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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019489 ID=TCONS_00019489|Name=TCONS_00019489|organism=Clytia hemisphaerica|type=transcript|length=1713bp
aaaaaaactttgaactcTGTTATTTGTTTGCCCTTTTTCTTACTGACATT
TAATGAAATGATGGTTTAAAAGccttgattttttcattttttgcttatCT
TTCACAACACaggtataaataaaaaaatgaattggAAATAATGTATCCGA
GGTTAGCAAAGATACAGTAAATGAAATCATTTCTCAATGGATAACTCAGA
AGATTCAAAAGAGAGTgttgatcaaatcaaaaatgaGGTCCTCCAATTTC
TTCAACATGATTTACAAGCTGCTGAATTTTCATTGGCGATATTTTCTGCT
GCAATACTAAGTTATCGTAAAGATACTTGTTTACGTCCATTACCGGATTT
CCTTGATGCAGACTCTGGAGAGCAGCGCCTTGAAAAGCTGGTTTCCATCT
TTAACAACATTCCTCCACTGAAAAAGTTACCAACTAGTATATTGTCTGAT
GATTGCTGGCGTTTGTTGAAATGGATCTTAAAGAATCGACAGTGCTCTTT
CAAAACTGCTGGAAAAGCGAAAcTAGAAGATATTTTCCAAAAGACTGGAG
AGTCAAGTTTTTCATTGGAGCCATGTCAAATCTTTGAAGTTTGTTACAAT
ACCAGCATGTCAAAACGGTTTGATGACTTGAAAGAGGAACATGGTTTGAA
GTATGGCTATCACGGCAGCCGATTAGataatttttattcaattataCAGA
ATGGGCTACAAGTTCACATGATGAAAAATGGTATTTTTGGTGAGGGTGTT
TATCTTACAGACGACTTGGCAATTACCATGCCGTACACAAAGAGTGGTAT
TGTTTGGGATCACACATCGCTGGGTGAACAAGTATCTTGTGTTGCGTTCT
GTGAACTGATCGATCATCCAGGTGTTAAATGTCAAGTTGAAAATGATACC
TCAAAAACAAGAGCTACCGCTAAAAACTCTGAATCAGGCGAAGTTCCTGA
GCGTTATTTTGTTGTGACCAGCAGTGAACTTGTTCGAATCAAATATATTC
TGGTTTTTTCTACCAAAAAGAGTAACAAAAGGTCAGTCAAGAAACCCAGC
ATATGTTCACAATATCCAGTATTGACAATTCTTGTTGTTTATTTGGCATT
TCTATTACTGATGGGTTTTTGGAAGTCCAGAAGTTTCCAAATGTTTTATC
GAAAATGTTTTAGTGGTATGAATAATGATGACGAGGATGATAGCTTTGTG
TAGTTTTGTATTTGTATGACCTCTGACTTTTCAAGCAAAACCATTATAGA
GACCcccaagcggtttgcgtgatgtcGTGATAGGGGTTTTTTTCTAGCCT
GATTACGTAATTTTGAAATTGGCTTTCGTGATTGCTTGATCAGAGGTTAA
AACGTGAGCGTgattcgaaaaatttttgagCCGTGTGCGATTAATCCAAA
AGATACCGCTTGGGAGCCTCATTAATACAATTGGCCAAAAGAGTTTTGCT
GCCTTTTTTATGACATGGTCTTTCGACAGTACAATCGCTTACATGCATGC
TCTTACAGAGTGAAAGCCTTGtgattataaaaaagaaaaatttaatctat
AGCAGATTTACCAAGAACTTGTGGCCAGgatttttaaaatctatttgGTT
CCTCTGATTCTTCCATAGACTTGATTCTTAGATCATCCTAATGATCGAGT
GCCaatttcaaaagtgtttttgtgggttcaaaagaaatctttttaccAAA
AACTAATAATTTC Run BLAST on NCBI protein sequence of TCONS_00019489-protein >TCONS_00019489-protein ID=TCONS_00019489-protein|Name=TCONS_00019489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
MDNSEDSKESVDQIKNEVLQFLQHDLQAAEFSLAIFSAAILSYRKDTCLR
PLPDFLDADSGEQRLEKLVSIFNNIPPLKKLPTSILSDDCWRLLKWILKN
RQCSFKTAGKAKLEDIFQKTGESSFSLEPCQIFEVCYNTSMSKRFDDLKE
EHGLKYGYHGSRLDNFYSIIQNGLQVHMMKNGIFGEGVYLTDDLAITMPY
TKSGIVWDHTSLGEQVSCVAFCELIDHPGVKCQVENDTSKTRATAKNSES
GEVPERYFVVTSSELVRIKYILVFSTKKSNKRSVKKPSICSQYPVLTILV
VYLAFLLLMGFWKSRSFQMFYRKCFSGMNNDDEDDSFV Run BLAST on NCBI transcript from alignment at sc0000328:311819..314990- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019489 ID=TCONS_00019489|Name=TCONS_00019489|organism=Clytia hemisphaerica|type=transcript|length=3172bp|location=Sequence derived from alignment at sc0000328:311819..314990- (Clytia hemisphaerica)
AAAAAAACTTTGAACTCTGTTATTTGTTTGCCCTTTTTCTTACTGACATT
TAATGAAATGATGGTTTAAAAGCCTTGATTTTTTCATTTTTTGCTTATCT
TTCACAACACAGGTATAAATAAAAAAATGAATTGGAAATAATGTATCCGA
GGTTAGCAAAGATACAGTAAATGAAATCATTTCTCAATGGATAACTCAGA
AGATTCAAAAGAGAGTGTTGATCAAATCAAAAATGAGGTCCTCCAATTTC
TTCAACATGATTTACAAGCTGCTGAATTTTCATTGGCGATATTTTCTGCT
GCAATACTAAGTTATCGTAAAGATACTTGTTTACGTCCATTACCGGATTT
CCTTGATGCAGACTCTGGAGAGCAGCGCCTTGAAAAGCTGGTATTGATAT
GTTAATATTGTAAAGCACGCCCATTGATGTTTCTTTCTTTTTGTAGCATG
CATTCACACAGATTCACTAATGACTTAAGACTAGATATCTTCTTAAGTGA
ATTTTTAATCCACAACCAACAGCTTATCTGCTGTTGTGACAAAAAAGTTT
ATTTCCTCTTTTTAGGTTTCCATCTTTAACAACATTCCTCCACTGAAAAA
GTTACCAACTAGTATATTGTCTGATGATTGCTGGCGTTTGTTGAAATGGA
TCTTAAAGAATCGACAGTGCTCTTTCAAAACTGCTGGAAAAGCGAAAGTA
TCATGTTTTTTCTTTTGCTTTTCGATGATATCTTTGTTTGGCCTTAGTTT
TATTGTCCTGAACAGTATTGGCTGCTTATTGAATAGGTCAGAAACTACTG
TCTCTAATTAGAACTGATTTATTTTTAGCCAAGTATTGCTTTGTCATCAG
TTCTAAGCATAGATACTCCCCAGATGACTCTGCAGGTGCTGGTAAAGCTA
CACTGAATTTCAATATTTCCCATAATCTCAAGCTTTTTTATAAGACTGCT
ATATTATCCTGGTAAGTTTCTAAGCTGAAAAAATGGGGTGGGGTGTTCAT
TTAGTCATTAAAATCAGAATACAAACAATCTTTTAGGTTGATGCTCGTTT
GGTGTCGAAAGAAACTTCCTAAAATGACAGCAAATCCAACTAGTAAACTG
GAGTAATTGCATGATCTCCCTGTATGAAAGCTAAAGTAGAAAGTTGTCTA
CATAAATTGTTAATAAACCTGCCAATCAGAAAATGTTTTTTCTCTTTTAG
CTAGAAGATATTTTCCAAAAGACTGGAGAGTCAAGTTTTTCATTGGAGCC
ATGTCAAATCTTTGAAGTTTGTTACAATACCAGCATGTCAAAACGGTTTG
ATGACTTGAAAGAGGAACATGGTTTGAAGTATGGCTATCACGGCAGCCGA
TTAGATAATTTTTATTCAATTATACAGAATGGGCTACAAGTTCACATGAT
GAAAGTATGAATTGTTTTCTTGTTGGTCTGTAGAATGGAAAATCTAGAAA
TATTCCTCGTTTTTTATATGTAGGGAATGAATAGTGTTCTTATTGATTGT
CAGAAATGAGGACATTCTATTATTATGTGGGGTTTGGTAGAAATATAGTT
TTTTGTTAAATTGCAAGGACTTTTTTTAGTTTCCCATTATAAAACTCATC
CTCATTTGGCTATTATATTTTTTCATTCAATTCAAATGACTCTACACTAA
ATACTTTCAGAATGGTATTTTTGGTGAGGGTGTTTATCTTACAGACGACT
TGGCAATTACCATGCCGTACACAAAGAGTGGTATTGTTTGGGATCACACA
TCGCTGGGTGAACAAGTATCTTGTGTTGCGTTCTGTGAACTGATCGATCA
TCCAGGTGTTAAATGTCAAGTTGAAAATGATACCTCAAAAACAAGAGCTA
CCGCTAAAAACTCTGAATCAGGCGAAGTTCCTGAGCGTTATTTTGTTGTG
ACCAGCAGTGAACTTGTTCGAATCAAATATATTCTGGTTTTTTCTACCAA
AAAGAGTAACAAAAGGTAATGTTTTACCAGAATTGGGAAAAGGTTACTTT
TTAAAATTTCCACTAAAAGGGAATTCCTATCTGTTTTTATAGACAAATAA
AAAAAAAACAGGAGGTAAATTATGTCATGATATCAATAAAATTCTTTCTT
TTACCTACAGTAATTCAACTATTTCAAACTACTTGTTATTCTGTTAAATC
CGAGGTTTATTTATTTAGCTTTAGACACTAGATAGGCTAACTGTTTTAAC
AGATTTACTGTGAATATGTGCCCAGTTTTATGGTCAACTAGTGCGCCATG
TTGTTTTCTATGTACATTTTTTGAACATTTGAATTTCAAATCATATGAAT
CCCGTTGTTGACAACCAGATTGAAATACAAGATAGTTAGGTCTTTCTGCA
GCCCAACCTAATCAAGTAGTTAGAGATCAATGGTTAAAACCCTTATGACT
TCCCCAAGGCAAAACCTTTGGATCTACTTGGCCTATTGTTCTTACTGTTA
ATGATGTACTCAATAACCTTTGACATTTTTTTGGATTTAGGTCAGTCAAG
AAACCCAGCATATGTTCACAATATCCAGTATTGACAATTCTTGTTGTTTA
TTTGGCATTTCTATTACTGATGGGTTTTTGGAAGTCCAGAAGTTTCCAAA
TGTTTTATCGAAAATGTTTTAGTGGTATGAATAATGATGACGAGGATGAT
AGCTTTGTGTAGTTTTGTATTTGTATGACCTCTGACTTTTCAAGCAAAAC
CATTATAGAGACCCCCAAGCGGTTTGCGTGATGTCGTGATAGGGGTTTTT
TTCTAGCCTGATTACGTAATTTTGAAATTGGCTTTCGTGATTGCTTGATC
AGAGGTTAAAACGTGAGCGTGATTCGAAAAATTTTTGAGCCGTGTGCGAT
TAATCCAAAAGATACCGCTTGGGAGCCTCATTAATACAATTGGCCAAAAG
AGTTTTGCTGCCTTTTTTATGACATGGTCTTTCGACAGTACAATCGCTTA
CATGCATGCTCTTACAGAGTGAAAGCCTTGTGATTATAAAAAAGAAAAAT
TTAATCTATAGCAGATTTACCAAGAACTTGTGGCCAGGATTTTTAAAATC
TATTTGGTTCCTCTGATTCTTCCATAGACTTGATTCTTAGATCATCCTAA
TGATCGAGTGCCAATTTCAAAAGTGTTTTTGTGGGTTCAAAAGAAATCTT
TTTACCAAAAACTAATAATTTC Coding sequence (CDS) from alignment at sc0000328:311819..314990- >TCONS_00019489 ID=TCONS_00019489|Name=TCONS_00019489|organism=Clytia hemisphaerica|type=CDS|length=5085bp|location=Sequence derived from alignment at sc0000328:311819..314990- (Clytia hemisphaerica)
GTCAGTCAAGAAACCCAGCATATGTTCACAATATCCAGTATTGACAATTC
TTGTTGTTTATTTGGCATTTCTATTACTGATGGGTTTTTGGAAGTCCAGA
AGTTTCCAAATGTTTTATCGAAAATGTTTTAGTGGTATGAATAATGATGA
CGAGGATGATAGCTTTGTGTAGAATGGTATTTTTGGTGAGGGTGTTTATC
TTACAGACGACTTGGCAATTACCATGCCGTACACAAAGAGTGGTATTGTT
TGGGATCACACATCGCTGGGTGAACAAGTATCTTGTGTTGCGTTCTGTGA
ACTGATCGATCATCCAGGTGTTAAATGTCAAGTTGAAAATGATACCTCAA
AAACAAGAGCTACCGCTAAAAACTCTGAATCAGGCGAAGTTCCTGAGCGT
TATTTTGTTGTGACCAGCAGTGAACTTGTTCGAATCAAATATATTCTGGT
TTTTTCTACCAAAAAGAGTAACAAAAGCTAGAAGATATTTTCCAAAAGAC
TGGAGAGTCAAGTTTTTCATTGGAGCCATGTCAAATCTTTGAAGTTTGTT
ACAATACCAGCATGTCAAAACGGTTTGATGACTTGAAAGAGGAACATGGT
TTGAAGTATGGCTATCACGGCAGCCGATTAGATAATTTTTATTCAATTAT
ACAGAATGGGCTACAAGTTCACATGATGAAAGTTTCCATCTTTAACAACA
TTCCTCCACTGAAAAAGTTACCAACTAGTATATTGTCTGATGATTGCTGG
CGTTTGTTGAAATGGATCTTAAAGAATCGACAGTGCTCTTTCAAAACTGC
TGGAAAAGCGAAAATGGATAACTCAGAAGATTCAAAAGAGAGTGTTGATC
AAATCAAAAATGAGGTCCTCCAATTTCTTCAACATGATTTACAAGCTGCT
GAATTTTCATTGGCGATATTTTCTGCTGCAATACTAAGTTATCGTAAAGA
TACTTGTTTACGTCCATTACCGGATTTCCTTGATGCAGACTCTGGAGAGC
AGCGCCTTGAAAAGCTGGTCAGTCAAGAAACCCAGCATATGTTCACAATA
TCCAGTATTGACAATTCTTGTTGTTTATTTGGCATTTCTATTACTGATGG
GTTTTTGGAAGTCCAGAAGTTTCCAAATGTTTTATCGAAAATGTTTTAGT
GGTATGAATAATGATGACGAGGATGATAGCTTTGTGTAGAATGGTATTTT
TGGTGAGGGTGTTTATCTTACAGACGACTTGGCAATTACCATGCCGTACA
CAAAGAGTGGTATTGTTTGGGATCACACATCGCTGGGTGAACAAGTATCT
TGTGTTGCGTTCTGTGAACTGATCGATCATCCAGGTGTTAAATGTCAAGT
TGAAAATGATACCTCAAAAACAAGAGCTACCGCTAAAAACTCTGAATCAG
GCGAAGTTCCTGAGCGTTATTTTGTTGTGACCAGCAGTGAACTTGTTCGA
ATCAAATATATTCTGGTTTTTTCTACCAAAAAGAGTAACAAAAGCTAGAA
GATATTTTCCAAAAGACTGGAGAGTCAAGTTTTTCATTGGAGCCATGTCA
AATCTTTGAAGTTTGTTACAATACCAGCATGTCAAAACGGTTTGATGACT
TGAAAGAGGAACATGGTTTGAAGTATGGCTATCACGGCAGCCGATTAGAT
AATTTTTATTCAATTATACAGAATGGGCTACAAGTTCACATGATGAAAGT
TTCCATCTTTAACAACATTCCTCCACTGAAAAAGTTACCAACTAGTATAT
TGTCTGATGATTGCTGGCGTTTGTTGAAATGGATCTTAAAGAATCGACAG
TGCTCTTTCAAAACTGCTGGAAAAGCGAAAATGGATAACTCAGAAGATTC
AAAAGAGAGTGTTGATCAAATCAAAAATGAGGTCCTCCAATTTCTTCAAC
ATGATTTACAAGCTGCTGAATTTTCATTGGCGATATTTTCTGCTGCAATA
CTAAGTTATCGTAAAGATACTTGTTTACGTCCATTACCGGATTTCCTTGA
TGCAGACTCTGGAGAGCAGCGCCTTGAAAAGCTGGTCAGTCAAGAAACCC
AGCATATGTTCACAATATCCAGTATTGACAATTCTTGTTGTTTATTTGGC
ATTTCTATTACTGATGGGTTTTTGGAAGTCCAGAAGTTTCCAAATGTTTT
ATCGAAAATGTTTTAGTGGTATGAATAATGATGACGAGGATGATAGCTTT
GTGTAGAATGGTATTTTTGGTGAGGGTGTTTATCTTACAGACGACTTGGC
AATTACCATGCCGTACACAAAGAGTGGTATTGTTTGGGATCACACATCGC
TGGGTGAACAAGTATCTTGTGTTGCGTTCTGTGAACTGATCGATCATCCA
GGTGTTAAATGTCAAGTTGAAAATGATACCTCAAAAACAAGAGCTACCGC
TAAAAACTCTGAATCAGGCGAAGTTCCTGAGCGTTATTTTGTTGTGACCA
GCAGTGAACTTGTTCGAATCAAATATATTCTGGTTTTTTCTACCAAAAAG
AGTAACAAAAGCTAGAAGATATTTTCCAAAAGACTGGAGAGTCAAGTTTT
TCATTGGAGCCATGTCAAATCTTTGAAGTTTGTTACAATACCAGCATGTC
AAAACGGTTTGATGACTTGAAAGAGGAACATGGTTTGAAGTATGGCTATC
ACGGCAGCCGATTAGATAATTTTTATTCAATTATACAGAATGGGCTACAA
GTTCACATGATGAAAGTTTCCATCTTTAACAACATTCCTCCACTGAAAAA
GTTACCAACTAGTATATTGTCTGATGATTGCTGGCGTTTGTTGAAATGGA
TCTTAAAGAATCGACAGTGCTCTTTCAAAACTGCTGGAAAAGCGAAAATG
GATAACTCAGAAGATTCAAAAGAGAGTGTTGATCAAATCAAAAATGAGGT
CCTCCAATTTCTTCAACATGATTTACAAGCTGCTGAATTTTCATTGGCGA
TATTTTCTGCTGCAATACTAAGTTATCGTAAAGATACTTGTTTACGTCCA
TTACCGGATTTCCTTGATGCAGACTCTGGAGAGCAGCGCCTTGAAAAGCT
GGTCAGTCAAGAAACCCAGCATATGTTCACAATATCCAGTATTGACAATT
CTTGTTGTTTATTTGGCATTTCTATTACTGATGGGTTTTTGGAAGTCCAG
AAGTTTCCAAATGTTTTATCGAAAATGTTTTAGTGGTATGAATAATGATG
ACGAGGATGATAGCTTTGTGTAGAATGGTATTTTTGGTGAGGGTGTTTAT
CTTACAGACGACTTGGCAATTACCATGCCGTACACAAAGAGTGGTATTGT
TTGGGATCACACATCGCTGGGTGAACAAGTATCTTGTGTTGCGTTCTGTG
AACTGATCGATCATCCAGGTGTTAAATGTCAAGTTGAAAATGATACCTCA
AAAACAAGAGCTACCGCTAAAAACTCTGAATCAGGCGAAGTTCCTGAGCG
TTATTTTGTTGTGACCAGCAGTGAACTTGTTCGAATCAAATATATTCTGG
TTTTTTCTACCAAAAAGAGTAACAAAAGCTAGAAGATATTTTCCAAAAGA
CTGGAGAGTCAAGTTTTTCATTGGAGCCATGTCAAATCTTTGAAGTTTGT
TACAATACCAGCATGTCAAAACGGTTTGATGACTTGAAAGAGGAACATGG
TTTGAAGTATGGCTATCACGGCAGCCGATTAGATAATTTTTATTCAATTA
TACAGAATGGGCTACAAGTTCACATGATGAAAGTTTCCATCTTTAACAAC
ATTCCTCCACTGAAAAAGTTACCAACTAGTATATTGTCTGATGATTGCTG
GCGTTTGTTGAAATGGATCTTAAAGAATCGACAGTGCTCTTTCAAAACTG
CTGGAAAAGCGAAAATGGATAACTCAGAAGATTCAAAAGAGAGTGTTGAT
CAAATCAAAAATGAGGTCCTCCAATTTCTTCAACATGATTTACAAGCTGC
TGAATTTTCATTGGCGATATTTTCTGCTGCAATACTAAGTTATCGTAAAG
ATACTTGTTTACGTCCATTACCGGATTTCCTTGATGCAGACTCTGGAGAG
CAGCGCCTTGAAAAGCTGGTCAGTCAAGAAACCCAGCATATGTTCACAAT
ATCCAGTATTGACAATTCTTGTTGTTTATTTGGCATTTCTATTACTGATG
GGTTTTTGGAAGTCCAGAAGTTTCCAAATGTTTTATCGAAAATGTTTTAG
TGGTATGAATAATGATGACGAGGATGATAGCTTTGTGTAGAATGGTATTT
TTGGTGAGGGTGTTTATCTTACAGACGACTTGGCAATTACCATGCCGTAC
ACAAAGAGTGGTATTGTTTGGGATCACACATCGCTGGGTGAACAAGTATC
TTGTGTTGCGTTCTGTGAACTGATCGATCATCCAGGTGTTAAATGTCAAG
TTGAAAATGATACCTCAAAAACAAGAGCTACCGCTAAAAACTCTGAATCA
GGCGAAGTTCCTGAGCGTTATTTTGTTGTGACCAGCAGTGAACTTGTTCG
AATCAAATATATTCTGGTTTTTTCTACCAAAAAGAGTAACAAAAGCTAGA
AGATATTTTCCAAAAGACTGGAGAGTCAAGTTTTTCATTGGAGCCATGTC
AAATCTTTGAAGTTTGTTACAATACCAGCATGTCAAAACGGTTTGATGAC
TTGAAAGAGGAACATGGTTTGAAGTATGGCTATCACGGCAGCCGATTAGA
TAATTTTTATTCAATTATACAGAATGGGCTACAAGTTCACATGATGAAAG
TTTCCATCTTTAACAACATTCCTCCACTGAAAAAGTTACCAACTAGTATA
TTGTCTGATGATTGCTGGCGTTTGTTGAAATGGATCTTAAAGAATCGACA
GTGCTCTTTCAAAACTGCTGGAAAAGCGAAAATGGATAACTCAGAAGATT
CAAAAGAGAGTGTTGATCAAATCAAAAATGAGGTCCTCCAATTTCTTCAA
CATGATTTACAAGCTGCTGAATTTTCATTGGCGATATTTTCTGCTGCAAT
ACTAAGTTATCGTAAAGATACTTGTTTACGTCCATTACCGGATTTCCTTG
ATGCAGACTCTGGAGAGCAGCGCCTTGAAAAGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019489-exon-sc0000328-1575043694:314601..314990 | TCONS_00019489-exon-sc0000328-1575043694:314601..314990 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1575043694:314294..314425 | TCONS_00019489-exon-sc0000328-1575043694:314294..314425 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1575043694:313587..313790 | TCONS_00019489-exon-sc0000328-1575043694:313587..313790 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1575043694:313026..313330 | TCONS_00019489-exon-sc0000328-1575043694:313026..313330 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1575043694:311819..312500 | TCONS_00019489-exon-sc0000328-1575043694:311819..312500 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1510915933:314601..314990 | TCONS_00019489-exon-sc0000328-1510915933:314601..314990 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1510915933:314294..314425 | TCONS_00019489-exon-sc0000328-1510915933:314294..314425 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1510915933:313587..313790 | TCONS_00019489-exon-sc0000328-1510915933:313587..313790 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1510915933:313026..313330 | TCONS_00019489-exon-sc0000328-1510915933:313026..313330 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1510915933:311819..312500 | TCONS_00019489-exon-sc0000328-1510915933:311819..312500 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1491911889:314601..314990 | TCONS_00019489-exon-sc0000328-1491911889:314601..314990 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1491911889:314294..314425 | TCONS_00019489-exon-sc0000328-1491911889:314294..314425 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1491911889:313587..313790 | TCONS_00019489-exon-sc0000328-1491911889:313587..313790 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1491911889:313026..313330 | TCONS_00019489-exon-sc0000328-1491911889:313026..313330 | Clytia hemisphaerica | exon |
| TCONS_00019489-exon-sc0000328-1491911889:311819..312500 | TCONS_00019489-exon-sc0000328-1491911889:311819..312500 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000328 | supercontig | sc0000328:311819..314990 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012317 | Poly(ADP-ribose)pol_cat_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003950 | NAD+ ADP-ribosyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003950 |
NAD+ ADP-ribosyltransferase activity |
Blast
BLAST of TCONS_00019489 vs. Swiss-Prot (Human)
Match: PAR16 (Mono [ADP-ribose] polymerase PARP16 OS=Homo sapiens GN=PARP16 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.058e-61 Identity = 120/308 (38.96%), Postives = 187/308 (60.71%), Query Frame = 1
Query: 259 DLQAAEFSLAIFSAAILSYRKDTCLRPLP-DFLDADSGEQRLEKLVSIFNNIPPLKKLPTSILSDD--CWRLLKWILKNRQCSFKTAGKAKLEDIFQKTGESSFSL-EPCQIFEVCYNTSMSKRFDDLKEEHGLKYGYHGSRLDNFYSIIQNGLQVHMMKNGIFGEGVYLTDDLAITMPYTKSGIVWDHTSLGEQVSCVAFCELIDHPGVKCQVENDTSKT----RATAKNSESGEVPERYFVVTSSELVRIKYILVFSTKKSNKRSVKKPSICSQYPVLTILVVYLAFLLLMGFWKSRSFQMFYRKC 1158
D+ AA+ ++F++A+ SY++D+ LRP P + D + E L++ + +P LK+L S + W L+ WIL ++ + +AGKA+ E I + TG + P +FE+ Y + +F + K E L Y +HGSRL+NF+SII NGL H+ K +FGEG YLT DL++ + Y+ G W H+ LG +SCVA CE+IDHP VKCQ + SK RA K+SE G++P +YFVVT+++L+R+KY+LV+S +K KR+ + S S + ++ +YL LL++ S +FQ F+ +
Sbjct: 16 DMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKD--FEALLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDVKCQTKKKDSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYS-QKPPKRASSQLSWFSSHWFTVMISLYLLLLLIVSVINSSAFQHFWNRA 320
The following BLAST results are available for this feature:
|
