAATCCACAACTTTGCGCACCGCAGCCGAATGCTCTACCT
CTGCACTTGCCAATGACGACAATATATTTATCCACGTTTTTATAAGCTTT
GGGTAGCCTCGTTGTGCTCAGCAAAAAAAGTTTTTTGATACTTTATTGAT
GTTTATTGAGCCTCAAAATAATAGGGTTAATTGTACATTTTGCATGTTCT
CTTTAATTACTGAACACCAGGCATCAATACCATCTTGTACTAAATACGAA
GTTTTAGGTTTTAGTAAGACCCAGCTCCTTGTGGTGTTAAGTTGGAATTA
AAATTTTTCTTTTCTTTTCTTTTCACTATATTTAGGTAGTAATGTTAGCA
GGGAACAAGGTACTGGAAGATCAACATACCATTCAACAAGAGGGCATTGT
GGACGATGACCAGTTCTTGATTTGTCGCAAACGGAGAAGCGTCACCAGTC
ATTTTCGTAAATCATTCTCTTATTCGAGTAAAGGACCTGATCTCACACTT
ATCAAGAAATGTACCGAGTTTTTTGGTATGTTGGCTTTTTGTTCAGAATA
CACACTCCTGTAATATCTTCAATAACTTTAAAATACCTTAAAGTCAAGGG
AATTTATTTTGGCGAGAACTAATTTTGGTAAAGTTTGCTAAAATTTAAAA
AACTAATATTTCGCTAAAATGAATTCCTTTCCAAAATTAATGACTTTTTT
ACTTTAAAACAATACCTAATTTTGGTCTGAAACACTTATTTTTAGGCAAT
AAAGAACCGATTGCCTTGCCATTGACCTATATTAGTTCCTTTAAAATAGT
TGGTCGCTGCATTTATCACTGTGAAACGTTTTATGTCCATAACTTTAGTC
CTTGATATAATATGTACGGTGAAATACTACAGCTTTACAAGGCGTTTTGA
TTTGTAGAAGGTACATCTGGGTACACATTATAACACGGCTATTTCTAAAA
TTTGAATCTTAATTCGGTGTTCATTTTCAGAGGAAGAAAAAGGATCAGGA
GCCACCAGTCCACCTCTTGGCTTCGCTGGCATGTTTGATTTCTTTGGTGA
GTTGAAGAGAATCTTGGTATCGTTAACTGAAGTTGCCAGTCTGGTTCAAC
ATGTCAATTGCGAAGAAGGATCATCAAGTTCTGGCGGAGCCTCCTCAACG
AATAGCGATGAAATGGATACCGAAGATATTGAAATTAACGTAGGTTTTAA
ATTGAAGTCAGTTTTGTTTGATCTTTGGTTTACTGTTAAGGTTGTCATCT
TTCAAGACTCCCGTCTTGGAGGCGCGATAAGGTTTCCCACCGTGTGATTG
AGGTCATGTCATCTGAAGGGAATGACTTGCCATCTGAGGGGGACCGGGTA
CCATTCTTCACTGTGTGTGGGGAGATATTTAAGCACTTTTCGTGCTTAGT
GTCATTCAAATGTCAAGGTATATAAACATGAAACGTGGAAAACCTCGCGA
AAATGATCTTGATTCTTTTTTTTTAATGGACCTTTTCATAAATTACTTTA
GGCGTACAAACTTTCGCGAGCAGAAACTTTCGCGAGGACGAAAAATCGCG
AAATTCACGACATTTACTTTCGCGAATTTAACGGAAAAATATTTTTCGCG
AGCATAAACTTTCGCGAATGGCCCTTCCTAGAATTTTTAAAGACATTTAC
TTTCGCGAATTTAACGGAAAAATATTTTTCGCGAGCATAAACTTTCGCGA
ATCAAGACGTAAAATTGAGAATTTTCGCATGAAAAAATGGCTAAGAGATA
CAAATACTTCTTGGGTTGGCTTGAAACATTTGTCCTTTGACTTATTAGTC
TTTTTGCAGGCTAAAAAGTGCCATAAAAGTTACATTTTATTCAAAGTTTG
AAGTTTTACAGATTTTCTATTTTGTCAAGAATTTTTCGCGAGCATAAACT
TTCGCGAATGGCCCTTCCTAGAATTTTTAAAGACATTTACTTTCGCGAAA
AGGGCCAAAATTCGCGAAAATCGCAAAAGTTTCTGCTCGCAAAAGTTTCT
ACGCCTAAAGTACGTCATGAGCAACGCTTACCTTGTTTTCAAAATATTGC
TATGGTAATCGATTCCCAGAGGAGTTCATAAAATGTTTATTATATTTATA
AGGGTACAGTTGAAGACTCAAGGGATTTAAAATTACCTTATTAGTAGTTT
CAAAATGATTCAGTCGTTGCACTCAAAATGATGAAAATACCTATTATTCT
TGTTTTTCAGGTTGACCCCTTATGTTTACAAAAACTACTAGATATGGGTT
TCGAAGAAGTACGTTCGCGCAAAGCATTACTGCTCTCAAAGATGATTCCA
ATGCGTGCAATGGAATGGCTTCTGGAACATTCGAATGACGAAGATATTGA
TAAACCGTTAACTTCCGATGAAATTAATACTCTAGCGGCTGAAAATAATC
CTAACGTCAAACGAAAACGAGTGCCCGGTCGAAAGAAGGAATTCATACCG
AACCCAAGATGTGTCTCGAATTTGAAAGAAATGGGATTCGAGGAAAAAGA
CATTGTAATAGCGTTAAAGATTTCGTCTAACAATCAAGAACGTGCCTTAG
ATTGGTTGCTAGGTGATAGACAAGTTCCTGATCGTATCCCTGACGACGGG
TTGGACCCAGACTCGCCGTTGTATAGCGCCATTATGGATCATCCAGTCGT
ACAACTTGGGTTAACAAATCCTCGGATTTTACACGCTTTTGAGGACATGC
TTGAAAATCCGAATAACAGCGGACAGTATATAAATGATCCGGAAATTGGA
CCGGTGTTATTGCAAATTTCAAGAATCGTTCAATCGTTCTCACGATAGTT
TTTTTCAATATGAAATGTTGATTTATTTTTTGAAATCTTACAAAATGTTG
AAAATTTCCATCATTTAAAGAGGGATCATATTTTAATTTTTTTATACCTT
GAAAATTTTGTTTTTTTTACATCTTTGTCCATCATCGATTCAATTATAAT
TACAGTATAAGAAATTGTGTTTTCATTTTCTTGTTCCAGATTATTGTTGC
AGTTTTTAGTTTTTGTTTTCGAAGGTTTATTTTGAGTGTACGACACTTTT
ATGTTATGTTATTTGATGTATTTGAAATACCGATGAATTAATATCAATG

Coding sequence (CDS) from alignment at sc0000349:159240..166488-

>TCONS_00020134 ID=TCONS_00020134|Name=TCONS_00020134|organism=Clytia hemisphaerica|type=CDS|length=5865bp|location=Sequence derived from alignment at sc0000349:159240..166488- (Clytia hemisphaerica)
GTTGACCCCTTATGTTTACAAAAACTACTAGATATGGGTTTCGAAGAAGT
ACGTTCGCGCAAAGCATTACTGCTCTCAAAGATGATTCCAATGCGTGCAA
TGGAATGGCTTCTGGAACATTCGAATGACGAAGATATTGATAAACCGTTA
ACTTCCGATGAAATTAATACTCTAGCGGCTGAAAATAATCCTAACGTCAA
ACGAAAACGAGTGCCCGGTCGAAAGAAGGAATTCATACCGAACCCAAGAT
GTGTCTCGAATTTGAAAGAAATGGGATTCGAGGAAAAAGACATTGTAATA
GCGTTAAAGATTTCGTCTAACAATCAAGAACGTGCCTTAGATTGGTTGCT
AGGTGATAGACAAGTTCCTGATCGTATCCCTGACGACGGGTTGGACCCAG
ACTCGCCGTTGTATAGCGCCATTATGGATCATCCAGTCGTACAACTTGGG
TTAACAAATCCTCGGATTTTACACGCTTTTGAGGACATGCTTGAAAATCC
GAATAACAGCGGACAGTATATAAATGATCCGGAAATTGGACCGGTGTTAT
TGCAAATTTCAAGAATCGTTCAATCGTTCTCACGATAGAGGAAGAAAAAG
GATCAGGAGCCACCAGTCCACCTCTTGGCTTCGCTGGCATGTTTGATTTC
TTTGGTGAGTTGAAGAGAATCTTGGTATCGTTAACTGAAGTTGCCAGTCT
GGTTCAACATGTCAATTGCGAAGAAGGATCATCAAGTTCTGGCGGAGCCT
CCTCAACGAATAGCGATGAAATGGATACCGAAGATATTGAAATTAACTAA
TGTTAGCAGGGAACAAGGTACTGGAAGATCAACATACCATTCAACAAGAG
GGCATTGTGGACGATGACCAGTTCTTGATTTGTCGCAAACGGAGAAGCGT
CACCAGTCATTTTCGTAAATCATTCTCTTATTCGAGTAAAGGACCTGATC
TCACACTTATCAAGAAATGTACCGAGTTTTTTGGTACATACATACGATGG
CAAGGAAACATTATTAACAGTAGCAGCAGGTGACCAGGTGAAGGCTATCA
AAGAGCAATTGCTTGGTGAGGCTGGTGCTAAAGATGTCTCCAACTACAAG
GTAGATGAGAGAACTCAAACCACTTCTTGGATTGGACGATCTGAACAGCA
AATCACGACTCGTCAATATTAAGGTTGACCCCTTATGTTTACAAAAACTA
CTAGATATGGGTTTCGAAGAAGTACGTTCGCGCAAAGCATTACTGCTCTC
AAAGATGATTCCAATGCGTGCAATGGAATGGCTTCTGGAACATTCGAATG
ACGAAGATATTGATAAACCGTTAACTTCCGATGAAATTAATACTCTAGCG
GCTGAAAATAATCCTAACGTCAAACGAAAACGAGTGCCCGGTCGAAAGAA
GGAATTCATACCGAACCCAAGATGTGTCTCGAATTTGAAAGAAATGGGAT
TCGAGGAAAAAGACATTGTAATAGCGTTAAAGATTTCGTCTAACAATCAA
GAACGTGCCTTAGATTGGTTGCTAGGTGATAGACAAGTTCCTGATCGTAT
CCCTGACGACGGGTTGGACCCAGACTCGCCGTTGTATAGCGCCATTATGG
ATCATCCAGTCGTACAACTTGGGTTAACAAATCCTCGGATTTTACACGCT
TTTGAGGACATGCTTGAAAATCCGAATAACAGCGGACAGTATATAAATGA
TCCGGAAATTGGACCGGTGTTATTGCAAATTTCAAGAATCGTTCAATCGT
TCTCACGATAGAGGAAGAAAAAGGATCAGGAGCCACCAGTCCACCTCTTG
GCTTCGCTGGCATGTTTGATTTCTTTGGTGAGTTGAAGAGAATCTTGGTA
TCGTTAACTGAAGTTGCCAGTCTGGTTCAACATGTCAATTGCGAAGAAGG
ATCATCAAGTTCTGGCGGAGCCTCCTCAACGAATAGCGATGAAATGGATA
CCGAAGATATTGAAATTAACTAATGTTAGCAGGGAACAAGGTACTGGAAG
ATCAACATACCATTCAACAAGAGGGCATTGTGGACGATGACCAGTTCTTG
ATTTGTCGCAAACGGAGAAGCGTCACCAGTCATTTTCGTAAATCATTCTC
TTATTCGAGTAAAGGACCTGATCTCACACTTATCAAGAAATGTACCGAGT
TTTTTGGTACATACATACGATGGCAAGGAAACATTATTAACAGTAGCAGC
AGGTGACCAGGTGAAGGCTATCAAAGAGCAATTGCTTGGTGAGGCTGGTG
CTAAAGATGTCTCCAACTACAAGGTAGATGAGAGAACTCAAACCACTTCT
TGGATTGGACGATCTGAACAGCAAATCACGACTCGTCAATATTAAGGTTG
ACCCCTTATGTTTACAAAAACTACTAGATATGGGTTTCGAAGAAGTACGT
TCGCGCAAAGCATTACTGCTCTCAAAGATGATTCCAATGCGTGCAATGGA
ATGGCTTCTGGAACATTCGAATGACGAAGATATTGATAAACCGTTAACTT
CCGATGAAATTAATACTCTAGCGGCTGAAAATAATCCTAACGTCAAACGA
AAACGAGTGCCCGGTCGAAAGAAGGAATTCATACCGAACCCAAGATGTGT
CTCGAATTTGAAAGAAATGGGATTCGAGGAAAAAGACATTGTAATAGCGT
TAAAGATTTCGTCTAACAATCAAGAACGTGCCTTAGATTGGTTGCTAGGT
GATAGACAAGTTCCTGATCGTATCCCTGACGACGGGTTGGACCCAGACTC
GCCGTTGTATAGCGCCATTATGGATCATCCAGTCGTACAACTTGGGTTAA
CAAATCCTCGGATTTTACACGCTTTTGAGGACATGCTTGAAAATCCGAAT
AACAGCGGACAGTATATAAATGATCCGGAAATTGGACCGGTGTTATTGCA
AATTTCAAGAATCGTTCAATCGTTCTCACGATAGAGGAAGAAAAAGGATC
AGGAGCCACCAGTCCACCTCTTGGCTTCGCTGGCATGTTTGATTTCTTTG
GTGAGTTGAAGAGAATCTTGGTATCGTTAACTGAAGTTGCCAGTCTGGTT
CAACATGTCAATTGCGAAGAAGGATCATCAAGTTCTGGCGGAGCCTCCTC
AACGAATAGCGATGAAATGGATACCGAAGATATTGAAATTAACTAATGTT
AGCAGGGAACAAGGTACTGGAAGATCAACATACCATTCAACAAGAGGGCA
TTGTGGACGATGACCAGTTCTTGATTTGTCGCAAACGGAGAAGCGTCACC
AGTCATTTTCGTAAATCATTCTCTTATTCGAGTAAAGGACCTGATCTCAC
ACTTATCAAGAAATGTACCGAGTTTTTTGGTACATACATACGATGGCAAG
GAAACATTATTAACAGTAGCAGCAGGTGACCAGGTGAAGGCTATCAAAGA
GCAATTGCTTGGTGAGGCTGGTGCTAAAGATGTCTCCAACTACAAGGTAG
ATGAGAGAACTCAAACCACTTCTTGGATTGGACGATCTGAACAGCAAATC
ACGACTCGTCAATATTAAGGTTGACCCCTTATGTTTACAAAAACTACTAG
ATATGGGTTTCGAAGAAGTACGTTCGCGCAAAGCATTACTGCTCTCAAAG
ATGATTCCAATGCGTGCAATGGAATGGCTTCTGGAACATTCGAATGACGA
AGATATTGATAAACCGTTAACTTCCGATGAAATTAATACTCTAGCGGCTG
AAAATAATCCTAACGTCAAACGAAAACGAGTGCCCGGTCGAAAGAAGGAA
TTCATACCGAACCCAAGATGTGTCTCGAATTTGAAAGAAATGGGATTCGA
GGAAAAAGACATTGTAATAGCGTTAAAGATTTCGTCTAACAATCAAGAAC
GTGCCTTAGATTGGTTGCTAGGTGATAGACAAGTTCCTGATCGTATCCCT
GACGACGGGTTGGACCCAGACTCGCCGTTGTATAGCGCCATTATGGATCA
TCCAGTCGTACAACTTGGGTTAACAAATCCTCGGATTTTACACGCTTTTG
AGGACATGCTTGAAAATCCGAATAACAGCGGACAGTATATAAATGATCCG
GAAATTGGACCGGTGTTATTGCAAATTTCAAGAATCGTTCAATCGTTCTC
ACGATAGAGGAAGAAAAAGGATCAGGAGCCACCAGTCCACCTCTTGGCTT
CGCTGGCATGTTTGATTTCTTTGGTGAGTTGAAGAGAATCTTGGTATCGT
TAACTGAAGTTGCCAGTCTGGTTCAACATGTCAATTGCGAAGAAGGATCA
TCAAGTTCTGGCGGAGCCTCCTCAACGAATAGCGATGAAATGGATACCGA
AGATATTGAAATTAACTAATGTTAGCAGGGAACAAGGTACTGGAAGATCA
ACATACCATTCAACAAGAGGGCATTGTGGACGATGACCAGTTCTTGATTT
GTCGCAAACGGAGAAGCGTCACCAGTCATTTTCGTAAATCATTCTCTTAT
TCGAGTAAAGGACCTGATCTCACACTTATCAAGAAATGTACCGAGTTTTT
TGGTACATACATACGATGGCAAGGAAACATTATTAACAGTAGCAGCAGGT
GACCAGGTGAAGGCTATCAAAGAGCAATTGCTTGGTGAGGCTGGTGCTAA
AGATGTCTCCAACTACAAGGTAGATGAGAGAACTCAAACCACTTCTTGGA
TTGGACGATCTGAACAGCAAATCACGACTCGTCAATATTAAGGTTGACCC
CTTATGTTTACAAAAACTACTAGATATGGGTTTCGAAGAAGTACGTTCGC
GCAAAGCATTACTGCTCTCAAAGATGATTCCAATGCGTGCAATGGAATGG
CTTCTGGAACATTCGAATGACGAAGATATTGATAAACCGTTAACTTCCGA
TGAAATTAATACTCTAGCGGCTGAAAATAATCCTAACGTCAAACGAAAAC
GAGTGCCCGGTCGAAAGAAGGAATTCATACCGAACCCAAGATGTGTCTCG
AATTTGAAAGAAATGGGATTCGAGGAAAAAGACATTGTAATAGCGTTAAA
GATTTCGTCTAACAATCAAGAACGTGCCTTAGATTGGTTGCTAGGTGATA
GACAAGTTCCTGATCGTATCCCTGACGACGGGTTGGACCCAGACTCGCCG
TTGTATAGCGCCATTATGGATCATCCAGTCGTACAACTTGGGTTAACAAA
TCCTCGGATTTTACACGCTTTTGAGGACATGCTTGAAAATCCGAATAACA
GCGGACAGTATATAAATGATCCGGAAATTGGACCGGTGTTATTGCAAATT
TCAAGAATCGTTCAATCGTTCTCACGATAGAGGAAGAAAAAGGATCAGGA
GCCACCAGTCCACCTCTTGGCTTCGCTGGCATGTTTGATTTCTTTGGTGA
GTTGAAGAGAATCTTGGTATCGTTAACTGAAGTTGCCAGTCTGGTTCAAC
ATGTCAATTGCGAAGAAGGATCATCAAGTTCTGGCGGAGCCTCCTCAACG
AATAGCGATGAAATGGATACCGAAGATATTGAAATTAACTAATGTTAGCA
GGGAACAAGGTACTGGAAGATCAACATACCATTCAACAAGAGGGCATTGT
GGACGATGACCAGTTCTTGATTTGTCGCAAACGGAGAAGCGTCACCAGTC
ATTTTCGTAAATCATTCTCTTATTCGAGTAAAGGACCTGATCTCACACTT
ATCAAGAAATGTACCGAGTTTTTTGGTACATACATACGATGGCAAGGAAA
CATTATTAACAGTAGCAGCAGGTGACCAGGTGAAGGCTATCAAAGAGCAA
TTGCTTGGTGAGGCTGGTGCTAAAGATGTCTCCAACTACAAGGTAGATGA
GAGAACTCAAACCACTTCTTGGATTGGACGATCTGAACAGCAAATCACGA
CTCGTCAATATTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011310XLOC_011310Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020134-exon-sc0000349-1575043694:166447..166488TCONS_00020134-exon-sc0000349-1575043694:166447..166488Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1575043694:165303..165473TCONS_00020134-exon-sc0000349-1575043694:165303..165473Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1575043694:164836..164956TCONS_00020134-exon-sc0000349-1575043694:164836..164956Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1575043694:161814..161999TCONS_00020134-exon-sc0000349-1575043694:161814..161999Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1575043694:161150..161358TCONS_00020134-exon-sc0000349-1575043694:161150..161358Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1575043694:159240..160128TCONS_00020134-exon-sc0000349-1575043694:159240..160128Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1510915933:166447..166488TCONS_00020134-exon-sc0000349-1510915933:166447..166488Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1510915933:165303..165473TCONS_00020134-exon-sc0000349-1510915933:165303..165473Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1510915933:164836..164956TCONS_00020134-exon-sc0000349-1510915933:164836..164956Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1510915933:161814..161999TCONS_00020134-exon-sc0000349-1510915933:161814..161999Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1510915933:161150..161358TCONS_00020134-exon-sc0000349-1510915933:161150..161358Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1510915933:159240..160128TCONS_00020134-exon-sc0000349-1510915933:159240..160128Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1491911889:166447..166488TCONS_00020134-exon-sc0000349-1491911889:166447..166488Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1491911889:165303..165473TCONS_00020134-exon-sc0000349-1491911889:165303..165473Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1491911889:164836..164956TCONS_00020134-exon-sc0000349-1491911889:164836..164956Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1491911889:161814..161999TCONS_00020134-exon-sc0000349-1491911889:161814..161999Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1491911889:161150..161358TCONS_00020134-exon-sc0000349-1491911889:161150..161358Clytia hemisphaericaexon
TCONS_00020134-exon-sc0000349-1491911889:159240..160128TCONS_00020134-exon-sc0000349-1491911889:159240..160128Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020134-proteinTCONS_00020134-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000349supercontigsc0000349:159240..166488 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
131.537	128.834	87.2387	87.9713	34.8386	28.8179	46.7776	50.7631	78.1465	59.2925	162.193	174.669	344.616	420.199	173.302	139.044	82.6587	128.062	344.589	228.917	135.747	137.614	109.591	129.661	186.129	199.218	123.775	231.399	45.1905	56.5773
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006636STI1_HS-bd
IPR015940UBA
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00020134 vs. Swiss-Prot (Human)
Match: UBAC1 (Ubiquitin-associated domain-containing protein 1 OS=Homo sapiens GN=UBAC1 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.505e-64
Identity = 151/415 (36.39%), Postives = 215/415 (51.81%), Query Frame = 1 
Query:  196 RLVNIKVHTYDGKETLLTVAAGDQVKAIKEQLLGEAG------AKDVSNYKVVMLAGNKVLEDQHTIQQEGIVDDDQFLICRKRR--------SVTSHFRKSFSYSSKGPDLTLIKKCTEFFEEEKGSGATSPPLGFAGMFDFFGELKRILVSLTEVASLVQHVNCEEXXXXXXXXXXTNSDEMDTEDIEINVDPLCLQKLLDMGFEEVRSRKALLLSKMIPMRAMEWLLEHSNDEDIDKPL----------------------------TSDEINTLAAENNPNVKRKRVPGRKKEFIPNPRCVSNLKEMGFEEKDIVIALKISSNNQERALDWLLGDRQVPDRIPDDGLDPDSPLYSAIMDHPVVQLGLTNPRILHAFEDMLENPNNSGQYINDPEIGPVLLQISRIVQSFSR 1314
            +++ + +   DG E L        V+ +KE+ L           K ++++K++  A  +VL D  TI +E I D D  L+ +KR          V++  +K      K PD   I + T          A         M DF  EL++ILVSL EVA  +  +N +             ++ M  ED +  VD   L++L +MGF E R+ KAL L+ M   +AMEWL+EH+ D  ID PL                              DE+  +        K+ R   RK+EF  + R V +L EMGF+EK+++ AL++++N Q  A +WLLGDR+      D G+DPDSPL+ AI+D+PVVQLGLTNP+ L AFEDMLENP NS Q++NDPE GPV+LQISRI Q+ +R
Sbjct:   12 KVLRLHICASDGAEWLEEATEDTSVEKLKERCLKHCAHGSLEDPKSITHHKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPKMADVSAEEKKK--QDQKAPDKEAILRATANLPSYNMDRAAVQ----TNMRDFQTELRKILVSLIEVAQKLLALNPD------AVELFKKANAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNHMSVPQAMEWLIEHAEDPTIDTPLPGQAPPEAEGATAAASEAAAGASATDEEARDELTEI-------FKKIR---RKREFRADARAVISLMEMGFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPEELDKGIDPDSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNR 404
The following BLAST results are available for this feature:
BLAST of TCONS_00020134 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBAC13.505e-6436.39Ubiquitin-associated domain-containing protein 1 O... [more]
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