TCONS_00019992 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019992
Unique NameTCONS_00019992
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1373

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019992 ID=TCONS_00019992|Name=TCONS_00019992|organism=Clytia hemisphaerica|type=transcript|length=1373bp
GAAGCCGTTCGATTGGTTTGTGCTGGTATCGGCTACCCGACGCCGTCTGT
CAGTTTTTATCGGGCGCCACAGAGCCTGACTGACTACGAAGACTTCGTAG
AACAACTTGCTCCTTTCAATCGAGAAGTGCTGAGGAAAGAATTTGAACTC
ATACAAAAGAATGctACTGAAGGTGTTATTCCGGTCGGCGACAATTTCCG
ACAAATGCGACGTCTTCTCAAAATACGCGTCGACGGGCAGCAACAACGAC
TTGTGACGGTTGGTCAACTTTTCGCTTCAAAGATCGAAGTTCAAAGTAGC
GGTTTGTACACGTGTCGAAGCAAAAACAAAGCTGGATCAGCATCGAAAAG
CATGCATCTTTATGTGCACCCAAAACAAGAGCGCAGatTCGGTGGAGTTT
GGGTGGCGCTCAATTACGGAGAATGCAAAGGCCCGTGTGCTCGTGCTAAT
TACGCCACAAAAGGGCGTAACGTGTATTGTATGTCGCCCGGTGGTCACGT
GATTAGTAATATAAAATGCAATCCTGAGAAAAAACCTCCGTTGACGAAAG
AATGCTCTTCGAAAGAATGCATCACTGAATGGGCAATTGAACCGTGGTCC
GAGTGTTCGAGGACATGCGGACGCAATGGGAAACAATATCGTTCACCACG
ATGTATATACAGTAAGACAGGCAAGACAGTGTCTTCACAGAATTGTCCAC
ATGAAACGAAACCTGAAGCAAGGAGAGAATGCAATAACTTCCCATGCAAT
GAAAttcAATGCGTGGACAAGTATCAATACTGTAAATTGGTTTCTGGGAT
GGGTTTTTGCGAAGTAGAGATGTACAAATCACATTGTTGTCAAAGTTGCG
TTCGTGATAGAGGGAGATGGGGTAAACATTAATCAAACATTACCATGGTG
ATATacttttcagaattaaaatacattgtttttggagaaaatgattttcg
acATGTAATCAACATGTAACCCAGCTGGCATATGGACGTtacatggacgt
tgtgaacattagatggacgttgaaacaacgtcgtgtgtcagctggggatt
tgaaattttttgccaaaacagCGAATACTGATGAAGAATAGTCAATTCGT
TAAAGCTTCTTAAATGGTGTTTGGGCTGTCTTTGGCGTTTAGGAGTGAGT
TAATGTGTTCTCATTCCCCCGAAAAGCAGACCCTTAAAAGAACGCTGACA
ATATACAAGGTGTTATGAGTgcaatttgaaaaactttgacgAAAAGCATT
CCAGGTTTAccaaagaaatatttattttgtttttatagaaaattagAGAT
ATAAATATGAATGataaatcaattattttttgtgagaataattttttgaa
aatatgcaatttttataaCTTAA
Run BLAST on NCBI

protein sequence of TCONS_00019992-protein

>TCONS_00019992-protein ID=TCONS_00019992-protein|Name=TCONS_00019992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
EAVRLVCAGIGYPTPSVSFYRAPQSLTDYEDFVEQLAPFNREVLRKEFEL
IQKNATEGVIPVGDNFRQMRRLLKIRVDGQQQRLVTVGQLFASKIEVQSS
GLYTCRSKNKAGSASKSMHLYVHPKQERRFGGVWVALNYGECKGPCARAN
YATKGRNVYCMSPGGHVISNIKCNPEKKPPLTKECSSKECITEWAIEPWS
ECSRTCGRNGKQYRSPRCIYSKTGKTVSSQNCPHETKPEARRECNNFPCN
EIQCVDKYQYCKLVSGMGFCEVEMYKSHCCQSCVRDRGRWGKH
Run BLAST on NCBI

transcript from alignment at sc0000345:102214..105381-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019992 ID=TCONS_00019992|Name=TCONS_00019992|organism=Clytia hemisphaerica|type=transcript|length=3168bp|location=Sequence derived from alignment at sc0000345:102214..105381- (Clytia hemisphaerica)
GAAGCCGTTCGATTGGTTTGTGCTGGTATCGGCTACCCGACGCCGTCTGT
CAGTTTTTATCGGGCGCCACAGAGCCTGACTGACTACGAAGACTTCGTAG
AACAACTTGCTCCTTTCAATCGAGAAGTGCTGAGGAAAGAATTTGAACTC
ATACAAAAGAATGGTATGTGATGATTTGTTTATTGATAGAAAATCAACAA
AATATACTCAGACGGTGAGTCAGGGAAAAAAATCCAACATATGTCAAGAT
GAACCCTCTTCTATGTTTTTCTTAAGCACAGCGCATATGAATGCTCAGAT
TTCCTAAGCATGACTTGAGCAAAAATGACGTGTCCCGAAAAAAAGTATCG
AGTTCGAACATGATTCTGAGTAGAATGTTGTTGCGTGTGTTTAACAAAAT
GTAAGAAAATATATACCATACCATTTAGTGAAACACACACAAGAACATTC
TTTCTATAGAATTGGTACGACTCGATACTTTGTTCCAGACGCCTTATCAC
GTATACGCCAGCCTGAAATATTTTCAAGTCGTCAATTTTTTTCTGTTCCA
GCACACAGTATATCGTTAAAAAAATTTGGAAGTGATCAAGTACATGGTGT
ACTGCTTCTAAACAATTCCCCAAGCTATACAGTAATTCAGCATATAAATA
AGCATATACCATATAGCAAAGTAACCATTTCATAAGCATGTAATAAACTT
AATCATACACTTTCCTGGTCATAGGGGTAGGCACTTGATTATAAAAAACA
TGTAATTTGAGTTAATAATAACAGTCGACTTAAATTTCTTTTATAAGCTA
CTGAAGGTGTTATTCCGGTCGGCGACAATTTCCGACAAATGCGACGTCTT
CTCAAAATACGCGTCGACGGGCAGCAACAACGACTTGTGACGGTTGGTCA
ACTTTTCGCTTCAAAGATCGAAGTTCAAAGTAGCGGTTTGTACACGTGTC
GAAGCAAAAACAAAGCTGGATCAGCATCGAAAAGCATGCATCTTTATGTG
CACCCAAAACAAGAGCGCAGATGTAATTCTTTTAATAATTCTTTTATTGA
TTCCCTTATTTGTTTTTCTGAAATTCAGTGAACATCTCTAACAGGTCAAT
GGCAGATATAGAAAAGACTCGCCGTATTTTCTTGTTAATGACCTTCGATC
ATTCCGGGCCTTATCAAATGTATTTCCCTCACTCCCCAGCTGCGAATCTG
TTACGGAGATTCAAACGAATGCCAAGAATATTCTGAAAAATTATGATAAA
CGCTAAAACGCTAAAATTAGTACGTTTAGACTGTAACTCAATTTCAATCA
ATATTTTGATTTTCACTTTCTCACTTTAGTCGGTGGAGTTTGGGTGGCGC
TCAATTACGGAGAATGCAAAGGCCCGTGTGCTCGTGCTAATTACGCCACA
AAAGGGCGTAACGTGTATTGTATGTCGCCCGGTGGTCACGTGATTAGTAA
TATAAAATGCAATCCTGAGAAAAAACCTCCGTTGACGAAAGAATGCTCTT
CGAAAGAATGCATCACTGAATGGGCAATTGAACCGTGGTCCGAGGTCAGT
TAATTTCATTTCTAGTGTTGGTTTTACCAAAGGTGCCAAACAACGTTGCT
ACCTTTTTTTACTCTATTTTGGTATAGTGTAGTTTCGCCATTGTGTTACT
TATTCGACTATTCGAAACGATAAACCTTGTTGCGACCAATCGTTTTCTAC
TCCTTTAAAGTGTTCGTTTATTTAGGTTAAACTTTGCTTTCCAGGGATGC
GTTATGAGTCTAAGTTAATCGTAGTCTTGTCCAAATAAATATAAAGTCAA
AAATTCCTTTTCCACTTCTTTAAGTGTTCGAGGACATGCGGACGCAATGG
GAAACAATATCGTTCACCACGATGTATATACAGTAAGACAGGCAAGACAG
TGTCTTCACAGAATTGTCCACATGAAACGAAACCTGAAGCAAGGAGAGAA
TGCAATAACTTCCCATGCAATGAAAGTATGTTAACGTTTATTTCAAAGTC
CTTACTTTTGGTCCCAAACCCCAAAAGAACTCTGGAAATTTCTGAAAAAG
GGTCGCAAATTCAATAAATTTGAAAAATTATACGCATCTAACAGGGTTAA
TTTTGGTAATTCTCACAACTTTTCATTGTGAGTTTTAGAAATAAAAGAAA
GCGTGTACCTTGAGAGGAACCAATAGACGATATCGGACTTAGATAAATGC
AATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATTATAATCTATTATAA
TTGATCTATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCATTGC
ATTTATCTAAATCCGATATCGTCTATTATGTCAAGTACAATTTTCCTCTG
AGAGAGGTTTCAACAATATGGTCTTTTTTTCCAACTAATTTACACCCACG
TCAAGGGGTTAATAAAACCCCTCGCCTCGGGCTTACTCCCATTTACCGGC
CTTTGCTTACTTATCAATTTTAATTTACAAGCTTTTTTACATTGGATTGA
CACGGATGTGGAGCAAGATTTTACGAAAACCTTTTTTATTTATTTTCAGT
TCAATGCGTGGACAAGTATCAATACTGTAAATTGGTTTCTGGGATGGGTT
TTTGCGAAGTAGAGATGTACAAATCACATTGTTGTCAAAGTTGCGTTCGT
GATAGAGGGAGATGGGGTAAACATTAATCAAACATTACCATGGTGATATA
CTTTTCAGAATTAAAATACATTGTTTTTGGAGAAAATGATTTTCGACATG
TAATCAACATGTAACCCAGCTGGCATATGGACGTTACATGGACGTTGTGA
ACATTAGATGGACGTTGAAACAACGTCGTGTGTCAGCTGGGGATTTGAAA
TTTTTTGCCAAAACAGCGAATACTGATGAAGAATAGTCAATTCGTTAAAG
CTTCTTAAATGGTGTTTGGGCTGTCTTTGGCGTTTAGGAGTGAGTTAATG
TGTTCTCATTCCCCCGAAAAGCAGACCCTTAAAAGAACGCTGACAATATA
CAAGGTGTTATGAGTGCAATTTGAAAAACTTTGACGAAAAGCATTCCAGG
TTTACCAAAGAAATATTTATTTTGTTTTTATAGAAAATTAGAGATATAAA
TATGAATGATAAATCAATTATTTTTTGTGAGAATAATTTTTTGAAAATAT
GCAATTTTTATAACTTAA

Coding sequence (CDS) from alignment at sc0000345:102214..105381-

>TCONS_00019992 ID=TCONS_00019992|Name=TCONS_00019992|organism=Clytia hemisphaerica|type=CDS|length=4410bp|location=Sequence derived from alignment at sc0000345:102214..105381- (Clytia hemisphaerica)
TTCAATGCGTGGACAAGTATCAATACTGTAAATTGGTTTCTGGGATGGGT
TTTTGCGAAGTAGAGATGTACAAATCACATTGTTGTCAAAGTTGCGTTCG
TGATAGAGGGAGATGGGGTAAACATTAATGTTCGAGGACATGCGGACGCA
ATGGGAAACAATATCGTTCACCACGATGTATATACAGTAAGACAGGCAAG
ACAGTGTCTTCACAGAATTGTCCACATGAAACGAAACCTGAAGCAAGGAG
AGAATGCAATAACTTCCCATGCAATGAAATCGGTGGAGTTTGGGTGGCGC
TCAATTACGGAGAATGCAAAGGCCCGTGTGCTCGTGCTAATTACGCCACA
AAAGGGCGTAACGTGTATTGTATGTCGCCCGGTGGTCACGTGATTAGTAA
TATAAAATGCAATCCTGAGAAAAAACCTCCGTTGACGAAAGAATGCTCTT
CGAAAGAATGCATCACTGAATGGGCAATTGAACCGTGGTCCGAGCTACTG
AAGGTGTTATTCCGGTCGGCGACAATTTCCGACAAATGCGACGTCTTCTC
AAAATACGCGTCGACGGGCAGCAACAACGACTTGTGACGGTTGGTCAACT
TTTCGCTTCAAAGATCGAAGTTCAAAGTAGCGGTTTGTACACGTGTCGAA
GCAAAAACAAAGCTGGATCAGCATCGAAAAGCATGCATCTTTATGTGCAC
CCAAAACAAGAGCGCAGATGAAGCCGTTCGATTGGTTTGTGCTGGTATCG
GCTACCCGACGCCGTCTGTCAGTTTTTATCGGGCGCCACAGAGCCTGACT
GACTACGAAGACTTCGTAGAACAACTTGCTCCTTTCAATCGAGAAGTGCT
GAGGAAAGAATTTGAACTCATACAAAAGAATGTTCAATGCGTGGACAAGT
ATCAATACTGTAAATTGGTTTCTGGGATGGGTTTTTGCGAAGTAGAGATG
TACAAATCACATTGTTGTCAAAGTTGCGTTCGTGATAGAGGGAGATGGGG
TAAACATTAATGTTCGAGGACATGCGGACGCAATGGGAAACAATATCGTT
CACCACGATGTATATACAGTAAGACAGGCAAGACAGTGTCTTCACAGAAT
TGTCCACATGAAACGAAACCTGAAGCAAGGAGAGAATGCAATAACTTCCC
ATGCAATGAAATCGGTGGAGTTTGGGTGGCGCTCAATTACGGAGAATGCA
AAGGCCCGTGTGCTCGTGCTAATTACGCCACAAAAGGGCGTAACGTGTAT
TGTATGTCGCCCGGTGGTCACGTGATTAGTAATATAAAATGCAATCCTGA
GAAAAAACCTCCGTTGACGAAAGAATGCTCTTCGAAAGAATGCATCACTG
AATGGGCAATTGAACCGTGGTCCGAGCTACTGAAGGTGTTATTCCGGTCG
GCGACAATTTCCGACAAATGCGACGTCTTCTCAAAATACGCGTCGACGGG
CAGCAACAACGACTTGTGACGGTTGGTCAACTTTTCGCTTCAAAGATCGA
AGTTCAAAGTAGCGGTTTGTACACGTGTCGAAGCAAAAACAAAGCTGGAT
CAGCATCGAAAAGCATGCATCTTTATGTGCACCCAAAACAAGAGCGCAGA
TGAAGCCGTTCGATTGGTTTGTGCTGGTATCGGCTACCCGACGCCGTCTG
TCAGTTTTTATCGGGCGCCACAGAGCCTGACTGACTACGAAGACTTCGTA
GAACAACTTGCTCCTTTCAATCGAGAAGTGCTGAGGAAAGAATTTGAACT
CATACAAAAGAATGTTCAATGCGTGGACAAGTATCAATACTGTAAATTGG
TTTCTGGGATGGGTTTTTGCGAAGTAGAGATGTACAAATCACATTGTTGT
CAAAGTTGCGTTCGTGATAGAGGGAGATGGGGTAAACATTAATGTTCGAG
GACATGCGGACGCAATGGGAAACAATATCGTTCACCACGATGTATATACA
GTAAGACAGGCAAGACAGTGTCTTCACAGAATTGTCCACATGAAACGAAA
CCTGAAGCAAGGAGAGAATGCAATAACTTCCCATGCAATGAAATCGGTGG
AGTTTGGGTGGCGCTCAATTACGGAGAATGCAAAGGCCCGTGTGCTCGTG
CTAATTACGCCACAAAAGGGCGTAACGTGTATTGTATGTCGCCCGGTGGT
CACGTGATTAGTAATATAAAATGCAATCCTGAGAAAAAACCTCCGTTGAC
GAAAGAATGCTCTTCGAAAGAATGCATCACTGAATGGGCAATTGAACCGT
GGTCCGAGCTACTGAAGGTGTTATTCCGGTCGGCGACAATTTCCGACAAA
TGCGACGTCTTCTCAAAATACGCGTCGACGGGCAGCAACAACGACTTGTG
ACGGTTGGTCAACTTTTCGCTTCAAAGATCGAAGTTCAAAGTAGCGGTTT
GTACACGTGTCGAAGCAAAAACAAAGCTGGATCAGCATCGAAAAGCATGC
ATCTTTATGTGCACCCAAAACAAGAGCGCAGATGAAGCCGTTCGATTGGT
TTGTGCTGGTATCGGCTACCCGACGCCGTCTGTCAGTTTTTATCGGGCGC
CACAGAGCCTGACTGACTACGAAGACTTCGTAGAACAACTTGCTCCTTTC
AATCGAGAAGTGCTGAGGAAAGAATTTGAACTCATACAAAAGAATGTTCA
ATGCGTGGACAAGTATCAATACTGTAAATTGGTTTCTGGGATGGGTTTTT
GCGAAGTAGAGATGTACAAATCACATTGTTGTCAAAGTTGCGTTCGTGAT
AGAGGGAGATGGGGTAAACATTAATGTTCGAGGACATGCGGACGCAATGG
GAAACAATATCGTTCACCACGATGTATATACAGTAAGACAGGCAAGACAG
TGTCTTCACAGAATTGTCCACATGAAACGAAACCTGAAGCAAGGAGAGAA
TGCAATAACTTCCCATGCAATGAAATCGGTGGAGTTTGGGTGGCGCTCAA
TTACGGAGAATGCAAAGGCCCGTGTGCTCGTGCTAATTACGCCACAAAAG
GGCGTAACGTGTATTGTATGTCGCCCGGTGGTCACGTGATTAGTAATATA
AAATGCAATCCTGAGAAAAAACCTCCGTTGACGAAAGAATGCTCTTCGAA
AGAATGCATCACTGAATGGGCAATTGAACCGTGGTCCGAGCTACTGAAGG
TGTTATTCCGGTCGGCGACAATTTCCGACAAATGCGACGTCTTCTCAAAA
TACGCGTCGACGGGCAGCAACAACGACTTGTGACGGTTGGTCAACTTTTC
GCTTCAAAGATCGAAGTTCAAAGTAGCGGTTTGTACACGTGTCGAAGCAA
AAACAAAGCTGGATCAGCATCGAAAAGCATGCATCTTTATGTGCACCCAA
AACAAGAGCGCAGATGAAGCCGTTCGATTGGTTTGTGCTGGTATCGGCTA
CCCGACGCCGTCTGTCAGTTTTTATCGGGCGCCACAGAGCCTGACTGACT
ACGAAGACTTCGTAGAACAACTTGCTCCTTTCAATCGAGAAGTGCTGAGG
AAAGAATTTGAACTCATACAAAAGAATGTTCAATGCGTGGACAAGTATCA
ATACTGTAAATTGGTTTCTGGGATGGGTTTTTGCGAAGTAGAGATGTACA
AATCACATTGTTGTCAAAGTTGCGTTCGTGATAGAGGGAGATGGGGTAAA
CATTAATGTTCGAGGACATGCGGACGCAATGGGAAACAATATCGTTCACC
ACGATGTATATACAGTAAGACAGGCAAGACAGTGTCTTCACAGAATTGTC
CACATGAAACGAAACCTGAAGCAAGGAGAGAATGCAATAACTTCCCATGC
AATGAAATCGGTGGAGTTTGGGTGGCGCTCAATTACGGAGAATGCAAAGG
CCCGTGTGCTCGTGCTAATTACGCCACAAAAGGGCGTAACGTGTATTGTA
TGTCGCCCGGTGGTCACGTGATTAGTAATATAAAATGCAATCCTGAGAAA
AAACCTCCGTTGACGAAAGAATGCTCTTCGAAAGAATGCATCACTGAATG
GGCAATTGAACCGTGGTCCGAGCTACTGAAGGTGTTATTCCGGTCGGCGA
CAATTTCCGACAAATGCGACGTCTTCTCAAAATACGCGTCGACGGGCAGC
AACAACGACTTGTGACGGTTGGTCAACTTTTCGCTTCAAAGATCGAAGTT
CAAAGTAGCGGTTTGTACACGTGTCGAAGCAAAAACAAAGCTGGATCAGC
ATCGAAAAGCATGCATCTTTATGTGCACCCAAAACAAGAGCGCAGATGAA
GCCGTTCGATTGGTTTGTGCTGGTATCGGCTACCCGACGCCGTCTGTCAG
TTTTTATCGGGCGCCACAGAGCCTGACTGACTACGAAGACTTCGTAGAAC
AACTTGCTCCTTTCAATCGAGAAGTGCTGAGGAAAGAATTTGAACTCATA
CAAAAGAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011230XLOC_011230Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019992-proteinTCONS_00019992-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019992-exon-sc0000345-1575043694:105219..105381TCONS_00019992-exon-sc0000345-1575043694:105219..105381Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1575043694:104360..104584TCONS_00019992-exon-sc0000345-1575043694:104360..104584Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1575043694:103838..104052TCONS_00019992-exon-sc0000345-1575043694:103838..104052Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1575043694:103407..103557TCONS_00019992-exon-sc0000345-1575043694:103407..103557Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1575043694:102214..102832TCONS_00019992-exon-sc0000345-1575043694:102214..102832Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1510915933:105219..105381TCONS_00019992-exon-sc0000345-1510915933:105219..105381Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1510915933:104360..104584TCONS_00019992-exon-sc0000345-1510915933:104360..104584Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1510915933:103838..104052TCONS_00019992-exon-sc0000345-1510915933:103838..104052Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1510915933:103407..103557TCONS_00019992-exon-sc0000345-1510915933:103407..103557Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1510915933:102214..102832TCONS_00019992-exon-sc0000345-1510915933:102214..102832Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1491911889:105219..105381TCONS_00019992-exon-sc0000345-1491911889:105219..105381Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1491911889:104360..104584TCONS_00019992-exon-sc0000345-1491911889:104360..104584Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1491911889:103838..104052TCONS_00019992-exon-sc0000345-1491911889:103838..104052Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1491911889:103407..103557TCONS_00019992-exon-sc0000345-1491911889:103407..103557Clytia hemisphaericaexon
TCONS_00019992-exon-sc0000345-1491911889:102214..102832TCONS_00019992-exon-sc0000345-1491911889:102214..102832Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345supercontigsc0000345:102214..105381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.518146	0.624162	0.276081	0.270102	6.08322	5.39168	2.82138	3.41173	1.30989	1.84521	1.0499	1.15704	12.5881	12.7992	4.93252	6.74205	5.28542	5.44083	14.1264	9.55982	8.81759	7.34082	3.18436	2.89123	4.54865	4.55606	0.504765	0.669039	2.45788	1.94654
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000884TSP1_rpt
IPR010909PLAC
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008233 peptidase activity
Blast
[Close]
BLAST of TCONS_00019992 vs. Swiss-Prot (Human)
Match: ATL1 (ADAMTS-like protein 1 OS=Homo sapiens GN=ADAMTSL1 PE=1 SV=4)

HSP 1 Score: 106.686 bits (265), Expect = 2.336e-24
Identity = 61/206 (29.61%), Postives = 100/206 (48.54%), Query Frame = 1 
Query:  235 GQQQRLVTVGQLFASKIEVQ-SSGLYTCRSKNKAGSASKSMHLYVHPKQERRFGGVWVALNYGECKGPCARANYATKGRNVYCMSPGGHVISNIKCNPEKKPPLTKECSSKECITEWAIEPWSECSRTCGRNGKQYRSPRCIYSKTGKTVSSQNCPHETKPEARRECNNFPCNEIQCVDKYQYCKLVSGMGFCEVEMYKSHCCQSC 849
            G Q R VT  +L AS I    S+ + T  +K    + + +  L V           W   ++G+C GPC   + A + R V+C +  G  + + +C+   +P  T+ C S+ C   W +  W+ C+ TCG  G Q R   C++++T K V    C    +P   + CN  PC  ++C D  +YC+ V  +  C++  +KS CC +C
Sbjct: 1564 GVQTRRVTCQKLKASGISTPVSNDMCTQVAKRPVDTQACNQQLCVE----------WAFSSWGQCNGPCIGPHLAVQHRQVFCQTRDGITLPSEQCSALPRPVSTQNCWSEACSVHWRVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITPCENMECRDTTRYCEKVKQLKLCQLSQFKSRCCGTC 1759
The following BLAST results are available for this feature:
BLAST of TCONS_00019992 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATL12.336e-2429.61ADAMTS-like protein 1 OS=Homo sapiens GN=ADAMTSL1 ... [more]
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