TCONS_00020134-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020134-protein
Unique NameTCONS_00020134-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length390

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020134-protein ID=TCONS_00020134-protein|Name=TCONS_00020134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MRELKPLLGLDDLNSKSRLVNIKVHTYDGKETLLTVAAGDQVKAIKEQLL
GEAGAKDVSNYKVVMLAGNKVLEDQHTIQQEGIVDDDQFLICRKRRSVTS
HFRKSFSYSSKGPDLTLIKKCTEFFEEEKGSGATSPPLGFAGMFDFFGEL
KRILVSLTEVASLVQHVNCEEGSSSSGGASSTNSDEMDTEDIEINVDPLC
LQKLLDMGFEEVRSRKALLLSKMIPMRAMEWLLEHSNDEDIDKPLTSDEI
NTLAAENNPNVKRKRVPGRKKEFIPNPRCVSNLKEMGFEEKDIVIALKIS
SNNQERALDWLLGDRQVPDRIPDDGLDPDSPLYSAIMDHPVVQLGLTNPR
ILHAFEDMLENPNNSGQYINDPEIGPVLLQISRIVQSFSR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011310XLOC_011310Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020134TCONS_00020134Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006636STI1_HS-bd
IPR015940UBA
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 339..378
e-value: 9.5E-5
score: 31.8
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 197..234
e-value: 0.12
score: 21.4
coord: 276..313
e-value: 1.3E-4
score: 31.3
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 276..311
e-value: 2.4E-6
score: 27.2
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 195..235
score: 10.475
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 274..314
score: 12.523
NoneNo IPR availableGENE3D1.10.8.10coord: 197..233
e-value: 4.2E-11
score: 42.3
NoneNo IPR availableGENE3D3.10.20.90coord: 9..111
e-value: 2.1E-8
score: 33.4
NoneNo IPR availableGENE3D1.10.8.10coord: 234..319
e-value: 1.3E-15
score: 57.3
NoneNo IPR availableCDDcd14304UBA2_KPC2coord: 275..313
e-value: 9.36873E-15
score: 66.8982
NoneNo IPR availableCDDcd00196UBQcoord: 23..94
e-value: 0.0059873
score: 33.653
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 20..98
score: 11.203
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 20..102
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 186..246
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 269..315

Blast
[Close]
BLAST of TCONS_00020134-protein vs. Swiss-Prot (Human)
Match: UBAC1 (Ubiquitin-associated domain-containing protein 1 OS=Homo sapiens GN=UBAC1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.183e-67
Identity = 151/415 (36.39%), Postives = 214/415 (51.57%), Query Frame = 0 
Query:   18 RLVNIKVHTYDGKETLLTVAAGDQVKAIKEQLLGEAG------AKDVSNYKVVMLAGNKVLEDQHTIQQEGIVDDDQFLICRKRR--------SVTSHFRKSFSYSSKGPDLTLIKKCTEFFEEEKGSGATSPPLGFAGMFDFFGELKRILVSLTEVASLVQHVNCEEGSSSSGGASSTNSDEMDTEDIEINVDPLCLQKLLDMGFEEVRSRKALLLSKMIPMRAMEWLLEHSNDEDIDKPL----------------------------TSDEINTLAAENNPNVKRKRVPGRKKEFIPNPRCVSNLKEMGFEEKDIVIALKISSNNQERALDWLLGDRQVPDRIPDDGLDPDSPLYSAIMDHPVVQLGLTNPRILHAFEDMLENPNNSGQYINDPEIGPVLLQISRIVQSFSR 390
            +++ + +   DG E L        V+ +KE+ L           K ++++K++  A  +VL D  TI +E I D D  L+ +KR          V++  +K      K PD   I + T          A         M DF  EL++ILVSL EVA  +  +N               ++ M  ED +  VD   L++L +MGF E R+ KAL L+ M   +AMEWL+EH+ D  ID PL                              DE+  +        K+ R   RK+EF  + R V +L EMGF+EK+++ AL++++N Q  A +WLLGDR+      D G+DPDSPL+ AI+D+PVVQLGLTNP+ L AFEDMLENP NS Q++NDPE GPV+LQISRI Q+ +R
Sbjct:   12 KVLRLHICASDGAEWLEEATEDTSVEKLKERCLKHCAHGSLEDPKSITHHKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPKMADVSAEEKKK--QDQKAPDKEAILRATANLPSYNMDRAAVQ----TNMRDFQTELRKILVSLIEVAQKLLALN------PDAVELFKKANAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNHMSVPQAMEWLIEHAEDPTIDTPLPGQAPPEAEGATAAASEAAAGASATDEEARDELTEI-------FKKIR---RKREFRADARAVISLMEMGFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPEELDKGIDPDSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNR 404
The following BLAST results are available for this feature:
BLAST of TCONS_00020134-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBAC16.183e-6736.39Ubiquitin-associated domain-containing protein 1 O... [more]
back to top