TCONS_00019992-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019992-protein
Unique NameTCONS_00019992-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length293

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019992-protein ID=TCONS_00019992-protein|Name=TCONS_00019992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
EAVRLVCAGIGYPTPSVSFYRAPQSLTDYEDFVEQLAPFNREVLRKEFEL
IQKNATEGVIPVGDNFRQMRRLLKIRVDGQQQRLVTVGQLFASKIEVQSS
GLYTCRSKNKAGSASKSMHLYVHPKQERRFGGVWVALNYGECKGPCARAN
YATKGRNVYCMSPGGHVISNIKCNPEKKPPLTKECSSKECITEWAIEPWS
ECSRTCGRNGKQYRSPRCIYSKTGKTVSSQNCPHETKPEARRECNNFPCN
EIQCVDKYQYCKLVSGMGFCEVEMYKSHCCQSCVRDRGRWGKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011230XLOC_011230Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019992TCONS_00019992Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000884TSP1_rpt
IPR010909PLAC
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008233 peptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..130
e-value: 1.3E-11
score: 43.9
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 131..190
e-value: 1.7E-4
score: 21.4
coord: 191..249
e-value: 9.1E-12
score: 44.7
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 190..250
score: 10.331
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 187..249
IPR010909PLACPFAMPF08686PLACcoord: 254..283
e-value: 9.8E-7
score: 29.3
IPR010909PLACPROSITEPS50900PLACcoord: 250..287
score: 9.753
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 2..40
coord: 84..125

Blast
[Close]
BLAST of TCONS_00019992-protein vs. Swiss-Prot (Human)
Match: ATL1 (ADAMTS-like protein 1 OS=Homo sapiens GN=ADAMTSL1 PE=1 SV=4)

HSP 1 Score: 106.686 bits (265), Expect = 1.230e-25
Identity = 61/206 (29.61%), Postives = 100/206 (48.54%), Query Frame = 0 
Query:   79 GQQQRLVTVGQLFASKIEVQ-SSGLYTCRSKNKAGSASKSMHLYVHPKQERRFGGVWVALNYGECKGPCARANYATKGRNVYCMSPGGHVISNIKCNPEKKPPLTKECSSKECITEWAIEPWSECSRTCGRNGKQYRSPRCIYSKTGKTVSSQNCPHETKPEARRECNNFPCNEIQCVDKYQYCKLVSGMGFCEVEMYKSHCCQSC 283
            G Q R VT  +L AS I    S+ + T  +K    + + +  L V           W   ++G+C GPC   + A + R V+C +  G  + + +C+   +P  T+ C S+ C   W +  W+ C+ TCG  G Q R   C++++T K V    C    +P   + CN  PC  ++C D  +YC+ V  +  C++  +KS CC +C
Sbjct: 1564 GVQTRRVTCQKLKASGISTPVSNDMCTQVAKRPVDTQACNQQLCVE----------WAFSSWGQCNGPCIGPHLAVQHRQVFCQTRDGITLPSEQCSALPRPVSTQNCWSEACSVHWRVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITPCENMECRDTTRYCEKVKQLKLCQLSQFKSRCCGTC 1759
The following BLAST results are available for this feature:
BLAST of TCONS_00019992-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATL11.230e-2529.61ADAMTS-like protein 1 OS=Homo sapiens GN=ADAMTSL1 ... [more]
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