TCONS_00019186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019186
Unique NameTCONS_00019186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019186 ID=TCONS_00019186|Name=TCONS_00019186|organism=Clytia hemisphaerica|type=transcript|length=1160bp
TTTTGATTTAGTATgcatttctgtttatttttattttttaagagcAGTAA
CTTTCTTGATATGTCTTCtcgtttcataaaaaaaatacaataaaatagTA
ATGGTGATAAATTATTTGGCCCGAAGAACACTTGCACGATTTATATCGCA
AAGAAGAACATACTCTACATCACGGAGGGATCTGTTAGTAACCAGTAGAA
GACTGGTGATAGCTGGAAGCAGTGGCCTACTTTTCACAGCTGGTTTATTA
ACACGGGGAAAATGTGATGATGGAAAGAGCTTGAGTCAGGAAAAGACTGT
TGTTTCTGAGACAGCTGATTGGGTACATGATTTGTACGTGGAACAGATTT
TACATAGCAGTTTGTTCCGGTTTGGCAGAGCGGCTTATGTTGTATTATCA
GTGTTCGCTGATTACAAATCATCGTTGAGAAATGTCACAGACGAAGTAGA
ATATGCCAAACTCAAATCTGAGTGTCACCTTCGATCAGCTatcaaatttc
gcgatttatgTTCAGCCAATGGGGGCGTGTTCATGAAAGTGGGTCAACAT
ATTGGCTCACTGGAGTTCCTTTTTCCAAAAGAGTACACAGAAACACTGAG
AATTTTCCAGTACGAAGCACCACACAGCCCAATGAAAGACATCAAGTATG
TCATCGAATCGGACACTGGGAAGTCCATGTATGacctgtttgaaagtttc
gaTGAAAAACCATTAGGTGCTGCCTCGCTTGCTCAGGTCCACAAAGCCGT
GTTGAAAGATGGTAAGGAAGTAGCAGTGAAGATCCAACACAAGACTGTCA
AACAACATGCTTTCGAAGATGCAAAAGTTATCGAATTTTTCGTGAGAATG
GCAACCAAGATCTTTCCCGAATTTCAATTCCAATGGCTGACGGACCAAAT
CAAAGCGAACCTTCCACTTGAATTGGATTTCTTGAATGAAGGAAAGAATT
GTGAGAAGATGAGagatgttttgaaagattttactGGAATCAGGGTACCT
GAGGTGTATTGGAAGAATTCGACGCATCGCGTGTTNTGATAACTTATTTC
AACCAGCAATATTACGGTTTAcaaccatcctttccatttattcttgaatt
agaactaccttAGGGAAAACAACAAGCgttaaattcatcaaattacagct
ttttatACTT
Run BLAST on NCBI

protein sequence of TCONS_00019186-protein

>TCONS_00019186-protein ID=TCONS_00019186-protein|Name=TCONS_00019186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MVINYLARRTLARFISQRRTYSTSRRDLLVTSRRLVIAGSSGLLFTAGLL
TRGKCDDGKSLSQEKTVVSETADWVHDLYVEQILHSSLFRFGRAAYVVLS
VFADYKSSLRNVTDEVEYAKLKSECHLRSAIKFRDLCSANGGVFMKVGQH
IGSLEFLFPKEYTETLRIFQYEAPHSPMKDIKYVIESDTGKSMYDLFESF
DEKPLGAASLAQVHKAVLKDGKEVAVKIQHKTVKQHAFEDAKVIEFFVRM
ATKIFPEFQFQWLTDQIKANLPLELDFLNEGKNCEKMRDVLKDFTGIRVP
EVYWKNSTHRVX
Run BLAST on NCBI

transcript from alignment at sc0000320:281965..284495-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019186 ID=TCONS_00019186|Name=TCONS_00019186|organism=Clytia hemisphaerica|type=transcript|length=2531bp|location=Sequence derived from alignment at sc0000320:281965..284495- (Clytia hemisphaerica)
TTTTGATTTAGTATGCATTTCTGTTTATTTTTATTTTTTAAGAGCAGTAA
CTTTCTTGATATGTCTTCTCGTTTCATAAAAAAAATACAATAAAATAGTA
ATGGTGATAAATTATTTGGCCCGAAGAACACTTGCACGATTTATATCGCA
AAGAAGAACATACTCTACATCACGGAGGGATCTGTTAGTAACCAGTAGAA
GACTGGTGATAGCTGGAAGCAGTGGCCTACTTTTCACAGCTGGTTTATTA
ACACGGGGAAAATGTGATGATGGAAAGAGCTTGAGTCAGGAAAAGACTGT
TGTTTCTGAGACAGCTGATTGGGTACATGATTTGTACGTGGAACAGATTT
TACATAGCAGTTTGTTCCGGTTTGGCAGAGCGGCTTATGTTGTAAGTTTC
ACTTTTTTAATTTATTTTACTAACTTCTAGTAATGAAATGCAGTGTTTTT
CTTTTTGACATTACTCGATTGCCCTGTAAATCTTCACTTGGAATTGATAT
TGAAGGAATTCAAGAGCTCTTAGTGAACATCATTGTTTTTGGAATTCAGG
ACAGTGATATAAAGACTTTCAACACGCATTCTTGTTGCAGGTATTATCAG
TGTTCGCTGATTACAAATCATCGTTGAGAAATGTCACAGACGAAGTAGAA
TATGCCAAACTCAAATCTGAGGTATTTAATTACCACGAATTTTCTGATCC
ATCACCAAGAACGGTCGAACACGTCTTTCTAAAATCTTTCATTTTTGTTT
GTTTATGATAATTATTGTTCAAGTTTTTGGAAATAACAATACTCACCTCA
CATGCTAAAGGTGTAGTTTAGTAGAGAACAGCTCCAGTTCGGTATGTACG
GGGGGGGGGGGTTTTCTAGCTTGGGTTCATTTTTTGAAAAGTCACAAGTC
GCCCAGATTTGCAGTACTTGCAATATCGTACCTTGAATTTTGATAATTAG
ACATTGATTGGAAAATCAGTTTTCAATTACCTCGATTCGTCTCCGATGAC
AGTCTAGGATCAAATTTTACTTTTTCTGTAGTGTCACCTTCGATCAGCTA
TCAAATTTCGCGATTTATGTTCAGCCAATGGGGGCGTGTTCATGAAAGTG
GGTCAACATATTGGCTCACTGGAGTTCCTTTTTCCAAAAGAGTACACAGA
AACACTGAGAATTTTCCAGTACGAAGCACCACACAGCCCAATGAAAGACA
TCAAGTATGTCATCGAATCGGACACTGGGAAGTCCATGTATGACCTGTTT
GAAAGTTTCGATGAAAAACCATTAGGTGCTGCCTCGCTTGCTCAGGTGAG
TGTTTTGAAAGTCTCAGGAAAGTTTTCAGCTTCACCCAATTCCATATAAT
TTTATTTTCACTAGCTGAATTTGGCAGCACTCTCCTCAAATCTCTCAGTA
CATATACGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCATTTATTCATTCATTCATTCATTAGTTTGTTCATTCATTCATT
CGTTTGTGCATTTATTCCTTTACTTGTTCACTCATTAATTTACTTGTTCA
CTCGTTAATTTACTCGTTCATTTTATTCATTCATCTTTTGTTTATGCAAC
AGGTCCACAAAGCCGTGTTGAAAGATGGTAAGGAAGTAGCAGTGAAGATC
CAACACAAGACTGTCAAACAACATGCTTTCGAAGATGCAAAAGTTATCGA
AGTAATCAGCAATTCTTGTATTTGGTTTATATTCTTTGAGTCTTACATAT
TAACACTTGGAAGAAAATTGTGGAGGATGTTCTTGGAGTTTTTTTTATCT
TTCGTCTTTCAATAAGGTATGAGAGCTTGTTCGAACAAAAATTAGCTCTT
AAACTGTTCAAACTCGAATTTTCAAGAATCATTTTATCTGAACAAAATCT
TTATTATTTTGCAATATCATTTCAGTTTTTCGTGAGAATGGCAACCAAGA
TCTTTCCCGAATTTCAATTCCAATGGCTGACGGACCAAATCAAAGCGAAC
CTTCCACTTGAATTGGATTTCTTGAATGAAGGAAAGAATTGTGAGAAGAT
GAGAGATGTTTTGAAAGATTTTACTGGAATCAGGGTATACTTGGTTTTTA
AAATATTTTTGAAATAATATAAATGGAATCACTAACGAAATATCACTGCA
CCACTTACTGCTTAGTACCTTTTTATTGTCAGAGAGCCTGTTTAACTGCA
AATTGTATTGTTTTGCCAACGAGATTGTCAAGGACCTTGAAGCATAGGAC
ATCTCAAGGTCTCTAATACATAAAAAGTCTGTATATCGGCATATTATCTT
TCTTTACTTTTTAAGGTACCTGAGGTGTATTGGAAGAATTCGACGCATCG
CGTGTTNTGATAACTTATTTCAACCAGCAATATTACGGTTTACAACCATC
CTTTCCATTTATTCTTGAATTAGAACTACCTTAGGGAAAACAACAAGCGT
TAAATTCATCAAATTACAGCTTTTTATACTT

Coding sequence (CDS) from alignment at sc0000320:281965..284495-

>TCONS_00019186 ID=TCONS_00019186|Name=TCONS_00019186|organism=Clytia hemisphaerica|type=CDS|length=5634bp|location=Sequence derived from alignment at sc0000320:281965..284495- (Clytia hemisphaerica)
GTACCTGAGGTGTATTGGAAGAATTCGACGCATCGCGTGTTNTGATTTTT
CGTGAGAATGGCAACCAAGATCTTTCCCGAATTTCAATTCCAATGGCTGA
CGGACCAAATCAAAGCGAACCTTCCACTTGAATTGGATTTCTTGAATGAA
GGAAAGAATTGTGAGAAGATGAGAGATGTTTTGAAAGATTTTACTGGAAT
CAGGGTCCACAAAGCCGTGTTGAAAGATGGTAAGGAAGTAGCAGTGAAGA
TCCAACACAAGACTGTCAAACAACATGCTTTCGAAGATGCAAAAGTTATC
GAATGTCACCTTCGATCAGCTATCAAATTTCGCGATTTATGTTCAGCCAA
TGGGGGCGTGTTCATGAAAGTGGGTCAACATATTGGCTCACTGGAGTTCC
TTTTTCCAAAAGAGTACACAGAAACACTGAGAATTTTCCAGTACGAAGCA
CCACACAGCCCAATGAAAGACATCAAGTATGTCATCGAATCGGACACTGG
GAAGTCCATGTATGACCTGTTTGAAAGTTTCGATGAAAAACCATTAGGTG
CTGCCTCGCTTGCTCAGGTATTATCAGTGTTCGCTGATTACAAATCATCG
TTGAGAAATGTCACAGACGAAGTAGAATATGCCAAACTCAAATCTGAGAT
GGTGATAAATTATTTGGCCCGAAGAACACTTGCACGATTTATATCGCAAA
GAAGAACATACTCTACATCACGGAGGGATCTGTTAGTAACCAGTAGAAGA
CTGGTGATAGCTGGAAGCAGTGGCCTACTTTTCACAGCTGGTTTATTAAC
ACGGGGAAAATGTGATGATGGAAAGAGCTTGAGTCAGGAAAAGACTGTTG
TTTCTGAGACAGCTGATTGGGTACATGATTTGTACGTGGAACAGATTTTA
CATAGCAGTTTGTTCCGGTTTGGCAGAGCGGCTTATGTTGTACCTGAGGT
GTATTGGAAGAATTCGACGCATCGCGTGTTNTGATTTTTCGTGAGAATGG
CAACCAAGATCTTTCCCGAATTTCAATTCCAATGGCTGACGGACCAAATC
AAAGCGAACCTTCCACTTGAATTGGATTTCTTGAATGAAGGAAAGAATTG
TGAGAAGATGAGAGATGTTTTGAAAGATTTTACTGGAATCAGGGTCCACA
AAGCCGTGTTGAAAGATGGTAAGGAAGTAGCAGTGAAGATCCAACACAAG
ACTGTCAAACAACATGCTTTCGAAGATGCAAAAGTTATCGAATGTCACCT
TCGATCAGCTATCAAATTTCGCGATTTATGTTCAGCCAATGGGGGCGTGT
TCATGAAAGTGGGTCAACATATTGGCTCACTGGAGTTCCTTTTTCCAAAA
GAGTACACAGAAACACTGAGAATTTTCCAGTACGAAGCACCACACAGCCC
AATGAAAGACATCAAGTATGTCATCGAATCGGACACTGGGAAGTCCATGT
ATGACCTGTTTGAAAGTTTCGATGAAAAACCATTAGGTGCTGCCTCGCTT
GCTCAGGTATTATCAGTGTTCGCTGATTACAAATCATCGTTGAGAAATGT
CACAGACGAAGTAGAATATGCCAAACTCAAATCTGAGATGGTGATAAATT
ATTTGGCCCGAAGAACACTTGCACGATTTATATCGCAAAGAAGAACATAC
TCTACATCACGGAGGGATCTGTTAGTAACCAGTAGAAGACTGGTGATAGC
TGGAAGCAGTGGCCTACTTTTCACAGCTGGTTTATTAACACGGGGAAAAT
GTGATGATGGAAAGAGCTTGAGTCAGGAAAAGACTGTTGTTTCTGAGACA
GCTGATTGGGTACATGATTTGTACGTGGAACAGATTTTACATAGCAGTTT
GTTCCGGTTTGGCAGAGCGGCTTATGTTGTACCTGAGGTGTATTGGAAGA
ATTCGACGCATCGCGTGTTNTGATTTTTCGTGAGAATGGCAACCAAGATC
TTTCCCGAATTTCAATTCCAATGGCTGACGGACCAAATCAAAGCGAACCT
TCCACTTGAATTGGATTTCTTGAATGAAGGAAAGAATTGTGAGAAGATGA
GAGATGTTTTGAAAGATTTTACTGGAATCAGGGTCCACAAAGCCGTGTTG
AAAGATGGTAAGGAAGTAGCAGTGAAGATCCAACACAAGACTGTCAAACA
ACATGCTTTCGAAGATGCAAAAGTTATCGAATGTCACCTTCGATCAGCTA
TCAAATTTCGCGATTTATGTTCAGCCAATGGGGGCGTGTTCATGAAAGTG
GGTCAACATATTGGCTCACTGGAGTTCCTTTTTCCAAAAGAGTACACAGA
AACACTGAGAATTTTCCAGTACGAAGCACCACACAGCCCAATGAAAGACA
TCAAGTATGTCATCGAATCGGACACTGGGAAGTCCATGTATGACCTGTTT
GAAAGTTTCGATGAAAAACCATTAGGTGCTGCCTCGCTTGCTCAGGTATT
ATCAGTGTTCGCTGATTACAAATCATCGTTGAGAAATGTCACAGACGAAG
TAGAATATGCCAAACTCAAATCTGAGATGGTGATAAATTATTTGGCCCGA
AGAACACTTGCACGATTTATATCGCAAAGAAGAACATACTCTACATCACG
GAGGGATCTGTTAGTAACCAGTAGAAGACTGGTGATAGCTGGAAGCAGTG
GCCTACTTTTCACAGCTGGTTTATTAACACGGGGAAAATGTGATGATGGA
AAGAGCTTGAGTCAGGAAAAGACTGTTGTTTCTGAGACAGCTGATTGGGT
ACATGATTTGTACGTGGAACAGATTTTACATAGCAGTTTGTTCCGGTTTG
GCAGAGCGGCTTATGTTGTACCTGAGGTGTATTGGAAGAATTCGACGCAT
CGCGTGTTNTGATTTTTCGTGAGAATGGCAACCAAGATCTTTCCCGAATT
TCAATTCCAATGGCTGACGGACCAAATCAAAGCGAACCTTCCACTTGAAT
TGGATTTCTTGAATGAAGGAAAGAATTGTGAGAAGATGAGAGATGTTTTG
AAAGATTTTACTGGAATCAGGGTCCACAAAGCCGTGTTGAAAGATGGTAA
GGAAGTAGCAGTGAAGATCCAACACAAGACTGTCAAACAACATGCTTTCG
AAGATGCAAAAGTTATCGAATGTCACCTTCGATCAGCTATCAAATTTCGC
GATTTATGTTCAGCCAATGGGGGCGTGTTCATGAAAGTGGGTCAACATAT
TGGCTCACTGGAGTTCCTTTTTCCAAAAGAGTACACAGAAACACTGAGAA
TTTTCCAGTACGAAGCACCACACAGCCCAATGAAAGACATCAAGTATGTC
ATCGAATCGGACACTGGGAAGTCCATGTATGACCTGTTTGAAAGTTTCGA
TGAAAAACCATTAGGTGCTGCCTCGCTTGCTCAGGTATTATCAGTGTTCG
CTGATTACAAATCATCGTTGAGAAATGTCACAGACGAAGTAGAATATGCC
AAACTCAAATCTGAGATGGTGATAAATTATTTGGCCCGAAGAACACTTGC
ACGATTTATATCGCAAAGAAGAACATACTCTACATCACGGAGGGATCTGT
TAGTAACCAGTAGAAGACTGGTGATAGCTGGAAGCAGTGGCCTACTTTTC
ACAGCTGGTTTATTAACACGGGGAAAATGTGATGATGGAAAGAGCTTGAG
TCAGGAAAAGACTGTTGTTTCTGAGACAGCTGATTGGGTACATGATTTGT
ACGTGGAACAGATTTTACATAGCAGTTTGTTCCGGTTTGGCAGAGCGGCT
TATGTTGTACCTGAGGTGTATTGGAAGAATTCGACGCATCGCGTGTTNTG
ATTTTTCGTGAGAATGGCAACCAAGATCTTTCCCGAATTTCAATTCCAAT
GGCTGACGGACCAAATCAAAGCGAACCTTCCACTTGAATTGGATTTCTTG
AATGAAGGAAAGAATTGTGAGAAGATGAGAGATGTTTTGAAAGATTTTAC
TGGAATCAGGGTCCACAAAGCCGTGTTGAAAGATGGTAAGGAAGTAGCAG
TGAAGATCCAACACAAGACTGTCAAACAACATGCTTTCGAAGATGCAAAA
GTTATCGAATGTCACCTTCGATCAGCTATCAAATTTCGCGATTTATGTTC
AGCCAATGGGGGCGTGTTCATGAAAGTGGGTCAACATATTGGCTCACTGG
AGTTCCTTTTTCCAAAAGAGTACACAGAAACACTGAGAATTTTCCAGTAC
GAAGCACCACACAGCCCAATGAAAGACATCAAGTATGTCATCGAATCGGA
CACTGGGAAGTCCATGTATGACCTGTTTGAAAGTTTCGATGAAAAACCAT
TAGGTGCTGCCTCGCTTGCTCAGGTATTATCAGTGTTCGCTGATTACAAA
TCATCGTTGAGAAATGTCACAGACGAAGTAGAATATGCCAAACTCAAATC
TGAGATGGTGATAAATTATTTGGCCCGAAGAACACTTGCACGATTTATAT
CGCAAAGAAGAACATACTCTACATCACGGAGGGATCTGTTAGTAACCAGT
AGAAGACTGGTGATAGCTGGAAGCAGTGGCCTACTTTTCACAGCTGGTTT
ATTAACACGGGGAAAATGTGATGATGGAAAGAGCTTGAGTCAGGAAAAGA
CTGTTGTTTCTGAGACAGCTGATTGGGTACATGATTTGTACGTGGAACAG
ATTTTACATAGCAGTTTGTTCCGGTTTGGCAGAGCGGCTTATGTTGTACC
TGAGGTGTATTGGAAGAATTCGACGCATCGCGTGTTNTGATTTTTCGTGA
GAATGGCAACCAAGATCTTTCCCGAATTTCAATTCCAATGGCTGACGGAC
CAAATCAAAGCGAACCTTCCACTTGAATTGGATTTCTTGAATGAAGGAAA
GAATTGTGAGAAGATGAGAGATGTTTTGAAAGATTTTACTGGAATCAGGG
TCCACAAAGCCGTGTTGAAAGATGGTAAGGAAGTAGCAGTGAAGATCCAA
CACAAGACTGTCAAACAACATGCTTTCGAAGATGCAAAAGTTATCGAATG
TCACCTTCGATCAGCTATCAAATTTCGCGATTTATGTTCAGCCAATGGGG
GCGTGTTCATGAAAGTGGGTCAACATATTGGCTCACTGGAGTTCCTTTTT
CCAAAAGAGTACACAGAAACACTGAGAATTTTCCAGTACGAAGCACCACA
CAGCCCAATGAAAGACATCAAGTATGTCATCGAATCGGACACTGGGAAGT
CCATGTATGACCTGTTTGAAAGTTTCGATGAAAAACCATTAGGTGCTGCC
TCGCTTGCTCAGGTATTATCAGTGTTCGCTGATTACAAATCATCGTTGAG
AAATGTCACAGACGAAGTAGAATATGCCAAACTCAAATCTGAGATGGTGA
TAAATTATTTGGCCCGAAGAACACTTGCACGATTTATATCGCAAAGAAGA
ACATACTCTACATCACGGAGGGATCTGTTAGTAACCAGTAGAAGACTGGT
GATAGCTGGAAGCAGTGGCCTACTTTTCACAGCTGGTTTATTAACACGGG
GAAAATGTGATGATGGAAAGAGCTTGAGTCAGGAAAAGACTGTTGTTTCT
GAGACAGCTGATTGGGTACATGATTTGTACGTGGAACAGATTTTACATAG
CAGTTTGTTCCGGTTTGGCAGAGCGGCTTATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010769XLOC_010769Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019186-proteinTCONS_00019186-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019186-exon-sc0000320-1575043694:284105..284495TCONS_00019186-exon-sc0000320-1575043694:284105..284495Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1575043694:283825..283905TCONS_00019186-exon-sc0000320-1575043694:283825..283905Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1575043694:283201..283464TCONS_00019186-exon-sc0000320-1575043694:283201..283464Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1575043694:282745..282843TCONS_00019186-exon-sc0000320-1575043694:282745..282843Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1575043694:282362..282520TCONS_00019186-exon-sc0000320-1575043694:282362..282520Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1575043694:281965..282130TCONS_00019186-exon-sc0000320-1575043694:281965..282130Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1510915933:284105..284495TCONS_00019186-exon-sc0000320-1510915933:284105..284495Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1510915933:283825..283905TCONS_00019186-exon-sc0000320-1510915933:283825..283905Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1510915933:283201..283464TCONS_00019186-exon-sc0000320-1510915933:283201..283464Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1510915933:282745..282843TCONS_00019186-exon-sc0000320-1510915933:282745..282843Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1510915933:282362..282520TCONS_00019186-exon-sc0000320-1510915933:282362..282520Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1510915933:281965..282130TCONS_00019186-exon-sc0000320-1510915933:281965..282130Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1491911889:284105..284495TCONS_00019186-exon-sc0000320-1491911889:284105..284495Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1491911889:283825..283905TCONS_00019186-exon-sc0000320-1491911889:283825..283905Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1491911889:283201..283464TCONS_00019186-exon-sc0000320-1491911889:283201..283464Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1491911889:282745..282843TCONS_00019186-exon-sc0000320-1491911889:282745..282843Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1491911889:282362..282520TCONS_00019186-exon-sc0000320-1491911889:282362..282520Clytia hemisphaericaexon
TCONS_00019186-exon-sc0000320-1491911889:281965..282130TCONS_00019186-exon-sc0000320-1491911889:281965..282130Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000320supercontigsc0000320:281965..284495 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.9275	24.3375	39.6187	43.143	20.2745	16.2199	27.4345	32.3293	26.3755	28.6201	23.6223	23.3795	13.3979	13.7335	15.019	18.3446	35.4267	35.2778	10.1918	14.8978	22.9027	23.6982	23.8679	25.2382	39.0121	31.6359	19.1826	17.0874	25.3407	23.6242
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004147UbiB_dom
IPR011009Kinase-like_dom
Blast
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BLAST of TCONS_00019186 vs. Swiss-Prot (Human)
Match: ADCK1 (Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.556e-71
Identity = 113/230 (49.13%), Postives = 157/230 (68.26%), Query Frame = 2 
Query:  368 RFGRAAYVVLSVFADYKSSLRNVT-DEVEYAKLKS-------ECHLRSAIKFRDLCSANGGVFMKVGQHIGSLEFLFPKEYTETLRIFQYEAPHSPMKDIKYVIESDTGKSMYDLFESFDEKPLGAASLAQVHKAVLKDGKEVAVKIQHKTVKQHAFEDAKVIEFFVRMATKIFPEFQFQWLTDQIKANLPLELDFLNEGKNCEKMRDVLKDFTGIRVPEVYWKNSTHRV 1033
            R GRA      +  DY +SL++V     EY +L+S       + HLRSA +  +LC AN G F+KVGQH+G+L++L P+EYT TL++   +AP S M++I+ VI  D GK ++DLF+SFD+ PLG ASLAQVHKAVL DG+ VAVK+QH  V+  + +D  ++E  V    ++FPEF+F WL D+ K NLPLELDFLNEG+N EK+  +L+ F  ++VP ++W  ST RV
Sbjct:   38 RVGRAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERV 267
The following BLAST results are available for this feature:
BLAST of TCONS_00019186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADCK11.556e-7149.13Uncharacterized aarF domain-containing protein kin... [more]
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