TCONS_00018988 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018988
Unique NameTCONS_00018988
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1234

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018988 ID=TCONS_00018988|Name=TCONS_00018988|organism=Clytia hemisphaerica|type=transcript|length=1234bp
TTCACAAACTTGCATAATATTAAAACAACAGCATGAATTATCTTTAAGAA
TGACAATAACAAAATCTCTATTATCTACACATCATGTCAAATACCCTCAT
GAGGAGAGGAGAGATGAATGGAATAGAAGTTGCTCGCTCAGTTTTCTCCT
CATGTGGATCATTTCTTGGCCTTGCTTACTTATTAAAAAAGAAGTCATTT
CCAAAGTACTTGAAGGATCCTGGTAGAAGGAACGCATGGTTGTGGCGAAA
CACATTTTGCTCTTTGATTCACTCGTGTGCATCTGCTGTGTGGACCTTTT
TCTGTTATTATGATGAGCCAAAACTATTGGGCGATATGGTGAACACAACA
ACGAACCTCTCAATACAACTTTTGTCCTTTTCAACAGGTTATTTCATGTA
TGATTTTCTGGATGTTGTTCTGAATGATGGCTTTCGACAAGTCTTTATCC
TTACTCATCACACAGCTGTAATCACTGCATTCTCGTTGGCACTCACTAAT
GAACGTTACATGGGTTTTGGTGTGTGTGCTTTGATCATGGAATTCAACAG
CATCTTCTTACACATCAGACGTTTGATGAAACTTGTCAATCATTCATCTG
GTTGGAAAAGCATCAATGGGGTTTTCTTATTGCTAACAATGCTCTTTTGT
CGTATCTGCTTATCCTGTTGGATGGTGAGATGGCTTTTGCAGAATAGAGA
CTTATTACAATACAGCCATTATGTTGTTGGGCTGGTTGGCATGGTGATTA
TGACAGTCACCAATGTGGGTCTCATGTACCGTCTTTGGATGTCTGATTTC
CATAAGAAATCAATCAACAAAAAAGTGCTTTCAGAAATCAAGAAATAACC
ACTACCTCCTCCATCACATATTATACTTCACAGATGTCACTCACATCAAT
GAAAGTACCTTTATTAACATCAACTTTCAATTCTGAGTAACGAAGGGAAC
GGTTCAATATGAGATGACCACAAAAAGAATACCATGACAGGATCATCCTT
ATCAACATTTCACACTCTACATCCCCTGACTTTTTGTATCAGCCActaga
ttttttatttgttaaaacaaGATTTTCTACTAAACGTAGCCAAACGAGGG
TCTTAGGTAacacaaagtttttcaaaaaagtaactTGAAACtagatataa
aatttttttatcaatttgtcTGTATTGTATTGGCTACACCAGTACTTTCA
TCTTGACCATTTGTGATGATTAATAgcggtacac
Run BLAST on NCBI

transcript from alignment at sc0000314:103547..113092-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018988 ID=TCONS_00018988|Name=TCONS_00018988|organism=Clytia hemisphaerica|type=transcript|length=9546bp|location=Sequence derived from alignment at sc0000314:103547..113092- (Clytia hemisphaerica)
TTCACAAACTTGCATAATATTAAAACAACAGCATGAATTATCTTTAAGAA
TGACAATAACAAAATCTCTATTATCTACACATCATGTCAAATACCCTCAT
GAGGAGAGGAGAGATGAATGGAATAGAAGTTGCTCGCTCAGGTAAAAGAC
TTAATTAAGAGATATTCTAAGAAAGTTCAGTCTGACAGGAAAAAAAAGGC
AGAAGGGTTGTATTTTTCTGAGAAATCTTTTCTTTTTACCAATACAATCT
AATACAAAGAGTCCCCTCCTGCCCAGTTGGCGACCGATCTAATTGGCGAC
CGAACGTCTTTAAACCCAGAAAACTCATACAAAAACAAACCTCTGGAGAA
TTTCTTTTGGTAGTTATATATGCCTTGACCTATTTCCCATACTGTATACC
AGGCGCCTGCGCTCGATAGGATCGATCATCGGAACGGCTCGATGACGGAT
CGATATATGATCGATGGATTACTTAACGATCCGAATAGGAGAGATCGTTT
GGTTTTTTGTACAAACCTCTGTATAAACTATGGGCTAGCAACCAGTTGCT
AAGATATTGGCTTGAAATTGAAAATTAAACCACTGAAAACAAAAATAAAA
TTTTCCCGCACTCTGAATCCCATGACCTTGATATATGACAGTGAGGCTGG
AACTTCGATTTTTGAGGATTATGATTTTATTTACCAGTTTTTTAGCGATT
TTTGCCTCGCTAGCCCAAATCTCGCAACCTCTTTACTAGAGTTTTTCAGC
GTTCCGAAAAAAACGCATAGCAGAAATGTTTTCATCTTCACAGGATCGTT
TCTCAACAACAAAATACATCTTTTAGTCTTTGGGTTTGTTTCTGACGTTT
TTTCTTCAAAGAATATCGATCACTTTCCTTTTCCCCTTGAGCGCGCGAGA
AAAAAATTATTAGCTTGTTTTCGTGCGGGCAAATAAAGATGAGGCGGCAA
TCTTGCACTGAGGGTGCTACTTAGTTTCCGCCCTATTTTGCGCCCACGAT
ATAATGGTCCAAACACGGGGGTAGTCCAAATGATAAACTATGTCGTTCTG
TAAGTGTTTATTTTCTGAGAGATACAAATAGTATATTTGAATATTATTAA
CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGAACTCCCATAGGAATTCCGATACCTA
ACCCGATTGGTTAATTTCGGAACGGCTTCAAGAAAGTCATAATGGCAGAT
AATTTTAAAAGTTTCTGAGGGAATGTGAGAATTTATCGATGTTGATGGCT
TGTTGATTCTTTAAAGAAAAAAGATAACAGGTATAGCTTTTTCTAATCCT
GGAATATCTAGGTTCCAGCTACACTGTATGAGTTTGAGTCTAAACTGATA
GTGCACCTTACAGAAGCACTCTTAATAGAAGAGACCGCATTCTCGTTTTA
GTTCTAGTTGCAGATTTTTATTTGAAAATCACATAAACTTAAAGAATATT
TATGAAGAATGTGTTTATGTGTCGACTAATGTAGTCACTATATTTGTTGA
AATAGGAAATAGAACAGAGGTAACTCCAGCCTTGCCTTCAAATTGTTAGC
TGTCAGGAGGTGTTGAAAGAACTGAAATCTTATTTACATCGAAATGAAAA
CACATAATTTAATGATAACTGTTTGTAGAATGCACTATTTTGAGTTAAAG
AAAAAGCAGCAAAAATTTTATGCAATGGCTCCAAAAACATATGAAGAATT
GGGCTTGCAAGTTCCTTATCTGGTAATATCCATGTAGAAATTTTCTTCTG
ACACACCAAAGCTTTCAAGATCAGGCAAATTGTCAACATTGTTTAGGTTA
CAGAATTCTGCCTTGTATCGTCACACAGTTTACAGTTGAATTCTGTAGTT
GATCCTGACAGTTCATCAAAGGGCGTCAAACATTGGAAAATTGGCCTCCA
GGTTGATAAATTTTTATTTTTTCATTTAGATGAGAATAAGCTCTTAACAC
TGTTTTTTTTCAAGCACCCAAATGCCCCGTTAGATGGTGGCATTAAACTC
AATTTGAAAGAAAATTTATAAGTTTATTATTCTCTTCTACAAGAAAAAAG
TAAAAGATCAAATTTAACCATATAAAAAAGTCTCTCTTCCCCTTTTTAAA
ATGAATGGAACCCATAGTTAGAGTTTAGAGTTTCATCATCTTCTCAATTA
AAAAGAGCTATAATTTAGATATTTTCAGTAATTTAAATAACTTTGATCAT
TTATAAATACTAGGTATATATACATTCAACTTTTGCTGATTCAAAGTGCC
AGTTGAGACAAAATTTGCTTAGCTTTTGGGGGCTCAAGGCGCCCCCCCAG
CCCCCAGTCTCTGTTACCCAGCCTTCGGCTGGATAGTGCGGCTTACGCCT
TTGTTAAAAACTCAATTTGAAAGTATAAGCGGAGGCATTGCTTAGTGCTT
GGAAAAACCCCTGCCTTATGTGTTGTTAATACGCCCTAAAGCGTTGACAG
TTAAGCTAGGCTAACTTAGCTCTTTGCTCCTTCCAAATTCAAGAATACAA
TGCTTAAATTAGTTGACACATAAAACATGTTATTCAAAAATATTCCCCAT
GCAACGTTTATATCGAAATCTGCAAGACAATGAAATTGATCTTTTTTACT
CAGTACTTCTGTAGAAGTTTTTTTAAATTTCAACCAATTTGTGCTGCATT
AATGATAAAGGGGGCCAACTGGCCCAAATCTTTTGCGCTAATGGCTTTTC
TGAGCCTTGGGTGGTAGGCTGAGCCTTAGATGACAGGGTCCTGCTTTGGA
TGATAGGTGATCTTATAACTGTCACCCTATTTTTAAGCATCATCTTTATT
TGTTTCAATCGGTGATTCTAAGGGTTGAATTTTTTTGTATCTTAAAAAGT
TTTCAAACAAAAGTAGGAATTTGATGGGAGAGTTACATTGTCAGCAAATC
TGTTCTGATTGGATGAAAGTGCTTAACCTTTATTTGATTGAGTGTTACTT
TTTTTAGGGGGTAATGAGCTGATTGATATGTGCTGCCCAAATTTTGATAT
CTTTTAGCCCTATTAGCCCCAGGGTGGAGTTCTTTTGTGTACATCTCAGA
GGAAAATTTTGAAATGACTTGAAACTTTCTGACTTTAATAAAATCCTATT
GCAAGTCTTATTAAAGGGTAGCCTTTTGTCTTTCAGAATCTTCAAACAGA
ATCTAAATATCTTTAGTGGTTTGACTGTTGTAGACATTTTTGTAAACCAT
GTATTTTTCCTTTTTTCTGAGGTTGACATTTTGTGATTTTTTTCTTCCTG
GAAATTTGTGTCATGATGGAGAACATTTGTACCAAATTTCATGACCATAG
CTGTTATGTATTATGGTTGATCGACTGTTGTTTTGTCGTTTTTTACTACT
TTATAGAGTTAACCAGCAATAAACTTTGTTTGATATCTTTTGATTGAATT
ATTATTTTTGAAAATTTTTTTGACAGTGATGATGATCTAAGATAGAAGAA
TCACTCCTATAAAAATGGTAATTATACCACATTTCTACAAGAAATTGATT
TTTTTCTTCTTCATTTTTCATTTTCATTTTCCATTTTTTTTCCAATTTTT
TTACTTGATAATATTCTACTCATGAATATCTTTTTAACGAGCACAAAATC
GTAACTTGATTCGAATTCTATCAAAAGTTACAGCCATTTTTGTCTCCAGC
TGCAAATTATTTTGAGACAGACTTTAGCTATCATGTTTGCTTACTCTTAT
CCTGAGGTATTAGCTTCTCCATGCTACAATCGTTCACTAAATATTTGAGA
CAAAGGGGAGTTCCCGGTGTAATTTTGAACACCACAATTGATTATTAAGT
GCCTTAAACTACAGTTGGAAAGTAGAGTTTTAACTCTTAGTTTTAACATG
AGACTTAAGACTTAATGATCTTAGGATTTAAAAGCTCAAATTTGCTCGAA
TGAAGTACACTAAAATCTCAATATATTTCGAGGGACATTGTAGCACAAGA
AGGGCACTCGCATGAGAAAAGCTTTGTTTTTATGCTATAAAAATGGTGGC
TATAAATAAAAACAATCACATTTGAAAAATATAGCAAAAGATGATGTGAT
GGGAAACAAAAGAAACAAGAGAATCGGATGGGGAAACTGGGTGCTGGGGT
AAAAAAAATGAATAATTTGAAAATTTTGAAATATTCAATTTGGAAAATAT
ACACAGCCCAAAGAGCCTCAATCAAAACAGCTAGGTACCCCCAATTAATA
GGTAGCCCCAAAGAATTGCAAAATATTAGCCCCAATTCCTAACCTGGCCT
AGGTGCCCTTTAGATTTCTAGGGGGCTGAAACCACGGTTCTGGGGATACA
AAAATCAAGAAAGCTTGGGATTAATAGGGTTAAGGAGCAAAAAGTTGAAA
TTTTCCTAATTCCCTGACCCTTTGTTTTCCATACCCAGATGATTTCAAAA
ACATGACTTTATCACAGTCATATCATTTGAAGTATTTCAGATGATGATCT
TACCAGTCGAACCAAATCAAACGCAATCAACCAATTGATATTTTATTGCG
TTTGGTTGAGATTCTATTGCGTAAATTTGGTCATGAAAGAATTTCTGGAA
TACAAATTCCTATGACGTCACTTTGATCTGCATCATTTATACAAATCATT
GTGTCATTTTGTTAAATAGACTATATGGCCCTCTCACTCGGATAATAATA
TGTAATTTTAAATTAACAAAAATTTGATTAAGAGTGAAACAGGAGACCAG
ACCTACATCACCTCCATTTTAGCTATAATTCACAAATTTTCAACCAAATT
CCATTTATCAAAAACATTTGAATTTTGTTGTTATTAGAAGTTACTATTTT
TGCTGTGTCTACTGCCAATCGTATCTAGACTAATTTCACCTGCCTTCACC
TCATTGTTTTCAAAGATTTAGTCTCCTGGTATCACACATTATTGTCGAAA
CACACAGTAGAAAATTGTCTCTTGGAATTATTACTATACACTCAAAACTA
AATACTAGTTTTCAGCTATAACTGAGGAGACTGTTATTCGATTTTGATTT
GGTCAATAATTCAGACAGTTCTCATCAAATATTGTATTTCCAACTGTTAC
GCAATATTTTTCTCTTGTTATTTTAGTAGCCACAGAGTACATAAAAAGAT
TATAAGAAACAAACACTAATTTTCTGGTTTGTTGTTTTAGGTTGCATTTA
GTGGAGTGTCTTATTTTTATCACAACACTTTTGCACGTGATTGTTTCTTC
TTTCATAACTTTTACAATGTCTCATCATTTTATGTAACAAGTTTCACATG
AATTATTAAATTATTTGTTTATTCTGTGTTAAAACAGCTGAAAACAGGGG
TGTATTCAGTCAAGTAGAGAGTTTAGGTAAATTTATTATTCATGAATATT
TTATGAGCACTAGATAGTCCATGTAAATATTCAAATCTAAATTTATTGAA
AAACNACTAGATAGTCCATGTAAATATTCAAATCTAGATTTATTGAAAAA
CTTGAATTAGGAAAAGTTTTCACCTCTATCATTGCATAACATTGTTAATT
TCATAAACATATTTTTCAGGATTGTCAAAGGTGTAGGGTAGAAATCTTCG
ATAGAACCTGATATAAGACCTAACAAAAAATTTCATTGGACATTGCTTTC
AGTATTTTATCAAAGTTGTTACTCTTTTGCCTCTTTTTCGTTTTTATGAT
AAGCTTTTTAAGATTTCAACTCACCACTCCCCTATTTTTATCTTACTTTA
TTTTTATTGAACCTTTCTCTTAGTTTTAATCAGACTTTCTTCTGTTTTGT
TCTTCTCACTTTAACGGAATCATTTATTCTACTCTACCTTGTCTTTTCGT
CCCTCACTTTACATAGAGGCCTACAACGGAGAAAGCTGTTTGAGTTTTAT
TTTAAAGGACAAGCAAAAAGTGTATTATGATCATAACTTGTGACTTTAAC
ATTTTTTCTTGGTTGATTGTTGCTGGTGTATACTTCAATGGTATTATCAA
GAATGGCTTTCCTTTACAGGGTAGTTTAATTATAATATGTAAGAAAATTA
TTTTTCAGCACAAAATATTACAATGAATTTCCCAATCGCCCCAATAGTTT
TCTCCTCATGTGGATCATTTCTTGGCCTTGCTTACTTATTAAAAAAGAAG
TCATTTCCAAAGTACTTGAAGGATCCTGGTAGAAGGAACGCATGGTTGTG
GCGAAACACATTTTGCTCTTTGATTCACTCGTGTGCATCTGCTGTGTGGA
CCTTTTTCTGGTAAGAAAAGAATGTCTTTTATGAAGTATCACCACTCTAG
ATTTTGCCTTTTTCTTTGGTGAATCATCACACAGTTTACACCATGACAAA
TAGCTACAAAGGGTAGGAGGGAAAGTATTNCATTCTCTTTGGTGAATCAT
CACACAGTTTACACCATAACAAATAGCTACAAAGGGTAGAAGGGAAAGTA
TGATTATACTATTAATTTTCTTTTGAATTTTGTAGTTATTATGATGAGCC
AAAACTATTGGGCGATATGGTGAACACAACAACGAACCTCTCAATACAAC
TTTTGTCCTTTTCAACAGGTAAAATTCAGTCAGACTAAATAATCACTTTC
AGAAAGTAAGTTTCCAAATCATGGCAAATTATACAGTACTAGCCGGTACC
CGGCGTCGCACGCCGGTTAAGCTGTAGCTGAACGCACTAAAAGTCCTTTG
GATGTTGAAGCTGGCTTAAAAAAGCGATCGAAAAAAAAGAAGAAATCTCT
ACAACGTTTAACTCTAACCTTCCCCGGGTGTCTTATCTTTTAACCATATT
TGGATCGTGTACTGTCCCCCCCCCCCGTGACATTTAATTTTTTGTTTAAG
TCAAAAGTTATAAAAAAGCATCGTTTACTGTACCAGTGTCGTTTGAAATG
ACTCTGCAGGTAGTTATTTTTCTCGCTTCACTCGCGTTAAATATGCCGTC
CAGTTTAAATGACAATTTTTCAGGAAAAAGTGGGAAGGTCACAAAGAATA
GTGCAACTCTTTGTTTTTTATCAGATCGAGAAAAAAATAAGACAATTTAA
AGTTGCTTTTTTAATCCCTTGGCATAATTTTTCGAATTTAAACATAAGAA
TGACAAACTAAACGACGACTTGAATATTTTTATAAGAAGAAAGAAGTGAA
CTAATTTTTTCTTATGCTTGATATCGTCCTTTGAATGCTGTTGTTGTCCA
CAAACTTTTTGATTTTTATGTTTTGATTTACTTTTGAAATATTCTTTTCT
ATGAAATGAAATTGTTTTGTTTTGAAAAGAATTTGAATGTCATTTATAAA
TACGATCGTTAAATACATTCGAAAACATTTAAAACAAAAGAATAGAGAAA
AAGACAACTCTGTGCAAAAATTGAAATTACTAAAATGTAGATGGGCCTTA
AATTTCAAAACAAAGGCTGAATAAAGTCCAAACCAAGCTCTATCCGATCT
TTTGCAAATGGCGCGAATCCAATGGAACAAATTTGTGGAGCAAGAGACTA
AAAGTCATAATTTTAAAACACAAACAAAGCGAAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTCTTTTGCGAATGGCGCGAATCCAATAGAACA
AATTTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAAG
CGAAAGCGAAAACGAAAGTGACACACAGACACACAAAGCACCGCTATTAA
TATATAGATTAAAAGTTCTTCCCTCTCAGACGAAGGATTTCCTTCTAAGT
GAAGTATATGAAGAGGCTTTTACGTCTCAAAATTTTGCATCGGAAGTTTA
AGAAGGCTAATTTGCTGTGTTGTTGGATTTAATTAGTACTTGTAACTATT
TTTTATTACCAACATTAAATAAAGAACAAATAAAATAATAAATGTGTAAA
ATCCATTTTCCGTCTCAAACGAAAAGCCCTGCTTTAACCACTGATTATAC
CCAAAGTCGTACTAAAAACATTTCCATTGATAGTAACACGTCCAATCATT
ACTATCAAAAAGTCTATTAATATTTTTCTTGCATTTTTATAGGTTATTTC
ATGTATGATTTTCTGGATGTTGTTCTGAATGATGGCTTTCGACAAGTCTT
TATCCTTACTCATCACACAGCTGTAAGTTGATGTCGATGATCCTTCTATT
GTACTGTAGATGTTTTTTTTTGCTTGAAAGCTCTGTTTACTCCACTTGGA
CACTTGTGTTTTTTCAGTGTTGCAACTAAACGGTCCAGTTAAGATAAAAC
ATACTATTTCCTTTTTCGTCTTGCCAATAAGAGCGTTTTTGGGTCAACAG
GACTCACAAACCAAAGATTAATTATATTCATGATATGCACCACTGGAGAG
TCTTCTTAGAACTTTTAAAATTTTCCATCCAATACGTTACTTAAACAATA
GAAAAAGTGACGTACGTATTGGGATGAACAAAAATAGAAAAGTTGCATAG
TTTCACGAAGTCATTGCAGTGGTGCATATCATGAATACCTAGTTGCAATT
CTGATCTTTCATGTTTTACTTTTAGAACGAACTCCTGCTGAAGTTTATTT
ACTTCATCTTTTCAACTCTTATTATTCAGGTAATCACTGCATTCTCGTTG
GCACTCACTAATGAACGTTACATGGGTTTTGGTGTGTGTGCTTTGATCAT
GGAATTCAACAGCATCTTCTTACACATCAGACGTTTGATGAAACTTGTCA
ATCATTCATCTGGTTGGAAAAGCATCAATGGGGTTTTCTTATTGCTAACA
ATGCTCTTTTGTCGTATCTGCTTATCCTGTTGGATGGTGAGATGGCTTTT
GCAGAATAGAGACTTATTACAATACAGCCATTATGTTGTTGGGCTGGTTG
GCATGGTGATTATGACAGTCACCAATGTGGGTCTCATGTACCGTCTTTGG
ATGTCTGATTTCCATAAGAAATCAATCAACAAAAAAGTGCTTTCAGAAAT
CAAGAAATAACCACTACCTCCTCCATCACATATTATACTTCACAGATGTC
ACTCACATCAATGAAAGTACCTTTATTAACATCAACTTTCAATTCTGAGT
AACGAAGGGAACGGTTCAATATGAGATGACCACAAAAAGAATACCATGAC
AGGATCATCCTTATCAACATTTCACACTCTACATCCCCTGACTTTTTGTA
TCAGCCACTAGATTTTTTATTTGTTAAAACAAGATTTTCTACTAAACGTA
GCCAAACGAGGGTCTTAGGTAACACAAAGTTTTTCAAAAAAGTAACTTGA
AACTAGATATAAAATTTTTTTATCAATTTGTCTGTATTGTATTGGCTACA
CCAGTACTTTCATCTTGACCATTTGTGATGATTAATAGCGGTACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010645XLOC_010645Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018988-exon-sc0000314-1575043694:112952..113092TCONS_00018988-exon-sc0000314-1575043694:112952..113092Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1575043694:106633..106795TCONS_00018988-exon-sc0000314-1575043694:106633..106795Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1575043694:106325..106407TCONS_00018988-exon-sc0000314-1575043694:106325..106407Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1575043694:104771..104850TCONS_00018988-exon-sc0000314-1575043694:104771..104850Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1575043694:103547..104313TCONS_00018988-exon-sc0000314-1575043694:103547..104313Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1510915933:112952..113092TCONS_00018988-exon-sc0000314-1510915933:112952..113092Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1510915933:106633..106795TCONS_00018988-exon-sc0000314-1510915933:106633..106795Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1510915933:106325..106407TCONS_00018988-exon-sc0000314-1510915933:106325..106407Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1510915933:104771..104850TCONS_00018988-exon-sc0000314-1510915933:104771..104850Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1510915933:103547..104313TCONS_00018988-exon-sc0000314-1510915933:103547..104313Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1491911889:112952..113092TCONS_00018988-exon-sc0000314-1491911889:112952..113092Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1491911889:106633..106795TCONS_00018988-exon-sc0000314-1491911889:106633..106795Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1491911889:106325..106407TCONS_00018988-exon-sc0000314-1491911889:106325..106407Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1491911889:104771..104850TCONS_00018988-exon-sc0000314-1491911889:104771..104850Clytia hemisphaericaexon
TCONS_00018988-exon-sc0000314-1491911889:103547..104313TCONS_00018988-exon-sc0000314-1491911889:103547..104313Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:103547..113092 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.32111	11.7437	14.2267	22.3333	15.7435	12.6728	13.9987	0.0182355	4.24283	0	0.550134	3.65111	0.000462618	0.0127268	1.74733e-07	1.89374	9.84669e-06	0	0	2.61378	0.0380561	0.0212402	1.08241	30.4172	19.6814	7.62166	0.000872786	1.39319	0
Blast
[Close]
BLAST of TCONS_00018988 vs. Swiss-Prot (Human)
Match: TLCD1 (Calfacilitin OS=Homo sapiens GN=TLCD1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.191e-16
Identity = 65/227 (28.63%), Postives = 113/227 (49.78%), Query Frame = 3 
Query:  159 SFLGLAYLLKKKSFPKYLK-DPGRRNAWLWRNTFCSLIHSCASAVWTFFCYYDEPKLLGDMVNTTTNLSIQLL-SFSTGYFMYDFLDVVLNDGFRQVF-ILTHHTAVITAFSLALTNERYMGFGVCALIMEFNSIFLHIRRLMKLVNHSSG--WKSINGVFLLLTMLFCRICLSCWMVRWLLQNRDLLQYSHYVVGLVGMVIMTVTNVGLMYRLWMSDFHKKSINKK 824
            +F  L   L +   P +++ DP R   W W N   S  HS  S +W   C +  P +L + + T  +LS  LL  FS GYF++D +D+V +   R  +  L HH   + AF   +    ++G GV  L++E ++IFL IR +MK+ N      ++    V L++  LF R+    ++  + L+  +      +++G+  ++++ V  +    RL  SDF  + + KK
Sbjct:   18 TFRALRRALCRLPLPVHVRADPLR--TWRWHNLLVSFAHSIVSGIWALLCVWQTPDMLVE-IETAWSLSGYLLVCFSAGYFIHDTVDIVASGQTRASWEYLVHHVMAMGAFFSGIFWSSFVGGGVLTLLVEVSNIFLTIRMMMKISNAQDHLLYRVNKYVNLVMYFLF-RLAPQAYLTHFFLRYVNQRTLGTFLLGI--LLMLDVMIIIYFSRLLRSDFCPEHVPKK 238
The following BLAST results are available for this feature:
BLAST of TCONS_00018988 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLCD11.191e-1628.63Calfacilitin OS=Homo sapiens GN=TLCD1 PE=2 SV=1[more]
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