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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019440 ID=TCONS_00019440|Name=TCONS_00019440|organism=Clytia hemisphaerica|type=transcript|length=1175bp
taggAAAAACATATAACATAAATGCATTTTGGCGTCAAAGATGTTATCCG
TCGTGTACGGACTTACAGCGGATCACGTAGTCGATCAAGCTCCGTTGGGA
GCAATGGCAGTCGTGGAAGTCGATCTTCAACAAATATCAACATTGTTAAC
CACGGAGAAATGAAAATCCTAGTAATGGGAAGTCACGATGTCGGAAAAAC
GACGATTTGTAAAACATATGTCGGTTTAGAGGACGGTGATGATGATCTAT
GTCTTCACGATCATGATATACCTTACGACACGAGTGTCTTTATTGACGGC
GATAACGGTGATATCCAACAATACGATTTAGAGATTTACGACTACGATCC
CGACGCGTCGCCGATTAAAAATCGTAAATTGATCGGTGAGTGTGACGCAT
TCTTATTGGTTTATTCGATAACGAGCAAACAAAGCTTCTTAAAACTATTG
GAAATGAAGCAAGATGTTTCACATATTAAAGGTGCTGGCAATCATCCTAT
CATGTTTGCAGTTGGCAATAAGTCAGATCTTATGTTAGATTCCGAACGTG
TTATTAAGGACGATGACCTTTGGTCTTTGAATATGGATCAAATTGATGTG
TCAGCAAAATCGAATGAAGGAATACAAACTGCCTTTAAAACTTTAACGAA
TGAATGTGCGAAACGAAAGCATAATGAGAAAAGGCCATCACAATGATTGC
CATTGCAATGATTACCTGTTCCAAAAACCTGATGGGGggaaatatcctac
aatttcagctCAACAGGAAATTCACTTTGATTTCCCCCATTTATATAATT
CAATGGTAGAAATTAAACTCCAAACCCATGCCCATTGAACTTTAGAATTT
CTAACCCCGTTTGGATTTCGATATGAATTTTCATCTCTACGATATGAGAA
GaacttccaccggggctgtgagacattggtaaaatataaaattgagGATT
CGAAAGAGATTGTAGAATATTCTACATCAAGAAGGTTGCCCATTGCTCCA
TATACTGTATCATTTACTagctatatttttgacattttacggAATGAAAA
GTTATAGAGACTTTAATAAGTTAAAGCTAGGAATAAATGACTAtgtaaaa
ttaaaattgacttaaaatggaaagatatatttattttcatgtatttaTTT
GTGAAGAAATACAGAACCCACTTAG Run BLAST on NCBI protein sequence of TCONS_00019440-protein >TCONS_00019440-protein ID=TCONS_00019440-protein|Name=TCONS_00019440-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MHFGVKDVIRRVRTYSGSRSRSSSVGSNGSRGSRSSTNINIVNHGEMKIL
VMGSHDVGKTTICKTYVGLEDGDDDLCLHDHDIPYDTSVFIDGDNGDIQQ
YDLEIYDYDPDASPIKNRKLIGECDAFLLVYSITSKQSFLKLLEMKQDVS
HIKGAGNHPIMFAVGNKSDLMLDSERVIKDDDLWSLNMDQIDVSAKSNEG
IQTAFKTLTNECAKRKHNEKRPSQ Run BLAST on NCBI transcript from alignment at sc0000326:173389..174563 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019440 ID=TCONS_00019440|Name=TCONS_00019440|organism=Clytia hemisphaerica|type=transcript|length=1175bp|location=Sequence derived from alignment at sc0000326:173389..174563 (Clytia hemisphaerica)
CTAAGTGGGTTCTGTATTTCTTCACAAAtaaatacatgaaaataaatata
tctttccattttaagtcaattttaattttacaTAGTCATTTATTCCTAGC
TTTAACTTATTAAAGTCTCTATAACTTTTCATTccgtaaaatgtcaaaaa
tatagctAGTAAATGATACAGTATATGGAGCAATGGGCAACCTTCTTGAT
GTAGAATATTCTACAATCTCTTTCGAATCctcaattttatattttaccaa
tgtctcacagccccggtggaagttCTTCTCATATCGTAGAGATGAAAATT
CATATCGAAATCCAAACGGGGTTAGAAATTCTAAAGTTCAATGGGCATGG
GTTTGGAGTTTAATTTCTACCATTGAATTATATAAATGGGGGAAATCAAA
GTGAATTTCCTGTTGagctgaaattgtaggatatttccCCCCATCAGGTT
TTTGGAACAGGTAATCATTGCAATGGCAATCATTGTGATGGCCTTTTCTC
ATTATGCTTTCGTTTCGCACATTCATTCGTTAAAGTTTTAAAGGCAGTTT
GTATTCCTTCATTCGATTTTGCTGACACATCAATTTGATCCATATTCAAA
GACCAAAGGTCATCGTCCTTAATAACACGTTCGGAATCTAACATAAGATC
TGACTTATTGCCAACTGCAAACATGATAGGATGATTGCCAGCACCTTTAA
TATGTGAAACATCTTGCTTCATTTCCAATAGTTTTAAGAAGCTTTGTTTG
CTCGTTATCGAATAAACCAATAAGAATGCGTCACACTCACCGATCAATTT
ACGATTTTTAATCGGCGACGCGTCGGGATCGTAGTCGTAAATCTCTAAAT
CGTATTGTTGGATATCACCGTTATCGCCGTCAATAAAGACACTCGTGTCG
TAAGGTATATCATGATCGTGAAGACATAGATCATCATCACCGTCCTCTAA
ACCGACATATGTTTTACAAATCGTCGTTTTTCCGACATCGTGACTTCCCA
TTACTAGGATTTTCATTTCTCCGTGGTTAACAATGTTGATATTTGTTGAA
GATCGACTTCCACGACTGCCATTGCTCCCAACGGAGCTTGATCGACTACG
TGATCCGCTGTAAGTCCGTACACGACGGATAACATCTTTGACGCCAAAAT
GCATTTATGTTATATGTTTTTccta Coding sequence (CDS) from alignment at sc0000326:173389..174563 >TCONS_00019440 ID=TCONS_00019440|Name=TCONS_00019440|organism=Clytia hemisphaerica|type=CDS|length=675bp|location=Sequence derived from alignment at sc0000326:173389..174563 (Clytia hemisphaerica)
TCATTGTGATGGCCTTTTCTCATTATGCTTTCGTTTCGCACATTCATTCG
TTAAAGTTTTAAAGGCAGTTTGTATTCCTTCATTCGATTTTGCTGACACA
TCAATTTGATCCATATTCAAAGACCAAAGGTCATCGTCCTTAATAACACG
TTCGGAATCTAACATAAGATCTGACTTATTGCCAACTGCAAACATGATAG
GATGATTGCCAGCACCTTTAATATGTGAAACATCTTGCTTCATTTCCAAT
AGTTTTAAGAAGCTTTGTTTGCTCGTTATCGAATAAACCAATAAGAATGC
GTCACACTCACCGATCAATTTACGATTTTTAATCGGCGACGCGTCGGGAT
CGTAGTCGTAAATCTCTAAATCGTATTGTTGGATATCACCGTTATCGCCG
TCAATAAAGACACTCGTGTCGTAAGGTATATCATGATCGTGAAGACATAG
ATCATCATCACCGTCCTCTAAACCGACATATGTTTTACAAATCGTCGTTT
TTCCGACATCGTGACTTCCCATTACTAGGATTTTCATTTCTCCGTGGTTA
ACAATGTTGATATTTGTTGAAGATCGACTTCCACGACTGCCATTGCTCCC
AACGGAGCTTGATCGACTACGTGATCCGCTGTAAGTCCGTACACGACGGA
TAACATCTTTGACGCCAAAATGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019440-exon-sc0000326-1491911889:173389..174563 | TCONS_00019440-exon-sc0000326-1491911889:173389..174563 | Clytia hemisphaerica | exon |
| TCONS_00019440-exon-sc0000326-1510915933:173389..174563 | TCONS_00019440-exon-sc0000326-1510915933:173389..174563 | Clytia hemisphaerica | exon |
| TCONS_00019440-exon-sc0000326-1575043694:173389..174563 | TCONS_00019440-exon-sc0000326-1575043694:173389..174563 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000326 | supercontig | sc0000326:173389..174563 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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