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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020060 ID=TCONS_00020060|Name=TCONS_00020060|organism=Clytia hemisphaerica|type=transcript|length=596bp
TTTTTAATACTCGTTTTCTTGCATTCTTCACAGGGAGTGGTTTAAAGCCT
GTACCATCATCCTTCTCAATCATCGCTGACTCAGATGACGAAAACCTTCC
TTACCGGGAAGTTAAGAAGAAGAAGCTCACAAACTTGGACGATTTTACAA
GCGATGACGAAATAAATGGTTGAcagggttgttttttttttacactttca
cGCAATAGCAATTTGATACGTTTTTCTTACTATTGTTGtgttatttttat
taatttgcttcatttatttattttcttcgtTTTTAGTGGGTTattcattt
ttcagaaaatttactTCTAAAATCTAGTTAGAGCTTTTGACGCAACTTCG
TGATAATCTTTGTTAAAGTTTTCGAGATCTTATTCGCTGCATACACAGTC
TCTTTTTGACCACTAGCATATTTTATATTTGGTAAGGTGTTACAATTTAA
CTATTCATATTTATTATTTAATACTTAGATAGAAAACTGATAGCTTTTGT
AAATATAGAATTAATTGAATTTTCAATGGAGAAATAATTTTGctgaagga
tatttttttaaGTATCAAGTGAAATAAATATAGTCTTTAGGTGAAT Run BLAST on NCBI transcript from alignment at sc0000348:84432..85393- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020060 ID=TCONS_00020060|Name=TCONS_00020060|organism=Clytia hemisphaerica|type=transcript|length=962bp|location=Sequence derived from alignment at sc0000348:84432..85393- (Clytia hemisphaerica)
TTTTTAATACTCGTTTTCTTGCATTCTTCACAGGGAGTGGTTTAAAGCCT
GTACCATCATCCTTCTCAATCATCGCTGACTCAGATGACGAAAACCTTCC
TTACCGGTAAATGTTATGTCTCTTATAATTCGAACTATCAACGAATATAA
TGATTCTGGTGTTCGAATGATTAGTAACTCAACCGTTTAAAAAGTTGATT
GGTAAAAAAAATAATAAAATGCAATGGGCCATTCCATATTATATGCATCT
AGGCGAGTGGACAAACAACTCCGGGGGGTAATCGGAGAAGATTCTCCAGG
GACTATTTTTTCATCTTTCCAGGGAGGGGGTAAAGGTTTATTAAAAAATT
TCAGGGGGTAAAGGTTCTGAACCCTCTACAACTTGAACGATTCATTCCAC
ACCCTTGCCGTTCGAGATGTGGAGATAAGACTTTTAAAGATTTTCAAGTA
GTTTTAAACGCATTAATTTCAGGGAAGTTAAGAAGAAGAAGCTCACAAAC
TTGGACGATTTTACAAGCGATGACGAAATAAATGGTTGACAGGGTTGTTT
TTTTTTTACACTTTCACGCAATAGCAATTTGATACGTTTTTCTTACTATT
GTTGTGTTATTTTTATTAATTTGCTTCATTTATTTATTTTCTTCGTTTTT
AGTGGGTTATTCATTTTTCAGAAAATTTACTTCTAAAATCTAGTTAGAGC
TTTTGACGCAACTTCGTGATAATCTTTGTTAAAGTTTTCGAGATCTTATT
CGCTGCATACACAGTCTCTTTTTGACCACTAGCATATTTTATATTTGGTA
AGGTGTTACAATTTAACTATTCATATTTATTATTTAATACTTAGATAGAA
AACTGATAGCTTTTGTAAATATAGAATTAATTGAATTTTCAATGGAGAAA
TAATTTTGCTGAAGGATATTTTTTTAAGTATCAAGTGAAATAAATATAGT
CTTTAGGTGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020060-exon-sc0000348-1575043694:85288..85393 | TCONS_00020060-exon-sc0000348-1575043694:85288..85393 | Clytia hemisphaerica | exon |
| TCONS_00020060-exon-sc0000348-1575043694:84432..84921 | TCONS_00020060-exon-sc0000348-1575043694:84432..84921 | Clytia hemisphaerica | exon |
| TCONS_00020060-exon-sc0000348-1510915933:85288..85393 | TCONS_00020060-exon-sc0000348-1510915933:85288..85393 | Clytia hemisphaerica | exon |
| TCONS_00020060-exon-sc0000348-1510915933:84432..84921 | TCONS_00020060-exon-sc0000348-1510915933:84432..84921 | Clytia hemisphaerica | exon |
| TCONS_00020060-exon-sc0000348-1491911889:85288..85393 | TCONS_00020060-exon-sc0000348-1491911889:85288..85393 | Clytia hemisphaerica | exon |
| TCONS_00020060-exon-sc0000348-1491911889:84432..84921 | TCONS_00020060-exon-sc0000348-1491911889:84432..84921 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348 | supercontig | sc0000348:84432..85393 - |
Blast
The following BLAST results are available for this feature:
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