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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019687 ID=TCONS_00019687|Name=TCONS_00019687|organism=Clytia hemisphaerica|type=transcript|length=725bp
AATGTAAACCAGAacgtaaaatatcaaaaactagactgtgaaatagttta
cagcatggatatccaggctagtataaccatcattctttcaaaataaataa
aaattgtctaattctgaATAATCAAAAATCCTCATTTAATAATGACTTAC
GTTTTGGGGACCATATAATGTACATATCTTCCCATTTCGTCGTAACATCT
TTAGATTCGGAAGATTTATTGGGTACCATCAAGACCTCACCTTTCGCCGT
CAACAAAGCTGCCTGGGAAAATCGTTTGAATGGCCAAGAATACCACGCTT
TGGGCAGAAACTGTCAAGACTGGGTGATTCAACTTTTAAATGATATCGAC
CCGTCAGGAAAATTGAGACTTTCACTAGAAGAGAAAGATATCcaaacaat
aaaagaaaccTCTGTTAAATATCTCAGAGACGCTTTGATCCTCGCTTCAG
TTTCACTCGCTGTACAGCAAAAATGATGATAACGAAAGAAGACCGGGCAG
TGTGTGGTCTAAGTTTATATGTTatgattttatattttgatttgtaAAGA
GTTATGTTATACCAAAtactttttttgtaaatatgagAAAATTTTGATCA
TTGAATAAGTTCCAATCTAAATTAATTTAATACTCATCCCcaatctggat
gaaaaagataaaAGCGGTGCGCTAACCTAGGCAGATTCTATTACGGAGCC
ACGGCTTTTAGAGATAATACTTGCC Run BLAST on NCBI transcript from alignment at sc0000333:232745..235777- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019687 ID=TCONS_00019687|Name=TCONS_00019687|organism=Clytia hemisphaerica|type=transcript|length=3033bp|location=Sequence derived from alignment at sc0000333:232745..235777- (Clytia hemisphaerica)
AATGTAAACCAGAACGTAAAATATCAAAAACTAGACTGTGAAATAGTTTA
CAGCATGGATATCCAGGCTAGTATAACCATCATTCTTTCAAAATAAATAA
AAATTGTCTAATTCTGAATAATCAAAAATCCTCATTTAATAATGACTTAC
GTTTTGGGGACCATATAATGTACATATCTTCCCATTTCGTCGTAACATCT
TTAGATTCGGAAGATTTATTGGGTACCATCAAGACCTCACCTTTCGCCGT
CAACAAAGCTGCCTGGGAAAATCGTTTGAATGGCCAAGAATACCACGCTT
TGGGCAGAAACTGTCAAGACTGGGTGATTCAACTTTTAAATGATATCGAC
CCGTCAGGAAAATTGAGACTTTCACTAGAAGAGAAAGATATCCAAACAAT
AAAAGAAACCTCTGTTAAATATCTCAGAGACGGTAAGTACCTATAAAGCT
TCAAAAGTAAAAATTACAAGCATGAAATTTCATTATACTAATTTTATTAC
CTTTTAGGTGAATTGATTGAAAAAAAAACAGGTTTTAGCCTTCGGTTTCC
GAGTGTACTGTACCACAGATTTTCGCTTATTTCCCGCAGTTTTCTGCGGG
TTCCCTCGATTCCCGTTAGATTTATTTTAAGGAAGTTAGATTTATGTTTC
TCTTGTCAGAGATCTCCCGCCGCCTGCGGCTTTATTAGGTTTTCCTGCGG
GTTTATTAAATTTCCTGCGGGTTTCCTCGATTTCCCTTGGATTTACGTTT
CTCTTGTCAGAGATCTCCCGCCGCCGCCTGCGGGTTTATTAGGTTTTCCT
GCGGGTTCCCTCGATTCCCCTTGGATTTACGTTTCTCTTGTCAGAGATCT
CCCGCCGCCGCCTGCGGGTTTATTAGGTTTTCCTGCGGGTTCCCTCGATT
CCCCTTGGATTTACGTTTATCTTGTCAGAGATCTCCCGCCGCCGCCTGCG
GGTTTATTAGGTTTTCCTGCGGGTTCCCTCGATTCATCTCGGATTTATGT
TTCTCTTGTCAGAAATCTCCCGCCGCCTGCGGGTTTATTAGGTTTTCCTG
CGGGTTCCCTCGATTCCCCTCGAATTGATGTGTTTTAAGTATATGAAAAA
TGAGCTACTGCAAGAGGTTGTTATTTTTTAAATTTATTGATGACACTCAT
AACAAAATTTGTTTGGAAAAATCCAAGCAGAAATCAATTATTTTTTGATT
TGATTTGATTATAATTCTTGTGTATTTGAGGACATTTTTGTATTAAGCAA
TTATTGGCCCCGTTCAAAAACGAAAATTTTGTAAAATGCAAGGGTGATTA
TTTAAATCGTCGCAAAATTTCGCTGTTGATACAGCTTGTTTTTCTTTATT
CTATTATAAGCGGTGTATTTCAAGAAGATAGGTAGTTTCTTTAATTATTT
GCTAACACAAAAAGTGCATGATATCTGTAATAACCAAAGAGCTTCCATTT
AAATATAGTTATTTCGACGGGTAGTATAAATAACATTAATCATAATGAAT
TTTGTAATAAAAAGAGGTATTTCAGGTTATAAAGTTCATTATAATTATAT
ATAGAAGTTATATAAATATGAAGGTAGTTTACTGAAAGCCGGTTATTGTT
AATACGTGATTGTAGATATAATCATGGAATGTTATTTTATTTACATTTTA
AGGAATTTTATGAAAAATTAAAAGACTGTTACTTTAATTCTATTTATATT
TTCGGATTTTGAATAATATAGACTCTTAGTCACAATACAAACGCAATAAG
ATTTGAGTGTCCAATTAGTTTACTGATTCATAAATTTCTGAGGTTTTGAT
AGACTCGGAATCCAGTCGTTTATAACGTTTTTGTTGAAAGCGGGAAATTT
TTATGTCGGGATATGGTTAAAATAAATATAAACTATATTGATGCTCCTGT
CAAGTTTTCTACTTCCTATTTTTTACTGAGTTAAGTCGTCTAGCATGCTA
GACTAAGGTTTTGATAACTAAAGATTTATAAATTACCCGCAGTGAAATTT
GGAAACCCGCAGGCGGCGGCAGGATTCGAGGTTTTGATAACTAAAGATTT
ATAAATTACCCCAGTGAAATTTGGAAACCCGCAGGCGGCGGCAGGATTCG
AGGTTTCGATAACTAAAGATTTATAAATTACTCGCAGGGAACCCGCAGTG
AAATTTGCAGTGAAATTTGGAAACCCGCAGGCGGCGGCGGGATTCGAGAT
TTCGATAATTAAAGATTTATAAATTACCCGCAGGGAACCCGCAGTAAACC
CGCAGTGAAATTTGGAAACCCGCAGGCGGCGGTGGGATTCGAGGTTTCGA
TAACTAAAGATTTATAAATTACCCACAGGGAACCCGCAGTGAAATTTGGA
AACCCGCAGACGGCGGCGGGATTCGAAGTTCTGATAACTAAAGATTTATA
AATTACCCGCAGGGAACCCGCAGTGAAATTTGGAAACCCGCAGGCGGCGG
CGGGATTCGAGGTTCCGATAACTAAATATTCGAAAAGTTGCTATAGCATA
TTTTAAGTCAGTCCGCAGGGTTCTGCGGGAATTATTGGAATATCTGTGCC
TAAGTGGGTTTCCTAAAAAATTAGTGTAAATATGAAAATAAATACCTCGA
CGGATCGCAAAAGTTTTTTATCGTTAAATGTTTTGAAAGCTCGATTCCTG
TAAGTTGATTCTTATAAGAGCAGGCTGTCTTTTCCATCTGACATAACAAC
TTTTTGTTTTCATAACTTTTCATCTCCGATTCATTTATAGCTTTGATCCT
CGCTTCAGTTTCACTCGCTGTACAGCAAAAATGATGATAACGAAAGAAGA
CCGGGCAGTGTGTGGTCTAAGTTTATATGTTATGATTTTATATTTTGATT
TGTAAAGAGTTATGTTATACCAAATACTTTTTTTGTAAATATGAGAAAAT
TTTGATCATTGAATAAGTTCCAATCTAAATTAATTTAATACTCATCCCCA
ATCTGGATGAAAAAGATAAAAGCGGTGCGCTAACCTAGGCAGATTCTATT
ACGGAGCCACGGCTTTTAGAGATAATACTTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019687-exon-sc0000333-1575043694:235346..235777 | TCONS_00019687-exon-sc0000333-1575043694:235346..235777 | Clytia hemisphaerica | exon |
| TCONS_00019687-exon-sc0000333-1575043694:232745..233037 | TCONS_00019687-exon-sc0000333-1575043694:232745..233037 | Clytia hemisphaerica | exon |
| TCONS_00019687-exon-sc0000333-1510915933:235346..235777 | TCONS_00019687-exon-sc0000333-1510915933:235346..235777 | Clytia hemisphaerica | exon |
| TCONS_00019687-exon-sc0000333-1510915933:232745..233037 | TCONS_00019687-exon-sc0000333-1510915933:232745..233037 | Clytia hemisphaerica | exon |
| TCONS_00019687-exon-sc0000333-1491911889:235346..235777 | TCONS_00019687-exon-sc0000333-1491911889:235346..235777 | Clytia hemisphaerica | exon |
| TCONS_00019687-exon-sc0000333-1491911889:232745..233037 | TCONS_00019687-exon-sc0000333-1491911889:232745..233037 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000333 | supercontig | sc0000333:232745..235777 - |
Blast
The following BLAST results are available for this feature:
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