TCONS_00020034 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020034
Unique NameTCONS_00020034
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1870

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020034 ID=TCONS_00020034|Name=TCONS_00020034|organism=Clytia hemisphaerica|type=transcript|length=1870bp
CCTATTCATCTTTTGAGCGATGTCAAGGATTCGTTCTGCTCTAATGATCT
TTAGCAAGATTCTTTGACTGACAAAAAATAATGAGATGTAAGCGCTGTCA
TATAATCattcttttctgattttatACAAGAGGAATGCAGTAGCTACAAA
CATACTAATGGGAGGTTGTTATGGTGTAGAGAGAGAAATGTGATGGTTAT
AAAATTTAAACATCATAGCTTTTAGAAAGGGATTGGAATTTCATGAAAAT
GGCTCAAAATCGTGTTGACAGCAACATCGTCGGAATAGCGTTGACTCGTT
GGGTAATTTTCTATCATGCTTTCCTGGTTGGACTCGAATACTCCTGTATT
TACGTTTCCTTACTATATTACCTTCAAGAATTACATGTTTATAATGCAGC
CATGTATTTCTGTGTGTTGATGAGCTGTACAAGCACCGGATCACTATTCA
TGTCTACACTCACAAAACAATTTGGAAAACTCACATCCAACATTAAATGG
TTTCTCGTTGTTCTTGCATTGATTTCGTTTGTTGGGAATCTTCTTTATAC
GAGTCATTCGTCTGTTTGGTTTTTGGTTGTGGGACGTTTGTTGTGCGGAT
TTGTTGATTCGTCTACTGATGTCATTCAAGgaaCTTTCGGGAAATTGTAC
GCAAACGAACAAAGCAGGCTGATGGATTTCGCTTCAAAATACGAACTCTT
TTACACTTGTGGATTCCTAACTGGTCCATTGTTTGTGGCGTCGCTATGGA
AATACAAAACTCACCTTGGCAACTGGAGTATTGACCGATATAATGGTGTA
GCGTTTATAATGGCGTGGTTTTTCTTGCTTGATGCTTTACTGATGATGTG
CTGTGGACAGAATTTAAACAACCTTGTGGTGGAGCAAGAAGAAGACAATA
AGGTTGATCAAGCTTTTGAAGAAGACAACAAAGAATTGACGCAAAAAACA
AACTTGGAACGCTACCTGCGATTGAAAAAGGGTAGCAccgaaaatttaat
gaaaaatgatgacgtcatcacagaCAGGCAACCTCATTGGTTGATATTAT
TGATTTTTGCACATTCTCTACTCATCAATTTCATCTGCAACACCTCCGAA
ATGCTAGTGGTCATTCTGTCAGTGCAGAGAATCAAACTTCCACCcatcaa
cttttatttcttaGTGGTGTCATGTctctttatttttatgtttggtGTGA
CCAAAGTGTGGCGGAAATTTTTCAATGACGTTACCAAGAGAGTTGCACCC
ATGCTTTTATGTGTTGCTATCTCAATTCTTTCAAACGTGCTTCTGATTGT
AATAAGCAGTACGACATTTGGTGGCTaccattttaaaacgttttGTATGT
TTCTCGTTATTTTATTGAACTCTTTGACAGCTTTCACAATCAGTCCAGCA
ACTCAGAACCTGATCGCTGTCCTGTTTCATAACGATCAACAAAGGTTCGA
ACAGGATGTTAAACGGTGGTTGATGATTTATCGTGTGTTTGGTATCTGTG
GTCTGGTACTGGCTGGCTTTATCGTGCACCATTTATGGGTCATTTATGTT
TGCTTCATTGGAatacaaattttgttttctatGACGATTTTATTGAACAA
GTCACAATTGTCATCTGAAAGTAACTGAATAGTTTTATTTCCGATTTGTA
CAATAGTATGACAGACTGGTGATGCTTGTTTTGATCATCATCTAAACTAA
AGCTACGTCTTACTAATATTTAGCTTTTTATTGTAGAATTACACCATGAA
CAAGGATGTACAAATGTAATTTATCAGAGTAAATTTTAAGTCcgttgttg
gttgttgaaaagaaattctttaattcttgcattttttccatattctaccg
ttggaaaaataaaaaaagaa
Run BLAST on NCBI

protein sequence of TCONS_00020034-protein

>TCONS_00020034-protein ID=TCONS_00020034-protein|Name=TCONS_00020034-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
MKMAQNRVDSNIVGIALTRWVIFYHAFLVGLEYSCIYVSLLYYLQELHVY
NAAMYFCVLMSCTSTGSLFMSTLTKQFGKLTSNIKWFLVVLALISFVGNL
LYTSHSSVWFLVVGRLLCGFVDSSTDVIQGTFGKLYANEQSRLMDFASKY
ELFYTCGFLTGPLFVASLWKYKTHLGNWSIDRYNGVAFIMAWFFLLDALL
MMCCGQNLNNLVVEQEEDNKVDQAFEEDNKELTQKTNLERYLRLKKGSTE
NLMKNDDVITDRQPHWLILLIFAHSLLINFICNTSEMLVVILSVQRIKLP
PINFYFLVVSCLFIFMFGVTKVWRKFFNDVTKRVAPMLLCVAISILSNVL
LIVISSTTFGGYHFKTFCMFLVILLNSLTAFTISPATQNLIAVLFHNDQQ
RFEQDVKRWLMIYRVFGICGLVLAGFIVHHLWVIYVCFIGIQILFSMTIL
LNKSQLSSESN
Run BLAST on NCBI

transcript from alignment at sc0000348:146929..153152+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020034 ID=TCONS_00020034|Name=TCONS_00020034|organism=Clytia hemisphaerica|type=transcript|length=6224bp|location=Sequence derived from alignment at sc0000348:146929..153152+ (Clytia hemisphaerica)
CCTATTCATCTTTTGAGCGATGTCAAGGATTCGTTCTGCTCTAATGATCT TTAGCAAGATTCTTTGACTGACAAAAAATAATGAGATGTAAGCGCTGTCA TATAATCattcttttctgattttatACAAGAGGAATGCAGTAGCTACAAA CATACTAATGGGAGGTTGTTATGGTGTAGAGAGAGAAATGTGATGGTTAT AAAATTTAAACATCATAGCTTTTAGAAAGGGATTGGAATTTCATGAAAAT GGCTCAAAATCGTGTTGACAGCAACATCGTCGGAATAGCGTTGACTCGTT GGGTAATTTTCTATCATGCTTTCCTGGTTGGACTCGAATACTCCTGTATT TACGTTTCCTTACTATATTACCTTCAAGAATTACATGTTTATAATGCAGC CATGTATTTCTGTGTGTTGATGAGCTGTACAAGCACCGGATCACTATTCA TGTCTACACTCACAAAACAATTTGGAAAACTCACATCCAACATTAAATGG TTTCTTGTTGTTCTTGCATTGATTTCATTTGTTGGGAATCTTCTTTACAC GAGTCATTCGTCTCTTTGGTTTTTGGTTGTNgattgattgattgattgat tgattgattgaggcgtttgcttgaaaaaaaaattatattccataataaaa aaatacatacttgaagaattcatgcagcttgataaaatttttaaggaaaa gctggaaaagcctctcaaaaatatatttaaaaaattatggtatcattatc ttactgattttcacatctcctgtttgtttgttttttctcctagtttcttt cttataacgacatatgtcatgattattattcactaaatagaccttttcta ataatgtcgcagacatcttagattgtaggcaaaatatatcNatatgctta ttatatgcttatgaatcgtACTTATGATTCATCCCGAGCCAAATCTTTag tgaaattttagaaattttgtaaaaatttgttcagactTTGGGAGCAGTga aatgtagctagccgtgggatatcttttttttacttgaccccTACCAAATC TTTtcaaacagataaaaaatgaaaacttaaaaaatatttcatgttATGCT TAagaaatctgcaaatctgagccttcacgtgcttataagcgttatgctta tataaaaaaaacatgtacttcaTATTCTAACACCATACAAAGATTTACAA AGGAGCGAGTTGTTTTGTGTTTATTATCGATACCTGTGGCTAACCTAACT TGTAAAAACCGTCCTTTATCAGTTGCATCAAAAGATAAAATTGTGTAACA GCTTTCCACTGAGAATATGTATGTGTATTGCAACTATTGAAAACATCATG TTTTCAGACTTCTGTGTTCTATACACGAGGGGATTGAAAGCTGCTTGACT GACTGAAACGGTTTCTTTCATAAGCATGACACGAGAAGATTGAGTTTGCA AAGGAGCACAAGGGTCACTTTTCCCTGTTTGAGGCTGTAACTACTACTCA TACTATTTGTGTCATTTTATGAGACTGGAAGTTTTAAATGCCCAGTTTGA TTTGACTACATACTGTATAGTTTTTAAATATCCTCAATTTCGTTTAGTTC TTATATATGGaggattcttataaaaaaataagcacaacAACGCGAGTAAT TGGTATTGCTGTTCGATATAATTACCTATTCATCGTTTGAGCGATGTCAA GGATTCGTTCTGCTCTAATGATCTTTAGCAAGATTCTTTGACTGACAAAA AATAATGAGATGTAAGTGCTGTCATATAATCATTCTTTTCTGATTGTATA CAAGAGGAATGCAGTAGCTACAAACATACTAATGGGAGGTTGTTATGGTG TAGAGAGAGAAATGTGGTGGTTATAAAATTTGTACATCATAGCTTTTAGA AAGGGATTGGAATTTCATGAAAATGGCTCAAAATCGTGTTGACAGCAACA TAGTCGGAATAGCGTTGACTCGTTGGGTAATTTTCTATCATGCTTTCCTG GTTGGACTCGAATACTCCTGTATTTACGTTTCCTTACTATATTACCTTCA AGAATTACATGTTTATAATGCAGCCATGTATTTCTGTGTGCTGATGAGTT GTACAAGCACCGGATCACTATTCATGTCTACACTCACCAAACAATTTGGA AAACTCACATCCAACATTAAATGGTTTCTCGTTGTTCTTGCATTGATTTC GTTTGTTGGGAATCTTCTTTATACGAGTCATTCGTCTGTTTGGTTTTTGG TTGTGGGACGTTTGTTGTGCGGATTTGTTGATTCGTCTACTGATGTCATT CAAGGTAAACTTTAGGAAGAACGCGACGGTCTATTGAATAGAAAATTACA CTCCGTCATATATTACTTCCCTCAGCCATTACAAACGGGGCAAATCATAT TGTCCCTAGGTAACTGCTGTgttgtaaaagaaaaattaatgataaCTAGA TATTAATattaactagtcatagctttcactaaatgccccaaCATAAAANA ATAAatccacaaggtaaccaatcagaaatagcttgttttttttcattggc tgctatatttcaacatttctctattgctactttgcctaataaacaataat caagaggatactgcgtataaaatttatcaaaaagttctgcgccatcttaa gttgggtgaaatagaaactcacttatcctagtcaaggcccgggctccact agcgtacgctgtgattgcacttctcaagcaaaatcttctatgttgttggt caaaagaaaagtagaggaatgccattgtggttcattcagatttacagtcg agaaaagttaaaatgcgccGATTACAAATGTCGCGCTATTTATATATCCA CGTGACCCTACTGGTCACGTGGTCAAACTGTCAATCATAATTTCTATTCC ACGACacgcctaaatttcttttcaagNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNactttttgagtttatagctagcgatatactttccctttatggtgttt ctgtatgactgtctgtgtacctagtctaaccaccgttaaatgccttcggg aaggtatctcctaacttagaaagccagaatttggagctatttcaccaaac cactggagcgtaagttatttaggctatcacaatacaactttacatatgcg tacattcatcttttttgtactttgccggttgttttactaagttaagaaga actttctcgagttacgaccatatgatggtatttaaagctcaagaagccct ataaacaataaaggtagttatcaataaaatgacagNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNtaaagattctggaaaaataattga aatcattgctgaagtgaacttctgactaaattacagtagttagtattcag tttcaaagacaagaaacaaaatttgacaaacaaaacactttttcaagtca atgaatcagctcatcatcataaccagtctgccattttgtttgttttgatt tgcacaagtaatattgtaattcgtgttatatcatacactgttttgatttg catttataacactcgcttttagcttttcaaagctaaatcaaaactaaaat tgtaatatgtaataatgataataccatataacgtaatatgggaaaaaccg aacatttacggaagagactaactacggacatgcttacgcgacaacaacaa caacagcaacaacaaaacaattcgcaaagttttgagattccattccaata tctatgcgtgaaactatgagtgcctcctcgtcgctacgctcctgcggggg caattaaaAGAACATCCCATTCTCCCAAACAACTAGTTGCTCTtaacact cctgtctcacagccctgtgGAAATTTTTCTCATTGCAGGAATGAAAATCT ATTGATATCCCAATGGGGGTAGAAGTTATTTGGCTCCAAGCTTCAAATAT TCAGGGGAGATGGATTAggcaattttttacattaagattcgaatggggat gaaatcagaGTCAATTTCCAAATGAGGCTGAATCTCTAGAGTATTTTTCC AACCGGGGATGAAGGTTTGGccagattttccagtggggcgggGGTCCCAG CGAAACTGTGGACACAAGTCTGTCTAGTACGATAAATCTTCCTTTTGTCA AAGGCCAGATGGGACCCACTACCCATCGGAAAAACTGTTATCGTaagaga aaagaaagaaagatctCTCTAAATCATCCTCATCTCAAAATTACGGAAAT CTATTTACACTACAATTACATTACATTTCTCGTGAAAAGCAGGCTTGAAA GATAAAGGTAGCTTTCACAATGGGTACCGTAACttagtctaatgtcgaca tccatcatctaattttgacaccctttttATTAGCTGAAATTGATGGAATG ATCaaagctatttttctttgcatagTGGTCAcggaggaataatccttttt caatcagtgtttcaaactttcatagtattcctgtctctaaaaaagggtgt cgaaattaaaCGAGAGAtatcgatattagaccaacttacggtatttaTAA ATCTTCATATTAGCTCAGTAGTTTCTCAAATCAATGATAACAGTGGTTTC AGACAGTaatttatgtgttttttttattttaaaggaaCTTTCGGGAAATT GTACGCAAACGAACAAAGCAGGCTGATGGATTTCGCTTCAAAATACGAAC TCTTTTACACTTGTGGATTCCTAACTGGTCCATTGTTTGTGGCGTCGCTA TGGAAATACAAAACTCACCTTGGCAACTGGAGTATTGACCGATATAATGG TGTAGCGTTTATAATGGCGTGGTTTTTCTTGCTTGATGCTTTACTGATGA TGTGCTGTGGACAGAATTTAAACAACCTTGTGGTGGAGCAAGAAGAAGAC AATAAGGTTGATCAAGCTTTTGAAGAAGACAACAAAGAATTGACGCAAAA AACAAACTTGGAACGCTACCTGCGATTGAAAAAGGGTAGCAccgaaaatt taatgaaaaatgatgacgtcatcacagaCAGGCAACCTCATTGGTTGATA TTATTGATTTTTGCACATTCTCTACTCATCAATTTCATCTGCAACACCTC CGAAATGCTAGTGGTCATTCTGTCAGTGCAGAGAATCAAACTTCCACCca tcaacttttatttcttaGTGGTGTCATGTctctttatttttatgtttggt GTGACCAAAGTGTGGCGGAAATTTTTCAATGACGTTACCAAGAGAGTTGC ACCCATGCTTTTATGTGTTGCTATCTCAATTCTTTCAAACGTGCTTCTGA TTGTAATAAGCAGTACGACATTTGGTGGCTaccattttaaaacgttttGT ATGTTTCTCGTTATTTTATTGAACTCTTTGACAGCTTTCACAATCAGTCC AGCAACTCAGAACCTGATCGCTGTCCTGTTTCATAACGATCAACAAAGGT TCGAACAGGATGTTAAACGGTGGTTGATGATTTATCGTGTGTTTGGTATC TGTGGTCTGGTACTGGCTGGCTTTATCGTGCACCATTTATGGGTCATTTA TGTTTGCTTCATTGGAatacaaattttgttttctatGACGATTTTATTGA ACAAGTCACAATTGTCATCTGAAAGTAACTGAATAGTTTTATTTCCGATT TGTACAATAGTATGACAGACTGGTGATGCTTGTTTTGATCATCATCTAAA CTAAAGCTACGTCTTACTAATATTTAGCTTTTTATTGTAGAATTACACCA TGAACAAGGATGTACAAATGTAATTTATCAGAGTAAATTTTAAGTCcgtt gttggttgttgaaaagaaattctttaattcttgcattttttccatattct accgttggaaaaataaaaaaagaa

Coding sequence (CDS) from alignment at sc0000348:146929..153152+

>TCONS_00020034 ID=TCONS_00020034|Name=TCONS_00020034|organism=Clytia hemisphaerica|type=CDS|length=4158bp|location=Sequence derived from alignment at sc0000348:146929..153152+ (Clytia hemisphaerica)
ATGAAAATGGCTCAAAATCGTGTTGACAGCAACATCGTCGGAATAGCGTT
GACTCGTTGGGTAATTTTCTATCATGCTTTCCTGGTTGGACTCGAATACT
CCTGTATTTACGTTTCCTTACTATATTACCTTCAAGAATTACATGTTTAT
AATGCAGCCATGTATTTCTGTGTGTTGATGAGCTGTACAAGCACCGGATC
ACTATTCATGTCTACACTCACAAAACAATTTGGAAAACTCACATCCAACA
TTAAATGGTTTCTCGTTGTTCTTGCATTGATTTCGTTTGTTGGGAATCTT
CTTTATACGAGTCATTCGTCTGTTTGGTTTTTGGTTGTGGGACGTTTGTT
GTGCGGATTTGTTGATTCGTCTACTGATGTCATTCAAGgaaCTTTCGGGA
AATTGTACGCAAACGAACAAAGCAGGCTGATGGATTTCGCTTCAAAATAC
GAACTCTTTTACACTTGTGGATTCCTAACTGGTCCATTGTTTGTGGCGTC
GCTATGGAAATACAAAACTCACCTTGGCAACTGGAGTATTGACCGATATA
ATGGTGTAGCGTTTATAATGGCGTGGTTTTTCTTGCTTGATGCTTTACTG
ATGATGTGCTGTGGACAGAATTTAAACAACCTTGTGGTGGAGCAAGAAGA
AGACAATAAGGTTGATCAAGCTTTTGAAGAAGACAACAAAGAATTGACGC
AAAAAACAAACTTGGAACGCTACCTGCGATTGAAAAAGGGTAGCAccgaa
aatttaatgaaaaatgatgacgtcatcacagaCAGGCAACCTCATTGGTT
GATATTATTGATTTTTGCACATTCTCTACTCATCAATTTCATCTGCAACA
CCTCCGAAATGCTAGTGGTCATTCTGTCAGTGCAGAGAATCAAACTTCCA
CCcatcaacttttatttcttaGTGGTGTCATGTctctttatttttatgtt
tggtGTGACCAAAGTGTGGCGGAAATTTTTCAATGACGTTACCAAGAGAG
TTGCACCCATGCTTTTATGTGTTGCTATCTCAATTCTTTCAAACGTGCTT
CTGATTGTAATAAGCAGTACGACATTTGGTGGCTaccattttaaaacgtt
ttGTATGTTTCTCGTTATTTTATTGAACTCTTTGACAGCTTTCACAATCA
GTCCAGCAACTCAGAACCTGATCGCTGTCCTGTTTCATAACGATCAACAA
AGGTTCGAACAGGATGTTAAACGGTGGTTGATGATTTATCGTGTGTTTGG
TATCTGTGGTCTGGTACTGGCTGGCTTTATCGTGCACCATTTATGGGTCA
TTTATGTTTGCTTCATTGGAatacaaattttgttttctatGACGATTTTA
TTGAACAAGTCACAATTGTCATCTGAAAGTAACTGAATGAAAATGGCTCA
AAATCGTGTTGACAGCAACATCGTCGGAATAGCGTTGACTCGTTGGGTAA
TTTTCTATCATGCTTTCCTGGTTGGACTCGAATACTCCTGTATTTACGTT
TCCTTACTATATTACCTTCAAGAATTACATGTTTATAATGCAGCCATGTA
TTTCTGTGTGTTGATGAGCTGTACAAGCACCGGATCACTATTCATGTCTA
CACTCACAAAACAATTTGGAAAACTCACATCCAACATTAAATGGTTTCTC
GTTGTTCTTGCATTGATTTCGTTTGTTGGGAATCTTCTTTATACGAGTCA
TTCGTCTGTTTGGTTTTTGGTTGTGGGACGTTTGTTGTGCGGATTTGTTG
ATTCGTCTACTGATGTCATTCAAGgaaCTTTCGGGAAATTGTACGCAAAC
GAACAAAGCAGGCTGATGGATTTCGCTTCAAAATACGAACTCTTTTACAC
TTGTGGATTCCTAACTGGTCCATTGTTTGTGGCGTCGCTATGGAAATACA
AAACTCACCTTGGCAACTGGAGTATTGACCGATATAATGGTGTAGCGTTT
ATAATGGCGTGGTTTTTCTTGCTTGATGCTTTACTGATGATGTGCTGTGG
ACAGAATTTAAACAACCTTGTGGTGGAGCAAGAAGAAGACAATAAGGTTG
ATCAAGCTTTTGAAGAAGACAACAAAGAATTGACGCAAAAAACAAACTTG
GAACGCTACCTGCGATTGAAAAAGGGTAGCAccgaaaatttaatgaaaaa
tgatgacgtcatcacagaCAGGCAACCTCATTGGTTGATATTATTGATTT
TTGCACATTCTCTACTCATCAATTTCATCTGCAACACCTCCGAAATGCTA
GTGGTCATTCTGTCAGTGCAGAGAATCAAACTTCCACCcatcaactttta
tttcttaGTGGTGTCATGTctctttatttttatgtttggtGTGACCAAAG
TGTGGCGGAAATTTTTCAATGACGTTACCAAGAGAGTTGCACCCATGCTT
TTATGTGTTGCTATCTCAATTCTTTCAAACGTGCTTCTGATTGTAATAAG
CAGTACGACATTTGGTGGCTaccattttaaaacgttttGTATGTTTCTCG
TTATTTTATTGAACTCTTTGACAGCTTTCACAATCAGTCCAGCAACTCAG
AACCTGATCGCTGTCCTGTTTCATAACGATCAACAAAGGTTCGAACAGGA
TGTTAAACGGTGGTTGATGATTTATCGTGTGTTTGGTATCTGTGGTCTGG
TACTGGCTGGCTTTATCGTGCACCATTTATGGGTCATTTATGTTTGCTTC
ATTGGAatacaaattttgttttctatGACGATTTTATTGAACAAGTCACA
ATTGTCATCTGAAAGTAACTGAATGAAAATGGCTCAAAATCGTGTTGACA
GCAACATCGTCGGAATAGCGTTGACTCGTTGGGTAATTTTCTATCATGCT
TTCCTGGTTGGACTCGAATACTCCTGTATTTACGTTTCCTTACTATATTA
CCTTCAAGAATTACATGTTTATAATGCAGCCATGTATTTCTGTGTGTTGA
TGAGCTGTACAAGCACCGGATCACTATTCATGTCTACACTCACAAAACAA
TTTGGAAAACTCACATCCAACATTAAATGGTTTCTCGTTGTTCTTGCATT
GATTTCGTTTGTTGGGAATCTTCTTTATACGAGTCATTCGTCTGTTTGGT
TTTTGGTTGTGGGACGTTTGTTGTGCGGATTTGTTGATTCGTCTACTGAT
GTCATTCAAGgaaCTTTCGGGAAATTGTACGCAAACGAACAAAGCAGGCT
GATGGATTTCGCTTCAAAATACGAACTCTTTTACACTTGTGGATTCCTAA
CTGGTCCATTGTTTGTGGCGTCGCTATGGAAATACAAAACTCACCTTGGC
AACTGGAGTATTGACCGATATAATGGTGTAGCGTTTATAATGGCGTGGTT
TTTCTTGCTTGATGCTTTACTGATGATGTGCTGTGGACAGAATTTAAACA
ACCTTGTGGTGGAGCAAGAAGAAGACAATAAGGTTGATCAAGCTTTTGAA
GAAGACAACAAAGAATTGACGCAAAAAACAAACTTGGAACGCTACCTGCG
ATTGAAAAAGGGTAGCAccgaaaatttaatgaaaaatgatgacgtcatca
cagaCAGGCAACCTCATTGGTTGATATTATTGATTTTTGCACATTCTCTA
CTCATCAATTTCATCTGCAACACCTCCGAAATGCTAGTGGTCATTCTGTC
AGTGCAGAGAATCAAACTTCCACCcatcaacttttatttcttaGTGGTGT
CATGTctctttatttttatgtttggtGTGACCAAAGTGTGGCGGAAATTT
TTCAATGACGTTACCAAGAGAGTTGCACCCATGCTTTTATGTGTTGCTAT
CTCAATTCTTTCAAACGTGCTTCTGATTGTAATAAGCAGTACGACATTTG
GTGGCTaccattttaaaacgttttGTATGTTTCTCGTTATTTTATTGAAC
TCTTTGACAGCTTTCACAATCAGTCCAGCAACTCAGAACCTGATCGCTGT
CCTGTTTCATAACGATCAACAAAGGTTCGAACAGGATGTTAAACGGTGGT
TGATGATTTATCGTGTGTTTGGTATCTGTGGTCTGGTACTGGCTGGCTTT
ATCGTGCACCATTTATGGGTCATTTATGTTTGCTTCATTGGAatacaaat
tttgttttctatGACGATTTTATTGAACAAGTCACAATTGTCATCTGAAA
GTAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011261XLOC_011261Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020034-proteinTCONS_00020034-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020034-exon-sc0000348-1491911889:146929..147412TCONS_00020034-exon-sc0000348-1491911889:146929..147412Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1510915933:146929..147412TCONS_00020034-exon-sc0000348-1510915933:146929..147412Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1575043694:146929..147412TCONS_00020034-exon-sc0000348-1575043694:146929..147412Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1491911889:149087..149232TCONS_00020034-exon-sc0000348-1491911889:149087..149232Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1510915933:149087..149232TCONS_00020034-exon-sc0000348-1510915933:149087..149232Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1575043694:149087..149232TCONS_00020034-exon-sc0000348-1575043694:149087..149232Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1491911889:151913..153152TCONS_00020034-exon-sc0000348-1491911889:151913..153152Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1510915933:151913..153152TCONS_00020034-exon-sc0000348-1510915933:151913..153152Clytia hemisphaericaexon
TCONS_00020034-exon-sc0000348-1575043694:151913..153152TCONS_00020034-exon-sc0000348-1575043694:151913..153152Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:146929..153152 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
95.7157 94.2714 65.5546 60.226 50.1702 36.2968 28.5088 26.1529 15.8457 16.5939 14.9436 19.71 27.7447 31.3161 16.7545 13.7967 16.4465 25.8202 35.7613 18.0691 27.5942 23.5845 72.5277 66.3602 12.5787 13.3248 30.6641 67.0064 35.7816 43.2291
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020034 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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