TCONS_00019788 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019788
Unique NameTCONS_00019788
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2516

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019788 ID=TCONS_00019788|Name=TCONS_00019788|organism=Clytia hemisphaerica|type=transcript|length=2516bp
gttaGAACCTACAGGCAACCCCCAGTAGGGTTGGCTATGGATGTGGTTTG
GTTGTGGTTGTGTACCAGACTGGCTAGGAATTGGGATATTATCAGTGAGG
ATCACCagttgaaaaacatagaaaacaacTTCctaaaaagtcagaaaaac
tacgaactaGAGACTGAAAAGTACGAAACAAGTCCAGATGTGTATTTCGC
GActgtgaagaagccacgaccaaACCAAAACCAGAAAACCTGCAAAGTCC
TGCAAAACTGCATAACTCCATTCACAAACTGCAAATCTATTTTAATTGTT
GGTGTAGATCACAATCACAAAAAGTGGATCATCACTCAAAAGTAGCAAAA
TGTAGCCATGCTAAAGCATGAAATGCATCACACCATAGTCTTGATCAAAT
CATCAAATCACAGCAAAGAAAATTTGGAATCATAATCCTGTAAAAAAGAA
ACCCTAATATCACGGCTGCTCAGCTGTTCATTCataattcttgaaatttt
gaatcaaGACTTCTGTCATTTCAAAGATCCAGTAGCCATTAAGGAAAAAA
TACGAGCTTTTGTGACAGCTGGTGCACAAGGTGTCCAGATTGTCGCAGAT
TTTGATCGTACCCTGACAAAGGCTTTTGTTGATGGCCAGCCTGCTCATGC
TAGCTATGGTGTCATTGACGATTCATCATATATCCCTGAAACTGCCGTCC
AGGAGctAAATGCATTAAAAGCAAAATACTTTCCAATCGAAATGTCAACG
GCATTAACTGAGGCTGAAAAACTACCACACATGATTCAATGGTACAACTC
TTCTTTTCAAGTAGCAATCAAAGCTGGAATCAAAAGGCACATGCTCCCTG
CTATGGTTAGAGAAAGTAGTGTTCAACTTAGGGATGGATCTGACCAGTTT
TTCCACTTGGTCACTGAAAATAAGACTCCAATATTTATTCTATCAGCTGG
TGTAGGAGATGTGATTGAAGAAATTATGAAACAGCAAGCAGAAATACCTC
CACAATTGAAACTTGTGGCTAACTATTACTCCTATGACAGCAATGGGACA
ATGAACGGTAGGGATGGTGAACTAATTCACACTTTCAACAAACATGAAAC
CTCTCATAAAAGCAAAGATTATTTCCACTCTATCAAGCAATGTAAGAATG
TTTTGGTGATGGGAGATACTTTAGGTGATCCAGTGATGGCCGATGGCATT
GATCACATGACAGCTTGCATCAAAATCGGCTTCCTAAACAAGGACgTTGA
GGAGTCATTGAGCGCTTATTTATCAGTCTACGATATTGTTCTTGCACATG
ATGCAGACATGGACCTTATAAATCTGATGTTACGTGAAATAGTCAAAGAT
TAAGAATAAGTTTTCCAAATTCCAAGTTCCAATATTGTAGTTAGCACGAG
AAGAaggttttttccaattttagcattttccaatttttaagaGAATTTTG
TCAATTATTTTGTACAGCCTCTAATTATTGGCTTAATTACACCAAGCTGG
TATGTAGTAAACAACAGTtactttaaaattatttttacacaCAAGCCACT
TTGTTTCAAGGCTTCATAGCATCGCATAAAAACTAATGGGAAATTCAACT
ATTTTAAAAAAGGGTGTCTTTTAACTGAAATAAAGTCATGTCGTTGAaag
gttttgtttaaaaagttgTCTCTCCTTAACCTTTGCTGGTTATATTAAGT
TGCATATATATTATACCATTATTTAATGAACATATAGTTACTTTATTTGG
TATGTTATTTTTTACAATTTGCAGTTTTATATTTCTACGAAACTGTTCAA
TTGATTTTTCGCAAACTTTTAAATGACTCGCTGTAGACTATTATATGCCA
ATTTTCCAAAAGATTCGCCTATAGTAATATAGTCAAATCTTTcttattcg
aacctctataactctctattatttttgtaattcaaaCTTACCCCCAAGTG
AAAGGTAGTGTAAAATGCCCTCTACGATTCGAATAATAGGGCCTaataaa
gatcgaattagagagagatgGCAACCGTAGTCAAAAAGACAAAACTCTTC
AGAAATGGTTAGAATTTGAGTATTATcacattgaaaaatatatatcttat
cggaattttcgatttttctaaaacagcgatgcattgtgggattgtttcgg
gggtattacaatagaatttccttgaggaattcctaagagatttcgaTTGT
AATGCCCCCGAAACAattccacaatgcatcgcttttttagaaaNCGGAGA
AAAGGTAGAGAAAAACACTGAATCAAGATGGCGACCAAGAAATGGGTTTT
TCCAACTTACTGCTAAAGTTCTTGgattttttgactggtttaggccattt
ttcttcatggaaacattgtttttataatggcaaaacatccagtaagtata
tcttatattttgagttctgtttttagcataaaaaatccatttatttgtca
ttttgaccacttttctcGACAAACCATCGGAGTCGACCCAAACTTAcagt
actttttactttttat
Run BLAST on NCBI

transcript from alignment at sc0000336:291223..307442+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019788 ID=TCONS_00019788|Name=TCONS_00019788|organism=Clytia hemisphaerica|type=transcript|length=16220bp|location=Sequence derived from alignment at sc0000336:291223..307442+ (Clytia hemisphaerica)
gttaGAACCTACAGGCAACCCCCAGTAGGGTTGGCTATGGATGTGGTTTG
GTTGTGGTTGTGTACCAGACTGGCTAGGAATTGGGATATTATCAGTGAGG
ATCACCagttgaaaaacatagaaaacaacTTCctaaaaagtcagaaaaac
tacgaactaGAGACTGAAAAGTACGAAACAAGTCCAGATGTGTATTTCGC
GActgtgaagaagccacgaccaaACCAAAACCAGAAAACCTGCAAAGTCC
TGCAAAACTGCATAACTCCATTCACAAACTGCAAATCTATTTTAATTGTT
GGTGTAGGTATATATCTTTGTTGAAtgtcttttttctattttttcattct
tctttattttgttttgtatcTTATGTATTTATGGTCGTCAAAAAGTGGGG
GGCATCCGAGGGTCTTAAATCTGAAATCCTGAAACCCCgttaaatttttg
gaaagatCCTGAAATCCCGTTGATATTTGAATACCAGCATCTTtgtccat
tttctgaaaaaaattggcCATTTTAGAGTCCGAAAAGCCCTACAATATGC
AGatatgttcttagcttgttcttaatattttggccatcgaaaaaCTTTTG
GGAATCGTTCTGCAATAAAGtttccaaaaagtttgtttgtaTTATTTTCT
TGTCGGCTCGTCGAAGCCTGATTGGAAGCTGCTCTAAAAGTGAAAAGACC
AGGTGTACCCAATCGATGAAATCGATACGGGAAATcaatcgatattaatc
gattttaatcgaaAATAATCGATATAGTGATCGATTTAactaatcgataa
acaatcgatagCCAATCGATACTAAGACGTCATGTTCTTCTCGATTGGAT
TTGATTGTTATCGACTGCTATCAATTAATCGCTGATTGCTTTTGATTGTT
ATCGATTTCTTTATATTCGCAACCCTAccgtggtttttctaatttaacgc
gtggcaataaataattattttgcaaactgcaaaaaactcatttttatcCC
GCTTTTCCGGGACTTCAGCTAAAGTGCTGGcctgcagcatagggtacaaa
gtccaaatatgtgtttcccgtaatttttgtacgaagagttaggtctacac
tgagaGGAGGATGACAAAGATCCctttaatttgtgttttttaaagaaaga
agtttatcaaaaataaaactttcctGTCTAATTTTTCTTGTCCAAGGCTT
GATCACGCGTAATAATTAGAGTGAAattaattatgcagaattttggctAC
GCGTTAATGATTAGAGTAAGATTAATTACGATTTTTCGGCAAAAACAGGG
TACGCGTTAAATTAGACTAtgcgttaaattagaaaaaccacggTACATGG
TATTTGGCCATTCCTATTCCCCTGTGCATTAATCCGATTAATACAGTGAT
TTGTTTGTGTGATTCTACCCAAGCTCTGGTTGCCAAGAGGGTTAGAATTG
CGGGAAAtttggccatcgaaaaattggtCGTCAGAATAGTCATCCGGGCG
TCGAAATACTTTATTGCatgaaaatttcgcggtttcACGGTCGAGTTCTG
AAAACTGCGAAATTAAAATGCCGCGAAACACGACTATTTTCAggatttta
aaaaatcacccgaaaattagtatttttagggcaaaataggccatatAATG
AACAGAAAATtctctcaaccgcgaaattaaattcccgcgaaacttcagaa
ttttgagctgtgaaccgcgaaattaaattccgcaaaaatttcttcccgca
aaaatttcttcccttaaagtacactacgatattatcgtgagatacactct
ggtacacagAGTAGCGATCATACATACAGAAAATTAGCACAATCGATCGC
AATCGATAACAATCAAATTCAATTGATGGctaatcgataataatcgaatt
TAATCGATGAAAAAATCAATACCAAtcgataataaaattttacgttCCTA
TCAATTGGCCatcgattagttatcgatcGATCATCGATTACGAACGACTT
TTATCGATTGACATCGATTAAATCGACAATCGATGTTATCGATTGGGTAC
GCCTGGAAAAGAGAGTGACCAATCCATAGCCAATAGGNTTGACATTGATT
AAATCAACAATCGATGTTATCGATTGGATACGCCTGGAAAAGAGAGTGGC
CGATCCCTAGCCAATAGAGAAAGAGGTGagacagtctaaacttaaactcc
tatatcaggattagaaactaggctggTCTTGCCTcctttatcttttcctt
tacaacaattacaatgctgacaagttgacacaacacaacACATGCGTACA
TGTTATGTACCatttgacaagtaatccctgagagaagtttttatagaaat
ctgcaacaaaaacaaaagtggtctcttctgctgattgcttcccagcgctc
cttcgcagctgcttatcaaatttccaccaatgaggttgctgcatatttca
aacggcccttctttttggcactcgtggcctttcagtgccttgcacgacgg
gcagctgtaaaatcccatccttcatatatttgtttcaatccgtgatccgt
ggcttgagtttttttctcatcttcaatttactgaagaaagcaggaatttg
atgcaagagttagattgtcaacaaagtgccgtaaaaaatcattgaataaa
agaagaacttaaaatcttaaatattttcattttgaagaataggtgaaaaa
agtgaaacatagaaaagtttcatttttcattacattaatcgaaatggggg
atttggaaaattttctatgtttagttttttgcacaaacccctgtaactat
gggcgagcaccccgttgctaagatgttggcttgaaatcgaaaatgaaacc
actcaaaatgaaagtaaaatcggcctgtactcgaaatcccgtaatcttga
tataccagtttaagtctatactgtgaGACTGGCAGTCTAGCAAAAAGTTA
ATTCTCCTTTCAGgaaaaagactataatttgtttacctttattcttgcag
cttcctaacatccaagctctcaaacatcacaagtcaaatgaaattacttt
cgatttcccgtagaaattatgcaatgaaaaatccgggggtcaataaaTGG
AGACTTTCTTTTTCGCACaagatttttttgcttataacgaattattactt
ttaataTATTtggtaaatatattttttgattacaaaaatactttacatta
tttttaaagtttgaaaaagtcgattctacttagttctttgttttcatgtc
taacccccgtctcaaaagaagtcccagaatctCGAGATTTTTACAGTCGG
GCGTTTaaaacaaaggcgtttttatttttctgcccacttacgaatttttc
ttgaaaataggcatttaaaatatcaaatttaaaaataatagtataaaact
ttattttctACCGTATAGTCCTTCttttaaaacgaaaaaacaaaatacac
tagaaaaataaagaaattacaagtgttatcaagccacccaaaataAACTT
TCATTTGTTGCGCGTCATCAAATTGTTGTATACCTCACGATCTtttgtca
accattgtccaatcccgtaagcAATTGAAGTGCTGTCAGTAATCtgagaa
gagaacaataacattataacatcacacaaataaattacgctgggaAAGTC
CGCGAGGAAGTAGAGAGAAAAGAAGTGTaaaaaagatttacaaaatagaa
aagtttcgttttggggtaaagaatcagtattgtgaatttaagcgagtttc
tattttgcaatttttctacagagccaaataaagattttatctattgttct
tgctcgattgcctctaagGATAAGTTCCGTAGGAATGAGGCTATCGAGAC
ATaatgtgacgaatttgcgcgaaaacaaaatttaacatttcTCTAGGCTG
ACTGGTAAAAGGCTGCTAAAAAGCCGGTATTTTACTGCTTTTTGGCCAAT
CGGTCTGGACAGGTCTTTCCAGGTACTTAAAATTGCTTGGGGAGGGGAGA
AGACATAACTTGgacccccaatatggaccccaatatggaccccattatgg
accccattatggaccccaatatggaccccccAAAATTTGCAAATTACATC
ACGACGCCACGCTGTCGAATTGTATCATGGTTACCACATGTTTAATTTCA
TAGACCGGctatttatttgtatttcttgaaataaaatcatttcattatca
aaaataactttgaaattatgttttAGAACATAAGGTCACACGTGTCTTAG
ACACAGGGCAcagcaacctcgtccccgtgtatcccaggctttatttacgt
tactgattgacgccagagaataccctggtgttggctgatgcaatttcccc
ctctcagagggggaacttctcaaaacaatacgtcataaaaaattctGACG
TTACAAAGCTACACTGCAATGCAACCACTCGTTTTTTCTGCCAACAGTGG
AATGAGCACAGAAACTAAGCGATTTTACGCCCGTTTGAGCGAGCTTCtat
atgagaaaaataaatcttcattttcggaaacatatttttatgtaaaaaga
aaaatttcttttagtcTGATTCGGTCAGCTGTGGTGTGTTTGAGAGGCTC
GAGGTCCTGGAGGCACCGGAGACACTCGCCTTTCGTTAACACCACTGCTG
ACGCAGTTACAAATTTCATTTGTAATATTTAATTAAAGTTTTCAATAAGT
TATAAGTTTTGNATCACTGCTGACGCAGAAGTCACAAATTTCATTTGTAA
TATTTAACTAAAgttttcaataagttttcagttttgttgttttttttatt
actatATTTTATTAGACACGTATTTTTCAATACgtatttttggacatttt
ttgagtttttcacacTGGTCTTTGCAGGGTTCCAGTTTCATGTTTGcctt
ttctttttcctcttgGTCATTGCTCactgtttttcagatttttcatctta
aaatatatttgatttctattatatgcagggttcgaattataaattttagg
agCTTCGCTATTTTTTGGAGCAAAGCGAGGTAAAAAAGCAGTGCCGCagg
caaattttttttactgtttgcgaagcattttcattattttgcaaTGTTGT
TTAGAAGAAAATGCGGATCTTCAATGCATTTCTCGAGAAAAGCAAAGTAA
GACTTGAAGTAAGAAATTATAGACAAAGCAAAGAATAGTGAAGTTTTAAA
GTGGCGAGTAAAGCAATAGAAACACGAGTGAGTAAAGTTGctagtttata
aagcaataaataagcgaatgaataaagtagcgaagtggcgagtagataaa
gcaatagataaacgaatgaataaaatagcaaagtggcgagtagataaagc
aatagataaacgagtgaataaagttgcgaggtagcaagttgataaagcaa
tagataaacgagtaaATAAAGTAGCAAGGAatgagttgataaagcaatag
ataaacgattGAATAAAGTTGCGATGTAGCAAGTTgacaaagcaatagat
aaacgattGAATAAAGTTGCaaagtagcgagttgataaagcaatagataa
acgaatgaataaagttgcaaagtagcgagttgataaagcaatagataaac
gagtaaATAAAGTAGCAAGGAatgagttgataaagcaatagataaatgat
tgaataaagtagcgaaatGGCAAGTTCACAAagcaataaaatataaataa
atgaaagaagtagcaaaataggtgttttcttataatttttaacttcgcat
ttttgagttacaaaatctttttgggtcgctaaatctaaaattcacttcgc
attttgcgaagtgcgaagctataattcgaaccctgataTGTATatccaaa
tgaaaaaaaaaatgcaatagTTTCAAACCCAGGAACAAATGACATCTGAC
GTTTTggttttgaattacgtaatcttacgcgttcgaaaactagccaatgc
cagggtattatctagcgctatcagtaagtaTCAAAgagctgataatgcgc
agggaacaAGGTTGTGGGCACAgatcatacaaattacagaccagaaaaat
tGTAACGCGCTCGTATCATATAATTTATATAtaacatgaaaataataaat
GCAATGGAAATGATGTATATGCTATTTAGAAGATTTCAATGACAAATCGT
CAATCCCAAATATTGANAATAATATATGCAATGGAAATGATGTATATGCT
ATTTAGAAGATTTCAATGACAAATCGTCaatcccaaatattgacaaaaat
gacaCTTAAGTTATGTAAATaagaacattatcaaaaaaaatgaggtatgt
atacaccaatttacaacaagtgttttttcatgctcaataggatgctggcg
gtgcaaatggatatagattgcgattcaatgaaaacattaatgctccaaga
gagctgtttaagagatatgaaaatagtacttttattattatttttgtttt
cgtaTGAACAGAGCATTACATAACTGCAAGTTTTGAAAGGACGTGTTTCT
TCCACGAGAAAGACGTTACCTGTCATTTTCCTGACAAAATGACACTTTTC
gacaaaaaatattgacagggcactTAATTGGGATACCTGCAAGCTTTATT
Tacatcaaatattttaattgtaccgaatgagatgcctttgatataaatag
ataaatattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAGGCAAACACTGGGAAGcgcagttttagagat
acaattctcatcaattattctattgtccttatgttgacaaaatgacttat
ttttacaaaataatgatctgatggtcaaatataaagcttctttaatcaac
caaaatgctttcccgccatttttgagggggtccataatgtggtccatatt
ggggtccataatggggtccatattggggtccatatagGGGGGTCCAAGTT
ATGTCTTCTCCCCTTGGGGAGTCTTATTTCTTGGTTTACTAGGAGTAAAA
TCCCTCCtcagatttcttttgattcctTGAGACTCCCCAGGCAGCACCCC
TTATCGCACCAACAcattcttttttcttatcaCAACAGATCACAATCACA
AAAAGTGGATCATCACTCAAAAGTAGCAAAATGTAGCCATGCTAAAGCAT
GAAATGCATCACACCATAGTCTTGATCAAATCATCAAATCACAGCAAAGA
AAATTTGGAATCATAATCCTGTAAAAAAGAAACCCTAATATCACGGCTGC
TCAGCTGTTCATTCataattgtatattttttcttttgataatgaATTTGT
TATTTTAGGATTTAAGATAATAAGGATAGTAATTGATTAAATACTGAAGC
CTTTTGAAATGATAGCAGTCCAGAGCCAAAGGACTTTCATACTTGCCACA
GCAGTTGGAGCCACTCTAGGATTGGGATTATACTATCTTCGATCTCGAAA
AGAAAGAaatgctaaaattcaaaaacgaGTAGATAAAATTGTAAGTAAGC
TTAAGCTTAACAGATATATTTGAAATTGTGTTTACATTCAGTCAGATTTG
AAAAGCTAATTCACTTAGCAATTGAATGTGTCTTTATGTTGTGTTCAAGT
GTATTGTGCCTCTGTGTTTTAGCTCTTCTTGGGATATGAGCCATACATAA
ATGAAGCAACCAAGGATCATATGTTCTTTATCCATTATTTTTTAATCCTT
CATCTGTATGTTTCACTTTTGTTCAcagcttgaaattttgaatcaaGACT
TCTGTCATTTCAAAGATCCAGTAGCCATTAAGGAAAAAATACGAGCTTTT
GTGACAGCTGGTGCACAAGGTGTCCAGGTTAGTTTATTGATTTAACTATT
TTAATTCATAAATTAGCTACTTGATAGAAGACACAAGAAAAATTAGGTAA
TatctttacatttttcaaattcttctgGATCAAGATTTTGAAGTTCTTTA
AAATTGTCTCTTTAGATTGTCGCAGATTTTGATCGTACCCTGACAAAGGC
TTTTGTTGATGGCCAGCCTGCTCATGCTAGCTATGGTTTGGATTTTATAT
TCAACAAAACTTCTCACATGTATAATATCTATAACTGTTTCACAGGGAGG
TGCTAGTTTTGACCCTCTTAGTTTGTTTAGGCAAACTACATACCATATTT
ATTCTGTCCAGAAAAAAGGTTCTAATGTTGAAGTCTGCAACAAAAGCACT
GCACTAACCTTCTAAACCATGCCCTGTCGAATTCAAAGATTTCATTGTTT
CATTTAACTTTCAGGTGTCATTGACGATTCATCATATATCCCTGAAACTG
CCGTCCAGGAGGTAAGATTTAATTAAAGTTCAAgtattgattgaaaaatt
accCATTCGTTTTTGAAGGTAGAATATTCATTTAGAGTAGTTGAGGAAGG
ATCAATACATAACCAGAAAATTCACCCTTGCTCAACAATGCATTTTTTAG
ACAGTACATTTGATTGATAACTGTAAAATGTAAACTGTATATAAAATATC
CATGAACAGAGTTGTCGCACAACTGGGTTAGATTGTTTCAACAACCCTGT
TGTTTAAAAATTATGGTAGTCAGTATTTACAATCCGTTTAGTTGCCTTAC
TGATTTTCAGAAATTCTGTTTTTAATCCATTATCCgatcttttcatttta
aagtagTAAAACATAAGTGTCAATAGAAGAAAAACTTGAGTGAAGGATAA
GAAAGAGAATAGGGCTATCATTAAGTAATTGCCAAACAACTGGTTGTCAA
ACAACTGGAACTGGGCTGTCAAACAACTTGGATTTTCACTTGTTTGACAG
TTCAGTTGCTTGACAGTTTCATTCAAATGACAAATAATTGGGctgttgaa
aaaatgcactgtcaAGCAAGTGACATAGGACCCATATAATCTCTTATTTA
ATTCATTGAATGAGCTTTTTGggcctacctggaggtcctataaattaccc
tgtgtttgtttgtttgtctgtcCATTGGTTTGTTAACAGTTTTTCTTGGG
ATTAGCTTGAAGAATCTTTTAGACTTTTGGCTCAAATATGtaaaatgata
atacctaaaatttgacaaagaccaattttggaagaaaaaaaattcttttt
tgtttttgtgaccAGATGTGGTTTCTTTGATATCTCTCAAgtttttctca
ttagttttttctaatttttttgattttttcaatttaatttatttttcaat
ttaatgtTTTCTGTTAGGTAGGTcaataaaagtatcacttgtttttgttt
taaatatttttcttttcagctAAATGCATTAAAAGCAAAATACTTTCCAA
TCGAAATGTCAACGTAAGATATATAATTATTCTTAAACAGACCAAACTTA
GGAAAGGTGTTCTTGAGAGCACAAGAATAAGAACCTTTTCATTGAGAATA
TTAAAGTCACTTGTGTACAGGTTTTTTTAATCGATCATGAATAAGAGTTT
AAGAATTTTTACAAAACATAAGTTATACCAAGTAGGCATCACCTCCAGCT
TTAATTCTCCATAGTGCAACTATTACTGCAAAGATTTGCCGTGGTAAAAC
TTCAATTGTAAATAGAAAGAATTACTGTCCAATAGACACTGACATTTTGA
TATATATCATCATCATACCAGATCATACCAACATGTATATGGAGAACTAA
TATTCCTACCTGTAGATTTTGCTAATTGTAGTGAGATGTAATTTTAATtc
gaactttttatttttatgtaattACAGGGCATTAACTGAGGCTGAAAAAC
TACCACACATGATTCAATGGTAggtaaaaaaagataaaacaaatTGGGGA
CAATGCCAAAACATTAAATGTACTACTCCTCTTATTTTGAAGCACACAAG
TTTTTATTGGAGTTGTGCTATTTTCTCCCcttgatttttttggtcctACC
TCAGAGGTCCtttaaatttaattgaaattgtTGGTTCGTAtgttatcagc
tttttttttggatcggccaattagttttttctgattttttgcatagtgat
gcAAAATAACAATACCCATAGAAAATTTTCGTTTGCCTTGAAATacagat
tttcgttttttggggatATATTCCCATTTATGATAGGGAAATCacgctaa
aatatttatttaaccATGCTTCCGATAAGATATTATGAAATTAGACAGTC
CaacaaacttgaaattttgaccagtaaTTTTTATCGTTTTGATCAAGTCC
ACGTTTTGATCAAGtccacgtttttttttttaagaaacacacttttaaga
aacatgaggctcagaatgcctaaaaactaagaaacatgctgaggctgaga
ataggaaaataacatttttcaattcggttttttttaagaaccttccaatc
aaaacaatttattttttctttgcatgaaaaataggctgattatgtcaaaa
aaaaattagaaacatgtaagaaacatttaaggctcaaaagatCGATtcct
taagaaacattgaggctgcttagtaaaactagtttcttaaaaaaaacgtg
taacctgTTTAACCTTTTGTATGTATTATAGGGTCAATAAATCAACATAT
TTAATGATATCTCATGATTTGAAAGTGCTATGaagttgaaattttgacca
gtaaTAGACCATGATAATGCAAATGAAAACTTTATTGTTATGATCCAGCC
ACCACTTTACTGGTATTTTACAGTCCAGTATCATAAGTTTCGTTATGTGT
TATACTATTTTGTTATGCTTAATAACAAAATCAAGCTACTTTTGATAATA
TCATGATTCAGAAGTGCTATGAACTTGTTTTACTGTTTTACTGTTTTACT
TGTTTTTAAGTCTCATTTCTTACTGATGTTGgcattttttcctattttct
ttttacatcaatcttcaggacCTCCATTCAGCATATAGCTTGTTAGTTTG
ACATTCTGATTATTTCTTTAAGGTACAACTCTTCTTTTCAAGTAGCAATC
AAAGCTGGAATCAAAAGGCACATGCTCCCTGCTATGGTTAGAGAAAGTAG
TGTTCAACTTAGGTAACAAAACTTAAAGATTGATGCTTGCAATGAATATC
TTTTGGAAGTCATTTTGTGCCttatatgtgactccccaagcgatttaaag
tacctgaaaatgggACCGGTCTTTAGACGGTCTTTTAAGGGCCGGTAAAT
GACCggtaaaaatttaccaaaaggcCGCTAAGAGTTTAGGGGACCGGCCC
CGATCGCTCGGTTGACATCCTTTTACAACAATTTCTTGATGTAATTGTTA
CTAAAAATCACTAACTAGCGGCCTAGACAGGTCTAACGAACGGCCCAGAC
CGGTCCAACGAGCGGTCAGGACCGGTCTAGTGAGCGGCCACGACCGTTAG
AGATCACATTTCTAGAAGGTCTGGAGGCcgatctaaaacaaaaatttgac
cgcTACTAGACCGCTCGTAATACCGGACTAAGACCGGtctgattttcagg
tactttaaattgCTTGGGATGTCACATATATTTAgtcattgtttttcttt
aaagattttttggaaCTTTTAATTTTGATGTTATGGGTCAAATCTACATA
ATTTAGTCCTGTTTTTACCACAGTCTTATATTTGTGTTTTAATATGTTAA
AATCTCATATTCCACTTTTTTTATTACAGGGATGGATCTGACCAGTTTTT
CCACTTGGTCACTGAAAATAAGACTCCAATATTTATTCTATCAGCTGGTG
TAGGAGGTATATCTTTctgaaattttatatataagtCAGTATATATAGTA
TGCCAGTCAGTATGCAGTGCTGCTGAGTCCTAATAAGAACGAAATGCAAA
TGCTGCTCTGCCTAAAAGAAGATGGTTGGACAGAAATTCACATATGTTTT
TCACCGGGTGTGACTTGTAATAaggaatgggcttttttggtgaCTAACAG
TTGTAAAAATTGACTCTTTCTCTAGCCTTTCTCCTGATGCTTTCGAGTTG
TGATAATttacatttttagttttcttaTCTTTTCAGATGTGATTGAAGAA
ATTATGAAACAGCAAGCAGAAATACCTCCACAATTGAAACTTGTGGCTAA
CTATTACTCCTATGACAGCAATGtatgttttttggacctaccttaaggta
gtcctttaaattaacccttgtccgttcgttcgttcgtctgttgccagctt
ttctcaggatcggctcattagttttttctatttttttgcacaacgatgca
aaatggtaatgcccaaaatgtgacggagcccgattttcgagaaaaaaaaa
attaatttccggccgaaaattccggaaatatgtttttttggcattttctc
aagattttatcattcgttttttctgattttttgctcaaagatgctaatta
acaatgcccaaaatatggccgagtccgattttaaagaaaaaaaattttcc
ggcagaaaatgccggaaatcgccgtttttctggattttcattggactttt
tccttataattggttgttttttcattcaaaaacattattaatagtaatgc
ccaccatcaagcatgttcaaatttacattaaaatagatttttgaagccgg
aactatttaaaaatcgccggaacaacctattttcgccggaaagacagtat
ttcttgaatttctcaaggtgtactttatatttttttatgaaattttgcac
actgatgtaaaatgacaattcctaaaaagtgacggagctcgattttcgaa
aaacatttttttccggccgaaaatggcggaaatatgccggaaaaactgtt
tttttggcattttctcgagattttatcattggttttttctgatttttttg
cttaaagatgcgtattaacaatgcccaaaacatggctgagtcctattttt
gagaaaaattttttccggccgaaaatgctggaaatatgccggaaatcgcc
gttttctggattttcattggacttttttcttataattggttgttttttaa
ttcaaaaacattattaataccaatgcccaccatcaagcatgttttaattt
tcaataaaattgatttttgaaaccGCAACTATTGACTGACTGATAGCTGG
ATATTACATTATACAATAAACTACCCATAACCTAAACTTCAACAATAATA
GAAATAAGTAATTGTTAAGTTACAGAGATTCAGAGAGCCAGTCGCCAAAA
TAGCTTTCATCAGACTAAAATAAAACTCGAAGAGCTCGATTCGAGCTTTG
TACAACTACTGTATTTATCTTGATTTTCATAATGAAATGCGTAAGCTCGA
TTAATGGAAGGTTTATCATCTGATAGTAATCTGGCTACTTGGAGTTTGAG
CCAcattttcagaaaaaccaaactCTTCATTCCAGGGGACAATGAACGGT
AGGGATGGTGAACTAATTCACACTTTCAACAAACATGAAACCTCTCATAA
AAGCAAAGATTATTTCCACTCTATCAAGGTATGTTCTCTcatatttattt
accatttctTGTTCATTTGTTAGCTACAATAACATTCAGCCTCGGTGTAC
AAGTGCAATTTACAGGTATATAAAAGACTTAATACCAGTCCGGGTAGGAA
AGCCAATATTATAAATTGTAAGGTCTTTCTTCAAAGGTTTTGTCTTTAAA
TAAGAgagatatcgtttgcttactcgtcaattttaacttacaagcttttt
caaagaaaaacattttttctttatatcagcataatataacaaaagggATA
CAACGTCCTGATTTGAACATgtttctgatatgaaacgggaaaacTACAGT
TTTTACAGTCCCAAAAGTTTTTTGGTAAGTGTCGTGTTGGTAAGTgcttt
ttattttctcattatagCAATGTAAGAATGTTTTGGTGATGGGAGATACT
TTAGGTGATCCAGTGATGGCCGATGGCATTGATCACATGACAGCTTGCAT
CAAAATCGGCTTCCTAAACAAGGACGTAAGTGCTTGTCTTCGAATTTGAA
ACTTTTCTGTTCCTGAAGGATAACCGCCTGGTCTCTCAGGGCGAAAAGAA
AAAGCTATGTGACctcctaccattaattttttaatcttgatttaaaggtt
ttcttaATATCGCTCGAAAAAGgactaaaatttgggatattttggCCCAA
TGGCAAAATTTAAAGGGATCTAACTCACTTTCGAATTTAAGAATTGCCAA
tatctaatttttttcaagtacATGGGAACATGTAGAGTTATGAAACGTAC
AAAAGTCTTGTGAGTTTCGTGACATGGTCATAAGTaaggcaaaaacaaaa
aagcttatTAATAAGAAAGTTGTGTAAGAATATTCGATTAAGCCTTCTTC
GATAAATCAACCGAGAATATATTATCGATTCCGGTCGGAAATAACCATTT
AAGTATAAAagattttcatgttttgttaaattACGTAATTTCTGCATTTA
TGAAAGtgaacgttcgatttgcgtaaagGCGTGTTTCTATCGATCACACT
AGgtcaaaatttcctaaaataggagagtttctaaacatcgaccagaaatg
gtgACCACCATCGGCAACCACCATCGGCCACTGCGACTTTTAGTATTCCG
AGGACTTGATTTGGACATTCTCTACGGtcgagagagcagataaactcgat
aacccaaatttatctggtcgccggtcgtgatcgccatttttggtcaacgt
ttagaaactcccctaAAATAGCATATAGCCATCAcgaattaaattttctt
gtaCACAAAATGCGAGCTTTCGTGCTCTTTTCTCTGCTGAAAACTTACAA
CCCTTTTAAGTGGACAGGAGCGCACACGTACACACGTCCATATGCGAccg
atggaaacaggccttaaGAGATCGCCTCTACacattcgaacgtttgcttc
cataatggcggaaattatgTCACTTAAACAAAACATGAGAAACCCATTTT
ATAACACCATACGACTCACAAcatttatttgcttttttttcgatttcagg
TTGAGGAGTCATTGAGCGCTTATTTATCAGTCTACGATATTGTTCTTGCA
CATGATGCAGACATGGACCTTATAAATCTGATGTTACGTGAAATAGTCAA
AGATTAAGAATAAGTTTTCCAAATTCCAAGTTCCAATATTGTAGTTAGCA
CGAGAAGAaggttttttccaattttagcattttccaatttttaagaGAAT
TTTGTCAATTATTTTGTACAGCCTCTAATTATTGGCTTAATTACACCAAG
CTGGTATGTAGTAAACAACAGTtactttaaaattatttttacacaCAAGC
CACTTTGTTTCAAGGCTTCATAGCATCGCATAAAAACTAATGGGAAATTC
AACTATTTTAAAAAAGGGTGTCTTTTAACTGAAATAAAGTCATGTCGTTG
AaaggttttgtttaaaaagttgTCTCTCCTTAACCTTTGCTGGTTATATT
AAGTTGCATATATATTATACCATTATTTAATGAACATATAGTTACTTTAT
TTGGTATGTTATTTTTTACAATTTGCAGTTTTATATTTCTACGAAACTGT
TCAATTGATTTTTCGCAAACTTTTAAATGACTCGCTGTAGACTATTATAT
GCCAATTTTCCAAAAGATTCGCCTATAGTAATATAGTCAAATCTTTctta
ttcgaacctctataactctctattatttttgtaattcaaaCTTACCCCCA
AGTGAAAGGTAGTGTAAAATGCCCTCTACGATTCGAATAATAGGGCCTaa
taaagatcgaattagagagagatgGCAACCGTAGTCAAAAAGACAAAACT
CTTCAGAAATGGTTAGAATTTGAGTATTATcacattgaaaaatatatatc
ttatcggaattttcgatttttctaaaacagcgatgcattgtgggattgtt
tcgggggtattacaatagaatttccttgaggaattcctaagagatttcga
TTGTAATGCCCCCGAAACAattccacaatgcatcgcttttttagaaaNCG
GAGAAAAGGTAGAGAAAAACACTGAATCAAGATGGCGACCAAGAAATGGG
TTTTTCCAACTTACTGCTAAAGTTCTTGgattttttgactggtttaggcc
atttttcttcatggaaacattgtttttataatggcaaaacatccagtaag
tatatcttatattttgagttctgtttttagcataaaaaatccatttattt
gtcattttgaccacttttctcGACAAACCATCGGAGTCGACCCAAACTTA
cagtactttttactttttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011127XLOC_011127Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019788-exon-sc0000336-1491911889:291223..291529TCONS_00019788-exon-sc0000336-1491911889:291223..291529Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:291223..291529TCONS_00019788-exon-sc0000336-1510915933:291223..291529Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:291223..291529TCONS_00019788-exon-sc0000336-1575043694:291223..291529Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:298311..298492TCONS_00019788-exon-sc0000336-1491911889:298311..298492Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:298311..298492TCONS_00019788-exon-sc0000336-1510915933:298311..298492Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:298311..298492TCONS_00019788-exon-sc0000336-1575043694:298311..298492Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:298951..299049TCONS_00019788-exon-sc0000336-1491911889:298951..299049Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:298951..299049TCONS_00019788-exon-sc0000336-1510915933:298951..299049Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:298951..299049TCONS_00019788-exon-sc0000336-1575043694:298951..299049Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:299188..299257TCONS_00019788-exon-sc0000336-1491911889:299188..299257Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:299188..299257TCONS_00019788-exon-sc0000336-1510915933:299188..299257Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:299188..299257TCONS_00019788-exon-sc0000336-1575043694:299188..299257Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:299487..299533TCONS_00019788-exon-sc0000336-1491911889:299487..299533Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:299487..299533TCONS_00019788-exon-sc0000336-1510915933:299487..299533Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:299487..299533TCONS_00019788-exon-sc0000336-1575043694:299487..299533Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:300492..300535TCONS_00019788-exon-sc0000336-1491911889:300492..300535Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:300492..300535TCONS_00019788-exon-sc0000336-1510915933:300492..300535Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:300492..300535TCONS_00019788-exon-sc0000336-1575043694:300492..300535Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:300950..300991TCONS_00019788-exon-sc0000336-1491911889:300950..300991Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:300950..300991TCONS_00019788-exon-sc0000336-1510915933:300950..300991Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:300950..300991TCONS_00019788-exon-sc0000336-1575043694:300950..300991Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:302145..302234TCONS_00019788-exon-sc0000336-1491911889:302145..302234Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:302145..302234TCONS_00019788-exon-sc0000336-1510915933:302145..302234Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:302145..302234TCONS_00019788-exon-sc0000336-1575043694:302145..302234Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:302852..302928TCONS_00019788-exon-sc0000336-1491911889:302852..302928Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:302852..302928TCONS_00019788-exon-sc0000336-1510915933:302852..302928Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:302852..302928TCONS_00019788-exon-sc0000336-1575043694:302852..302928Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:303209..303294TCONS_00019788-exon-sc0000336-1491911889:303209..303294Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:303209..303294TCONS_00019788-exon-sc0000336-1510915933:303209..303294Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:303209..303294TCONS_00019788-exon-sc0000336-1575043694:303209..303294Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:304558..304650TCONS_00019788-exon-sc0000336-1491911889:304558..304650Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:304558..304650TCONS_00019788-exon-sc0000336-1510915933:304558..304650Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:304558..304650TCONS_00019788-exon-sc0000336-1575043694:304558..304650Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:305040..305147TCONS_00019788-exon-sc0000336-1491911889:305040..305147Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:305040..305147TCONS_00019788-exon-sc0000336-1510915933:305040..305147Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:305040..305147TCONS_00019788-exon-sc0000336-1575043694:305040..305147Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1491911889:306172..307442TCONS_00019788-exon-sc0000336-1491911889:306172..307442Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1510915933:306172..307442TCONS_00019788-exon-sc0000336-1510915933:306172..307442Clytia hemisphaericaexon
TCONS_00019788-exon-sc0000336-1575043694:306172..307442TCONS_00019788-exon-sc0000336-1575043694:306172..307442Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000336supercontigsc0000336:291223..307442 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22228	0	0.417243	0.767497	0.900617	0.298937	0	0.579187	0.135832	0.357342	0	0.0577485	0.117594	0	0	0	0	0.1684	0	0	0	0	0	0.0987618	0	0.0929255	0	0	0	0
Blast
[Close]
BLAST of TCONS_00019788 vs. Swiss-Prot (Human)
Match: 5NT3B (7-methylguanosine phosphate-specific 5'-nucleotidase OS=Homo sapiens GN=NT5C3B PE=1 SV=4)

HSP 1 Score: 223.402 bits (568), Expect = 1.158e-65
Identity = 101/274 (36.86%), Postives = 171/274 (62.41%), Query Frame = 1 
Query:  523 KDPVAIKEKIRAFVTAGAQGVQIVADFDRTLTKAFVDGQPAHASYGVIDDSSYIPETAVQELNALKAKYFPIEMSTALTEAEKLPHMIQWYNSSFQVAIKAGIKRHMLPAMVRESSVQLRDGSDQFFHLVTENKTPIFILSAGVGDVIEEIMKQQAEIPPQLKLVANYYSYDSNGTMNGRDGELIHTFNKHETSHKSKDYFHSIKQCKNVLVMGDTLGDPVMADGIDHMTACIKIGFLNKDVEESLSAYLSVYDIVLAHDADMDLINLMLREIV 1344
            + P  ++E + A    G   +Q+++DFD TL++   +G+   +SY ++D+S  I E   +EL AL   Y+PIE+    T  EKLPHM++W+  +  +  +  I++  +  +VRES+  LR+G   FF+ +  N  P+FI SAG+GD++EEI++Q     P + +V+NY  ++ +G + G  G+LIHT+NK+ ++ ++  YF  ++   NV+++GD++GD  MADG+  +   +KIGFLN  VEE    Y+  YDIVL  D  +D++N +L+ I+
Sbjct:   16 RQPGRVQEIVGALRKGGGDRLQVISDFDMTLSRFAYNGKRCPSSYNILDNSKIISEECRKELTALLHHYYPIEIDPHRTVKEKLPHMVEWWTKAHNLLCQQKIQKFQIAQVVRESNAMLREGYKTFFNTLYHNNIPLFIFSAGIGDILEEIIRQMKVFHPNIHIVSNYMDFNEDGFLQGFKGQLIHTYNKNSSACENSGYFQQLEGKTNVILLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKDETLDVVNGLLQHIL 289
The following BLAST results are available for this feature:
BLAST of TCONS_00019788 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
5NT3B1.158e-6536.867-methylguanosine phosphate-specific 5'-nucleotida... [more]
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