XLOC_011261 (gene) - C. hemisphaerica

Overview
NameXLOC_011261
Unique NameXLOC_011261
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:146929..153152+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011261 ID=XLOC_011261|Name=XLOC_011261|organism=Clytia hemisphaerica|type=gene|length=6224bp|location=Sequence derived from alignment at sc0000348:146929..153152+ (Clytia hemisphaerica)
CCTATTCATCTTTTGAGCGATGTCAAGGATTCGTTCTGCTCTAATGATCT
TTAGCAAGATTCTTTGACTGACAAAAAATAATGAGATGTAAGCGCTGTCA
TATAATCattcttttctgattttatACAAGAGGAATGCAGTAGCTACAAA
CATACTAATGGGAGGTTGTTATGGTGTAGAGAGAGAAATGTGATGGTTAT
AAAATTTAAACATCATAGCTTTTAGAAAGGGATTGGAATTTCATGAAAAT
GGCTCAAAATCGTGTTGACAGCAACATCGTCGGAATAGCGTTGACTCGTT
GGGTAATTTTCTATCATGCTTTCCTGGTTGGACTCGAATACTCCTGTATT
TACGTTTCCTTACTATATTACCTTCAAGAATTACATGTTTATAATGCAGC
CATGTATTTCTGTGTGTTGATGAGCTGTACAAGCACCGGATCACTATTCA
TGTCTACACTCACAAAACAATTTGGAAAACTCACATCCAACATTAAATGG
TTTCTTGTTGTTCTTGCATTGATTTCATTTGTTGGGAATCTTCTTTACAC
GAGTCATTCGTCTCTTTGGTTTTTGGTTGTNgattgattgattgattgat
tgattgattgaggcgtttgcttgaaaaaaaaattatattccataataaaa
aaatacatacttgaagaattcatgcagcttgataaaatttttaaggaaaa
gctggaaaagcctctcaaaaatatatttaaaaaattatggtatcattatc
ttactgattttcacatctcctgtttgtttgttttttctcctagtttcttt
cttataacgacatatgtcatgattattattcactaaatagaccttttcta
ataatgtcgcagacatcttagattgtaggcaaaatatatcNatatgctta
ttatatgcttatgaatcgtACTTATGATTCATCCCGAGCCAAATCTTTag
tgaaattttagaaattttgtaaaaatttgttcagactTTGGGAGCAGTga
aatgtagctagccgtgggatatcttttttttacttgaccccTACCAAATC
TTTtcaaacagataaaaaatgaaaacttaaaaaatatttcatgttATGCT
TAagaaatctgcaaatctgagccttcacgtgcttataagcgttatgctta
tataaaaaaaacatgtacttcaTATTCTAACACCATACAAAGATTTACAA
AGGAGCGAGTTGTTTTGTGTTTATTATCGATACCTGTGGCTAACCTAACT
TGTAAAAACCGTCCTTTATCAGTTGCATCAAAAGATAAAATTGTGTAACA
GCTTTCCACTGAGAATATGTATGTGTATTGCAACTATTGAAAACATCATG
TTTTCAGACTTCTGTGTTCTATACACGAGGGGATTGAAAGCTGCTTGACT
GACTGAAACGGTTTCTTTCATAAGCATGACACGAGAAGATTGAGTTTGCA
AAGGAGCACAAGGGTCACTTTTCCCTGTTTGAGGCTGTAACTACTACTCA
TACTATTTGTGTCATTTTATGAGACTGGAAGTTTTAAATGCCCAGTTTGA
TTTGACTACATACTGTATAGTTTTTAAATATCCTCAATTTCGTTTAGTTC
TTATATATGGaggattcttataaaaaaataagcacaacAACGCGAGTAAT
TGGTATTGCTGTTCGATATAATTACCTATTCATCGTTTGAGCGATGTCAA
GGATTCGTTCTGCTCTAATGATCTTTAGCAAGATTCTTTGACTGACAAAA
AATAATGAGATGTAAGTGCTGTCATATAATCATTCTTTTCTGATTGTATA
CAAGAGGAATGCAGTAGCTACAAACATACTAATGGGAGGTTGTTATGGTG
TAGAGAGAGAAATGTGGTGGTTATAAAATTTGTACATCATAGCTTTTAGA
AAGGGATTGGAATTTCATGAAAATGGCTCAAAATCGTGTTGACAGCAACA
TAGTCGGAATAGCGTTGACTCGTTGGGTAATTTTCTATCATGCTTTCCTG
GTTGGACTCGAATACTCCTGTATTTACGTTTCCTTACTATATTACCTTCA
AGAATTACATGTTTATAATGCAGCCATGTATTTCTGTGTGCTGATGAGTT
GTACAAGCACCGGATCACTATTCATGTCTACACTCACCAAACAATTTGGA
AAACTCACATCCAACATTAAATGGTTTCTCGTTGTTCTTGCATTGATTTC
GTTTGTTGGGAATCTTCTTTATACGAGTCATTCGTCTGTTTGGTTTTTGG
TTGTGGGACGTTTGTTGTGCGGATTTGTTGATTCGTCTACTGATGTCATT
CAAGGTAAACTTTAGGAAGAACGCGACGGTCTATTGAATAGAAAATTACA
CTCCGTCATATATTACTTCCCTCAGCCATTACAAACGGGGCAAATCATAT
TGTCCCTAGGTAACTGCTGTgttgtaaaagaaaaattaatgataaCTAGA
TATTAATattaactagtcatagctttcactaaatgccccaaCATAAAANA
ATAAatccacaaggtaaccaatcagaaatagcttgttttttttcattggc
tgctatatttcaacatttctctattgctactttgcctaataaacaataat
caagaggatactgcgtataaaatttatcaaaaagttctgcgccatcttaa
gttgggtgaaatagaaactcacttatcctagtcaaggcccgggctccact
agcgtacgctgtgattgcacttctcaagcaaaatcttctatgttgttggt
caaaagaaaagtagaggaatgccattgtggttcattcagatttacagtcg
agaaaagttaaaatgcgccGATTACAAATGTCGCGCTATTTATATATCCA
CGTGACCCTACTGGTCACGTGGTCAAACTGTCAATCATAATTTCTATTCC
ACGACacgcctaaatttcttttcaagNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNactttttgagtttatagctagcgatatactttccctttatggtgttt
ctgtatgactgtctgtgtacctagtctaaccaccgttaaatgccttcggg
aaggtatctcctaacttagaaagccagaatttggagctatttcaccaaac
cactggagcgtaagttatttaggctatcacaatacaactttacatatgcg
tacattcatcttttttgtactttgccggttgttttactaagttaagaaga
actttctcgagttacgaccatatgatggtatttaaagctcaagaagccct
ataaacaataaaggtagttatcaataaaatgacagNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtaaagattctggaaaaataattga
aatcattgctgaagtgaacttctgactaaattacagtagttagtattcag
tttcaaagacaagaaacaaaatttgacaaacaaaacactttttcaagtca
atgaatcagctcatcatcataaccagtctgccattttgtttgttttgatt
tgcacaagtaatattgtaattcgtgttatatcatacactgttttgatttg
catttataacactcgcttttagcttttcaaagctaaatcaaaactaaaat
tgtaatatgtaataatgataataccatataacgtaatatgggaaaaaccg
aacatttacggaagagactaactacggacatgcttacgcgacaacaacaa
caacagcaacaacaaaacaattcgcaaagttttgagattccattccaata
tctatgcgtgaaactatgagtgcctcctcgtcgctacgctcctgcggggg
caattaaaAGAACATCCCATTCTCCCAAACAACTAGTTGCTCTtaacact
cctgtctcacagccctgtgGAAATTTTTCTCATTGCAGGAATGAAAATCT
ATTGATATCCCAATGGGGGTAGAAGTTATTTGGCTCCAAGCTTCAAATAT
TCAGGGGAGATGGATTAggcaattttttacattaagattcgaatggggat
gaaatcagaGTCAATTTCCAAATGAGGCTGAATCTCTAGAGTATTTTTCC
AACCGGGGATGAAGGTTTGGccagattttccagtggggcgggGGTCCCAG
CGAAACTGTGGACACAAGTCTGTCTAGTACGATAAATCTTCCTTTTGTCA
AAGGCCAGATGGGACCCACTACCCATCGGAAAAACTGTTATCGTaagaga
aaagaaagaaagatctCTCTAAATCATCCTCATCTCAAAATTACGGAAAT
CTATTTACACTACAATTACATTACATTTCTCGTGAAAAGCAGGCTTGAAA
GATAAAGGTAGCTTTCACAATGGGTACCGTAACttagtctaatgtcgaca
tccatcatctaattttgacaccctttttATTAGCTGAAATTGATGGAATG
ATCaaagctatttttctttgcatagTGGTCAcggaggaataatccttttt
caatcagtgtttcaaactttcatagtattcctgtctctaaaaaagggtgt
cgaaattaaaCGAGAGAtatcgatattagaccaacttacggtatttaTAA
ATCTTCATATTAGCTCAGTAGTTTCTCAAATCAATGATAACAGTGGTTTC
AGACAGTaatttatgtgttttttttattttaaaggaaCTTTCGGGAAATT
GTACGCAAACGAACAAAGCAGGCTGATGGATTTCGCTTCAAAATACGAAC
TCTTTTACACTTGTGGATTCCTAACTGGTCCATTGTTTGTGGCGTCGCTA
TGGAAATACAAAACTCACCTTGGCAACTGGAGTATTGACCGATATAATGG
TGTAGCGTTTATAATGGCGTGGTTTTTCTTGCTTGATGCTTTACTGATGA
TGTGCTGTGGACAGAATTTAAACAACCTTGTGGTGGAGCAAGAAGAAGAC
AATAAGGTTGATCAAGCTTTTGAAGAAGACAACAAAGAATTGACGCAAAA
AACAAACTTGGAACGCTACCTGCGATTGAAAAAGGGTAGCAccgaaaatt
taatgaaaaatgatgacgtcatcacagaCAGGCAACCTCATTGGTTGATA
TTATTGATTTTTGCACATTCTCTACTCATCAATTTCATCTGCAACACCTC
CGAAATGCTAGTGGTCATTCTGTCAGTGCAGAGAATCAAACTTCCACCca
tcaacttttatttcttaGTGGTGTCATGTctctttatttttatgtttggt
GTGACCAAAGTGTGGCGGAAATTTTTCAATGACGTTACCAAGAGAGTTGC
ACCCATGCTTTTATGTGTTGCTATCTCAATTCTTTCAAACGTGCTTCTGA
TTGTAATAAGCAGTACGACATTTGGTGGCTaccattttaaaacgttttGT
ATGTTTCTCGTTATTTTATTGAACTCTTTGACAGCTTTCACAATCAGTCC
AGCAACTCAGAACCTGATCGCTGTCCTGTTTCATAACGATCAACAAAGGT
TCGAACAGGATGTTAAACGGTGGTTGATGATTTATCGTGTGTTTGGTATC
TGTGGTCTGGTACTGGCTGGCTTTATCGTGCACCATTTATGGGTCATTTA
TGTTTGCTTCATTGGAatacaaattttgttttctatGACGATTTTATTGA
ACAAGTCACAATTGTCATCTGAAAGTAACTGAATAGTTTTATTTCCGATT
TGTACAATAGTATGACAGACTGGTGATGCTTGTTTTGATCATCATCTAAA
CTAAAGCTACGTCTTACTAATATTTAGCTTTTTATTGTAGAATTACACCA
TGAACAAGGATGTACAAATGTAATTTATCAGAGTAAATTTTAAGTCcgtt
gttggttgttgaaaagaaattctttaattcttgcattttttccatattct
accgttggaaaaataaaaaaagaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020034TCONS_00020034Clytia hemisphaericatranscript
TCONS_00020035TCONS_00020035Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020034-proteinTCONS_00020034-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:146929..153152 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
102.8	100.16	67.69	61.68	55.78	40.43	29.37	28.14	19.14	20.25	21.18	24.72	32.31	38.79	17.96	14.19	17.02	26.9	38.47	19.75	28.78	25.69	78	71.24	14.63	16.15	32.96	78.07	37.44	44.95